Lsi04G007880 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G007880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRiboflavin biosynthesis protein ribF
Locationchr04 : 7401590 .. 7406553 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAAAGTCTGTGCCTCTCATTACTTCCCACTTGCCGCCCCCACTCGGTCCAAAGCGGCTGGCGATGTTGGCCGCCGGCGTTCGCGTTTCTCACCATCTACGGGAGTGCGACTCTCACTTTCCCTTCGGATTAACCTCCGGCCTTACCTCCTCCGCCGTCCTTCTCTTTCCTCCGATATGGCCTCGCAATCCCACTTCTAGTTTCCCTTCAATTTCTCACCGCTGCTCCCAACGACGTCGGGTTTCTTTCTTTTGCTCCATTGTCCCCTCCACCTCCTCCGGCGAAATCCCCGTTCTCTCCGATTGCTTTGGGTAACTTCCCATTCCATCTCCTTCGATTACTCATCGGCGTCCGTGTTGTTTTTTTTTTCTTATACTAATTACAATTTTGCCTGTTGTCCTTTTGTTTCTCAGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGTTTGTGTTCCTTCATTGTTTCTATCTTCTCCTGAAACTGCCGTCAATTTTATGGAAGAATGCTAATTCGTGTCTTCGTCTTAATTTTTCTGCGTCTTTCATGTGAGGGAAGTTTTTGGTCATTTTGGTTGGATTGGGAAGTTGAACGACTTTTTGACTGTATGATTGTTTGCTTATAATGCGGGTTCAAAATGGCTCCGATTTATATGCAATACCATGAGAATTGGCTTTTGTTAGAAATAGTGAAATACTGCTGGTATATCTGTGATCCAAGCATATAGCCTGCAGTTTTGACTATTTATTTAGTTTAGCAAGAAACAGACTTTTTGTTCAAGATACAAGCTCCCAAAAGGGGGTGAAAACTGAAAACATAGCAAAACTCCCAAATAAAGAACAAAGCTTCAAATGTTAGAAGAGGTTAAAAATACAATAAACGCCTAAGCTCTTGACAGAATTGATGATCCTAAGATTTAGGCTGTTGATGGGTCTTTTTTCTAGAGTATATAGTCAGTATTGTACAAAGGGAACTTCATGTCTATGGCATTTGTTCCACTTAGTGGTCAAACAGTTGATGGCTTCACATAGCACGTTGGGATGGAAATGGAATATAATACACTTATGAAGTCACCGACTTGAGAGCAAGTAGTGGAGACTTAAATATTGTTTATTTTGTTTCTAAAAACAATATTTTTAATAAAAAAAAACCAGCTTTCATTGGGGGGAAAATGAAAGAAAAAAAGAGAAAAAAAAAAAAAAATACAGAGAGTTACAAAATGGACAGCCCAACAAAAGGAGCCAAATCCAGCTAACCTAAGTTGGTCAGATGGGCATACTGTAGCTATGATCGATAGTTTTAGGAATGGAAGTCACAGTATTAGATGGATATTCTCCTGTCTTGTAGAGTTCTAGGCCCTCCAGTTTGGTAACTATGTGAGGAAGTTTTCTTTTCTTCTTTTGGATTAGCATGATATAAGAGAGTTGCAAACATAATTCTGTATTTCTCCTTTATAGTTTTGATAGTATGGGCCCGTTTTTTTAAAATCATATTTTGTCACTCAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTCCACGTTGGTCATCGAGAGCTTGCAATTCAAGCATCAACGGTTGGATCTCCATTTCTATTGTCATTTGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGTAAGCAAAATGCATTTTCTTTATGTAACTTATTATTTGTTTCATCATAAACGGTAGGAAAATTGCATCCGACAATTCCCTTACAAAATACAATTTTATGCAGTTTTGATTGTTTTCTAAGGTTCTGGCATATTCCACAACTTTATGCAACTACCCATATTTTCCTGTGGAAGGTTTGCCCATTCTAGTTGATTTTGGTACCTAGAAAATTTGTATGAACTTCTGATCCTCCATCGTTTTGCTTCAGTATAACACGAATGATTCACATTGAGTTTCCAATGGTAGTCTTGCAAGTTATAAAGGTGTAGTTATCATCATATAATGTTAAGTTGGTGGTTTGAGCGACGTGAAACTTATAGCATTTCTCCTAAAACGGATCCACTTAAGGGACATGAACAAGTAATCTCGATGGACTAGAGTTTAGTTGAGTTCTCTTCTGATAAGAATTTGGATGATTGATTCTCTACTGGAGTGAATCCATAACTCTTGTTCAGTCGTAGTTGGTGGACATGTGTAAGATATCCCTTAGCTCCTGATAATTTTCTATTCTAATATCTTGTGCCACCATCAGTTTTTCATTAAGGCTTGATGGCTGGCAACAATTGGGGAGCGCAGCCACCAAAAGAAAGAGAGTAAGGCACTCCAACATTATGGTTGGCTGTTAACAATCTGCAACGAAGAATGGAGGAAAGATTTGTGGTCACTGCTCAAGGTATTCAACATAGTTTAACAGCAATTGAGCGATTATTTGTTCGTGTTCAAGGATACAAGTTTGCAGGAGGGAACAAAAATAAAAAGAAATATTGAAAACAGGAGAATATAACGTGAACAGATTGCTAAAAACAAACAAGAATAAAATTTTCAAAATGACAAAACTAAATCCCTTTCAATTGGCAACCGTCTAGCTATCATCATGAGAGAATCAGGATGAGCTTTTGGAGACTTCTGCAGACTGCAATCATCTTACTTCTTGGTAACGTTTGCATAGGTTTCAACTAGCAATTGAGCAATTAGTTACTAACCCCATAGAGAAATCCTGCTCGGGAAGAGCAATGGATTCCAGTGAGGAATAATGGGAGGAGACACCAGATTAGAGTGAAAATGTACCTTTTGTGGAAAATTACTCTGCTAAAGCAGAGATTTCGGAGATCCTAAAAGCGGTGATGATCTGGAGGGAATTGTTATTCAGGGTATCAAAATTATAGATCCTTCTCTTTATCATTGTTGGAACATCCAAGTTTCTTTTGAAAGAAACAAAGCGTCACTGGACCTGGATTATTCTCGTCAACCTGTATTTGTGTCTGGTCTTTCTACCAATATAAACAAATTTCAGGAAATCGAATATCCAATTAATAGTGTGGTCTCCTGTATCCAGTGTTTCTTTATGTAATTGTTTGTAGAACAATGAAAATTTTGTGGAAGTGCCCTTGTCCCAAAAGGATCAAATTTCTACCATGGGAGATCACAAATTCTTGCCTCAATACCATGGATTGTTTACAGAATGCATGCTGTCCATGGATTCAACTATCTCCATCTTGGTGCTGTCTTTGCCAAAAAGCAGTGAATCAATTAATCACATTTTCTTCAAATGCCCCACCTCCTCGACCCTCGTACATTTGGTCGGAATTATTTACAGCCTTCAATTGGTCCACAGTTTCCCCTGATGACACACGGAATTGGCTTGGAATGTTGCTTATTGATCACCCTTTCACAGCCACCAAGAAGCATATATGGATTAACATTTCATCAGCTGTTTTGTGGAAGTTATGGAATTGGCCAAGGCCAAGACCGCAAATGGTATACTTGAATCAGCCATTTACAATGCTTTTTTTTTGGTGTAAAAACTTACAAGCTATTAAAAGTCATAGCTTTTTTCTTTTATTATAGCAAATTGGAAACATCTTTTGTATTTCCTTTGAATAGAACGACCTTTTTTATATCCTTGGATATTCATTCAATCAATGAAATTGTTTCTTATAAAAAAAAATCATCTAAGAAACATCAGATAATTTGATAATGTTTTATGCTGTTTCTCTGTCTCTTTTAAACTCTGTTTCTCTCCCTGTTTTAGATAGGCAAATGATGGGAAAACAAATACCATCTGTTATTTTCTCTGAGGATTTGTAATGAAGATGTTGAGTTTATTCAGTTGCAGATCTCTAACCCTCCCTTTGTTCTCAACAAATACTAAGAATTATATTCTTGGAGTTAATTATTTATCTGTTAGTTAAATTGAACAGGGCTCCCATAGTTGCTCAATGTGATAGGAAGCGAGTTCTTTCCTCATGGGCACCATACTGCCGGAACTCAGCTCCATCAGAATATCAGATTCAATTTTCAAGCGTCCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAACTTGGTGTTTGTGGAGTAGTGGCAGGTAAATTGAATTAAAACGTGTAGTACACATCTTTTATTGGTAAAATACTCTCTTGGACTTTGTTAAAATGTAATCGTTTTGAGGTTTTGATTGACGATGGTGGCAGGGGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTGGTGAAACTGTGTGGGGAATATGGGATAGGTGCTTATATTATAAAATCTGTGATGGATAGAAGTCAAAAAGTTGTTAATTCTGCCAATTCAAAGGAGAGAGGACAAGTGTCTTCTACTCGGGTTCGCTATGCACTCTCCATAGGAGATATGAAATATGTCTCTGAGCTTTTAGGCCGCAGACATCGTCTTATTTTGATGACGAAAGGCCTAGAGGGATTTAGCAATAGCAATAGCAGAGTGTCAGCCCCAAGATCATGTTTGTTAAATTTAGCCCCAAAAGAAGGTCTCTATAGTAAGTGTTTTGTCTGCACAACTGATGAGAACCTAATTCCATGTCGGGTAGTTATTGACTCGACTCATGTTCACATAGAAATGGATGATATAGGTACAAGCCATCTTGTAGGAACGCAAGACTACATAAATGTTGAATTTGGCGATGAAGGAGTATGATTGTGTTCGATTCACCTCCTTTTATTTTCTAGAGACAAAGGAATTCCTTGATGACATATCTTATTCACATACTAAAATGTCCAGATCCCTTGGATTCTGGATTATCTATATCCATCAGTGAGATCCATAATTTTTCTTGCAAAGAGGTATGGAGCTTATTTTGTGATTCACTTTGAGGGTGTTTCAGCAATAATGTTCTAAACGTATGCAGACACGAGCACGGGGTTCACGAGCTGATGTGGAGAATGCTTCATCATTTACAGCTGGTTCTGTGAAGTTGCACTACTTATTTTGGTAG

