ClCG05G009720 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCCTCCTCCTCCTCCTCCATTTCTAATCTCTGATCTGAACCACAAACCAGAGAAGGTTTGGTGATCGGACACATCATGCGCCGGGAAATTGTATTGCCGTTGTTCTTGCTCTGTTTCTTCGCCACAGATCTTTTTCCAATTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTCGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTCAATTTTCCACATTAAACCCTTCTTTATTTTTGTCTTATCATTTGATTCTTCGCCAATGCTTCTTTCATTAGTGCCTTGGAGTTTTGCATTTCAAATTTCTTGATTCGTTAATTTGTTTGATGGGTTATACCAAAAAATTGATATGCTTAATAAAATAAGCCCGATGGGTACGATTGGTTCTTGCCTTGCTATTTATTTGTTGATTTGTCTCTCCCGTTTGGTTTTGACCGACCAGTTGCGAAATGTAGAGAACTATGATCTATTTCTTGTGGGTCTTCTCCTTTTTTCTTTTCTTGGAGATAAAATTTCATATTCACAATGATTGAATTAACGGGCCAAAGGATTTTTCCGGCTATGCTGATTTGTGGAAATCCAGTGCGCCAATGGAATTGTACTTTTTCCTCTGGCTTGTTGCTCGAGAAAGCAAAACTCTGATGTTCTTACGACCCTCTAGGCTTTTACCGTTGCAGTGAGATGAAAGAAAGAGATCAATTCTGTGAATAACATCTTTTCTTTACTGTTATGGAGGCTTTTTGTCCAATTCTAGTTTGTTTGGTTTCTGATTTTGGCTGTTTCAAAACATTTGAGGAATAGTTTGCGGATTAATTTCAAGGGGAAGAGAAATACCTTGTGTTAGATGATATGATATTAAATTTACCTTCGTCTATCAGCTTAAACTTTCCGGTCAATCGGCAATTTAATACCTTGGGAATCTGCTGCTGACCCACATATCATTTGGTTTTTGCAAATCGTTTAAAAATTCTTCATGTATATGATTTCTAGTCTAGTGATTGTTTGGGAGGACGTTTCATGAGGAGGGTGATGAAAAGTTGAATCTTGATCCTGGGGTGTCTTTTTTGGTCTTGGAAGGATCTTCTCCATGATGGTCATGATGATAAAATTCAAATTGGAGTGTTCTCTTCGCACACACCATGCACCTGATAACGATTTAAATTGGATGGCAAGAATTTAGGAGTTTAGCTCTCTTTTCCATGTCCTTGTACAATTGCTTAAAAATTACTTGTCTTTTAATGGTTTAAACTCTAGATTTTGCAAATGAAAAGTCTTATCAAAACATTACTACTCTTGATGTTACTGACACTGACAGATCTTTATTTACAGTTCAATTTGAGTCTCTAGATGAAATGTTTTGGCCATTTCTTTGGTGGGTTCCATTGAGGGGTTGTTTCTGAACCTATGCATCCCTGTTGGACATCTTTTAAAGGTCATTGCTCTTAGAAAATAAGCTTGGTCTGCTATTTCTTGGTTTTAAGTTTCAACTAATTTCTCTTCGACCCCTCAATCTAAGACTTGAACAACTCCTGTGGAAGTTTAGACTTAACCGTGCTTCAGACCATTTGATCTGTATTGCTGATAGAGTCACTGTTCATGGAGAGTTGTAACTTGTAAACAACCAGGACAGCTGCACTATATATTTTAGGGTAATTAGCCTGTCCATTGGTTGTGCCTGCTTTTAAGCAATTAACATCTGTCATTTGGTCATGAAACGATTTGTCTATTCAATAATGTCCAACATATAAACAACAGGGTATACAAAAGATGCTTCCAATTTGAAAGAGAAACTATGGCTCTTGATGGCCTCAGGCCTGTATATCTTTACACCAAAAAAAGCATTGATAATGGCAGATTCGAAAACTTGTCGTGGAAAATTCTTTGCATTTCGTTCTTCTCAAAACTTCCACAAAATCCATAACTTTTAAAGATTGGATTAATAATCTTGTAGAGTTTTGGTTCAAATCGATGTTTTTCCTTAATGTGTGGAAAGATTCTCATTTCAAGTTGATGGGTAGCTTCCCCTAATGTCTTGATGTGTGTTGTTTTGCTTTACTGATTGATGGTGGGCTCCTTAGGTGACATCTCCGTACGGTAATAATCTTCATCACTCGGAGAATGTAACACACGACCAGTTTGCATTTACGACTAGTGAGGCTGGTAATTACCTAGTTTGTTTCTGGTTGACTGACCACAAGCATCAAGCTGGTGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATCGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGTAACTACTTCCTCTTCACCCTTCCACACTTCACTACAACCTGAAACATCCATTCTAATGCCCAACCTCGTTCTCATTTAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCAGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGGTAACCAAGTTTCCATAGTAAAACTGGATGCTTACCAAAATCTAGCCATTATTTATATAATTTTGGATCCTTACAGAGAAGCAGATATGAGGACAGTCAGCGAGAAGACAAACGCACGAGTTGCGTGGTATAGCGTCATGTCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAGAGTCTATGTTCTTTCAGAAAGAGAATTTGTTAACTTATTTAGTTTTATTTCCTCATACGAAGTAGAGAAGTTTTGACACAAAACTGCAAACCATGCAGGTTTGTTTATAATTTTTATTTCTTATTTTGTTTTTTTCTCTTTTGCTTTGAAGCTGTGATAGAATTTAGTGAATTTTGATTCTTGAGATTCAATGTTCATCATCCTTTATATGATTAGGGTTCTTAGAGAAACTGAAGGTCAAGGGGATATAAATCATACCATAATTTGATCAAAATGTGACCACATAAGAA