CsaV3_5G037040 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G037040
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ubiquitin-conjugating enzyme E2
Location	chr5 : 29234333 .. 29249028 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAGTTGGGTTACAAACTAAATTCGGATCGATGTTCACATCGTTATTTGTTTAGAGTCCAGAAGTGCAGGTGTACGAAAACAACCATGGAGAGGTCCACGGAGGATAATACGTTGGGACTGCGTCTTTCTTCTGCCAGCGAAACTGGTGAAAGCAGCAGTCATTGTGTAGGTAGGACTAAGTCTTACGGCCGCTTGGGCTTCATATCTCACTCAACCATTTTGTCAACTTTTACTCTGCCTTTCATCCTTTTTTTTTTTCTCATTAGCTTCTTCCTTTCTCTGGAAACTTTCGCAATCTCTCTTTGTATTCTATGCTTCATGGGCTCCGAAGGATCCAGGGTGGTTGGTGAGTACTTCAAAACCCTAATTTTCTTCTATCCTTTCATTTCCTTTGTGGGTTTTTGTTTGATTTCTCAATCTTTGTTTATTTGTTCACTTGATCGGTGTTTCTGAAGTTGTTGGGTTAGTTGGGATTTTTCGAATTTTGGGTTTTGTTGGAATTGTTTGTTTGTTGATTGGTTATTGATGGGGCTGATTTCTTTGAATTCAAATTATTGTTGTTGTTGGTCACGTGTTTGATTAGATTATTTGATGGTCTTTTGATTGATTGATTGTTGTTATTAGAAAGGAACTTCTTTGAACTATTTGATCGAATTGGTTAAATTCATTGTTGTCAAAGTCGTGGATGATCGAATTAGTTTGTATAATGGCTGAGAACAATAAAATTCAAATTTGGAAATTTGGATTCGTGGGTGAAGAATTCTGAGAAAAATGTGATATTTCGATCTTACATGAAGACGAAACCTTCTTTGTTGTAGGAAAATTATAATATTAAAAGCTGTAATTGACTAATTATCTTTTTCCTGTTTCTCATACAGTATATATATTATGCTATTATATATACACATTGAAAAAGAAAAATAGGATTTAATGCAGATGGGTAAATCTTAGTCCGAAAGGAGACAAATTAAATAGGTCTTTAAAATCACAACCTTTTCAGGATATGATTTGATTAGACCTTGGACTGATTGGATCATCTGTGAGAGGATGAATGTCGTTCTATTTTTTAGAAGTAGGGTGAATGTACGTTCCTTATCTATCTCAATCTTTTTCTTTGCCCAACTATGAAGCCATCTTCTAGTTTGGTTGACTTGTTTGTAGAAAGCTTATCCAAGACTTTTCATCTTGTAAGTTTTAAGATTGGCCCTTTTGTAGTTTTTCATGTTTAGTGAACTTCTTACTTTGAGAATGATTTGTCTGATTTGTTTTACTTCATCGCGATATTGGTTTCAGTATGTAGTTCTCTTACAAGTTGATGTACCTTGTCATCTCAACTTGTTTAAAATCATGATTTCACAGCCGTTATGTTTCACTCGCATTCTGAATGCATGGAAACCTTATTTTCAATGTTGAAGTGGCCTTCCAATCAATATTGCTAAAGAATGATTTATAATTATCTGCAGTCTTTCCCACATAGTCCAGAAAATTAATTCAAGTTCCAAGTCAACCTAGTTAATTGGTAGTGGTAGGGTTGTTTTTTAATTAACGTAATCAATAGTCATGCAAGTTGATTGGATTTGAAAAGGAAAGCCTAATAAAGTTGGATTGAGTTGGTGTAAGTTTAACATAATACTCACGGAACATCTAGGTGATGGATTCGGCTAGAACTCACCCTTCTGGGTGTGAGAAATACATTGAGAGAGAAGGAGGTATGATGTGGGTTTTAGGAGGGCAAGCGAGAAAAAATAAGGTGTGATGTGTGTTGTGGGAGGGCAAGCGAGAAAGAAAAAGGTGAGGAGAAGGAAGAGAGAAGAAAAAAATTATTGTTTTATTTTTTATCTTTATATTTTAAAATTATATCATATTTTGCCACATCAACAACTTAAAAATATAAGATTAATATATTTAAGCCATTGTCTAGTCAGCCTTATATAACAGAAAATTAATAGGACCAAAAGTGTTAACGGTAGGGACCAAATGTTGCCAAATGCAATGCAGCCCAATTCAAAAGCAAACCTCATGGACCAAAAGCGTATTTCTCCTAAAATTAAAATGATATATTTTCCCCTCTTCCCATTGTCTATCCTCTCCTCCCTCTCTTTTTCTCCTTTGTTGCCATTCCCTCAACTCACATATTTTCGTTTTTTTTTCTAACGGAAAGTCCTCTCTCATGGGTAACCCATGGCTGGCAAGGTTGCTTTGGCGAATTTTTTTTTTTTTTTGATGAAAACAACTTTCACTGATTAAAGAAGAAATATTACAAGGGCTAACAAAACATCCTTTAAAGACCTCCCACTTAAGGAAGGAATTCCAACCAAGAGAGATGGTGAATAATTAGAGAAAAGCTTCGAAATAGAAGTCCAAAGAGAGACATGAAGTCTTATCAAAGACCAGACCTCCCAAGGGTCCTACTCCTTTTCTCTAAAAACTCTATCATTTCTCTCCCCCCAAATATCACACCCCGACAAGCTACATAAAACAACCTTTCTCTCTAAAAGGTGGATGGAAAAGAAACTCGTTGACCATGGCTCAGATATCTCTTTGACGAGTAATACTAATACCAAACTTTTGCAAGAAAGAACTCCACATCGTCCTCGTATACTGACAGTCCCAAAAAAGATGATACATGTCTTCTTCTGCCTTTCGATGCAAAATGCAACAAAAAGGACCCAGGTGTATCAAACACAAGTGTAGTTTTTCCCCGATTCAGCCTATCAAAAGTGTTCACATGACCGAGCAACATTTGCCAAATAAAGAACTTAACTTTCTTAGGTATTTTAATCCTCAAAATAATATCAAACATAGACGATCCAAAAGGGGAAAGATCTAATAACAGTTTGAAGAAGGATTTACAAGCAAACCCCTCCATAGGGTTTGGACTCCAAATTTGAACATCCTCTCTCTCCCCCCAAAAGGGTACCCCTCCAATAAAGAGAGCAAAGAGAAAACCTCCATCATTTCCCTATTGGACAAATTACGATAGAAGCCAAAGGAGAAAGAAATTGACTTCTTCGACCAAACCAAAAAATCAAAGGTTGGATAGTTTTAAGGAAGAAAGGTGATACAAATGAGGAAAAACGGTAGAAAGAGCTCCATCCCCCACCAGTTGATCCTCCCTAAAAGTGTGTACCCTACCGTTTCCCAGTACACTCCTCACAAAATGAGAAAAGGTAGGAAGCTCGAACAATATATCTTTTCGAGGATTTCGGCGTGCGCCTTTAACTCCTTTCTCCACCCAATCAAAAGGGTGGTTACCATGCTTACTCGCCACAATGTTGTGCCACCACGCTTTAGGCTCAAGGGTAAAGCGCCAAAGCCACTTAGCCAATAAAACTCTGCTCCAAGTCCTTAGATTGCCAATCTTGAGACCCCCATACTGACAGGTTTCCTCATTGCCCTTTTATCCACACCTTCTCAAAGAAAGTCCCTCGTGTATTTTTCTAAACATTTACAATCTGCATTGGGAGCTTAATAGAAAGAAAAATAATAGACGGGGATACCACTAAGAACTGATATGATCAAAGTTAACTTGCCTGCCCGCTTTGGAAAAGAAACTTTTCTTCCAATTATCAAGCCTCTTTAATCTTCTTGGATATGGGATCCCAAAACTACTTAGCTCTTGGGTTACCTCCCAAAGGAAGGAAGCCCAAGGTTGGTAGAAGGAAAAAATCCAACCTTACATCCAAATATCTCCGCCCATCTATCAATCTTCCTTTGATCACTATTTATCCCCGAAATTTAACACTTGATCCTATTAATTTTAAGACCAGACATGGCTTCCAAGGACTCCACCATATGATTAATGATCATAAAGGACTCCCCTTTACCTGAGCAAAACAAAATTTTGTCATCAGCAAACTGAAGGTGCAGTAAAGCCACTTCATTTGAACCAATCCTGAGAGGCTCAATGATATTTCCTTCCACACCCTTATTAGTTATTAATGAGCCTACCTAGAACGTCAACGAGTAAGAACAAGAAGGGGGATGGAGGATCTCCTTGCCTTAGACCTCTAGTTGCTAGGATAAAACTTCCATTGACCATGATACAATACTGAACATTCCTAACACAACCCCACATCCACATCCTCCATTGCCAGCCAAAGCCTTTCTTCATCATCACCTTATCCAAAAAATCCCTGTCAACGTGACCATATGCCTTTTCAGAATCAAGTTTGAGAATAACTCCTTCCTTATTCTTCAAACGGATGTCTTCAATTGCCTCATTGGCTATAAGAACCTGATCTAAGATATGCCTTCCTGCCAAAAAAGCTCCCTGAGCTTTAGAGATGGTAGAAGACATCACTTTCCTTAATTGATTAGCCAGGACTTTTGCCAAAATCTTATAAACACTATTGATGAGACTAATAGTCTAGACTTCTTTACTAAATTGGCATTTTCCTTCTTAGGTATTAGACACACTTAAGTCTCCCCCATGGACTGATTAAGAATACGTCTTTAAAAAAAACACTTTAGACCCCCCCTCCAAATCTCCCTTAACAATGTTCCAATTGTCCTTAAAGAAAGCCATAGTAAAACCATCCAAATCTGGGGATTTGTTCCCATCACTGCTAAACATGGGCTTTCTAATTTCCTCCAGTGTGAACGGAGCCACAAGCTCCTCGTCCTCCCTAAGAGCAATGGGGTTCCAATCAGTACCTTCAACGAAAGGTTTCTCTTGAGCTAGTGGACTATAAAGCTTTGAGAAAACTGTAAGCATTTCCTCCTCAATCTCTCGATCATTGCTGGTTCTCACCCTGCTCTCAAGTTACAGAGATCCAATATAATTCTTATTCCTTCTACAACTAGCCACTCTATGGAATAAACTAGTATTGCAGTCCCCTTCCTTGGCCCATTTAACTTTAGTCTTTTGGCTCCAATTGACAATTTTCTTTATGATCAACTCTTCAAAATCCCTTTTCAAGTCATCCCTCTCCATTCTTAGACTTTTGTCTTAAGGACCATCCAACTCGAGACTGTCAATTTCTTCAATTCTGTCTTAAATTGCCTTCTTTCTCATGCGAATATATCTAAAAGCTTCTCTATTCCAGACTTTAAGGTTACCTCAGCTTTCCCATTAGACAATAACCTTCCCATTTCCCTCGGACCATCATGCTCCACTAATTTGAAATATTAGCCTTAGAATTAGGATGGTCCAGCCACATATTTTCAAAATGAAAGGGGCGGGCCCCATCTAATTGGTCTTGAGTTCAGGATATTAGGCCAATGATCCGATATAATTCTAGGCCCTCTAGTTTGTCTGGGATAACGAAACCTTTCAATTCAAAACTTTGACAAAAGAAATCTATCAATCTCAGTAGCTCTTCTGCTATTTGTCTAGTTGAAATTACTCTCGACCAGAGGAGGATCAAATAACCCACTTTCTTCGATAAACTTGTTGAACCCCCTCATTAAGCTAGTTATCCTTCCCCAGACTTCTCCTTTGGAGATGGAACCACATTGAGATCTCCAGCCACACACCAATGTGAACTGCAATAAGCATAAAGGTCTCCCAACTCCTCCCAGAAAGCCTCCCTTCTCGAGGCTTCAGAGGACCATAAACCTCGTTAACCCAAAGTTCTTCACCTTCACTATCCAAAAAAGAGATAATGATAGAAAAATTCCCCCAAACCACTTCATTTGCCAAACATGTCCTAGTATTTGATAGAATAAGAATTCCACCTTGAGACCCAATCAATTCCAGGATCTCCCACTCCATCCTTCTATTCCTCCACATTTTTCCAATACTCCTACAGAAATATCTCCTTTTAGTTTCATAAGAATAACAGTATCCAGGTCCTCTTTTCTAAGGATCTCCTTAACAAGTTTCTTTTTAACTTGCCCAACCCAAGAGGCGAATTTTAATATTTAGATGTCAATAGCCCCTCCCCTTTTCAATCTTTCTTTCTTCTGTAACTTACATAGCGATCCAGTTTCTTTTACTCCCTTGCTAGTTTATCAGCCCCTCTTTTTCCTCTTCCTCTTTTCAACACCCTACTTTTGTAAGGTACCTAGCTCCCCTTTCCCATCTTTGGCTCTCTTGGCCTCCAATTTTTTAATTACCATCGAGGCTGAAGCTGCTCATCCTCGATTCTTTAAACCAATGTTTGATGGAGCCATGGAGGAGTTTGAAGACCTTTAGGATTGGACAACTAAAACCTTCACATTTTTTTGCTTACTTTTTTTTCAAAAAATATGATGACCTTCACGTTTTTTTTTTTGGCTATAATTACAAGATAGCTGTGTAATTTGTACACCTATCTCCCATTGAAAGAATTGTTTTTTCTCTTCTTCAATGATTCTAAAATCCCAAGAATGAAAGTGAAATTCTGAATATTGAGAGATAAACCCTGTCTTAACAAATTCTCTGGTTCCCCTTCTGATTTACATAAGCCCACTGCCATATTTGCACAAAATATTTAATGTCGCAACTTCAGTTTTCTTGAAAATCTCCTTCAGAGATTCCCAATTTGCATCCACATTTGCTTTCTTTATAATTACAGCCACTTCACATTCAAAAGCAAACTCACACAATTCTTCCTCTTTCTCCCATTGATCTTTATTTTGCAAAATCTTCTTTTCCGAGTCAGAGTCTACCTTCTTCATCTTCTCCTTTGTTTTAACTTCTTGGTTTAAGTCAACTTTTTTGAGTTTTGAAGAGGCTTAGCTACTTTTTGGACTGTGTTGCAACACACAGCTTCTTGGTGGAGTACGAATTACACCACTTTTGTAATTAGTAATTATAGCCTTTCTATGATTTTCAACAATTGGGAGGCCATCATTTTTTAGTTTCTTGTGGGGGAGGGCCTCTTATCCCTTGCCTATAGGTTGTTCTCTTTTGTTATATGAATATACATGTTTCTTATAAAAAAAAAAAAAAAAAAAAAACAAAGAGGCTTAGTTGCTTTTGGAAACCCAGTTGATTTGCCTGCTATCGACCGCCATCCCCTACCTTACGTCTTTGGGAATGAATATCCTCGTATGCCATCCCTTGAAGTACTCTAAGCAAAACTTCCTTTATTGTCTTCTAAAGTCTGGAAGAAGATAATTGCTGAACCTAATCTTCTTCTTTGCCCAAAACCCTTCGGATTAATGATCTTCTCAGCTGAGGCTAAGCAGTCTCTAACCCCACAATACCCCAATACAATTCCAGCTTGATAGATCTTTTTCCATACTTTTCATGGATGATTATTTTCCTTTTATTTGGAAAATCACTGATTACAAACAATTTTCTGTCTACTATAACCTCCCCCATTTTTAAATTTTCTCACATTTTGAGAGAAATTAGAGAGAGGTTTAAGTTTTAGTGCTCACTTCTTAGTTTGTTAGTTGTGATGCAACCTTCATCTCCAACAAGCAAGCTCGCTCCTGTTCAGTCTTATTATTATTCTCAATCTCTTAGCAACCTTAGCTGGAATGAGAGAGAAAGAGGGAGAGAATTAAGAGGAACTCTTGAAAGTATCCCCATTGTGGAAGGTAATCTAGACACTTCAAAAATGCAAGGATTCCTACCTTTAACGTTTAGCTTGTTTCTTTAAAATTCCTTGAAACTCAGTAAAAGAATCAATCTGTCCAACTGTCCCTAAGACGTACCCAAGTAATAGAGAAGCTAGTGGCCAAGCACAATCTAAGAAGCATGGATACAAATAACATAGATGTGGTCAGACTCATTTTCTTCAAGTCTTAACACATACACTTCCATTTATTTAAATATACATTTAAAAAATATTCATCATTCTATATGATATTGATATTCAAAGTTAACCTTTTTATAGTATGCTTAAAAATAGATTGCTGTATTTTCACTGAAAATTTAATAATTCTTGTCCTATATTATTATGTGTCTGTTTAGTATGCTTAACAAGTGTTCAATGTTTATCTAACAAATGATGAATTAATATTGACTTTGTATTACTAGTGTGTAACACAACTATTGTGTGTCTGACCTGTGTCTGACATGGACATGTTAGCCAAACTGAAGTCTTCCTACTTCTTAGCACAGCCCTCCATGACAGCCAACTTGCTTCTCTTGAGATCTTGATTAATTTAATTAACATGCCCTTATTATATCTTGGTTCTAATCTTTTAGAGAGGAATGAGACTATATTTATGTTGTGTTTTTTTAATAGACTTAAACGTGATTCCTTGACCAGTTTATGATACAGTTGTACTTTTTGTGTACATGTGCGTGTAAAATCTATCTACTGTTCTCTCAAATACTTTTTACTGCTTTTCAAAATATATATATATATTCTTTATCTCTCACTCCTAATCTGATTACGTGTGTTACATCTTGAAACCCATAGAGCCAGTTATGTTGCATCTTTGAAGCATGATAGTTTTAACTTGCTAATCATATCCCTTTGCTTGACCTATGCACATCTGCTTGTTTGCAGTTCCTCGGAATTTTAGATTATTGGAAGAGCTTGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGCATGGACGATCCAGATGATTTCTTAATGCAATCTTGGACTGGGACCATTATAGGTCCACCTAATGTGAGTTCCAAATTTTCAGCTTATGTGTTGGAACCTTTTTCTTATTTGAATGAGTTTGGGGGTATTCAGTTCAAGGTTGAAGTTGATGTCATTGAGTTCTCTGTGAAAGTGGATTTTATTTACCCCTAAATTGCATTTGTTATTTGTTATGAAGGTTGTCATATTTTTGAAAAAACATAAGCAAAAAAATGTGAAGGTTTTAGTTGTGCTACTGATTTGTTTAGAATGGTATTGATCTAATGAGCTTATCTGATGAGTATGAGTTATCAGAGTTTTTGAATCATCATAATTTGTAATTGATCTTGTTTGTGACACTTAATAACGATAAATGCCTTTGGATGTCGAACTTATCAATCACCCGTAAGTTACAAGGATTCTTTCTCTCTCGACTTCAACTTTCTTGTTGCAAAGCAACTGTTCTTGGCAATATAGCATGATTCTTTTTATTGTTTTTCATTCTAATTTTATACCTTTACTGCCTATCAGTTTTCTTCTAGCTAATTGTTTCTTAAGAAAGCTGATGGTTTGACTTTGTGTCTATTTAGACTGTTCATGAAGGGAGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTACCCGGATAATCCTCCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTATGAACTATTTCTCTAGGTATTTATAGTCATTTCGTAAATGGAAATAATGTGTGCTTGGTAATATTACCAGGTTGAAAAGAACATTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACAATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAATAGGAAGCTCGCTCAGCCTCCTGAAGGTGCTTATTTAGATCTCCAATCAAAATTGTTCATTGTTCTTAAGAGAAAAGTATCGGTAACAAGATTACAATGATGAATTTAGTCATTTTTTGAAAGGATATATCATCCATTCAAAACTGTTTGTTGCTTGAATTAGGACTTATTGGGACTATCTTTTCCGGTTAAATTTATGTGGTACTATATTTGCTAGCTGCTAAAATTTTCCTTCTGTTGTAAGTTTTTGGTTGGCTTTTTTATTATATATGCTCTGGTATATTCTTTCATTTCTCCTAATGAAAACGTGGTTTCTTAAAAAGAAAAAATTCTCAAAATCTAAAATTACATGTTAAGGACTGTTGTTACTATTTTAAAAAATGAAGCCAAATTTTGAAAGGTAGAAAAAAGTAATTTTCAAAAACTTGTTATTGTTTTTAGAAATTGACTAGGATTTCAAGTACTTCTCTAGAAAGGTGAAACCCACAATTGGAAAATTGGATACACTAAAAATGAAATGGTTACCTTAAAATGGGGCCTTAATCATCATTAGTGTTTGATTTGGAGTTTGAGATGACTGTGTAATATCATTTTCAGGAAATGAAGAGGGAAGGACGGAACAAAAGGGGCTAGTCTTGAAGTGTTGTATTCTTTGATTCAGGTAATTGCATGACATGATGAATTTTGAATAATTAAATAATTAAATAATTAAATATAAATATCAAAACAGCACTAGTAATTGTTAATACTCTTAATTAATTTTAAATATATTAAAAAATGTCCCTAGAAGATTCTTTAACTTTCAATTCATGTCCAAATAGGTTCCTAAAATTTCCAATTTTGTATCTAATAGGTCTTTGACCAAGTCGACATATTTTTGTAAAATTCATGTATCTATTGATTCTATAAAACATAAAATTCAATTTTATATCCCGTACATCAATTACCAATGAATCTTTGTTAAAAATTAAATGTGTTAGGGACCTATTAGATAAAATATGGATAGTTAAAGGATCTATCAGGCACAAAATTATAGTTTAGGGATTTGTTCGAAACAAAATTGAAAGTGTAAAGATTTATTACACACTTTTGGAAGTGCAAAGACCAAATAGATAGAAACCGAAAGTTCAAAGGAGTAAACTTGTAATTTAACCCATAGGAAACAAAAACCATCTTATTGATATGGTGAAATGTACCAAAGATCCTATAATGAATAATTTGAGGAATCTAGTCCAGTGTGTAATAACAGCAGATAAACTGCAATTGGAAAGAAGAGGCTGTAGCTTACTCCAAGATAAAGCTAAGAGAAAAATAGACTCCAAAGAAGGCTTGAATGAAATTCAGGCAGTTTTCTCATCCTTGAAAGGGAGATGATGTCACCAGGGCGAGTCAAATTCTACCCAAAAGTATTCAAGATATAATTGCTCTTAAAGTCATATCACATATGCAAAGGTACGACCACTGAAGATGTGGATTTCTGTTTCCATATTCTGTATGCATAGAGGACAGCAAGATGGAGAAATAGATAACAAAGGGAGATTTCTTCTATATAATGTCTTGTATTAAGCCCCCATGTGAAGAATTTAATCTTCTTTGGATGCATTCCTTTCCATATGTGTTTATAGAGCTATCAATGAGCACTGGTTACCACTGGTTTCTGGGGAGAGCAAAGTTATAGTAATAGCAAAGACAATGAGGTCCAAACCAGAAGCTCGTCTTTTTTAAGATGGTATCTGAAGAAGAGGTGCCTGGAATTCTCACTAGACTTCCAAAAGTCACCTATAGATGCCTCTTTTCTAGAGGGCATATAGGGGCGGCTAAGTTCCTTGAAGAGGATTCATACCACCTTCAAAATCAGATGAATGGGAATCTGAGGGCTTGGTGGTCTATTGTCAATCTTTTCTTACTCAGATCGGGCCTCTCCCTCAACGCCTGCAAAACTTCTCTTATTGGGATCAATATTAGTGATGATGTGGTTGTTTCTAGTGCTTTTTGTTGGGTTGCAAAGCTGATAAATTACCTTTCATCTATTTAGGTTTCCCCTTGGGTGGAAAGCTTGCGGCTAAGGAGGTGTGGACTGCTCTTGAGGAGAAATTTAAAACAAAAATTGACAAATGGTGAGGCTTGGTCTTTTCTAATGGGGATAGGCCTACTCTTGCTCGGTCGGTTCTTCAAAGCTTACCGTGCTACTTCTTCTCCTTATTGAAGGCTTCGAAGTGTTATATTTCTCACTTGGGGAAGCTTGTTCGTGATTTTGGACCAGAGGAATTGGTAATTCGGCTTACCCATCTTGTTTGACCTCTCTCTCTACATTTATGGAGGGTTGATAATTGGCTCCAATAGTCAGAAAAATAGTGCTCTCTTGATGAGGCGGCTTTGGAGGGTTTGCCACAACAAAAATGCCCTTTGGAGGAAGGCGAGTAGTGCTATTTATGGTTGTGGATGAGCATGGGTCTCCATTGAGCCAAGAGACAGAAGAAGCTTTAGATTGCATTGAGCCAAGAGACAGAAGAAGCTTTAGATTGCATTGAGCCAAGAGACAGAAGAAGCTTTAGATTGCATTGAGCCAAGAGACCGAAGAAGCTTTAGATTGCATTGAGCCAAGAGACAAGAAGCTTTAGATTATGGAATGGTATTTTAAAACAAAATATCAACGTTTTTCCTTTACCTACTTTGTGGTGGCTGATGGTGTGCTATAAGGATGTTTTGGTGGCGGATTGTTGGGTTAATTCAAGTCAAGCTTGGGATTTAGGGACGAGGAGAAGATTGTTTGATTGAGAAGGCAGCTATATTATTGCCCTTGCTCAATTGCTGATCAATTGGGTGGTGAATAGAACCAAGGATAGCTTACGATGTAGGTTGGAGGCTTTCTGGCAGTTTTCAACCAAGTGTTCCTTAAGTTGACTAGAGGGTCCCCAAAATTTAATCTCCCTATGTCCAATCTTATTTGCAAACCAAAAATTCCTAAAAACACGAAGTTTTTCCTTTGGTCCCTTCTGACCGAAGCCTGAACACTCATGACAGCCTCCAGATGAGGTTTCGTAATTGGTTTCTTTCCCTTTCCATGTTTCTTCTTTTGCCAGAAGGAGGTCGAGACCTTAGACCATTTATTCTTACACTGCGAGTTCACTTCAAAGGGTGAAGTAGGATTTTTTATACTTTAGGGTTGGATTGTTGGTCTCCCCATGAGGATTGATAATTGGATGATGGATGGCTTGGATGGTGGCAACTTTCGTGGGAAAGGAACAATCTTGTGGAGTTGTGCTACCTGTGCTCTTTTGTGGCATCTTTGGAATGAAAGGAATAGTAGGGGGTGTTTGAGGATAAGTTTAGTCCTTTCGATTCTTTTTAGGCTCTTGTGTCTTGGTGGTGTACAAATTACACAGTTATTTTGTAATTATAGCCTTTTCATGATTATTAACAATTGAAGGGGTCTTTTTGTTTAGTTTTTTTTCTTGTCCCTCAACCCAGCTTTCTTTTGTTCTTCATACATCTATCTATCTCCGTTTTATTAAAAAAAAATACCAATCCTCTTATCCTCTTTCTGGAATGATGTTTTATCTCCTTTCCCAACTTGATGAGTACAGTGTTTATGAAAGATGTCCTGTTTTGTTTGTCTGTAGATTTCCAAGGCCCTTTGGATGAGTGGAGGAGTACTCGGTCTCATACCATAACAGGTGGATGTGGGGTCCATTATTTAGTAACAATCAATTTCCTACATACGGATTTACCCTGTCATGCCCTAAGAAAACTAGGATAGTCAATGTTCGTCATGAAAATCCTTGGATAAACCCAGGAAACTAGCGCATATAATATTGTTTTCAAGAGAAACTTGACCTCGTTGTTGTTTACGTGTTGACTCATTAGAACTAATCTATTTTCAAATTTGAATTTTCATTGTACGTTGCATAGCATCATCATATATTCTACAAGGACAAGTTCTTGAATCTGAACACAAGGAACTAACCTCCTTTCTTCTTTACTTATGTATGCTTTGTTTATTAATTATTTCATCGAACAATAGGCATCATCTCTATGTCTATTTAGCCCTTGTACTTGTTCCTACGGATCTTTGTATTCTCTAGTCTGTTTCTGGTTAGATTTCAATTGGTGGTTGAATTTCCAATTGTGTATTTAATAAGTCCCTACCATTCATTTCTCTTTAAGTAGGCCCATGCGATCTTTGGTTTATGAGTTTGATATTTCAATCAGGCAGCAAGCCTCCATGTGAATAATTTTTTTTCTTGATCACCATATCTGCAGATTTTGGCAATGACTGAGGCATACACGGTGCTCGTCGGATTGCAGTATGCCAAAGCCTTGTACTCCGTTTATAGTTCTTAACATAGCAATTTGAATTTGGCAAGCTCTCAAAAGCGAGCTTGGTTGTCTAAAGTAAATGATGTGTCTTATGTATGGATAAATTCTGAAGTTGATGGATATTCTCAGTGTAAATGAAATTCTATATCAAAGTTTAAGGTGAAAAGGTATTAAATGATAATGTACTTAAGAATATACTTCGTGCTTTTTTTTCTCCGTATAGGACATCTTAAAAATAATTAGAGAAAGGGTGGCTTGGCCCAAGATTGTGATGAAAAGCTTGTTTCAGGGTTGGTGATTGGTTTGTTTCTTTGCTAGTTATCGTTATCATTGATTTGTTGGATTGAGGCTATTTAATAATTATGTACCATAGTTTAGGTTACTCAAAACTTGTTTTGTTTTTCTGCTGAAAAAAAGATAATGGAAAAGAAAAGAAACCCTCTCCTTTCTCATTTCACTCACATAACTTATCTCTTTTGCATGATCTTCCACAAGCAGCAGCAACAACAACAATGTTCTACCTACTCCCTGCTACCAAGTTCAGTATTTTTGTTAGCATTCCGCCGCCATCATAGTTTAACTTGGTCTTTGCATAGATGTGATTCCAACCAGCAAATATCTCAACCACTTGTGAACAAAGGTTGAGAGCCCTATGAAATCTTGAAAGCTGTATTTGATATGACAAAGGAAATTGTGTGGCTTAGAGAAGGGTCTTTATCGACATGATTTACACAAGACTCAACATTGGTCTTTTTCTTTTCGGAAGTGGTTCATCATTGAGATCTTTCCTACTTTTGTATATGTCCTTGTTATATCTTCTGTACATCTTTCTGTATTTTAGATTTCTATTCACAAATACCAATTAATTTATCTAATTTT

