Carg00130 (gene) Silver-seed gourd

Overview
NameCarg00130
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin-conjugating enzyme E2
LocationCucurbita_argyrosperma_scaffold_001 : 664504 .. 668671 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGCTTGGGCTTAATATCACTACTCACCCGTTTCTCAAACCCAACTCTTTTACTTTCTCCATCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCGTTCATCTAGAAACTTTCTAAACCTCTCTCTCTCTCTCTCTCTCTCTCTGTTATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGGTGAGTTCTTCAAAACCCTAATTTTCTTCTCTCCTTTTCCTTTCCTTTCTGGGTTTTTATCTTTTGATTTCGATCTTCGTTTCTTTGATTACTGGATCGTTGTTGGGTTTATTGGGATTTTCGGGATTCTGTTTTTTCTAATTTGGAGTTTGGGTTTTGATGGAATTGTTGAATTGTTCATAGTTTAAGTGATGGGTTAAATCCCTTGGATTCAAATTCATGTTGTTCGTGTGTTTGATTAATAATCATGGAACTTCTTTGAACTATTTGATCAAGCTGTTTAAATTTATTGTTGTCGAAGTCGTGGTTGATCGAATTAGTTTTTATAATGACAGAGAATAGTGTAATTTGAAATTTGGTTCCGTGACTGATGAATGATCTTTTTCTTGTTTCTTACTCCTGGCTGACCTCTGCAAACTAGGACTTCAATATCATAACCTCTTCTGGCTATGACTTGATTACCCCTTGGATTGATTGGCTTACCTTTGAGAGGTTGTATGGAACTTAGTCCTTCTTGTCAATTCTATTTCCCTCTTCTTTTTGTGGTTTGTGCTACTTAGTCCTAAAGAACATGTATGCTTTGCTCTTGTCTATCCTGAGCCGCGAGTGAGGCTGGAGAGCAAAAAAGAACGAATGGATATGTGGGATTCCCGAGAAATTCTTCGATTTCTTCCGGAAGTCGATGGAGTCTGGCGAAGCCCTTTCCTTCCCTTTACTTTAGGGCTTGCTTGCCTTTACGTAAGGGAATAGTCCAACTTTCGACCCTATTTGGCTTTCAGTACTTTCTATTCTCGGTAACACCATTTATGTCCCTAAATCAATCTGATATTCTGTGAGTTGTCCGACCTGCCTCGATCCTGTTGGACCTTCAATCTCTCAACTGTTGGTTCAATTGGTTCAGTTTTCAACCAGTACTTGGAGTCACTCGGTTTCTCGTTCCTTATTTCCTTTCCAGTTTTTGTTTTTGGTTTCAGTTTGGTCAGAAAATCAATTTCAGTTGAAGTGTATGCTCTATTAGAAGTGCTTAGATCGATGAAAGATCAGGGATGTAATGAATCTTGACTATAAGAAATGATGAAACCAACTGAAGTGGTCTAGCCATTTAGCTGTGGTGAAGGATCGTATAAGATTTTATCGAAGGTGCTCGAAATCCCACTTTGGCCACCAAAGGATAGTTGGAAGACCTTAAAAGAGGTCATCTGCTTTCAAGGATGGATACCTAACATCTTTAGATGTCCAACATCTAATCAAGAATTTGGTCGTCCAACGATAACGGACTCTCCAAATATTTCCCTAATGGCTTAATATTGTCTACTTCAGGCATAAATCCTCGTGATTTTGTTTTGGAACTAACCAAAATCTCTCGTACTAACGGAGATAATTGTCCTTATTTATATATCATGGATCTCTCTTTTCCTTAACTAGTGTGAAACTTTGTTTGCACCTAACAATCCTCTCCTCTAACAAAGTACCACCTTGAGCCTCCCTTCATCTGTTCACCCCCGATTGCCTGTGAGAGTTTGCTCTTATCAAGCCCCAAAGCAAAGCCAAATTGAACACAACCATGGATACTCATTGTGGGATATACTTGGTGTCAACCACCATCGCGCCCTTAATCTCCTCCCCTCGAACAAAGATAGAGTCTACCTATTAGTCTACCCGACCTGATAGGACTACTCTCCATCCAAAGCCATTTGATTCGATAGAGCTCTTGCCACATCTCAAGCACTATTTGTCCAATCTAGGGACTCATCTCACAAGGCTCACTAATTTTGTTCGGAATTCGAGGATCTCACAAACACAACTAAGTTTTAAAACCATGGCTTTGATACCCTTGAGAAATGTAAGAATTCCTACCGTTTGCCTGTTTACTTAAAATTCCTTCAACATGCCTTCAAAACTCAGTAAAATAACCAACTATGACATGCCCAAGTAACAAAGAAGCCAGTAGCCAAGCATAGCCCTCCAGGACAGTCAATTTGCACCCTTGAGGTCTTGATTTGATTTAACTAGTATGTCCTTATTAGATCTCGGTTCTTAATTCTCTACAATGAAAAATGACACACCATATTTGAGTCATGTCTTGCCTTTATTTTTTCATATACCTTATTAAACGTGGTTGGTTCTATCAGTTTTATGATACAGTTGTATTTCTTGTGTGTATGTGCTTGTATAATCTATATGCTGTTCTCAAAAAACTTTTTATCCTGTCTCTCTCTACGGTCCACCTCGAATCGGATTCTGGGTGTTATCTGTCTTGAAACCCATAGACCCAGTTACTCGTGTTACAACTTTGAAGCACGATAGCTTTAGCTTGCTAATTATATCTCTTTGCTTGACCTATGCCGTCTGTTTGTTTGCAGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATGTGAGTTTCAACTTTTCTGCTTACAGGTTGGATCTTTTTCTTGTTTGCATGAATTTGAGGTGTTCTCTCAGAAAATGGATTATATTTACTCCTAAGTTGCATTTGCTATAAACATTTTGTCACGATTTTGAAAACGAGTAAGCAAAGAAGATGCCAAGATTTTGAAAACGAGTTGCATTCTCTCAGAAAATGCCAAGATTTTAATTATCCTCGCATCGGTTTGAGAGGGGAACGAAACATTCCTTATAAAAGTGTGGAAACCTCTCCATAGCCGACGCATTTTAGAATCGTGAGGCTGACAACGATACGTAATGGGCCAAAGTAGACAATATCTGCTAGGGGTAGGCTTGGGTTATTACACTCTCTTTCCCTCGCGTCTGTCTCTCTTGATACGTAGCATGACTGTTTCTGTTGTTTTTCCTTACTAATTTTATACGTTCTCAAATGCCTACAGTTCGCCCTTAGCTCGTCTCACTTAAAATTTGATGGTCTGATGTGTTGTTTTAGACTGTTCATGAAGGGCGAATCTACCAATTGAAACTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTACGAACCATTTCTTAAGCCATTTGTAACCATTTTATAACTGGAAATAATGTATGCTTGCTCAAATTACCAGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGTGCTTATATATCACCACTTAGATCATCTTTTCTTGCTTTTCTGCTAAAATGTTCTGCTGCTGTCATTTAAGAACCGTTTTACTATTTCGAAACACTACTTACCTTGTTCGTAGACAAAGCTAATTCGAAACAACGTTCTCAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCGGGTGAGAATTTGTTTCCCGAAAAAGTTTAGGGACTAAATTTGTGATAAGACCGAGCTATTACAATAATATCATAAGCTGAACTCGTGCAGATTTTGGGCGTACAGGGAGAATAAGATTGGTGAATGCTGAAGGCTTCTAAGATAGTTTAGCAATTTGAATTTGGCAAGCTCCCAATAAGGAGCTTAGTTTTCTGAAGTAAATGATGTGTGTTATGTAAGGATGAAGCTTTGAAGATGGATATTCTCAGTGTAAATGAATTCTTCTATATCATCAACGTTTAAGCTATAAATGTACTTAAAATATATGAGTTTGGTTATGGGTTTTTTACCAAATGAACAACAAACCATAAGTACGCATTGATATTGTTATATTAAAATTCGAAGCGTATGATATCCCATTTGCATATCGACACTCGAACCATATTGGTCAAGTCATTTCG

