Cp4.1LG01g10210 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g10210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Riboflavin biosynthesis protein, putative, expressed
Location	Cp4.1LG01 : 6873604 .. 6877544 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGTTTAAAATAAACATAAATACGCTAAAATTACAACGTTGAAAGGGTACAGTGAAAGTCTGCGCCTCTCATTACTCCCCACTTGCCGCCTCCACTCGGTCCCAAGCGGCTGGCGATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACCTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGGTACTTTCCCATTTCATGTCCTTCGATTTCTTATCGCTGTCCGTGTTGTTTTCTTGCTAACTACAAATTTACCAATTGGCGTTTTGTTTCCCAGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGTTTGTTTTCCTTTGTTGTTTCTATTTTCTCCTGAATCTGTCGTTAATTTTATGGAAGAATGCTAATTCTTATCTTCGTCTTAATTTTCCGCTTATTTAATGTGTAGGAAGTTTGTGGTGATTTTGGGTTAGATTGAAGTTGAACAACCTTTTGATTATATGGCTGTGTACTTATAATGTATGTTCTAAGTAGCTCTGATTTATATGCAATACATTAGAATGGGGGTTTTTTTTTTTCTCTTAAAGATTCAAGCCCCCAAAAGGGAGTGGGAGCAAAACGTAACTCCCGAATAAAGACAAGGCTTCAAATGTTAGAAGAGTTTAAAAATAAAACATTAATGAACTAAGCGCCTAAGATCTTGACACCATCGATGATCCTAAGATTTAGGCTGTTGATGCGTGTTTGTTTTACTTAATGGTCAAACAGTTGATGTGCTTAGAAAATAATTGATGGGCTAACATAGCAAGTAGGAATGGAATATAATACACTTATGTGATGTCCCACGTTGGTTGGGGAGGAGAACAAACCACCATTTATAAGCGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAAGGGAAACCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACACTTACGAAGTCACCAACTTGAGAGCAAGTAGCCAAAGCTTAAATATTGTTTATTTTAATAAAAAGAAACCAAGATTTCAATAAAAAAAAAATGAAAGGATCCAAAAGAGGCTACAAAATGGACAACCGAACAAAAGGAGTTGGTCAGATGGGTGTTTAGTAGCTTTGATTGATAGTCTTAGGAATGTAAGTCATGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTCTCATGGCTTTGTTTTGGGTTTTCTCAAAAGGCCTCATACCGATGGAGATGTATTCCTTACTCATAAACCCATGCTCATTACTCCCTCCTAATAATCCCCAACAAGTCATAGTATTAGATGAATTCTTGTCTTCTAGCTCTAGTTACTCCAGTTTGGGTATTATGTGAGAAGGTTTTTTTTCCCCTTCTTTTGGATTAGCTTGCTATAAGAAAGTTCGTTCAGTTGTGAAAAGATCATTTTCTCCTATTATTTGTAGTTTGGTTAGTCTGAGACTGGTTTTTATGATCATTTTTTTTTTGTCACTCATAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCGAGGTAAGCAAAATGCGTTTTCTTTATGTTACTTATTGTTTGTTTCGTCATAAATGGTAGGAAATTCACATCTGACAATGACCTTACAAAATAAAATTTTATGCAGTTTTGATTGTTTTCTAAAGTTCTTACTTATTCCATGGGCAAATATATGCAACTACCCGATATTTCCCTGTGGAAGATTTGCCCATTCTAATTGAATTTGGTTCCAACAACATTTGTAACATTAGTAATTCACATTGAGTTTCCAATGGAAGTCTTGCAAGTTATAAAGGTGTAGTTATTATCCTAGAACATTAAGTTGATGGCAAGCAAGAATTAGCGTGTGCAGCAACAGCAGAAAGAAAGCAAAGCACTCAACATTATGGTTGGCTGTCAACGATCTGCAGCAAAGAATGGAGGAAAGATTTGAGGTCACTGATCGAGATATTCAACGTAGTTTAACAGCAATTGAGCAATTTGTTGTTCAAGGATACAAGTTCCCAAAAGGAAACAAAAATTGAAAGAAATAAAGAAAACAGGAGAGTATAACAAGAACATATAGCTAAAAACAAGCAAGAACAGTATCTTCAAAATGACAAACTAAAGCTCTTTCAATTGGAATGTCTGGCTATCACCATGTGAGAATCAGGACGAGGCTTTGAATACCATCTGTTATATTAACTGAGGATTTGTAATGAAGGTGTTGAGTTTATTCAATTGCAGATCTCTAATCTCTTTCCTTTGTTCTGAACATGTACTTAGAATTATAGTCTTGGAGTTAATTATTTATCTGTTAGTTAATTGAACAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTAAATTAAATTAAGATGTGTAGTACAAGTCTTTATTGATAAATCTTGGACTTGAGTAAAGTGTGATCGTTTCGAGGCTTTGATCGACGATGGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACACAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAAGTGTCATCTACTCGGGTTCGCTACGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAATAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCGCCAAAAGAAGGTCTCTATAATAAGTGTTTCATCTGTACAAGTGACGATGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGACGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGATCATGTTCAATTCGCCTCCTGGAATTCCTTGATGAGATCACTTATCCACAAACTAAAATGTCGGATCCCAGAGATTCTGGATTATATGCATCAGAGAGATTCATATCTATTCTTACAAAGAGGTATGGAGCTTGTTTCAGCAATTATGTTCTAAATATTTGCAGACACGAAACACGGGTCACGGGCCGATGTGGGTAATGCTTCATCATTTACAGCTGGTTCTGTGAAGAAACACTACTTATTTTGGCAGGAAAAGCTCAATAGTTCCTTTCAGCTGTCCGACAGATGCATATGACCCGAAGGTACTTTTATATGTATTAACTAAAGCACGTTGTTTGCAAGGAATTATTATATTTATGTCTCTATGTTCATTTATCTGGAAACAAATAACTCAGAGGCATCGTTTTCTGTTGGCACTGTACATGATATCTATAATTTATTTAGGGACAAATAGCTTGGAAGTTTTCTTTTTTTTTCTACATATCAAAAGCTGTTGAACCCATTTTGAGTTCTAACATAAAATTTAGACCCTGTTC

