Lsi04G011080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G011080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ubiquitin-conjugating enzyme E2 variant 1A-like protein
Location	chr04 : 14045809 .. 14050420 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATCTGTTTGTTTGCAGTTCCTCGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGAATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATGTGAGTTTCAACTTTTCAACTTATGGGTTGGGACCTTTTTCTTATTTGCATGAATTTGGGGTATTCAATTCAAGGTTGAAGTTGATCCTGTCATTGAGTTCTCTGAGAAAATGGATTTATTTACTCCTAAGTTGCATTTGTTATGAAGATTTTGTCATATTTTTTGGAAAAAAAAAAGTAAGCAAAGAAGATGCGAAGGTTTTAATTATACTGCCGCCTTGTCTGGAATGGTGTAGAACTAAATAAGCTTATGGGATGAGCTATCAGAGTTTTGAATCATTATAATTGGTAATTGGTTTATCTTACCTGACGATAAGTGCCTTTGGTTGCCAAACTTGTTAATCACTCAGTAAAAGACATGCACTCTCTATCTCTCTCCAACAATCTCAACTTTCTTGTTGAAAAGAAACTTTTCTTGGCAATATAGCATGATTATTTTTATTGTTTTTCCTTCTAATTTTATACATTTTCAGATGCCTACAGTTTCCCTCTAGCTAATTGTTTCATTTACAAATTGATGGTCTGATGTTGTATCTATTTAGACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTATGAACTATTTCTCGAGTCATTTAACATTTCGTAATTGGAAATAATGTATGCTTGCTAATATTACCAGGTTGAAAAGAACCTTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACCATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAACAGGAAGTTGGCTCAGCCTCCTGAAGGTGCTTATTTAGATTTCCAATCGAAATTGTTCATAGAATTTCTTAAGAGAAAAGCATCTGTAACAAGATTGCAATGATGAATTTTCTTTTCCAAGTCATATTTTCAAAGGATATATCATCATTTAAAACTGTTTAGTGTTTTAATAAGGTCTTATTGGGACCATTTTTCCGGTTACATTTATATGGTACTCTACTTGCTAGCTCCTAAAATTTGCCTGCTGTCATTTTTTGGTTGGTTTTTTTTTATATGCTCTTTTATATTCTTTTATTTCTCTCCATGAAAGCTCGTTTTATTTTTTTTATTTTTAAAAAAACATTCACAAATTCTAAAAAATACAACACATTTTAAGAACTGTTTTTAGTATTTTAAAACATAACTTCCTAGCCACAGTTTAATTCATCTTTTTACTGCTAGCTTTGGTATGAAGCATGTGTGACATCCGGTTGGGGTAATTTTGGCTCCGTTTGCTAATAATTTGGTTTTTTGTTTTTGAAAATCAAACTTATAAACACTACCTCCACCTGTAGGTCTTTATGTTTATTATCAACTTTCTACTAATGTTTCCAAAAACTAAACCAGGTTTTGAAAACTAAAAAAATAGTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGACTAGAAATTTAAAGTGTTTCTTTAGCAAAGGTGAAACCCATAATTGGAAAATTGTGGATGAAACAAACATAAATTTAAAAAACACAAAGCACAAAATGAAATCATTATTAAATGGGGCCTTAATTATCATTAGTGTATGATTTAGGGATTGAGATGATTGTTTCACGACATTTTTCAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGTATTCTTTGATTCAGGTGAGAATTCAACGCAAGATAATTGCATGACATGATGAATTTTGATGATGGAGGTTGACATAGATAGTGATTGATCCCATAGATCCTTAAGAGTTCGTTTAGATTGTAGATATTGTTTCATGGGTATGGATATTGAATATTTGAGATTTAAGTCTGGAGTTAAATGTCTTATCTATCATATTTTATGTGAAAAATTGAAATTAAATAATTAAATATATATAAAATATCAAAATAGTAATAATAATTGTTTAATACTTTTAATTAATTTTTAAGTTATGTTTTAAAAAGTGCCTAATAGATTCTTTAACTTTCAATTTTATTCTTATTAAGTTCTTGAACTTTAAAAAGTGTTTGAAAGCTTAGGATTCTATTAGACAAAAAATTCAATTTTATATCTAGTAGATCAATTAGCAATGATTTTTTTGGGTAAAAATTGAATGTATCAGGAACTTATTACATAAGATATTGAAAGTTCAAGGATCTATTAGATACAAAATTATAGTTTAGGGACTTATCAGACACAATTGAAAGTTCAAGGATCTATTTGACACTTTTAGTGGTTTAGAGACCAAATAGGTAAAAACTTGAAAGTTCAGGGACTAAACTTGTAATTGAACCTATAGGAAACAAAAACCATTTCACTGATATGGTGAAATGTATACCAAAGATCCTATCATGAGTAATTACAGGAAGCTAGTCCAGTGTTTAATAACGGTAGATAAACTGTAATTGGAAAGATAGCTTACTCCAAGATAAAGCTAAGAAAGGAATAGAGTCAACAAAGGATGAGATTTCATGCTTCGTATTGTTGAAGAGGCGACCATTTCTCTCAATCATAGACTCCAAAAGAAGGCTTGCACGAAATTCAGGCAAAGGGTCTTTTTCTCATCCTTGAAAGGGTGGCAAAGCGTAACACCATAAAGAAGGGAGAAGATGTCAACAGGGGCAGCCAAATTCTAGCCAAAAGTTGACAAGATATAATAGCTCCTAAAGGCATGCAAAGGTACAACTGCTGAAGATATGGATTTGTGTTTCCATATTCTGTATACATGAAGGAGAGAAGGATGGGGAAAGGGATAACCAGGGGGGATTTCTTCTGAATAACATCATGTGTATTAAAAGCTGGAATAACTAAGGTCCCCATATGAAGAATTTAATCTTCTCTGGATACATTCCCCTCCAAATGTGTTTGTAGAAGCCATCAACCAGCACTATTTAACATTGGTGTCAGAGGGAGAACAAGGTTCTAATAGCAAAGACAATGAGGTCCAAACCACAAACTCGTCTTCAGTAATATGGTGTCTGAAGAAGAGGTTCCAAGAATTCTCATTAGACTTTCAAAAGTCAGCTATAGATGCCTCTTTTCTGAGAGATAAAGCATTTAGGGCCACAGTGTTTCTGAAAGATGTCCTGTTTGGCTGTAAATTTCCTAGGTCCATTGGATGAGTGGAGAGTGAGTACTTGGTTTCATACCATAATAGGTGGATCCATATGGATACAATGAATTTCCTACCCTGTTTCATACCTTAAACAGACTATGCTATTAAATGTTTGTCATGAAAATCCATGGCAAAACCCATTAAACAATCACACAAAATATTTTGTCTTTCAAGAGCACATAGGATCTTTAAACCTGACCCCATTGTCATGATATGACTCTTGCGTTTACATGTTGATTGATTAGAATTAAAAGTTCTATTTTCAAATTTGAATTTCCATTGTGCATTGCATGGCATCATATAATTCTAGACAACAACTTATTGAATTTGAAGTTTGAACATATGGAACTAACCTCCTTTGTCTTTACCTATGTATGCTTTGTTTATTAATTATTTCATCAAATTATAAGCATGGTCTCTGTGTGTATTTAGCCCATATACTTTGAAAGGTTCTTAGAGATCTCTGTATTCTCTAGTTTGTTTCTAGTTAGATTTCAATAGGCGTTCAAATTTTCAATTATGCATTTAAAGTCTCTACCATTCATTTCTCTTGAATAGGCCCCATGTGACCTTTGAGTTAAGAGTTTGCACTTCTCTAAAATCAGGCTCCAAGCCTCCATGTGATCTTTTGAGTTATAGAGTTTGGCACTTTCTGTCTCAATTTTGAATAGTAGAGTTTCTAAACTGGCTAAGTTAATAACAAAAGCCTATTAGAAACTTCTTTCTGAGTATAAAGATTAGATAGACAGTAGACAATCATGTAAGTTGCCTATTAGAATCTCTAAAATACATGAGCTTAATAGGCACAGAATTGAATTTGGGGTCTCTGAATAATTCTTATCTTGGATCATCATAACTGCAGATTTTGGCAATGACTGTGGCGTACAGGGAGCATTGGATCGCAGTATGCCGAAGCCTGTACTTCACTTAGCTCCGTTTATAGCTCTTGACATAGCAATTTGAATTTGGCAAGCTCTCAAAAAGCGAGCTTGGTTGTCAGTAAATGATGTCTTATGTGTGGATCAATCTTGAAGTTGATGGATATTCTCAAATCGTCTGCTCAGTGTAAATGAAATTCTATATCAAAGTTTAAGATGAAAATATTAAATGATAATGTACTTAAATAGATCACTTTGGTTATGGGCTTCACAAATGAACAATATGCATATATATTTTTTCTTAGTTCAAAATTTCACCAACTTATCGAGATTATACTTTATGCTACTTCTTTTTGCACAGGAAATAATATTTCTGAGCTCTTTGCAAATG