mRNA sequence

GCCGCTTGGGCTTAATATCACTACTCACCCGTTTCTCAAACCCAACTCTTTTACTTTCTCCATCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCGTTCATCTAGAAACTTTCTAAACCTCTCTCTCTCTCTCTCTCTCTCTCTGTTATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAACTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCGGGTGAGAATTTGTTTCCCGAAAAAGTTTAGGGACTAAATTTGTGATAAGACCGAGCTATTACAATAATATCATAAGCTGAACTCGTGCAGATTTTGGGCGTACAGGGAGAATAAGATTGGTGAATGCTGAAGGCTTCTAAGATAGTTTAGCAATTTGAATTTGGCAAGCTCCCAATAAGGAGCTTAGTTTTCTGAAGTAAATGATGTGTGTTATGTAAGGATGAAGCTTTGAAGATGGATATTCTCAGTGTAAATGAATTCTTCTATATCATCAACGTTTAAGCTATAAATGTACTTAAAATATATGAGTTTGGTTATGGGTTTTTTACCAAATGAACAACAAACCATAAGTACGCATTGATATTGTTATATTAAAATTCGAAGCGTATGATATCCCATTTGCATATCGACACTCGAACCATATTGGTCAAGTCATTTCG

Coding sequence (CDS)

ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAACTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA

Protein sequence

MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Homology
[Close]
BLAST of Carg00130 vs. NCBI nr
Match: XP_022942022.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_023516869.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 2.2e-88
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. NCBI nr
Match: XP_022990687.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima])

HSP 1 Score: 332.8 bits (852), Expect = 6.4e-88
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. NCBI nr
Match: XP_008464712.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_008464713.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 5.4e-87
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+NLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. NCBI nr
Match: XP_022157781.1 (ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 7.1e-87
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEM SSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMTSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. NCBI nr
Match: XP_011655947.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP_011655948.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP_011655949.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 2.7e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. TAIR10
Match: AT1G70660.1 (MMS ZWEI homologue 2)

HSP 1 Score: 274.6 bits (701), Expect = 3.8e-74
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Carg00130 vs. TAIR10
Match: AT1G23260.1 (MMS ZWEI homologue 1)

HSP 1 Score: 265.4 bits (677), Expect = 2.3e-71
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Carg00130 vs. TAIR10
Match: AT2G36060.2 (MMS ZWEI homologue 3)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-60
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 0 

Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN-TVHEGRI 64
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N TVHEGRI
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRI 65

Query: 65  YQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQL 124
           YQLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+     +LA WQR+YTMEDILTQL
Sbjct: 66  YQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQL 125

Query: 125 KKEMMSSQNRKLAQPPEG 142
           KKEM +S NRKL QPPEG
Sbjct: 126 KKEMAASHNRKLVQPPEG 143

[Close]
BLAST of Carg00130 vs. TAIR10
Match: AT3G52560.4 (ubiquitin E2 variant 1D-4)

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-59
Identity = 111/159 (69.81%), Postives = 120/159 (75.47%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN---- 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N    
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPL 62

Query: 61  --------------TVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERN 120
                         TVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+  
Sbjct: 63  LLLLVVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 122

Query: 121 LLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG 142
              +LA WQREYTMEDIL QLKKEM +S NRKL QPPEG
Sbjct: 123 KFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]
BLAST of Carg00130 vs. TAIR10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 43/138 (31.16%), Postives = 61/138 (44.20%), Query Frame = 0 

Query: 15  RLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDY 74
           RL  EL     G G G  ++    P++  +  W GTI G  +TV EG  Y+L L    DY
Sbjct: 39  RLQSELMGLMMGGGPGISAF----PEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDY 98

Query: 75  PDNPPAVRFQSRINMTCVNPETGMVERNLLPMLA-KWQREYTMEDILTQLKK-----EMM 134
           P  PP V+F++     C +P   +     L +L  KW   Y +  IL  ++       + 
Sbjct: 99  PFKPPKVKFET----CCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 158

Query: 135 SSQNRKLAQPPEGNEEGR 147
           S  N + AQ     EE R
Sbjct: 159 SPLNTQAAQLWSNQEEYR 168

[Close]
BLAST of Carg00130 vs. Swiss-Prot
Match: sp|Q9CAB6|UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.8e-73
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Carg00130 vs. Swiss-Prot
Match: sp|Q93YP0|UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.1e-70
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Carg00130 vs. Swiss-Prot
Match: sp|Q9SVD7|UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+     +LA WQREYTMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 TQLKKEMMSSQNRKLAQPPEG 142
            QLKKEM +S NRKL QPPEG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]
BLAST of Carg00130 vs. Swiss-Prot
Match: sp|Q9SJ44|UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.8e-61
Identity = 110/137 (80.29%), Postives = 119/137 (86.86%), Query Frame = 0 

Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIY
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 65

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
           QLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+     +LA WQR+YTMEDILTQLK
Sbjct: 66  QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 125

Query: 125 KEMMSSQNRKLAQPPEG 142
           KEM +S NRKL QPPEG
Sbjct: 126 KEMAASHNRKLVQPPEG 142

[Close]
BLAST of Carg00130 vs. Swiss-Prot
Match: sp|Q5F3Z3|UB2V2_CHICK (Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus OX=9031 GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.3e-43
Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY
Sbjct: 3   GSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIY 62

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
            LK+ CG  YP+ PP VRF ++INM  +N   GMV+   +P+LAKWQ  Y+++ +L +L+
Sbjct: 63  SLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQELR 122