mRNA sequence

AGCGTTTAAAATAAACATAAATACGCTAAAATTACAACGTTGAAAGGGTACAGTGAAAGTCTGCGCCTCTCATTACTCCCCACTTGCCGCCTCCACTCGGTCCCAAGCGGCTGGCGATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACCTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCGAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACACAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAAGTGTCATCTACTCGGGTTCGCTACGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAATAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCGCCAAAAGAAGGTCTCTATAATAAGTGTTTCATCTGTACAAGTGACGATGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGACGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGATCATGTTCAATTCGCCTCCTGGAATTCCTTGATGAGATCACTTATCCACAAACTAAAATGTCGGATCCCAGAGATTCTGGATTATATGCATCAGAGAGATTCATATCTATTCTTACAAAGAGGTATGGAGCTTGTTTCAGCAATTATGTTCTAAATATTTGCAGACACGAAACACGGGTCACGGGCCGATGTGGGTAATGCTTCATCATTTACAGCTGGTTCTGTGAAGAAACACTACTTATTTTGGCAGGAAAAGCTCAATAGTTCCTTTCAGCTGTCCGACAGATGCATATGACCCGAAGGTACTTTTATATGTATTAACTAAAGCACGTTGTTTGCAAGGAATTATTATATTTATGTCTCTATGTTCATTTATCTGGAAACAAATAACTCAGAGGCATCGTTTTCTGTTGGCACTGTACATGATATCTATAATTTATTTAGGGACAAATAGCTTGGAAGTTTTCTTTTTTTTTCTACATATCAAAAGCTGTTGAACCCATTTTGAGTTCTAACATAAAATTTAGACCCTGTTC

Coding sequence (CDS)

ATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACCTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCGAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCGGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACACAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAAGTGTCATCTACTCGGGTTCGCTACGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAATAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCGCCAAAAGAAGGTCTCTATAATAAGTGTTTCATCTGTACAAGTGACGATGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGACGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGA

Protein sequence

MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQKVVNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEFDHEGA

Homology

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BLAST of Cp4.1LG01g10210 vs. Swiss-Prot
Match: RIBF2_ARATH (FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.8e-97
Identity = 193/372 (51.88%), Postives = 256/372 (68.82%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPS--ISRRSQPRG 60
           ML  G+RV  HL + +     GL  G     +V     + R   +   S   SR+ + R 
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRM 60

Query: 61  VSFFCSIIPSTSPGEIPVISDSFGSREDDREVSV------AGGIVALGKFDALHVGHREL 120
           +S F S   ++  GE+P++ + F  REDD E+ V      +GGIVALGKFDALH+GHREL
Sbjct: 61  ISSFGSHCRTS--GEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
            IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F+
Sbjct: 121 TIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFA 180

Query: 181 SVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVM 240
           SVR+LTPR+FVEKLSKEL V GVVAGE+YRFGYKA+GDA+ELV+LCEE G+ A II SVM
Sbjct: 181 SVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVM 240

Query: 241 DTNQKVV--NSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS 300
           D  Q     +S +S +RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +      + 
Sbjct: 241 DMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVR----TQDM 300

Query: 301 NSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPV 360
            S   +S P+S +LNL P  G+Y  C +   D+  +PC VV+D++++H+E +++   +  
Sbjct: 301 PSERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEVRLCNLD 360

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BLAST of Cp4.1LG01g10210 vs. Swiss-Prot
Match: RIBF_ORYSJ (FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.4e-88
Identity = 166/274 (60.58%), Postives = 210/274 (76.64%), Query Frame = 1


Query: 92  VAGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRV 151
           V  GIVALGKFDALH+GHRELA+ AS  G+PFLLSFVGIAEVLGWE R PIVAQCDRKRV
Sbjct: 122 VIDGIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRV 181

Query: 152 LSSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDA 211
           L+SWAPYC+N  P EYQ++FS VRYLTPR+FVE+LS++L ++GVVAGE+YRFGY+A+GDA
Sbjct: 182 LTSWAPYCKNVVPIEYQVEFSKVRYLTPRQFVERLSRDLKIQGVVAGENYRFGYRASGDA 241

Query: 212 AELVKLCEEYGLGAYIIKSVMDTNQK---VVNSTNSMERGQVSSTRVRYALSIGDMKYVS 271
           AELVKLCEE+GL A+I++SVMDT +    V  S NS ++GQVSS+RVR+AL++GDM+YVS
Sbjct: 242 AELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAMGDMEYVS 301

Query: 272 ELLGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPC 331
           ELLGR+HRL+L  K     ++     R+  PKSC+LN+ P +GLY  C +  +   L  C
Sbjct: 302 ELLGRKHRLVLTVKE----NHLQERKRIMLPKSCMLNMPPADGLYENCDL-LNGGHLGLC 361

Query: 332 RVVIDSTHVHIEMDDIGTRHP--VGTQNYLSVEF 361
           RV+I+S  + IEM D  +  P  +     L +EF
Sbjct: 362 RVIINSETIVIEMKDENSLLPNTIQENQQLGIEF 390

[Close]

BLAST of Cp4.1LG01g10210 vs. Swiss-Prot
Match: RIBF1_ARATH (FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.2e-87
Identity = 176/332 (53.01%), Postives = 235/332 (70.78%), Query Frame = 1


Query: 41  RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREVS------VAG 100
           RK +      S  SQ R  S F S     +P +IP   D F   +D  E+S      VAG
Sbjct: 27  RKSSFMLRPCSAISQQRIKSSFRS--HCKTPRKIPAPLDCFSQGDDHPELSAEGLSPVAG 86

Query: 101 GIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSS 160
           GIVALGKFDALH+GHRELAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSS
Sbjct: 87  GIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSS 146

Query: 161 WAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAEL 220
           WA YC N AP E++I+F+SVR+L P++FVEKLS+EL V GVVAGE+YRFGY+A+GDA+EL
Sbjct: 147 WASYCGNIAPVEFEIEFASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASEL 206

Query: 221 VKLCEEYGLGAYIIKSVMDTNQKVVNS----TNSMERGQVSSTRVRYALSIGDMKYVSEL 280
           V+LC+++G+ AYII SVMD NQ  VN+    + S ERGQVSSTRVR+AL+ GD++YV+EL
Sbjct: 207 VRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTEL 266

Query: 281 LGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRV 340
           LGR HR+I   +  +    ++   R+S   S LLNL P  G+Y  C +   D   I C+V
Sbjct: 267 LGRPHRVISRTRTQD---LTSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKV 326

Query: 341 VIDSTHVHIEMDDIGTRHPVGTQNY--LSVEF 361
           ++D+++++IE ++    +   +Q +  L +EF
Sbjct: 327 IVDTSNLYIETEEERFHNSDESQEFQLLGIEF 353

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BLAST of Cp4.1LG01g10210 vs. Swiss-Prot
Match: RIBF_BUCAI (Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=ribF PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-07
Identity = 52/194 (26.80%), Postives = 95/194 (48.97%), Query Frame = 1


Query: 93  AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPR---------APIV 152
           +  +V +G FD +H+GH++L      +G  + LS +    V+ +EP+         AP+ 
Sbjct: 15  SNSVVTIGNFDGIHLGHQKLFSHIYQIGQKYKLSTI----VVLFEPQPLEFLRKNNAPVR 74