mRNA sequence

GAGAAAGTCTGTGCCTCTCATTACTTCCCACTTGCCGCCCCCACTCGGTCCAAAGCGGCTGGCGATGTTGGCCGCCGGCGTTCGCGTTTCTCACCATCTACGGGAGTGCGACTCTCACTTTCCCTTCGGATTAACCTCCGGCCTTACCTCCTCCGCCGTCCTTCTCTTTCCTCCGATATGGCCTCGCAATCCCACTTCTAGTTTCCCTTCAATTTCTCACCGCTGCTCCCAACGACGTCGGGTTTCTTTCTTTTGCTCCATTGTCCCCTCCACCTCCTCCGGCGAAATCCCCGTTCTCTCCGATTGCTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTCCACGTTGGTCATCGAGAGCTTGCAATTCAAGCATCAACGGTTGGATCTCCATTTCTATTGTCATTTGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGGCTCCCATAGTTGCTCAATGTGATAGGAAGCGAGTTCTTTCCTCATGGGCACCATACTGCCGGAACTCAGCTCCATCAGAATATCAGATTCAATTTTCAAGCGTCCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAACTTGGTGTTTGTGGAGTAGTGGCAGGGGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTGGTGAAACTGTGTGGGGAATATGGGATAGGTGCTTATATTATAAAATCTGTGATGGATAGAAGTCAAAAAGTTGTTAATTCTGCCAATTCAAAGGAGAGAGGACAAGTGTCTTCTACTCGGGTTCGCTATGCACTCTCCATAGGAGATATGAAATATGTCTCTGAGCTTTTAGGCCGCAGACATCGTCTTATTTTGATGACGAAAGGCCTAGAGGGATTTAGCAATAGCAATAGCAGAGTGTCAGCCCCAAGATCATGTTTGTTAAATTTAGCCCCAAAAGAAGGTCTCTATAGTAAGTGTTTTGTCTGCACAACTGATGAGAACCTAATTCCATGTCGGGTAGTTATTGACTCGACTCATGTTCACATAGAAATGGATGATATAGATCCCTTGGATTCTGGATTATCTATATCCATCAGTGAGATCCATAATTTTTCTTGCAAAGAGACACGAGCACGGGGTTCACGAGCTGATGTGGAGAATGCTTCATCATTTACAGCTGGTTCTGTGAAGTTGCACTACTTATTTTGGTAG

Coding sequence (CDS)

ATGTTGGCCGCCGGCGTTCGCGTTTCTCACCATCTACGGGAGTGCGACTCTCACTTTCCCTTCGGATTAACCTCCGGCCTTACCTCCTCCGCCGTCCTTCTCTTTCCTCCGATATGGCCTCGCAATCCCACTTCTAGTTTCCCTTCAATTTCTCACCGCTGCTCCCAACGACGTCGGGTTTCTTTCTTTTGCTCCATTGTCCCCTCCACCTCCTCCGGCGAAATCCCCGTTCTCTCCGATTGCTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTCCACGTTGGTCATCGAGAGCTTGCAATTCAAGCATCAACGGTTGGATCTCCATTTCTATTGTCATTTGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGGCTCCCATAGTTGCTCAATGTGATAGGAAGCGAGTTCTTTCCTCATGGGCACCATACTGCCGGAACTCAGCTCCATCAGAATATCAGATTCAATTTTCAAGCGTCCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAACTTGGTGTTTGTGGAGTAGTGGCAGGGGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTGGTGAAACTGTGTGGGGAATATGGGATAGGTGCTTATATTATAAAATCTGTGATGGATAGAAGTCAAAAAGTTGTTAATTCTGCCAATTCAAAGGAGAGAGGACAAGTGTCTTCTACTCGGGTTCGCTATGCACTCTCCATAGGAGATATGAAATATGTCTCTGAGCTTTTAGGCCGCAGACATCGTCTTATTTTGATGACGAAAGGCCTAGAGGGATTTAGCAATAGCAATAGCAGAGTGTCAGCCCCAAGATCATGTTTGTTAAATTTAGCCCCAAAAGAAGGTCTCTATAGTAAGTGTTTTGTCTGCACAACTGATGAGAACCTAATTCCATGTCGGGTAGTTATTGACTCGACTCATGTTCACATAGAAATGGATGATATAGATCCCTTGGATTCTGGATTATCTATATCCATCAGTGAGATCCATAATTTTTCTTGCAAAGAGACACGAGCACGGGGTTCACGAGCTGATGTGGAGAATGCTTCATCATTTACAGCTGGTTCTGTGAAGTTGCACTACTTATTTTGGTAG

Protein sequence

MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRRVSFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQKVVNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDIDPLDSGLSISISEIHNFSCKETRARGSRADVENASSFTAGSVKLHYLFW
Homology
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BLAST of Lsi04G007880 vs. Swiss-Prot
Match: RIBF2_ARATH (FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.7e-101
Identity = 195/353 (55.24%), Postives = 252/353 (71.39%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISH--RCSQRR 60
           ML  G RV  HL + + H   GL  G   + ++     + R P+ +     H  R  ++R
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLR-PSQAMAKSHHFSRKLRQR 60

Query: 61  RVSFFCSIVPSTSSGEIPVLSDCFGSREDDREVSV------AGGIVALGKFDALHVGHRE 120
            +S F S     +SGE+P+L +CF  REDD E+ V      +GGIVALGKFDALH+GHRE
Sbjct: 61  MISSFGS--HCRTSGEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRE 120

Query: 121 LAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQF 180
           L IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F
Sbjct: 121 LTIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEF 180

Query: 181 SSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSV 240
           +SVR+LTPR+FVEKLSKEL VCGVVAGE+YRFGYKA+GDA+ELV+LC E GI A II SV
Sbjct: 181 ASVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSV 240