Query: 125 KEMMSSQNRKLAQPPEG 142
           + MMS +N KL QPPEG
Sbjct: 123 RLMMSKENMKLPQPPEG 139

[Close]
BLAST of Carg00130 vs. TrEMBL
Match: tr|A0A1S3CM86|A0A1S3CM86_CUCME (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC103502532 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.6e-87
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+NLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. TrEMBL
Match: tr|A0A061E9M9|A0A061E9M9_THECC (Mms zwei OS=Theobroma cacao OX=3641 GN=TCM_011026 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.2e-80
Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 118 MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 177

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVN ETG+VE +L PMLA WQREYTMEDIL
Sbjct: 178 GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 237

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 238 TQLKKEMMSPQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]
BLAST of Carg00130 vs. TrEMBL
Match: tr|A0A2P4K007|A0A2P4K007_QUESU (Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51116 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP VRFQ+RINMTCVN ETG+VE +L PMLA WQRE+TMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPTVRFQTRINMTCVNQETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKL+QPPEGNEEGRT+QKGLVLKCCI+
Sbjct: 121 TQLKKEMMSPQNRKLSQPPEGNEEGRTDQKGLVLKCCIM 159

[Close]
BLAST of Carg00130 vs. TrEMBL
Match: tr|A0A2C9U7U3|A0A2C9U7U3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G083100 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.6e-79
Identity = 142/159 (89.31%), Postives = 150/159 (94.34%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP++RFQ+RINMTCVNPETG+VE +L PMLAKW+RE TMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPSIRFQTRINMTCVNPETGVVEPSLFPMLAKWRRECTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARMDQKGLVLKCCIL 159

[Close]
BLAST of Carg00130 vs. TrEMBL
Match: tr|A0A2P5AXC6|A0A2P5AXC6_9ROSA (Ubiquitin-fold modifier-conjugating enzyme OS=Trema orientalis OX=63057 GN=TorRG33x02_338670 PE=4 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 4.7e-79
Identity = 141/159 (88.68%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP VRFQ+RINMTCVN E+GMVE +L PMLA WQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPTVRFQTRINMTCVNQESGMVEPSLFPMLANWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKK+MMS QNRKLAQPPEGN+EGR +QKGLVLKCCI+
Sbjct: 121 AQLKKDMMSPQNRKLAQPPEGNDEGRMDQKGLVLKCCIV 159

The following BLAST results are available for this feature:
BLAST of Carg00130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942022.12.2e-88100.00ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_0235168... [more]
XP_022990687.16.4e-8899.37ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima][more]
XP_008464712.15.4e-8798.11PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_00... [more]
XP_022157781.17.1e-8798.11ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia][more]
XP_011655947.12.7e-8696.86PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP... [more]
BLAST of Carg00130 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70660.13.8e-7478.62MMS ZWEI homologue 2[more]
AT1G23260.12.3e-7176.10MMS ZWEI homologue 1[more]
AT2G36060.21.1e-6079.71MMS ZWEI homologue 3[more]
AT3G52560.42.0e-5969.81ubiquitin E2 variant 1D-4[more]
AT1G50490.13.6e-0831.16ubiquitin-conjugating enzyme 20[more]
BLAST of Carg00130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9CAB6|UEV1B_ARATH6.8e-7378.62Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
sp|Q93YP0|UEV1A_ARATH4.1e-7076.10Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
sp|Q9SVD7|UEV1D_ARATH1.6e-6178.72Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
sp|Q9SJ44|UEV1C_ARATH7.8e-6180.29Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
sp|Q5F3Z3|UB2V2_CHICK3.3e-4356.93Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus OX=9031 GN=UBE2V2 PE=... [more]
BLAST of Carg00130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CM86|A0A1S3CM86_CUCME3.6e-8798.11ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A061E9M9|A0A061E9M9_THECC4.2e-8090.57Mms zwei OS=Theobroma cacao OX=3641 GN=TCM_011026 PE=4 SV=1[more]
tr|A0A2P4K007|A0A2P4K007_QUESU2.1e-7989.31Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51... [more]
tr|A0A2C9U7U3|A0A2C9U7U3_MANES3.6e-7989.31Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G083100 PE=4 SV=... [more]
tr|A0A2P5AXC6|A0A2P5AXC6_9ROSA4.7e-7988.68Ubiquitin-fold modifier-conjugating enzyme OS=Trema orientalis OX=63057 GN=TorRG... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg00130-RACarg00130-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 14..158
e-value: 5.4E-22
score: 89.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
NoneNo IPR availablePANTHERPTHR43915FAMILY NOT NAMEDcoord: 3..141
NoneNo IPR availablePANTHERPTHR43915:SF4UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1Dcoord: 3..141
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 1..144
e-value: 4.8E-63
score: 213.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILYSSF54495UBC-likecoord: 9..142
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 42..133
e-value: 1.1E-15
score: 57.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 14..123
score: 17.707