Query: 153 AQCDRKRV--LSSWAPYCRNSAPSEYQIQFS-SVRYLTPREF-VEKLSKELGVRGVVAGE 212
               R+++  +SS+      +  S   ++F+ S + L+ ++F +  L  +L ++ +V G 
Sbjct: 75  ITKFREKIRRISSY------NFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFIVIGN 134

Query: 213 SYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQKVVNSTNSMERGQVSSTRVRYAL 272
            +RFG++  G+   L KL  +Y      I+ +   N K            +SST +R AL
Sbjct: 135 DFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIK------------ISSTNIRKAL 186

Query: 273 SIGDMKYVSELLGR 274
           S  ++K  S LLGR
Sbjct: 195 SENNIKLASLLLGR 186

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BLAST of Cp4.1LG01g10210 vs. TrEMBL
Match: A0A0A0KPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1)

HSP 1 Score: 620.9 bits (1600), Expect = 9.7e-175
Identity = 312/363 (85.95%), Postives = 331/363 (91.18%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAAG RVSHHLR+ DS F FGLTSGL S   +LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMD NQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSRVSAPK 300
           S NS ERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILMA+GLEG   SNSN+RVSAP+
Sbjct: 241 SANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGF--SNSNNRVSAPR 300

Query: 301 SCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEF 360
           SCLLNLAPKEGLYN CF+CT+D++LIPCRV IDSTHVHIEMDDIGT H VGTQ+ ++VEF
Sbjct: 301 SCLLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEF 360

Query: 361 DHE 364
             E
Sbjct: 361 GDE 361

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BLAST of Cp4.1LG01g10210 vs. TrEMBL
Match: M5XY96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.3e-112
Identity = 234/394 (59.39%), Postives = 282/394 (71.57%), Query Frame = 1


Query: 1   MLAAG---ARVSHHLR--ECDSQ---------------FGFGLTSGLTSFPVVLFPPIWS 60
           ML+ G   +R+S+HLR  +CD +               FGFG   G     V  +    +
Sbjct: 1   MLSGGGGCSRLSNHLRLRDCDVRLHHQHLGSGSGSAFGFGFGFVFGFGLGRVGFYNNRVA 60

Query: 61  --RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREV------SV 120
             R     F  +S    P     F S + S SP +IP +S+ F  RED+RE+      SV
Sbjct: 61  QLRCCPCPFKPLSAHRMP-----FSSFVSSKSPPDIPTLSNCFSQREDERELFSEGLTSV 120

Query: 121 AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVL 180
           AGGIVALGKFDALH+GHRELAIQAS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVL
Sbjct: 121 AGGIVALGKFDALHIGHRELAIQASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVL 180

Query: 181 SSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAA 240
           SSWAPYC N AP+E+QI+FSSVR+LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA 
Sbjct: 181 SSWAPYCGNMAPTEFQIEFSSVRHLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDAT 240

Query: 241 ELVKLCEEYGLGAYIIKSVMDTNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSEL 300
           ELV+LCEEYG+GAYII SVMD N     +NS++  +RGQVSSTRVR AL++GDMKYVS+L
Sbjct: 241 ELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQL 300

Query: 301 LGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFI-CTSDDDLIPCR 360
           LGR+HRLILMAK  EG       +++S PKSCLLNL PKEGLY KC++    DD+L+ C 
Sbjct: 301 LGRQHRLILMAKEQEGF--RCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIGEDDELLSCN 360

[Close]

BLAST of Cp4.1LG01g10210 vs. TrEMBL
Match: A0A059BG42_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 5.2e-112
Identity = 220/380 (57.89%), Postives = 275/380 (72.37%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQ-----FGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQ 60
           MLA+G R SHHLRECD        G GL  GL    +V    +  + P ++      R +
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  PRG----VSFFCSIIPSTSPGE-IPVISDSFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R      S  CS +PS S G  +P++SD F  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLG 240
            E+QI+FS+VRYL+P +FVEKLSKELGVRGVVAGE+YRFGYKAAGDA EL +LC+E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDTNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAK 300
           AYIIKSVMD NQ+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++  K
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMD 360
           G EG  +   +  +SAPKSCLLNLAPK+G Y+ CF+    ++L+PC VVIDST +H+ MD
Sbjct: 301 GQEGFGSQKHS--ISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMD 360

[Close]

BLAST of Cp4.1LG01g10210 vs. TrEMBL
Match: I1LF92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.6e-111
Identity = 222/367 (60.49%), Postives = 267/367 (72.75%), Query Frame = 1