TCCTCCTCCTCCTCCTCCTCCATTTCTAATCTCTGATCTGAACCACAAACCAGAGAAGGTTTGGTGATCGGACACATCATGCGCCGGGAAATTGTATTGCCGTTGTTCTTGCTCTGTTTCTTCGCCACAGATCTTTTTCCAATTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTCGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTGACATCTCCGTACGGTAATAATCTTCATCACTCGGAGAATGTAACACACGACCAGTTTGCATTTACGACTAGTGAGGCTGGTAATTACCTAGTTTGTTTCTGGTTGACTGACCACAAGCATCAAGCTGGTGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATCGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCAGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGAGAAGCAGATATGAGGACAGTCAGCGAGAAGACAAACGCACGAGTTGCGTGGTATAGCGTCATGTCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAGAGTCTATGTTCTTTCAGAAAGAGAATTTGTTAACTTATTTAGTTTTATTTCCTCATACGAAGTAGAGAAGTTTTGACACAAAACTGCAAACCATGCAGGTTTGTTTATAATTTTTATTTCTTATTTTGTTTTTTTCTCTTTTGCTTTGAAGCTGTGATAGAATTTAGTGAATTTTGATTCTTGAGATTCAATGTTCATCATCCTTTATATGATTAGGGTTCTTAGAGAAACTGAAGGTCAAGGGGATATAAATCATACCATAATTTGATCAAAATGTGACCACATAAGAA ATGCGCCGGGAAATTGTATTGCCGTTGTTCTTGCTCTGTTTCTTCGCCACAGATCTTTTTCCAATTGCCCATTCAATCTGGTTGAACTTGCCTCCATCTGGGACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTCGTTCTTGCCGATTATGTCGTCGTCGCCGATCATACTCACTCCCCCACCATTTCTGTCAAGGTGACATCTCCGTACGGTAATAATCTTCATCACTCGGAGAATGTAACACACGACCAGTTTGCATTTACGACTAGTGAGGCTGGTAATTACCTAGTTTGTTTCTGGTTGACTGACCACAAGCATCAAGCTGGTGTTGAGATAAGTGTCAACCTTGACTGGAGAACTGGGATCGCAGCCAAGGATTGGGAATCAGTTGCAAAAAAAGAGAAGATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCAGTCGAAGCTATCCATGAAAATCTACTCTATCTCAAGGACAGAGAAGCAGATATGAGGACAGTCAGCGAGAAGACAAACGCACGAGTTGCGTGGTATAGCGTCATGTCCTTGGGTGTCTGCATTGTTGCTTCTACTATACAGATATGGTACTTGAAGCGATTCTTTCAGAAGAAAAAACTTATTTAG MRREIVLPLFLLCFFATDLFPIAHSIWLNLPPSGTKCVSEEIQTNVVVLADYVVVADHTHSPTISVKVTSPYGNNLHHSENVTHDQFAFTTSEAGNYLVCFWLTDHKHQAGVEISVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLLYLKDREADMRTVSEKTNARVAWYSVMSLGVCIVASTIQIWYLKRFFQKKKLI
BLAST of ClCG05G009720 vs. Swiss-Prot
Match: P24D3_ARATH (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana GN=At1g09580 PE=1 SV=1) HSP 1 Score: 308.5 bits (789), Expect = 5.5e-83 Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of ClCG05G009720 vs. Swiss-Prot
Match: P24D4_ARATH (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana GN=CYB PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 8.0e-74 Identity = 132/213 (61.97%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of ClCG05G009720 vs. Swiss-Prot
Match: P24D5_ARATH (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana GN=At1g21900 PE=1 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 2.4e-70 Identity = 135/207 (65.22%), Postives = 160/207 (77.29%), Query Frame = 1
BLAST of ClCG05G009720 vs. Swiss-Prot
Match: P24D6_ARATH (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana GN=At3g10780 PE=1 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 3.9e-52 Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 1
BLAST of ClCG05G009720 vs. Swiss-Prot
Match: P24DA_ARATH (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana GN=At1g69460 PE=1 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 9.6e-43 Identity = 86/199 (43.22%), Postives = 128/199 (64.32%), Query Frame = 1
BLAST of ClCG05G009720 vs. TrEMBL
Match: A0A0A0L744_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214030 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 1.3e-110 Identity = 197/212 (92.92%), Postives = 205/212 (96.70%), Query Frame = 1
BLAST of ClCG05G009720 vs. TrEMBL
Match: A0A061DY43_THECC (Emp24/gp25L/p24 family/GOLD family protein isoform 1 OS=Theobroma cacao GN=TCM_006390 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 1.2e-87 Identity = 161/209 (77.03%), Postives = 181/209 (86.60%), Query Frame = 1