Query: 241 MDRSQKVV--NSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSN 300
           MD  Q     +S +SK+RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +  +    
Sbjct: 241 MDMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQD--MP 300

Query: 301 SNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDI 344
           S   +S PRS +LNL P  G+Y  C +   DE+ +PC VV+D++++H+E +++
Sbjct: 301 SERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEV 348

[Close]
BLAST of Lsi04G007880 vs. Swiss-Prot
Match: RIBF1_ARATH (FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 9.3e-92
Identity = 186/354 (52.54%), Postives = 245/354 (69.21%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFP--PIWPRNPTSSFPSISHRCSQRR 60
           ML  G R S HL +   H P      L  S+ +L P   I  +   SSF S    C   R
Sbjct: 1   MLCGGSRASVHLWD-HRHPPRLGAKVLRKSSFMLRPCSAISQQRIKSSFRS---HCKTPR 60

Query: 61  RVSFFCSIVPSTSSGEIPVLSDCFGSREDDREVS------VAGGIVALGKFDALHVGHRE 120
           +               IP   DCF   +D  E+S      VAGGIVALGKFDALH+GHRE
Sbjct: 61  K---------------IPAPLDCFSQGDDHPELSAEGLSPVAGGIVALGKFDALHIGHRE 120

Query: 121 LAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQF 180
           LAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSSWA YC N AP E++I+F
Sbjct: 121 LAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSSWASYCGNIAPVEFEIEF 180

Query: 181 SSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSV 240
           +SVR+L P++FVEKLS+EL VCGVVAGE+YRFGY+A+GDA+ELV+LC ++GI AYII SV
Sbjct: 181 ASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASELVRLCKDFGISAYIINSV 240

Query: 241 MDRSQKVVNS----ANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGF 300
           MD++Q  VN+    + SKERGQVSSTRVR+AL+ GD++YV+ELLGR HR+I  T+  +  
Sbjct: 241 MDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTELLGRPHRVISRTR-TQDL 300

Query: 301 SNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDD 343
           ++   R+S   S LLNL P  G+Y  C +   D++ I C+V++D+++++IE ++
Sbjct: 301 TSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKVIVDTSNLYIETEE 334

[Close]
BLAST of Lsi04G007880 vs. Swiss-Prot
Match: RIBF_ORYSJ (FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.9e-87
Identity = 165/273 (60.44%), Postives = 209/273 (76.56%), Query Frame = 1 

Query: 77  VLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLG 136
           +L DC G  +D     V  GIVALGKFDALH+GHRELA+ AS  G+PFLLSFVGIAEVLG
Sbjct: 111 LLIDC-GEDQD----CVIDGIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLG 170

Query: 137 WEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVCGV 196
           WE R PIVAQCDRKRVL+SWAPYC+N  P EYQ++FS VRYLTPR+FVE+LS++L + GV
Sbjct: 171 WEYRPPIVAQCDRKRVLTSWAPYCKNVVPIEYQVEFSKVRYLTPRQFVERLSRDLKIQGV 230

Query: 197 VAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQK---VVNSANSKERGQVSS 256
           VAGE+YRFGY+A+GDAAELVKLC E+G+ A+I++SVMD ++    V  S NS ++GQVSS
Sbjct: 231 VAGENYRFGYRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSS 290

Query: 257 TRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSNSNSRVSAPRSCLLNLAPKEGLYS 316
           +RVR+AL++GDM+YVSELLGR+HRL+L  K  E       R+  P+SC+LN+ P +GLY 
Sbjct: 291 SRVRHALAMGDMEYVSELLGRKHRLVLTVK--ENHLQERKRIMLPKSCMLNMPPADGLYE 350

Query: 317 KCFVCTTDENLIPCRVVIDSTHVHIEMDDIDPL 347
            C +     +L  CRV+I+S  + IEM D + L
Sbjct: 351 NCDL-LNGGHLGLCRVIINSETIVIEMKDENSL 375

[Close]
BLAST of Lsi04G007880 vs. Swiss-Prot
Match: RIBF_BUCAI (Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=ribF PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.6e-06
Identity = 51/194 (26.29%), Postives = 94/194 (48.45%), Query Frame = 1 

Query: 94  AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPR---------APIV 153
           +  +V +G FD +H+GH++L      +G  + LS +    V+ +EP+         AP+ 
Sbjct: 15  SNSVVTIGNFDGIHLGHQKLFSHIYQIGQKYKLSTI----VVLFEPQPLEFLRKNNAPVR 74

Query: 154 AQCDRKRV--LSSWAPYCRNSAPSEYQIQFS-SVRYLTPREF-VEKLSKELGVCGVVAGE 213
               R+++  +SS+      +  S   ++F+ S + L+ ++F +  L  +L +  +V G 
Sbjct: 75  ITKFREKIRRISSY------NFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFIVIGN 134

Query: 214 SYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQKVVNSANSKERGQVSSTRVRYAL 273
            +RFG++  G+   L KL  +Y      I+ +             K   ++SST +R AL
Sbjct: 135 DFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLY------------KNNIKISSTNIRKAL 186

Query: 274 SIGDMKYVSELLGR 275
           S  ++K  S LLGR
Sbjct: 195 SENNIKLASLLLGR 186

[Close]
BLAST of Lsi04G007880 vs. TrEMBL
Match: A0A0A0KPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.8e-179
Identity = 319/343 (93.00%), Postives = 329/343 (95.92%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRRV 60
           MLAAGVRVSHHLR+ DSHF FGLTSGL SSA LLFPPIWPRNPTS+FPSISHR SQ RRV
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHR-SQPRRV 60

