Cp4.1LG01g07450 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g07450
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin-conjugating enzyme variant
Location	Cp4.1LG01 : 5515405 .. 5519927 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGAGAAGTCCACAGAGGGTTGCTACGGACTGCGTCCTTCTTCTGCCACTTAAACAGGGAGGAAACAGCGGTCATTCAGGGATGGCGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCTTTTTGATCCCAAAAGTATTATGGCCGCTTGGGCTTAATATCACTACTCACCCATTTCTCAAACCCAACTCTTTTACTTTCTCCGTCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCATTCATCTAGAAACTTTCTAAACCTCTCTCTCTCTCTCTGTTATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGGTGAGTTCTTCAAAACCCTAATTTTCTTCTCTCCTTTCCTTTCCTTTCTGGGTTTTTATCTTTTGATTTCAATCTTCGTTTCTTTGATTACTGGATCGTTGTTGGTTTATTGGGGTTTTCGGGATTCTGTTTTTTTCCAATTTGGAGTCTGGGTTTTGATGGAATTGTTGAATTGTTCATAGTTTAAGTGATGGGTTTACAAATTCATGTTGTTCGTGTGTTTGATTAATATTTATTTTGTATTCATAAGCATGGAACTTCTTTGAACTATTTGATCAAGCTGTTTAAATTTATTGTTCTCAGAGTCGTGGATGATCGAATTAGTTTTTATAATGACAGAGAATAGTGTAATTTGAAACTTGGATCCGTGACTGATGAATTTTGAGTTCTGATAGAGCAATGATCTTTTTCCTGTTTCTTACTCCTGGCTGACCTCTGCAAACTAGGACTTCAATATCATAACCTCTTCTGGCTATGACTTGATTAGCCCTTGGATTGATTGGCTTACCTTTGTGAGGTTGTATGGAACCTAGTCCTTCTTGTCAATTCCATTTCCCTCTTCTTTTTGTGGTTTGTGCTACTTAGTCCTAAAGAACATGTATGCTTTGCTCTTGCCTATCCTGGGCCGCGAGTGAGGCTGGAGAGCAAAAAACAACGAATGGATATTGTAGGATTCCCGAGAAATTCTTCGATTTTTTTCGGAAGTCGATAGAGTCAGACGAAGCCCTTTGCTTCCCTTTACTTTAGGGCTTGCTTGCCTTTATAAGTAAGGGAATAGTCCAACTTTCGACCCTATTTGGCATCTAGTACTTTCTATTCCCGGTAACACCATTTATGTCCCTAAATCAACCGTAAGTTGTCCGACCTGCCTCGATCCTGTTGGACCTTCAATCTCTCAACTGTTGGTTCAATTGGTTCAGTTTTCAACCAGTACTTGGAGTCACTCGGTTTCTCGTTCCTTATTTCCTTTCCAGTTTTTGTTTTTGGTTTCAGTTTGGTCAGAAAATCAATTTCAGTTGAAGTGTATGCACCATTAGAAGTGCTTAGATCGATGAAAGATCGGGGATGTAATGAATCTTGACCATAGGAGATGATGAAACTATCCGAAGTGGTCTATGCCATTTAGCTTGGTGAATGATCGTATAAGATTTTATCGAAGGTGCTCGAAATCCCACTTTGGCCACCAAGGGATAGTTGGAAGACCTTAAAAGAGGTCATCTGCTTTCAAGGAATTTGGATACCTAACATCTTTAGATGTCCAACATCGAATCAAGAATTTGGTCGTCCAACAATAACGGACTCTCCAAATATTTCCCCAATGGTTTAATATTGTCCACTTCAGGCATAAACTCTCGTGATTTTGTTTTTGGAACTAACCAAAAGCTCTCATACCAGTGAAGATAATTGTCCTTATTTATATACCATGGATCTCTCTTTTCCTTAACTAATGAGAAACTTTGTTTGCACCTAACAATCCTCTCCTCTAACAAAGTACCACCTTGAGCCTCCCTTCATTTGTTCACCCCCGATTGCCTGTGAGAGTTTGTTCTTATCAAGCCCCAAAGCAAAGCCAAATTGAACACAACCATGGATACTCATTGTGGGATATACTTGGTGTCAACCACCATCGCGCCTTAATCTCCTCCCCTCGAACAAAGATAGAGTCTACCTATTAGTCTACCCGACCTGATAGGACTACTCTCCATCCAAAGCCATTTGATTCGATAGAGCTCCTGCCACATCTCAAGCACTATTTGTCCAATCTAGGGACTCATCTCACAAGGCTCACTAATTTTGTTCGTAATTCGAGCATCTCACAAACACAACTAAGTTTTAAAACCATGGCTTTGATACCCTTGAGAAATGTAAGAATTCCTACCGTTAGCCTGTTTACTTAAAATTCCTTCAACATGCCTTCAAAACTCAGTAAAATAACCAACTATGACATGCCCAAGTAACAAAGAAGCCAGTAGCCAAGCATAGCCCTCCAGGACAGTCAATTTGCATCCTTGAGGTCTTGATTTGAGTTAACTAGTATGTCCTTATTAGATCTTGGTTCTAATTCTCTACCATGAAAAATGACACACCATATCTGAGTCATGTCTTGCTTTTTATTTTTTCATGGACCTTATTAAACGCGATTGGTTTTATCAGTTTTATGATACAGTTGTATTTCTTGTGTATGTGCTTGTATAATCTATATGCTGTTCTCAAAAACTTTTTATCCTGTCTCTCTCTACGGTCCACCTCGAATCGGATTCTGGGTGTTATCTGTCTTAAAACCCATAGAGTCAGTTACTTGTGTTACAACTTTGAAGCATGATAGCTTTAGCTTGCTAATTATATCTCTTTGCTTGACCTATGCCATCTGTTTGTTTTCAGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTAATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATGTGAGTTTCAACTTTTCTGCTTACAGGTTGGATCTTTTTCTTGTTTGCATGAATTTGAGGTATTCTCTCAGAAAATGGATTGTATTTACTCCTAAGTTGTTTGCTATGAAGATTTTGTCACGATTTTGAAAACGAGTAAGCAAAGAAGATGCCAAGATTTTAATTATACTGCTGCTTTGTCTGAAACGTTCTAGAATTTAACAAACTTGTGGGGATAGCTGAGAGTTTATGCATCATCATAAATGGTTTATCTTGCTTGTCACTTAATAAAGATAAGTGTCTTTGGTTGCCAAACTTGTTAATAACTCCTAACCTGCTAGGACCGAGGGTCTTTCTCACCTCGGTTTGAGAGGGGATGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGCCGACGCATTTTAGAATCGTGAGGCTGACAACAATACGTAATGGGCCAAAGTAGACAATATCTACTAGGGGTAGGCTTGGGTTATTACACTCTCTTTCCCTCGCGTCTGTCTCTCTCGATACGTAACATAACTCTTTCTGTTGTTTTTCCTTATTAATTTTATATGTTCTCCAATGCCTACAGTTCGCCCTTAGCTCGTCTCACTTAAAATTTTATGGTCTGATGTGTCGTTTTAGACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTATGAACCATTTCTTAAAGCCATTTGTAAACATTTTATAACTGGAAATAATGTATGCTTGCTAAAATTACCAGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGTGCTTATATATCACCATTTAGATCATATTTTCTTTCTTTACTGCTAAAATGTTCTGCTGCTGTCATTTAAGAACCGTTTTACTATTTCGAAACACTACTTCTTACCTTATTCGTAGACAAAGCTAATTTGAAACAACGTTTTCAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCGGGTGAGAATTTGTTTCCCGATAAAGTTTAGGGACTAAATTTGTGATAAGACCGAGCTATACAATAATATCATAAGCTGAACTCGTGCAGATTTTGGGCGTACAGGGAGAATCAGATTGGTGAATGCTGAAGGCTTCTAAGATAGCAGTTAACATAGCAATTTGAATTTGGCCAGCTCCCAAGAAGGAGCTTTGTTTTCTGAAGTAAATGATGTGTGTTATGTAAGGATGAAGCTTTGAAGATGGATCTTCTCAGTGTAAATGAATTCTTCTATATCATCAACGTTTAAGCTATAAATGTACTTAAAATATATGAGTTTGGTTATGGGTTTTTTACCAAATGAACAACAAAAAATAAGTATGCATTGATATTGTTATATTAAAATTCGAAGCGTATGATATCCCATTTACATATCGATACTCGAACCATCTTGGTCAAGTCATTTCGAGTACGAATATCGCATATCGAAAGTCTACCTCCCACATGTTTAGTTGAGTTGATCAA

mRNA sequence

CATGGAGAAGTCCACAGAGGGTTGCTACGGACTGCGTCCTTCTTCTGCCACTTAAACAGGGAGGAAACAGCGGTCATTCAGGGATGGCGNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGGCTTTTTGATCCCAAAAGTATTATGGCCGCTTGGGCTTAATATCACTACTCACCCATTTCTCAAACCCAACTCTTTTACTTTCTCCGTCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCATTCATCTAGAAACTTTCTAAACCTCTCTCTCTCTCTCTGTTATTCTATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTAATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGATTCGGATTTTGGGCGTACAGGGAGAATCAGATTGGTGAATGCTGAAGGCTTCTAAGATAGCAGTTAACATAGCAATTTGAATTTGGCCAGCTCCCAAGAAGGAGCTTTGTTTTCTGAAGTAAATGATGTGTGTTATGTAAGGATGAAGCTTTGAAGATGGATCTTCTCAGTGTAAATGAATTCTTCTATATCATCAACGTTTAAGCTATAAATGTACTTAAAATATATGAGTTTGGTTATGGGTTTTTTACCAAATGAACAACAAAAAATAAGTATGCATTGATATTGTTATATTAAAATTCGAAGCGTATGATATCCCATTTACATATCGATACTCGAACCATCTTGGTCAAGTCATTTCGAGTACGAATATCGCATATCGAAAGTCTACCTCCCACATGTTTAGTTGAGTTGATCAA

Coding sequence (CDS)

ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTAATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCTGTTAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA

Protein sequence

MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL

Homology

[Close]

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.7e-73
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.0e-70
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.5e-61
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+     +LA WQREYTMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 TQLKKEMMSSQNRKLAQPPEG 142
            QLKKEM +S NRKL QPPEG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.6e-61
Identity = 110/137 (80.29%), Postives = 119/137 (86.86%), Query Frame = 1


Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIY
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 65

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
           QLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+     +LA WQR+YTMEDILTQLK
Sbjct: 66  QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 125

Query: 125 KEMMSSQNRKLAQPPEG 142
           KEM +S NRKL QPPEG
Sbjct: 126 KEMAASHNRKLVQPPEG 142

[Close]

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot
Match: UB2V2_CHICK (Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-43
Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 1


Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY
Sbjct: 3   GSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIY 62

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
            LK+ CG  YP+ PP VRF ++INM  +N   GMV+   +P+LAKWQ  Y+++ +L +L+
Sbjct: 63  SLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQELR 122

Query: 125 KEMMSSQNRKLAQPPEG 142
           + MMS +N KL QPPEG
Sbjct: 123 RLMMSKENMKLPQPPEG 139

[Close]

BLAST of Cp4.1LG01g07450 vs. TrEMBL
Match: A0A061E9M9_THECC (Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 2.3e-80
Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 118 MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 177

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVN ETG+VE +L PMLA WQREYTMEDIL
Sbjct: 178 GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 237

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 238 TQLKKEMMSPQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]

BLAST of Cp4.1LG01g07450 vs. TrEMBL
Match: A0A067KPG6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 7.4e-79
Identity = 142/159 (89.31%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIG GTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGGGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVNPETG+VE +L PMLA WQRE TMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLANWQRECTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKL QPPEGNEE R +QKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLVQPPEGNEEARMDQKGLVLKCCIL 159

[Close]

BLAST of Cp4.1LG01g07450 vs. TrEMBL
Match: A0A0D2SHW4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G158400 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.7e-78
Identity = 139/159 (87.42%), Postives = 149/159 (93.71%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCG DYPDNPP+VRFQ+RINMTCVN ETG+VE +L PMLA WQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGLDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNR++AQPPEGNEE R +QKGLV+KCCI+
Sbjct: 121 TQLKKEMMSPQNRRMAQPPEGNEEARLDQKGLVVKCCIV 159

[Close]

BLAST of Cp4.1LG01g07450 vs. TrEMBL
Match: V4U648_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017021mg PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-78
Identity = 141/159 (88.68%), Postives = 147/159 (92.45%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCG DYPDNPP+VRFQ+RINMTCVN ETGMVE +L PMLA WQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QN KLAQPPEGNE+ R + KGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNWKLAQPPEGNEDARMDHKGLVLKCCIL 159

[Close]

BLAST of Cp4.1LG01g07450 vs. TrEMBL
Match: A5B7Q8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 8.2e-78
Identity = 140/159 (88.05%), Postives = 148/159 (93.08%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCG+DYPDNPP V+FQ+RINMTCVN ETG+VE +L PMLA WQRE+TMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159

[Close]

BLAST of Cp4.1LG01g07450 vs. TAIR10
Match: AT1G70660.1 (AT1G70660.1 MMS ZWEI homologue 2)