mRNA sequence

ATGTACATCTGTTTGTTTGCAGTTCCTCGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGAATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTTGAAAAGAACCTTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACCATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAACAGGAAGTTGGCTCAGCCTCCTGAAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGTATTCTTTGATTCAGATTTTGGCAATGACTGTGGCGTACAGGGAGCATTGGATCGCAGTATGCCGAAGCCTGTACTTCACTTAGCTCCGTTTATAGCTCTTGACATAGCAATTTGAATTTGGCAAGCTCTCAAAAAGCGAGCTTGGTTGTCAGTAAATGATGTCTTATGTGTGGATCAATCTTGAAGTTGATGGATATTCTCAAATCGTCTGCTCAGTGTAAATGAAATTCTATATCAAAGTTTAAGATGAAAATATTAAATGATAATGTACTTAAATAGATCACTTTGGTTATGGGCTTCACAAATGAACAATATGCATATATATTTTTTCTTAGTTCAAAATTTCACCAACTTATCGAGATTATACTTTATGCTACTTCTTTTTGCACAGGAAATAATATTTCTGAGCTCTTTGCAAATG

Coding sequence (CDS)

ATGTACATCTGTTTGTTTGCAGTTCCTCGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGAATGGATGATCCAGATGATTTATTAATGCAATCTTGGACTGGGACCATTATAGGCCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTTGAAAAGAACCTTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACCATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAACAGGAAGTTGGCTCAGCCTCCTGAAGGAAATGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGTATTCTTTGA

Protein sequence

MYICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL

Homology

[Close]

BLAST of Lsi04G011080 vs. Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.8e-70
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMMS
Sbjct: 70  CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           S NRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 130 SQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Lsi04G011080 vs. Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 3.4e-69
Identity = 118/150 (78.67%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGK+YP++PP VRFQ+RINM CVNPETGVVE +L PML  W+REYTMEDIL +LKKEMM+
Sbjct: 70  CGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMT 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           SHNRKLAQPPEGNEE R + KG   KCC++
Sbjct: 130 SHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Lsi04G011080 vs. Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 9.8e-61
Identity = 108/132 (81.82%), Postives = 116/132 (87.88%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLF
Sbjct: 11  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 70

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           C KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQLKKEM +
Sbjct: 71  CDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMAA 130

Query: 128 SHNRKLAQPPEG 140
           SHNRKL QPPEG
Sbjct: 131 SHNRKLVQPPEG 142

[Close]

BLAST of Lsi04G011080 vs. Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.7e-60
Identity = 107/132 (81.06%), Postives = 114/132 (86.36%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLF
Sbjct: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           C KDYP+ PP VRF SR+NM CVN ETGVV+     +LA WQREYTMEDIL QLKKEM +
Sbjct: 72  CDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLKKEMST 131

Query: 128 SHNRKLAQPPEG 140
           SHNRKL QPPEG
Sbjct: 132 SHNRKLVQPPEG 143

[Close]

BLAST of Lsi04G011080 vs. Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43
Identity = 76/132 (57.58%), Postives = 101/132 (76.52%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           +PRNF LLEELE GEK  GDGT+SYG++ PDD+L+ SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           C KDYP+ PP VRF ++IN+ CVN + GVV+   LP+L+ W  +  +++IL++L++EM S
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 128 SHNRKLAQPPEG 140
           S N+KL QPPEG
Sbjct: 124 SSNKKLVQPPEG 135

[Close]

BLAST of Lsi04G011080 vs. TrEMBL
Match: A0A0A0KX17_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G627130 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.0e-76
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 1


Query: 1   MYICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGR 60
           M+ICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGR
Sbjct: 1   MHICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGR 60

Query: 61  IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQ 120
           IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKN+LPMLAKWQREYTMEDILTQ
Sbjct: 61  IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQ 120