mRNA sequence

ATGGAGAGGTCCACGGAGGATAATACGTTGGGACTGCGTCTTTCTTCTGCCAGCGAAACTGGTGAAAGCAGCAGTCATTGTGTAGGATCCAGGGTGGTTGTTCCTCGGAATTTTAGATTATTGGAAGAGCTTGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGCATGGACGATCCAGATGATTTCTTAATGCAATCTTGGACTGGGACCATTATAGGTCCACCTAATACTGTTCATGAAGGGAGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTACCCGGATAATCCTCCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTTGAAAAGAACATTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACAATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAATAGGAAGCTCGCTCAGCCTCCTGAAGGAAATGAAGAGGGAAGGACGGAACAAAAGGGGCTAGTCTTGAAGTGTTGTATTCTTTGA

Coding sequence (CDS)

ATGGAGAGGTCCACGGAGGATAATACGTTGGGACTGCGTCTTTCTTCTGCCAGCGAAACTGGTGAAAGCAGCAGTCATTGTGTAGGATCCAGGGTGGTTGTTCCTCGGAATTTTAGATTATTGGAAGAGCTTGAGAGAGGTGAAAAAGGGATTGGGGATGGAACTGTCAGCTATGGCATGGACGATCCAGATGATTTCTTAATGCAATCTTGGACTGGGACCATTATAGGTCCACCTAATACTGTTCATGAAGGGAGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTACCCGGATAATCCTCCAGCTGTTAGATTCCAAAGTAGGATAAACATGACCTGTGTCAATCCTGAAACTGGAGTGGTTGAAAAGAACATTCTTCCCATGCTTGCCAAATGGCAAAGGGAATATACAATGGAGGACATATTGACACAACTGAAGAAAGAAATGATGTCATCACATAATAGGAAGCTCGCTCAGCCTCCTGAAGGAAATGAAGAGGGAAGGACGGAACAAAAGGGGCTAGTCTTGAAGTGTTGTATTCTTTGA

Protein sequence

MERSTEDNTLGLRLSSASETGESSSHCVGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL

Homology

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BLAST of CsaV3_5G037040 vs. NCBI nr
Match: XP_011655947.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP_011655948.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP_011655949.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 4.8e-87
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. NCBI nr
Match: XP_008464712.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_008464713.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo])

HSP 1 Score: 327.0 bits (837), Expect = 4.1e-86
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKN+LPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. NCBI nr
Match: XP_022942022.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_023516869.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 1.7e-84
Identity = 150/155 (96.77%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. NCBI nr
Match: XP_022990687.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima])

HSP 1 Score: 320.1 bits (819), Expect = 5.0e-84
Identity = 149/155 (96.13%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMSS NRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. NCBI nr
Match: XP_022157781.1 (ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia])

HSP 1 Score: 317.8 bits (813), Expect = 2.5e-83
Identity = 148/155 (95.48%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEM SS NRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMTSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. TAIR10
Match: AT1G70660.1 (MMS ZWEI homologue 2)

HSP 1 Score: 268.5 bits (685), Expect = 3.1e-72
Identity = 121/153 (79.08%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 31  RVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQL 90
           +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD LMQSWTGTI+GP NT +EG+I+QL
Sbjct: 7   KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQL 66

Query: 91  KLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKKE 150
           KLFCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKE
Sbjct: 67  KLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKE 126

Query: 151 MMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           MMSS NRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 127 MMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of CsaV3_5G037040 vs. TAIR10
Match: AT1G23260.1 (MMS ZWEI homologue 1)

HSP 1 Score: 265.4 bits (677), Expect = 2.6e-71
Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 30  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQ 89
           ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTI+GPPNT +EG+I+Q
Sbjct: 6   AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQ 65

Query: 90  LKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKK 149
           LKLFCGK+YP++PP VRFQ+RINM CVNPETGVVE ++ PML  W+REYTMEDIL +LKK
Sbjct: 66  LKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKK 125

Query: 150 EMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           EMM+SHNRKLAQPPEGNEE R + KG   KCC++
Sbjct: 126 EMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of CsaV3_5G037040 vs. TAIR10
Match: AT2G36060.2 (MMS ZWEI homologue 3)

HSP 1 Score: 234.6 bits (597), Expect = 5.0e-62
Identity = 112/138 (81.16%), Postives = 119/138 (86.23%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPN-TVHEGRI 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  M+SWTGTIIGP N TVHEGRI
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRI 65

Query: 89  YQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQL 148
           YQLKLFC KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQL
Sbjct: 66  YQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQL 125