Query: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTV 120
           SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS V
Sbjct: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMV 120

Query: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTP 180
           GSPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTP
Sbjct: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTP 180

Query: 181 REFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQKVV 240
           REFVEKLSKEL VCGVVAGESYRFGYKAAGDAAELVKLC EYGI AYIIKSVMDR+QKVV
Sbjct: 181 REFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVV 240

Query: 241 NSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSNSNSRVSAPRS 300
           NSANSKERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILM +GLEGFSNSN+RVSAPRS
Sbjct: 241 NSANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRS 300

Query: 301 CLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDI 344
           CLLNLAPKEGLY+ CFVCTTDENLIPCRV IDSTHVHIEMDDI
Sbjct: 301 CLLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDI 342

[Close]
BLAST of Lsi04G007880 vs. TrEMBL
Match: A0A151TQ72_CAJCA (Riboflavin biosynthesis protein ribF OS=Cajanus cajan GN=KK1_008422 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.7e-114
Identity = 226/351 (64.39%), Postives = 259/351 (73.79%), Query Frame = 1 

Query: 1   MLAAGV-RVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRR 60
           ML  GV R+S H RECD HF    T   T SA        P   T S P I+   +  R 
Sbjct: 1   MLGGGVSRISQHFRECDLHFHVPFTFTFTYSAS-------PTFHTPSSPRIAITATANRT 60

Query: 61  VSFFCSIVPSTSSGEIPVLSDCFGSREDDREV------SVAGGIVALGKFDALHVGHREL 120
            SF     PS SSGEIP+L D F  +ED+RE+      +VAGGIVALGKFDALH+GHREL
Sbjct: 61  RSF---ATPSKSSGEIPLLFDSFSQQEDEREILSDGRSAVAGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
           AIQAS  G PFLLSFVG+A+VLGWEPRAP+VA+CDR+RVLSSW  YC N  P E+Q+QFS
Sbjct: 121 AIQASRAGPPFLLSFVGMAKVLGWEPRAPVVAKCDRRRVLSSWVSYCCNMVPEEFQVQFS 180

Query: 181 SVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVM 240
           SVR+L+PR+FVEKL+KEL V GVVAGE+YRFGYKAAGDA ELVKLC EYG+ AYIIKSVM
Sbjct: 181 SVRHLSPRQFVEKLAKELSVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVM 240

Query: 241 DRSQKVVNS---ANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSN 300
           D+++  V+    ANSKERGQVSSTRVR AL++GDM+YVSELLGR HRLILM    E FS 
Sbjct: 241 DKNRCSVDMNSVANSKERGQVSSTRVREALAVGDMRYVSELLGRPHRLILMATDQERFST 300

Query: 301 SNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
              +VSAPRSCLLNLAPKEGLY KC +    EN++ CRVVIDS  VHIE D
Sbjct: 301 GQYKVSAPRSCLLNLAPKEGLYEKCSLFLDQENVVQCRVVIDSKFVHIETD 341

[Close]
BLAST of Lsi04G007880 vs. TrEMBL
Match: A0A059BG42_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 6.6e-113
Identity = 219/358 (61.17%), Postives = 264/358 (73.74%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDS-----HFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCS 60
           MLA+G R SHHLRECD          GL  GL  + ++    +  + P +S      R  
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  QRRRV---SFFCSIVPSTS-SGEIPVLSDCFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R R    S  CS VPS S  G +P+LSDCF  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIG 240
            E+QI+FS+VRYL+P +FVEKLSKELGV GVVAGE+YRFGYKAAGDA EL +LC E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDRSQKV--VNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTK 300
           AYIIKSVMD++Q+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++ TK
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
           G EGF +    +SAP+SCLLNLAPK+G Y  CFV    ENL+PC VVIDST +H+ MD
Sbjct: 301 GQEGFGSQKHSISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMD 358

[Close]
BLAST of Lsi04G007880 vs. TrEMBL
Match: I1LF92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 221/358 (61.73%), Postives = 257/358 (71.79%), Query Frame = 1 

Query: 1   MLAAGV-RVSHHLRECDSHFPFGLTSGLT-------SSAVLLFPPIWPRNPTSSFPSISH 60
           M+  GV R+SHH R+CD HF F  T   +       SS  L   P W     ++ PS   
Sbjct: 1   MVGGGVSRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKPRWGGISQTTVPS--- 60

Query: 61  RCSQRRRVSFFCSIVPSTSSGEIPVLSDCFGSREDDREV------SVAGGIVALGKFDAL 120
                   ++ C   P  S GEIP+L DCF  +E+DRE+      +VAGGIVALGKFDAL
Sbjct: 61  --------NYRCFGTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDAL 120

Query: 121 HVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPS 180
           H+GHRELAIQAS  G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P 
Sbjct: 121 HIGHRELAIQASRAGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPE 180

Query: 181 EYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGA 240
           E++++FSSVR+L PR+FVEKLSKEL V GVVAGE+YRFGYKAAGDA ELVKLC EYG+ A
Sbjct: 181 EFEVEFSSVRHLNPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEA 240

Query: 241 YIIKSVMDR---SQKVVNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTK 300
           YIIKSVMD+   S  + +  NSKERGQVSSTRVR AL++GD+KYVSELLGR HRLILM  
Sbjct: 241 YIIKSVMDKNRFSADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMAT 300