Query: 121 LKKEMMSSHNRKLAQPPEG 140
           LKKEMMSSHNRKLAQPPEG
Sbjct: 121 LKKEMMSSHNRKLAQPPEG 139

[Close]

BLAST of Lsi04G011080 vs. TrEMBL
Match: A0A061E9M9_THECC (Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-75
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 127 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQLKLF 186

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPP+VRFQ+RINMTCVN ETGVVE +L PMLA WQREYTMEDILTQLKKEMMS
Sbjct: 187 CGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDILTQLKKEMMS 246

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
             NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 247 PQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]

BLAST of Lsi04G011080 vs. TrEMBL
Match: A0A151T3A5_CAJCA (Ubiquitin-conjugating enzyme E2 variant 1A (Fragment) OS=Cajanus cajan GN=KK1_016030 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-74
Identity = 133/153 (86.93%), Postives = 141/153 (92.16%), Query Frame = 1


Query: 5   LFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQL 64
           LFAVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPP TVHEGRIYQL
Sbjct: 2   LFAVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPGTVHEGRIYQL 61

Query: 65  KLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKE 124
           KLFCGKDYP+NPP+VRFQ+RINMTCVN ETGVVE  L PMLA WQRE TMEDIL QLKKE
Sbjct: 62  KLFCGKDYPENPPSVRFQTRINMTCVNQETGVVEPQLFPMLANWQRECTMEDILMQLKKE 121

Query: 125 MMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           MMS HNRKLAQPPEGNE+GR +QKGLVL+CCI+
Sbjct: 122 MMSPHNRKLAQPPEGNEDGRIDQKGLVLRCCIV 154

[Close]

BLAST of Lsi04G011080 vs. TrEMBL
Match: A0A067KPG6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.1e-74
Identity = 133/150 (88.67%), Postives = 138/150 (92.00%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIG GTVSYGMDD DD+ MQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGGGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPP+VRFQ+RINMTCVNPETGVVE +L PMLA WQRE TMEDILTQLKKEMMS
Sbjct: 70  CGKDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLANWQRECTMEDILTQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
             NRKL QPPEGNEE R +QKGLVLKCCIL
Sbjct: 130 PQNRKLVQPPEGNEEARMDQKGLVLKCCIL 159

[Close]

BLAST of Lsi04G011080 vs. TrEMBL
Match: A5B7Q8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 7.1e-74
Identity = 132/150 (88.00%), Postives = 139/150 (92.67%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CG+DYPDNPP V+FQ+RINMTCVN ETGVVE +L PMLA WQRE+TMEDILTQLKKEMMS
Sbjct: 70  CGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDILTQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
             NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 130 PQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159

[Close]

BLAST of Lsi04G011080 vs. TAIR10
Match: AT1G70660.1 (AT1G70660.1 MMS ZWEI homologue 2)

HSP 1 Score: 264.6 bits (675), Expect = 3.8e-71
Identity = 119/150 (79.33%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKEMMS
Sbjct: 70  CGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           S NRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 130 SQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Lsi04G011080 vs. TAIR10
Match: AT1G23260.1 (AT1G23260.1 MMS ZWEI homologue 1)

HSP 1 Score: 262.3 bits (669), Expect = 1.9e-70
Identity = 118/150 (78.67%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGK+YP++PP VRFQ+RINM CVNPETGVVE +L PML  W+REYTMEDIL +LKKEMM+
Sbjct: 70  CGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKKEMMT 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           SHNRKLAQPPEGNEE R + KG   KCC++
Sbjct: 130 SHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Lsi04G011080 vs. TAIR10
Match: AT2G36060.2 (AT2G36060.2 MMS ZWEI homologue 3)

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-60
Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN-TVHEGRIYQLKL 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N TVHEGRIYQLKL
Sbjct: 11  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQLKL 70

Query: 68  FCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMM 127
           FC KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQLKKEM 
Sbjct: 71  FCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEMA 130

Query: 128 SSHNRKLAQPPEG 140
           +SHNRKL QPPEG
Sbjct: 131 ASHNRKLVQPPEG 143

[Close]

BLAST of Lsi04G011080 vs. TAIR10
Match: AT3G52560.4 (AT3G52560.4 ubiquitin E2 variant 1D-4)

HSP 1 Score: 221.1 bits (562), Expect = 4.9e-58
Identity = 107/150 (71.33%), Postives = 114/150 (76.00%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN------------- 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N             
Sbjct: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPLLLLLVVTEI 71