Query: 149 KKEMMSSHNRKLAQPPEG 166
           KKEM +SHNRKL QPPEG
Sbjct: 126 KKEMAASHNRKLVQPPEG 143

[Close]

BLAST of CsaV3_5G037040 vs. TAIR10
Match: AT3G52560.4 (ubiquitin E2 variant 1D-4)

HSP 1 Score: 226.1 bits (575), Expect = 1.8e-59
Identity = 111/155 (71.61%), Postives = 117/155 (75.48%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPN-------- 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  M+SWTGTIIGP N        
Sbjct: 7   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPLLLLL 66

Query: 89  ----------TVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPM 148
                     TVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETGVV+     +
Sbjct: 67  VVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGL 126

Query: 149 LAKWQREYTMEDILTQLKKEMMSSHNRKLAQPPEG 166
           LA WQREYTMEDIL QLKKEM +SHNRKL QPPEG
Sbjct: 127 LANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]

BLAST of CsaV3_5G037040 vs. TAIR10
Match: AT1G50490.1 (ubiquitin-conjugating enzyme 20)

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-09
Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 0


Query: 15  SSASETGESSSHCVGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGT 74
           S+ S+   + +  V S+ V+    RL  EL     G G G  ++    P++  +  W GT
Sbjct: 18  SNGSKQPAAPTKTVDSQSVLK---RLQSELMGLMMGGGPGISAF----PEEDNIFCWKGT 77

Query: 75  IIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLA-K 134
           I G  +TV EG  Y+L L    DYP  PP V+F++     C +P   V     L +L  K
Sbjct: 78  ITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFET----CCFHPNVDVYGNICLDILQDK 137

Query: 135 WQREYTMEDILTQLKK-----EMMSSHNRKLAQPPEGNEEGR 171
           W   Y +  IL  ++       + S  N + AQ     EE R
Sbjct: 138 WSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYR 168

[Close]

BLAST of CsaV3_5G037040 vs. Swiss-Prot
Match: sp|Q9CAB6|UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.6e-71
Identity = 121/153 (79.08%), Postives = 138/153 (90.20%), Query Frame = 0


Query: 31  RVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQL 90
           +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD LMQSWTGTI+GP NT +EG+I+QL
Sbjct: 7   KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQL 66

Query: 91  KLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKKE 150
           KLFCGKDYP++PP VRFQSRINM CVNPE GVV+ +  PML+ W+RE+TMED+L QLKKE
Sbjct: 67  KLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKKE 126

Query: 151 MMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           MMSS NRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 127 MMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of CsaV3_5G037040 vs. Swiss-Prot
Match: sp|Q93YP0|UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.7e-70
Identity = 119/154 (77.27%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 30  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQ 89
           ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTI+GPPNT +EG+I+Q
Sbjct: 6   AKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQ 65

Query: 90  LKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKK 149
           LKLFCGK+YP++PP VRFQ+RINM CVNPETGVVE ++ PML  W+REYTMEDIL +LKK
Sbjct: 66  LKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDILVKLKK 125

Query: 150 EMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           EMM+SHNRKLAQPPEGNEE R + KG   KCC++
Sbjct: 126 EMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of CsaV3_5G037040 vs. Swiss-Prot
Match: sp|Q9SJ44|UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.6e-62
Identity = 112/137 (81.75%), Postives = 119/137 (86.86%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  M+SWTGTIIGP NTVHEGRIY
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 65

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFC KDYP+ PP VRF SRINMTCVN +TGVV+     +LA WQR+YTMEDILTQLK
Sbjct: 66  QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 125

Query: 149 KEMMSSHNRKLAQPPEG 166
           KEM +SHNRKL QPPEG
Sbjct: 126 KEMAASHNRKLVQPPEG 142

[Close]

BLAST of CsaV3_5G037040 vs. Swiss-Prot
Match: sp|Q9SVD7|UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-61
Identity = 111/137 (81.02%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  M+SWTGTIIGP NTVHEGRIY
Sbjct: 7   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 66

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFC KDYP+ PP VRF SR+NM CVN ETGVV+     +LA WQREYTMEDIL QLK
Sbjct: 67  QLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDILVQLK 126

Query: 149 KEMMSSHNRKLAQPPEG 166
           KEM +SHNRKL QPPEG
Sbjct: 127 KEMSTSHNRKLVQPPEG 143

[Close]

BLAST of CsaV3_5G037040 vs. Swiss-Prot
Match: sp|Q54D06|UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-43
Identity = 76/132 (57.58%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 34  VPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIYQLKLF 93
           +PRNF LLEELE GEK  GDGT+SYG++ PDD L+ SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 94  CGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLKKEMMS 153
           C KDYP+ PP VRF ++IN+ CVN + GVV+   LP+L+ W  +  +++IL++L++EM S
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 154 SHNRKLAQPPEG 166
           S N+KL QPPEG
Sbjct: 124 SSNKKLVQPPEG 135

[Close]

BLAST of CsaV3_5G037040 vs. TrEMBL
Match: tr|A0A1S3CM86|A0A1S3CM86_CUCME (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC103502532 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.7e-86
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKN+LPMLAKWQREYTMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 125 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. TrEMBL
Match: tr|A0A061E9M9|A0A061E9M9_THECC (Mms zwei OS=Theobroma cacao OX=3641 GN=TCM_011026 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.0e-77
Identity = 139/155 (89.68%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTIIGPPNTVHEGRIY
Sbjct: 122 GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIY 181

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPP+VRFQ+RINMTCVN ETGVVE ++ PMLA WQREYTMEDILTQLK
Sbjct: 182 QLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDILTQLK 241

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMS  NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 242 KEMMSPQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]

BLAST of CsaV3_5G037040 vs. TrEMBL
Match: tr|A0A2P4K007|A0A2P4K007_QUESU (Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51116 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 5.1e-77
Identity = 137/155 (88.39%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPP VRFQ+RINMTCVN ETGVVE ++ PMLA WQRE+TMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPTVRFQTRINMTCVNQETGVVEPSLFPMLANWQREHTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMS  NRKL+QPPEGNEEGRT+QKGLVLKCCI+
Sbjct: 125 KEMMSPQNRKLSQPPEGNEEGRTDQKGLVLKCCIM 159