HSP 1 Score: 274.6 bits (701), Expect = 3.8e-74
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Cp4.1LG01g07450 vs. TAIR10
Match: AT1G23260.1 (AT1G23260.1 MMS ZWEI homologue 1)

HSP 1 Score: 265.4 bits (677), Expect = 2.3e-71
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Cp4.1LG01g07450 vs. TAIR10
Match: AT2G36060.2 (AT2G36060.2 MMS ZWEI homologue 3)

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-60
Identity = 110/138 (79.71%), Postives = 119/138 (86.23%), Query Frame = 1


Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN-TVHEGRI 64
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N TVHEGRI
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRI 65

Query: 65  YQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQL 124
           YQLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+     +LA WQR+YTMEDILTQL
Sbjct: 66  YQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQL 125

Query: 125 KKEMMSSQNRKLAQPPEG 142
           KKEM +S NRKL QPPEG
Sbjct: 126 KKEMAASHNRKLVQPPEG 143

[Close]

BLAST of Cp4.1LG01g07450 vs. TAIR10
Match: AT3G52560.4 (AT3G52560.4 ubiquitin E2 variant 1D-4)

HSP 1 Score: 225.7 bits (574), Expect = 2.0e-59
Identity = 111/159 (69.81%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPN---- 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP N    
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPL 62

Query: 61  --------------TVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERN 120
                         TVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+  
Sbjct: 63  LLLLVVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 122

Query: 121 LLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEG 142
              +LA WQREYTMEDIL QLKKEM +S NRKL QPPEG
Sbjct: 123 KFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]

BLAST of Cp4.1LG01g07450 vs. TAIR10
Match: AT1G50490.1 (AT1G50490.1 ubiquitin-conjugating enzyme 20)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 43/138 (31.16%), Postives = 61/138 (44.20%), Query Frame = 1


Query: 15  RLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDY 74
           RL  EL     G G G  ++    P++  +  W GTI G  +TV EG  Y+L L    DY
Sbjct: 39  RLQSELMGLMMGGGPGISAF----PEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDY 98

Query: 75  PDNPPAVRFQSRINMTCVNPETGMVERNLLPMLA-KWQREYTMEDILTQLKK-----EMM 134
           P  PP V+F++     C +P   +     L +L  KW   Y +  IL  ++       + 
Sbjct: 99  PFKPPKVKFET----CCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 158

Query: 135 SSQNRKLAQPPEGNEEGR 147
           S  N + AQ     EE R
Sbjct: 159 SPLNTQAAQLWSNQEEYR 168

[Close]

BLAST of Cp4.1LG01g07450 vs. NCBI nr
Match: gi|659129515|ref|XP_008464712.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 2.8e-87
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+NLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of Cp4.1LG01g07450 vs. NCBI nr
Match: gi|778706974|ref|XP_011655947.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 1.4e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]

BLAST of Cp4.1LG01g07450 vs. NCBI nr
Match: gi|1000952257|ref|XP_015578946.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis])

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 144/159 (90.57%), Postives = 151/159 (94.97%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPP+TVHE
Sbjct: 3   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPSTVHE 62

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVNPETG VE +L PMLA WQREYTMEDIL
Sbjct: 63  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPETGAVEPSLFPMLANWQREYTMEDIL 122

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEM+S QNRKLAQPPEGNEEGR +QKGLVLKCCIL
Sbjct: 123 TQLKKEMVSPQNRKLAQPPEGNEEGRMDQKGLVLKCCIL 161

[Close]

BLAST of Cp4.1LG01g07450 vs. NCBI nr
Match: gi|590696752|ref|XP_007045250.1| (Mms zwei [Theobroma cacao])

HSP 1 Score: 306.2 bits (783), Expect = 3.3e-80
Identity = 144/159 (90.57%), Postives = 150/159 (94.34%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 118 MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 177

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVN ETG+VE +L PMLA WQREYTMEDIL
Sbjct: 178 GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 237

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMMS QNRKLAQPPEGNEE R +QKGLVLKCCIL
Sbjct: 238 TQLKKEMMSPQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]

BLAST of Cp4.1LG01g07450 vs. NCBI nr
Match: gi|743822816|ref|XP_011021789.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Populus euphratica])

HSP 1 Score: 302.8 bits (774), Expect = 3.6e-79
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 1


Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPP+VRFQ+RINMTCVNPE+G+VE +L PMLA WQRE+TMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPESGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           TQLKKEMM+SQNRKLAQPPEGNEE R +QKGLV KCCIL
Sbjct: 121 TQLKKEMMASQNRKLAQPPEGNEEARLDQKGLVFKCCIL 159