Query: 68  -----TVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQ 127
                TVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETGVV+     +LA WQ
Sbjct: 72  NFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQ 131

Query: 128 REYTMEDILTQLKKEMMSSHNRKLAQPPEG 140
           REYTMEDIL QLKKEM +SHNRKL QPPEG
Sbjct: 132 REYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]

BLAST of Lsi04G011080 vs. TAIR10
Match: AT1G50490.1 (AT1G50490.1 ubiquitin-conjugating enzyme 20)

HSP 1 Score: 57.8 bits (138), Expect = 7.1e-09
Identity = 44/138 (31.88%), Postives = 61/138 (44.20%), Query Frame = 1


Query: 13  RLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDY 72
           RL  EL     G G G  ++    P++  +  W GTI G  +TV EG  Y+L L    DY
Sbjct: 39  RLQSELMGLMMGGGPGISAF----PEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDY 98

Query: 73  PDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLA-KWQREYTMEDILTQLKK-----EMM 132
           P  PP V+F++     C +P   V     L +L  KW   Y +  IL  ++       + 
Sbjct: 99  PFKPPKVKFET----CCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 158

Query: 133 SSHNRKLAQPPEGNEEGR 145
           S  N + AQ     EE R
Sbjct: 159 SPLNTQAAQLWSNQEEYR 168

[Close]

BLAST of Lsi04G011080 vs. NCBI nr
Match: gi|659129515|ref|XP_008464712.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 2.8e-84
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS
Sbjct: 70  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 130 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of Lsi04G011080 vs. NCBI nr
Match: gi|778706974|ref|XP_011655947.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus])

HSP 1 Score: 317.4 bits (812), Expect = 1.4e-83
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQLKLF 69

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKN+LPMLAKWQREYTMEDILTQLKKEMMS
Sbjct: 70  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKKEMMS 129

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
           SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 130 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of Lsi04G011080 vs. NCBI nr
Match: gi|700197179|gb|KGN52356.1| (hypothetical protein Csa_5G627130 [Cucumis sativus])

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-76
Identity = 136/139 (97.84%), Postives = 138/139 (99.28%), Query Frame = 1


Query: 1   MYICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGR 60
           M+ICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGR
Sbjct: 1   MHICLFAVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGR 60

Query: 61  IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQ 120
           IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKN+LPMLAKWQREYTMEDILTQ
Sbjct: 61  IYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQ 120

Query: 121 LKKEMMSSHNRKLAQPPEG 140
           LKKEMMSSHNRKLAQPPEG
Sbjct: 121 LKKEMMSSHNRKLAQPPEG 139

[Close]

BLAST of Lsi04G011080 vs. NCBI nr
Match: gi|1000952257|ref|XP_015578946.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 134/150 (89.33%), Postives = 141/150 (94.00%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPP+TVHEGRIYQLKLF
Sbjct: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPSTVHEGRIYQLKLF 71

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPP+VRFQ+RINMTCVNPETG VE +L PMLA WQREYTMEDILTQLKKEM+S
Sbjct: 72  CGKDYPDNPPSVRFQTRINMTCVNPETGAVEPSLFPMLANWQREYTMEDILTQLKKEMVS 131

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
             NRKLAQPPEGNEEGR +QKGLVLKCCIL
Sbjct: 132 PQNRKLAQPPEGNEEGRMDQKGLVLKCCIL 161

[Close]

BLAST of Lsi04G011080 vs. NCBI nr
Match: gi|590696752|ref|XP_007045250.1| (Mms zwei [Theobroma cacao])

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 1


Query: 8   VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLF 67
           VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHEGRIYQLKLF
Sbjct: 127 VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIYQLKLF 186

Query: 68  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLKKEMMS 127
           CGKDYPDNPP+VRFQ+RINMTCVN ETGVVE +L PMLA WQREYTMEDILTQLKKEMMS
Sbjct: 187 CGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDILTQLKKEMMS 246

Query: 128 SHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 158
             NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 247 PQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

The following BLAST results are available for this feature:

BLAST of Lsi04G011080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UEV1B_ARATH	6.8e-70	79.33	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1...	[more]
UEV1A_ARATH	3.4e-69	78.67	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1...	[more]
UEV1C_ARATH	9.8e-61	81.82	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1...	[more]
UEV1D_ARATH	3.7e-60	81.06	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1...	[more]
UBE2V_DICDI	1.4e-43	57.58	Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=...	[more]