[Close]

BLAST of CsaV3_5G037040 vs. TrEMBL
Match: tr|A0A2C9U7U3|A0A2C9U7U3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G083100 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 8.7e-77
Identity = 137/155 (88.39%), Postives = 144/155 (92.90%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGKDYPDNPP++RFQ+RINMTCVNPETGVVE ++ PMLAKW+RE TMEDILTQLK
Sbjct: 65  QLKLFCGKDYPDNPPSIRFQTRINMTCVNPETGVVEPSLFPMLAKWRRECTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMMS  NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 125 KEMMSPQNRKLAQPPEGNEEARMDQKGLVLKCCIL 159

[Close]

BLAST of CsaV3_5G037040 vs. TrEMBL
Match: tr|A0A2K1YS13|A0A2K1YS13_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G107700v3 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.1e-76
Identity = 136/155 (87.74%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 29  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHEGRIY 88
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD  MQSWTGTIIGPPNTVHEGRIY
Sbjct: 5   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHEGRIY 64

Query: 89  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDILTQLK 148
           QLKLFCGK+YPDNPP+VRFQ+RINMTCVNPE+GVVE ++ PMLA WQRE+TMEDILTQLK
Sbjct: 65  QLKLFCGKEYPDNPPSVRFQTRINMTCVNPESGVVEPSLFPMLANWQREHTMEDILTQLK 124

Query: 149 KEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 184
           KEMM+S NRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 125 KEMMTSQNRKLAQPPEGNEEARLDQKGLVLKCCIL 159

The following BLAST results are available for this feature:

BLAST of CsaV3_5G037040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655947.1	4.8e-87	100.00	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus] >XP...	[more]
XP_008464712.1	4.1e-86	98.71	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_00...	[more]
XP_022942022.1	1.7e-84	96.77	ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_0235168...	[more]
XP_022990687.1	5.0e-84	96.13	ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima]	[more]
XP_022157781.1	2.5e-83	95.48	ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia]	[more]

BLAST of CsaV3_5G037040 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70660.1	3.1e-72	79.08	MMS ZWEI homologue 2	[more]
AT1G23260.1	2.6e-71	77.27	MMS ZWEI homologue 1	[more]
AT2G36060.2	5.0e-62	81.16	MMS ZWEI homologue 3	[more]
AT3G52560.4	1.8e-59	71.61	ubiquitin E2 variant 1D-4	[more]
AT1G50490.1	8.3e-09	30.25	ubiquitin-conjugating enzyme 20	[more]

BLAST of CsaV3_5G037040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CAB6\|UEV1B_ARATH	5.6e-71	79.08	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q93YP0\|UEV1A_ARATH	4.7e-70	77.27	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q9SJ44\|UEV1C_ARATH	3.6e-62	81.75	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q9SVD7\|UEV1D_ARATH	1.4e-61	81.02	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q54D06\|UBE2V_DICDI	3.8e-43	57.58	Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=...	[more]

BLAST of CsaV3_5G037040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CM86\|A0A1S3CM86_CUCME	2.7e-86	98.71	ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A061E9M9\|A0A061E9M9_THECC	1.0e-77	89.68	Mms zwei OS=Theobroma cacao OX=3641 GN=TCM_011026 PE=4 SV=1	[more]
tr\|A0A2P4K007\|A0A2P4K007_QUESU	5.1e-77	88.39	Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51...	[more]
tr\|A0A2C9U7U3\|A0A2C9U7U3_MANES	8.7e-77	88.39	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G083100 PE=4 SV=...	[more]
tr\|A0A2K1YS13\|A0A2K1YS13_POPTR	1.1e-76	87.74	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G107700v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009819	drought recovery
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G037040.1	CsaV3_5G037040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 38..182 e-value: 1.2E-22 score: 91.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR43915:SF4	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D	coord: 25..165
None	No IPR available	PANTHER	PTHR43915	FAMILY NOT NAMED	coord: 25..165
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 19..168 e-value: 6.0E-63 score: 212.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	SSF54495	UBC-like	coord: 33..166
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 66..157 e-value: 7.5E-16 score: 57.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 38..147 score: 17.892

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G037040	CSPI05G27920	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G037040	Cucsa.029860	Cucumber (Gy14) v1	cgycucB005
CsaV3_5G037040	CmaCh04G000730	Cucurbita maxima (Rimu)	cmacucB0894
CsaV3_5G037040	CmaCh04G010200	Cucurbita maxima (Rimu)	cmacucB0896
CsaV3_5G037040	CmoCh04G000690	Cucurbita moschata (Rifu)	cmocucB0883
CsaV3_5G037040	CmoCh04G010960	Cucurbita moschata (Rifu)	cmocucB0891
CsaV3_5G037040	Cp4.1LG01g06070	Cucurbita pepo (Zucchini)	cpecucB0552
CsaV3_5G037040	Cp4.1LG01g07450	Cucurbita pepo (Zucchini)	cpecucB0558
CsaV3_5G037040	CsGy5G027300	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G037040	Carg22017	Silver-seed gourd	carcucB0206
CsaV3_5G037040	Carg00130	Silver-seed gourd	carcucB0710
CsaV3_5G037040	Cla003400	Watermelon (97103) v1	cucwmB417
CsaV3_5G037040	MELO3C026435	Melon (DHL92) v3.5.1	cucmeB386
CsaV3_5G037040	ClCG07G005750	Watermelon (Charleston Gray)	cucwcgB424
CsaV3_5G037040	Lsi04G011080	Bottle gourd (USVL1VR-Ls)	cuclsiB389
CsaV3_5G037040	MELO3C026435.2	Melon (DHL92) v3.6.1	cucmedB382
CsaV3_5G037040	Cla97C07G133940	Watermelon (97103) v2	cucwmbB409
CsaV3_5G037040	Bhi07G000331	Wax gourd	cucwgoB532

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None