BLAST of ClCG05G009720 vs. TrEMBL
Match: F6H957_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01440 PE=3 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 2.2e-86 Identity = 161/210 (76.67%), Postives = 182/210 (86.67%), Query Frame = 1
BLAST of ClCG05G009720 vs. TrEMBL
Match: A5AQJ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039788 PE=3 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.1e-85 Identity = 159/208 (76.44%), Postives = 180/208 (86.54%), Query Frame = 1
BLAST of ClCG05G009720 vs. TrEMBL
Match: A0A0A0KHR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G411260 PE=3 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.4e-85 Identity = 158/211 (74.88%), Postives = 183/211 (86.73%), Query Frame = 1
BLAST of ClCG05G009720 vs. TAIR10
Match: AT1G09580.1 (AT1G09580.1 emp24/gp25L/p24 family/GOLD family protein) HSP 1 Score: 308.5 bits (789), Expect = 3.1e-84 Identity = 148/213 (69.48%), Postives = 175/213 (82.16%), Query Frame = 1
BLAST of ClCG05G009720 vs. TAIR10
Match: AT1G57620.1 (AT1G57620.1 emp24/gp25L/p24 family/GOLD family protein) HSP 1 Score: 278.1 bits (710), Expect = 4.5e-75 Identity = 132/213 (61.97%), Postives = 170/213 (79.81%), Query Frame = 1
BLAST of ClCG05G009720 vs. TAIR10
Match: AT1G21900.1 (AT1G21900.1 emp24/gp25L/p24 family/GOLD family protein) HSP 1 Score: 266.5 bits (680), Expect = 1.4e-71 Identity = 135/207 (65.22%), Postives = 160/207 (77.29%), Query Frame = 1
BLAST of ClCG05G009720 vs. TAIR10
Match: AT3G10780.1 (AT3G10780.1 emp24/gp25L/p24 family/GOLD family protein) HSP 1 Score: 206.1 bits (523), Expect = 2.2e-53 Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 1
BLAST of ClCG05G009720 vs. TAIR10
Match: AT1G69460.1 (AT1G69460.1 emp24/gp25L/p24 family/GOLD family protein) HSP 1 Score: 174.9 bits (442), Expect = 5.4e-44 Identity = 86/199 (43.22%), Postives = 128/199 (64.32%), Query Frame = 1
BLAST of ClCG05G009720 vs. NCBI nr
Match: gi|449464482|ref|XP_004149958.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3 [Cucumis sativus]) HSP 1 Score: 407.1 bits (1045), Expect = 1.8e-110 Identity = 197/212 (92.92%), Postives = 205/212 (96.70%), Query Frame = 1
BLAST of ClCG05G009720 vs. NCBI nr
Match: gi|659112137|ref|XP_008456081.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Cucumis melo]) HSP 1 Score: 401.7 bits (1031), Expect = 7.7e-109 Identity = 195/212 (91.98%), Postives = 205/212 (96.70%), Query Frame = 1
BLAST of ClCG05G009720 vs. NCBI nr
Match: gi|590683032|ref|XP_007041501.1| (Emp24/gp25L/p24 family/GOLD family protein isoform 1 [Theobroma cacao]) HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87 Identity = 161/209 (77.03%), Postives = 181/209 (86.60%), Query Frame = 1
BLAST of ClCG05G009720 vs. NCBI nr
Match: gi|225448026|ref|XP_002272994.1| (PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Vitis vinifera]) HSP 1 Score: 326.6 bits (836), Expect = 3.1e-86 Identity = 161/210 (76.67%), Postives = 182/210 (86.67%), Query Frame = 1
BLAST of ClCG05G009720 vs. NCBI nr
Match: gi|147856607|emb|CAN82472.1| (hypothetical protein VITISV_039788 [Vitis vinifera]) HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85 Identity = 159/208 (76.44%), Postives = 180/208 (86.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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