BLAST of Lsi04G011080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX17_CUCSA	2.0e-76	97.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G627130 PE=4 SV=1	[more]
A0A061E9M9_THECC	1.3e-75	90.00	Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1	[more]
A0A151T3A5_CAJCA	1.1e-74	86.93	Ubiquitin-conjugating enzyme E2 variant 1A (Fragment) OS=Cajanus cajan GN=KK1_01...	[more]
A0A067KPG6_JATCU	4.1e-74	88.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1	[more]
A5B7Q8_VITVI	7.1e-74	88.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=...	[more]

BLAST of Lsi04G011080 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70660.1	3.8e-71	79.33	MMS ZWEI homologue 2	[more]
AT1G23260.1	1.9e-70	78.67	MMS ZWEI homologue 1	[more]
AT2G36060.2	1.4e-60	81.20	MMS ZWEI homologue 3	[more]
AT3G52560.4	4.9e-58	71.33	ubiquitin E2 variant 1D-4	[more]
AT1G50490.1	7.1e-09	31.88	ubiquitin-conjugating enzyme 20	[more]

BLAST of Lsi04G011080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129515\|ref\|XP_008464712.1\|	2.8e-84	100.00	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo]	[more]
gi\|778706974\|ref\|XP_011655947.1\|	1.4e-83	98.67	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus]	[more]
gi\|700197179\|gb\|KGN52356.1\|	2.9e-76	97.84	hypothetical protein Csa_5G627130 [Cucumis sativus]	[more]
gi\|1000952257\|ref\|XP_015578946.1\|	1.4e-75	89.33	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis]	[more]
gi\|590696752\|ref\|XP_007045250.1\|	1.8e-75	90.00	Mms zwei [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006301	postreplication repair
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0008150	biological_process
biological_process	GO:0009819	drought recovery
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G011080.1	Lsi04G011080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 40..131 score: 1.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 12..121 score: 17
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 8..140 score: 4.8
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 7..140 score: 1.32
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 8..146 score: 7.3
None	No IPR available	PANTHER	PTHR24067:SF117	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D	coord: 8..146 score: 7.3
None	No IPR available	SMART	SM00212	ubc_7	coord: 12..156 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G011080	Csa5G627130	Cucumber (Chinese Long) v2	culsiB364
Lsi04G011080	CSPI05G27920	Wild cucumber (PI 183967)	cpilsiB367
Lsi04G011080	Cucsa.029860	Cucumber (Gy14) v1	cgylsiB001
Lsi04G011080	CmaCh04G010200	Cucurbita maxima (Rimu)	cmalsiB679
Lsi04G011080	CmaCh04G000730	Cucurbita maxima (Rimu)	cmalsiB680
Lsi04G011080	CmoCh04G000690	Cucurbita moschata (Rifu)	cmolsiB673
Lsi04G011080	CmoCh04G010960	Cucurbita moschata (Rifu)	cmolsiB672
Lsi04G011080	Cla003400	Watermelon (97103) v1	lsiwmB309
Lsi04G011080	MELO3C026435	Melon (DHL92) v3.5.1	lsimeB286
Lsi04G011080	ClCG07G005750	Watermelon (Charleston Gray)	lsiwcgB296
Lsi04G011080	MELO3C026435.2	Melon (DHL92) v3.6.1	lsimedB301
Lsi04G011080	Cla97C07G133940	Watermelon (97103) v2	lsiwmbB297
Lsi04G011080	Bhi07G000331	Wax gourd	lsiwgoB389
Lsi04G011080	Cp4.1LG01g06070	Cucurbita pepo (Zucchini)	cpelsiB362
Lsi04G011080	Cp4.1LG01g07450	Cucurbita pepo (Zucchini)	cpelsiB361
Lsi04G011080	CsGy5G027310	Cucumber (Gy14) v2	cgyblsiB333
Lsi04G011080	Carg22017	Silver-seed gourd	carlsiB159
Lsi04G011080	Carg00130	Silver-seed gourd	carlsiB610
Lsi04G011080	CsaV3_5G037040	Cucumber (Chinese Long) v3	cuclsiB389

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G011080	Melon (DHL92) v3.5.1	lsimeB320
Lsi04G011080	Melon (DHL92) v3.6.1	lsimedB337