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07450 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UEV1B_ARATH	6.7e-73	78.62	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1...	[more]
UEV1A_ARATH	4.0e-70	76.10	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1...	[more]
UEV1D_ARATH	1.5e-61	78.72	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1...	[more]
UEV1C_ARATH	7.6e-61	80.29	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1...	[more]
UB2V2_CHICK	3.2e-43	56.93	Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus GN=UBE2V2 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g07450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061E9M9_THECC	2.3e-80	90.57	Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1	[more]
A0A067KPG6_JATCU	7.4e-79	89.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1	[more]
A0A0D2SHW4_GOSRA	3.7e-78	87.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G158400 PE=4 SV=1	[more]
V4U648_9ROSI	4.8e-78	88.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017021mg PE=4 SV=1	[more]
A5B7Q8_VITVI	8.2e-78	88.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=...	[more]

BLAST of Cp4.1LG01g07450 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70660.1	3.8e-74	78.62	MMS ZWEI homologue 2	[more]
AT1G23260.1	2.3e-71	76.10	MMS ZWEI homologue 1	[more]
AT2G36060.2	1.1e-60	79.71	MMS ZWEI homologue 3	[more]
AT3G52560.4	2.0e-59	69.81	ubiquitin E2 variant 1D-4	[more]
AT1G50490.1	3.6e-08	31.16	ubiquitin-conjugating enzyme 20	[more]

BLAST of Cp4.1LG01g07450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659129515\|ref\|XP_008464712.1\|	2.8e-87	98.11	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo]	[more]
gi\|778706974\|ref\|XP_011655947.1\|	1.4e-86	96.86	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis sativus]	[more]
gi\|1000952257\|ref\|XP_015578946.1\|	1.5e-80	90.57	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis]	[more]
gi\|590696752\|ref\|XP_007045250.1\|	3.3e-80	90.57	Mms zwei [Theobroma cacao]	[more]
gi\|743822816\|ref\|XP_011021789.1\|	3.6e-79	88.68	PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009819	drought recovery
biological_process	GO:0009737	response to abscisic acid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g07450.1	Cp4.1LG01g07450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 42..133 score: 1.1
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 14..123 score: 17
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 8..142 score: 1.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 9..142 score: 9.77
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..148 score: 1.6
None	No IPR available	PANTHER	PTHR24067:SF147	SUBFAMILY NOT NAMED	coord: 1..148 score: 1.6
None	No IPR available	SMART	SM00212	ubc_7	coord: 14..158 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g07450	CmaCh04G010200	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g07450	CmaCh04G000730	Cucurbita maxima (Rimu)	cmacpeB722
Cp4.1LG01g07450	CmoCh04G010960	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g07450	CmoCh04G000690	Cucurbita moschata (Rifu)	cmocpeB674
Cp4.1LG01g07450	Cla003400	Watermelon (97103) v1	cpewmB416
Cp4.1LG01g07450	Csa5G627130	Cucumber (Chinese Long) v2	cpecuB450
Cp4.1LG01g07450	MELO3C026435	Melon (DHL92) v3.5.1	cpemeB368
Cp4.1LG01g07450	ClCG07G005750	Watermelon (Charleston Gray)	cpewcgB409
Cp4.1LG01g07450	CSPI05G27920	Wild cucumber (PI 183967)	cpecpiB451
Cp4.1LG01g07450	Lsi04G011080	Bottle gourd (USVL1VR-Ls)	cpelsiB361
Cp4.1LG01g07450	MELO3C026435.2	Melon (DHL92) v3.6.1	cpemedB428
Cp4.1LG01g07450	MELO3C005277.2	Melon (DHL92) v3.6.1	cpemedB422
Cp4.1LG01g07450	CsaV3_5G037040	Cucumber (Chinese Long) v3	cpecucB0558
Cp4.1LG01g07450	Bhi07G000331	Wax gourd	cpewgoB0553
Cp4.1LG01g07450	CsGy5G027310	Cucumber (Gy14) v2	cgybcpeB658
Cp4.1LG01g07450	Carg00130	Silver-seed gourd	carcpeB0938
Cp4.1LG01g07450	Carg22017	Silver-seed gourd	carcpeB0259

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g07450	Cp4.1LG01g06070	Cucurbita pepo (Zucchini)	cpecpeB374

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g07450	Melon (DHL92) v3.6.1	cpemedB502
Cp4.1LG01g07450	Melon (DHL92) v3.5.1	cpemeB431