Query: 301 GLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
             E FS    +VSAPRSCLLNLAPKEGLY KC +    EN++ C VVIDS  VHIE D
Sbjct: 301 DQERFSTGQYKVSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETD 347

[Close]
BLAST of Lsi04G007880 vs. TrEMBL
Match: A0A0B2RY67_GLYSO (Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.5e-112
Identity = 221/358 (61.73%), Postives = 256/358 (71.51%), Query Frame = 1 

Query: 1   MLAAGV-RVSHHLRECDSHFPFGLTSGLT-------SSAVLLFPPIWPRNPTSSFPSISH 60
           M+  GV R+SHH R+CD HF F  T   +       SS  L   P W     +  PS   
Sbjct: 1   MVGGGVSRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKPRWGGISQTIVPS--- 60

Query: 61  RCSQRRRVSFFCSIVPSTSSGEIPVLSDCFGSREDDREV------SVAGGIVALGKFDAL 120
                   ++ C   P  S GEIP+L DCF  +E+DRE+      +VAGGIVALGKFDAL
Sbjct: 61  --------NYRCFGTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDAL 120

Query: 121 HVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPS 180
           H+GHRELAIQAS  G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P 
Sbjct: 121 HIGHRELAIQASRAGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPE 180

Query: 181 EYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGA 240
           E++++FSSVR+L PR+FVEKLSKEL V GVVAGE+YRFGYKAAGDA ELVKLC EYG+ A
Sbjct: 181 EFEVEFSSVRHLNPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEA 240

Query: 241 YIIKSVMDR---SQKVVNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTK 300
           YIIKSVMD+   S  + +  NSKERGQVSSTRVR AL++GD+KYVSELLGR HRLILM  
Sbjct: 241 YIIKSVMDKNRFSADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMAT 300

Query: 301 GLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
             E FS    +VSAPRSCLLNLAPKEGLY KC +    EN++ C VVIDS  VHIE D
Sbjct: 301 DQERFSTGQYKVSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETD 347

[Close]
BLAST of Lsi04G007880 vs. TAIR10
Match: AT5G08340.1 (AT5G08340.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 369.8 bits (948), Expect = 2.1e-102
Identity = 195/353 (55.24%), Postives = 252/353 (71.39%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISH--RCSQRR 60
           ML  G RV  HL + + H   GL  G   + ++     + R P+ +     H  R  ++R
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLR-PSQAMAKSHHFSRKLRQR 60

Query: 61  RVSFFCSIVPSTSSGEIPVLSDCFGSREDDREVSV------AGGIVALGKFDALHVGHRE 120
            +S F S     +SGE+P+L +CF  REDD E+ V      +GGIVALGKFDALH+GHRE
Sbjct: 61  MISSFGS--HCRTSGEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHRE 120

Query: 121 LAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQF 180
           L IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F
Sbjct: 121 LTIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEF 180

Query: 181 SSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSV 240
           +SVR+LTPR+FVEKLSKEL VCGVVAGE+YRFGYKA+GDA+ELV+LC E GI A II SV
Sbjct: 181 ASVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSV 240

Query: 241 MDRSQKVV--NSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSN 300
           MD  Q     +S +SK+RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +  +    
Sbjct: 241 MDMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQD--MP 300

Query: 301 SNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDI 344
           S   +S PRS +LNL P  G+Y  C +   DE+ +PC VV+D++++H+E +++
Sbjct: 301 SERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEV 348

[Close]
BLAST of Lsi04G007880 vs. TAIR10
Match: AT5G23330.1 (AT5G23330.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 338.6 bits (867), Expect = 5.2e-93
Identity = 186/354 (52.54%), Postives = 245/354 (69.21%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFP--PIWPRNPTSSFPSISHRCSQRR 60
           ML  G R S HL +   H P      L  S+ +L P   I  +   SSF S    C   R
Sbjct: 1   MLCGGSRASVHLWD-HRHPPRLGAKVLRKSSFMLRPCSAISQQRIKSSFRS---HCKTPR 60

Query: 61  RVSFFCSIVPSTSSGEIPVLSDCFGSREDDREVS------VAGGIVALGKFDALHVGHRE 120
           +               IP   DCF   +D  E+S      VAGGIVALGKFDALH+GHRE
Sbjct: 61  K---------------IPAPLDCFSQGDDHPELSAEGLSPVAGGIVALGKFDALHIGHRE 120

Query: 121 LAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQF 180
           LAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSSWA YC N AP E++I+F
Sbjct: 121 LAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSSWASYCGNIAPVEFEIEF 180

Query: 181 SSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSV 240
           +SVR+L P++FVEKLS+EL VCGVVAGE+YRFGY+A+GDA+ELV+LC ++GI AYII SV
Sbjct: 181 ASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASELVRLCKDFGISAYIINSV 240

Query: 241 MDRSQKVVNS----ANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGF 300
           MD++Q  VN+    + SKERGQVSSTRVR+AL+ GD++YV+ELLGR HR+I  T+  +  
Sbjct: 241 MDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTELLGRPHRVISRTR-TQDL 300

Query: 301 SNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDD 343
           ++   R+S   S LLNL P  G+Y  C +   D++ I C+V++D+++++IE ++
Sbjct: 301 TSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKVIVDTSNLYIETEE 334

[Close]
BLAST of Lsi04G007880 vs. NCBI nr
Match: gi|659090205|ref|XP_008445891.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 642.5 bits (1656), Expect = 4.8e-181
Identity = 321/343 (93.59%), Postives = 330/343 (96.21%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRRV 60
           MLAA VRVSHHLRE DSHF FGLTSGLTSSA+LLFPPIWPRNPTS+FPSISHR SQ RRV
Sbjct: 1   MLAASVRVSHHLREFDSHFAFGLTSGLTSSAILLFPPIWPRNPTSNFPSISHR-SQPRRV 60

Query: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTV 120
           SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS V
Sbjct: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMV 120

Query: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTP 180
           GSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYC+NSAPSEYQIQFSSVRYLTP
Sbjct: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCQNSAPSEYQIQFSSVRYLTP 180

Query: 181 REFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQKVV 240
           REFVEKLSKEL VCGVVAGESYRFGYKAAGDAAELVKLC EYGI AYIIKSVMDR+QKVV
Sbjct: 181 REFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVV 240

Query: 241 NSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSNSNSRVSAPRS 300
           NSANSKERGQVSSTRVR+ALSIGDMKYVSELLGRRHRLILM KGLEGFSN+NSRVSAPRS
Sbjct: 241 NSANSKERGQVSSTRVRHALSIGDMKYVSELLGRRHRLILMAKGLEGFSNTNSRVSAPRS 300

Query: 301 CLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDI 344
           CLLNL+PKEG Y+ CF+CTTDENLIPCRV IDSTHVHIEMDDI
Sbjct: 301 CLLNLSPKEGFYNNCFLCTTDENLIPCRVAIDSTHVHIEMDDI 342

[Close]
BLAST of Lsi04G007880 vs. NCBI nr
Match: gi|449458746|ref|XP_004147108.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 636.7 bits (1641), Expect = 2.6e-179
Identity = 319/343 (93.00%), Postives = 329/343 (95.92%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRRV 60
           MLAAGVRVSHHLR+ DSHF FGLTSGL SSA LLFPPIWPRNPTS+FPSISHR SQ RRV
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHR-SQPRRV 60

Query: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTV 120
           SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS V
Sbjct: 61  SFFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMV 120

Query: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTP 180
           GSPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTP
Sbjct: 121 GSPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTP 180

Query: 181 REFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVMDRSQKVV 240
           REFVEKLSKEL VCGVVAGESYRFGYKAAGDAAELVKLC EYGI AYIIKSVMDR+QKVV
Sbjct: 181 REFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVV 240

Query: 241 NSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSNSNSRVSAPRS 300
           NSANSKERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILM +GLEGFSNSN+RVSAPRS
Sbjct: 241 NSANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRS 300

Query: 301 CLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMDDI 344
           CLLNLAPKEGLY+ CFVCTTDENLIPCRV IDSTHVHIEMDDI
Sbjct: 301 CLLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDI 342

[Close]
BLAST of Lsi04G007880 vs. NCBI nr
Match: gi|1012358050|gb|KYP69234.1| (Riboflavin biosynthesis protein ribF [Cajanus cajan])

HSP 1 Score: 420.2 bits (1079), Expect = 3.9e-114
Identity = 226/351 (64.39%), Postives = 259/351 (73.79%), Query Frame = 1 

Query: 1   MLAAGV-RVSHHLRECDSHFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCSQRRR 60
           ML  GV R+S H RECD HF    T   T SA        P   T S P I+   +  R 
Sbjct: 1   MLGGGVSRISQHFRECDLHFHVPFTFTFTYSAS-------PTFHTPSSPRIAITATANRT 60

Query: 61  VSFFCSIVPSTSSGEIPVLSDCFGSREDDREV------SVAGGIVALGKFDALHVGHREL 120
            SF     PS SSGEIP+L D F  +ED+RE+      +VAGGIVALGKFDALH+GHREL
Sbjct: 61  RSF---ATPSKSSGEIPLLFDSFSQQEDEREILSDGRSAVAGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
           AIQAS  G PFLLSFVG+A+VLGWEPRAP+VA+CDR+RVLSSW  YC N  P E+Q+QFS
Sbjct: 121 AIQASRAGPPFLLSFVGMAKVLGWEPRAPVVAKCDRRRVLSSWVSYCCNMVPEEFQVQFS 180

Query: 181 SVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGAYIIKSVM 240
           SVR+L+PR+FVEKL+KEL V GVVAGE+YRFGYKAAGDA ELVKLC EYG+ AYIIKSVM
Sbjct: 181 SVRHLSPRQFVEKLAKELSVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVM 240

Query: 241 DRSQKVVNS---ANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTKGLEGFSN 300
           D+++  V+    ANSKERGQVSSTRVR AL++GDM+YVSELLGR HRLILM    E FS 
Sbjct: 241 DKNRCSVDMNSVANSKERGQVSSTRVREALAVGDMRYVSELLGRPHRLILMATDQERFST 300

Query: 301 SNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
              +VSAPRSCLLNLAPKEGLY KC +    EN++ CRVVIDS  VHIE D
Sbjct: 301 GQYKVSAPRSCLLNLAPKEGLYEKCSLFLDQENVVQCRVVIDSKFVHIETD 341

[Close]
BLAST of Lsi04G007880 vs. NCBI nr
Match: gi|702430838|ref|XP_010068804.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 415.6 bits (1067), Expect = 9.5e-113
Identity = 219/358 (61.17%), Postives = 264/358 (73.74%), Query Frame = 1 

Query: 1   MLAAGVRVSHHLRECDS-----HFPFGLTSGLTSSAVLLFPPIWPRNPTSSFPSISHRCS 60
           MLA+G R SHHLRECD          GL  GL  + ++    +  + P +S      R  
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  QRRRV---SFFCSIVPSTS-SGEIPVLSDCFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R R    S  CS VPS S  G +P+LSDCF  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIG 240
            E+QI+FS+VRYL+P +FVEKLSKELGV GVVAGE+YRFGYKAAGDA EL +LC E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDRSQKV--VNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTK 300
           AYIIKSVMD++Q+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++ TK
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
           G EGF +    +SAP+SCLLNLAPK+G Y  CFV    ENL+PC VVIDST +H+ MD
Sbjct: 301 GQEGFGSQKHSISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMD 358

[Close]
BLAST of Lsi04G007880 vs. NCBI nr
Match: gi|356534452|ref|XP_003535768.1| (PREDICTED: FAD synthetase 1, chloroplastic [Glycine max])

HSP 1 Score: 414.8 bits (1065), Expect = 1.6e-112
Identity = 221/358 (61.73%), Postives = 257/358 (71.79%), Query Frame = 1 

Query: 1   MLAAGV-RVSHHLRECDSHFPFGLTSGLT-------SSAVLLFPPIWPRNPTSSFPSISH 60
           M+  GV R+SHH R+CD HF F  T   +       SS  L   P W     ++ PS   
Sbjct: 1   MVGGGVSRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKPRWGGISQTTVPS--- 60

Query: 61  RCSQRRRVSFFCSIVPSTSSGEIPVLSDCFGSREDDREV------SVAGGIVALGKFDAL 120
                   ++ C   P  S GEIP+L DCF  +E+DRE+      +VAGGIVALGKFDAL
Sbjct: 61  --------NYRCFGTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDAL 120

Query: 121 HVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPS 180
           H+GHRELAIQAS  G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P 
Sbjct: 121 HIGHRELAIQASRAGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPE 180

Query: 181 EYQIQFSSVRYLTPREFVEKLSKELGVCGVVAGESYRFGYKAAGDAAELVKLCGEYGIGA 240
           E++++FSSVR+L PR+FVEKLSKEL V GVVAGE+YRFGYKAAGDA ELVKLC EYG+ A
Sbjct: 181 EFEVEFSSVRHLNPRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEA 240

Query: 241 YIIKSVMDR---SQKVVNSANSKERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMTK 300
           YIIKSVMD+   S  + +  NSKERGQVSSTRVR AL++GD+KYVSELLGR HRLILM  
Sbjct: 241 YIIKSVMDKNRFSADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMAT 300

Query: 301 GLEGFSNSNSRVSAPRSCLLNLAPKEGLYSKCFVCTTDENLIPCRVVIDSTHVHIEMD 342
             E FS    +VSAPRSCLLNLAPKEGLY KC +    EN++ C VVIDS  VHIE D
Sbjct: 301 DQERFSTGQYKVSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETD 347

The following BLAST results are available for this feature:
BLAST of Lsi04G007880 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RIBF2_ARATH3.7e-10155.24FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1[more]
RIBF1_ARATH9.3e-9252.54FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1[more]
RIBF_ORYSJ6.9e-8760.44FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1[more]
RIBF_BUCAI4.6e-0626.29Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon... [more]
BLAST of Lsi04G007880 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPQ8_CUCSA1.8e-17993.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1[more]
A0A151TQ72_CAJCA2.7e-11464.39Riboflavin biosynthesis protein ribF OS=Cajanus cajan GN=KK1_008422 PE=4 SV=1[more]
A0A059BG42_EUCGR6.6e-11361.17Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1[more]
I1LF92_SOYBN1.1e-11261.73Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1[more]
A0A0B2RY67_GLYSO2.5e-11261.73Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1[more]
BLAST of Lsi04G007880 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08340.12.1e-10255.24 Nucleotidylyl transferase superfamily protein[more]
AT5G23330.15.2e-9352.54 Nucleotidylyl transferase superfamily protein[more]
BLAST of Lsi04G007880 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090205|ref|XP_008445891.1|4.8e-18193.59PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo][more]
gi|449458746|ref|XP_004147108.1|2.6e-17993.00PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus][more]
gi|1012358050|gb|KYP69234.1|3.9e-11464.39Riboflavin biosynthesis protein ribF [Cajanus cajan][more]
gi|702430838|ref|XP_010068804.1|9.5e-11361.17PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis][more]
gi|356534452|ref|XP_003535768.1|1.6e-11261.73PREDICTED: FAD synthetase 1, chloroplastic [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003919FMN adenylyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR015864FAD_synthase
IPR014729Rossmann-like_a/b/a_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0032259 methylation
biological_process GO:0044237 cellular metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016459 myosin complex
molecular_function GO:0003919 FMN adenylyltransferase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003774 motor activity
molecular_function GO:0005515 protein binding
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G007880.1Lsi04G007880.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 94..274
score: 9.6
IPR015864FAD synthetasePFAMPF06574FAD_syncoord: 175..241
score: 1.
NoneNo IPR availablePANTHERPTHR12714PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 7..351
score: 1.0E
NoneNo IPR availablePANTHERPTHR12714:SF4FAD SYNTHETASE RIBF1coord: 7..351
score: 1.0E
NoneNo IPR availableunknownSSF52374Nucleotidylyl transferasecoord: 97..275
score: 2.58