Query: 6   ARVSHHLRECDSQFGFGLTSGLTSFPVV-LFPPIWSRKPTSNFPSISRRSQPRGVSFFCS 65
           +R+SHH R+CD  F F  T   ++F    L  P    KP   +  IS+ + P   ++ C 
Sbjct: 7   SRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKP--RWGGISQTTVPS--NYRCF 66

Query: 66  IIPSTSPGEIPVISDSFGSREDDREV------SVAGGIVALGKFDALHVGHRELAIQAST 125
             P  SPGEIP++ D F  +E+DRE+      +VAGGIVALGKFDALH+GHRELAIQAS 
Sbjct: 67  GTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHRELAIQASR 126

Query: 126 VGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLT 185
            G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P E++++FSSVR+L 
Sbjct: 127 AGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVEFSSVRHLN 186

Query: 186 PREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQ-- 245
           PR+FVEKLSKEL VRGVVAGE+YRFGYKAAGDA ELVKLCEEYG+ AYIIKSVMD N+  
Sbjct: 187 PRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVMDKNRFS 246

Query: 246 -KVVNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSR 305
             + + TNS ERGQVSSTRVR AL++GD+KYVSELLGR HRLILMA   E    S    +
Sbjct: 247 ADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMATDQERF--STGQYK 306

Query: 306 VSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN- 361
           VSAP+SCLLNLAPKEGLY KC +    ++++ C VVIDS  VHIE D  G      +QN 
Sbjct: 307 VSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETDYGGLSDIFCSQNL 366

[Close]

BLAST of Cp4.1LG01g10210 vs. TrEMBL
Match: A0A0B2RY67_GLYSO (Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 5.8e-111
Identity = 222/367 (60.49%), Postives = 266/367 (72.48%), Query Frame = 1


Query: 6   ARVSHHLRECDSQFGFGLTSGLTSFPVV-LFPPIWSRKPTSNFPSISRRSQPRGVSFFCS 65
           +R+SHH R+CD  F F  T   ++F    L  P    KP   +  IS+   P   ++ C 
Sbjct: 7   SRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKP--RWGGISQTIVPS--NYRCF 66

Query: 66  IIPSTSPGEIPVISDSFGSREDDREV------SVAGGIVALGKFDALHVGHRELAIQAST 125
             P  SPGEIP++ D F  +E+DRE+      +VAGGIVALGKFDALH+GHRELAIQAS 
Sbjct: 67  GTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHRELAIQASR 126

Query: 126 VGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLT 185
            G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P E++++FSSVR+L 
Sbjct: 127 AGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVEFSSVRHLN 186

Query: 186 PREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQ-- 245
           PR+FVEKLSKEL VRGVVAGE+YRFGYKAAGDA ELVKLCEEYG+ AYIIKSVMD N+  
Sbjct: 187 PRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVMDKNRFS 246

Query: 246 -KVVNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSR 305
             + + TNS ERGQVSSTRVR AL++GD+KYVSELLGR HRLILMA   E    S    +
Sbjct: 247 ADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMATDQERF--STGQYK 306

Query: 306 VSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN- 361
           VSAP+SCLLNLAPKEGLY KC +    ++++ C VVIDS  VHIE D  G      +QN 
Sbjct: 307 VSAPRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETDYGGLSDIFCSQNL 366

[Close]

BLAST of Cp4.1LG01g10210 vs. TAIR10
Match: AT5G08340.1 (AT5G08340.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 355.5 bits (911), Expect = 3.8e-98
Identity = 193/372 (51.88%), Postives = 256/372 (68.82%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPS--ISRRSQPRG 60
           ML  G+RV  HL + +     GL  G     +V     + R   +   S   SR+ + R 
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRM 60

Query: 61  VSFFCSIIPSTSPGEIPVISDSFGSREDDREVSV------AGGIVALGKFDALHVGHREL 120
           +S F S   ++  GE+P++ + F  REDD E+ V      +GGIVALGKFDALH+GHREL
Sbjct: 61  ISSFGSHCRTS--GEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
            IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F+
Sbjct: 121 TIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFA 180

Query: 181 SVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVM 240
           SVR+LTPR+FVEKLSKEL V GVVAGE+YRFGYKA+GDA+ELV+LCEE G+ A II SVM
Sbjct: 181 SVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVM 240

Query: 241 DTNQKVV--NSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS 300
           D  Q     +S +S +RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +      + 
Sbjct: 241 DMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVR----TQDM 300

Query: 301 NSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPV 360
            S   +S P+S +LNL P  G+Y  C +   D+  +PC VV+D++++H+E +++   +  
Sbjct: 301 PSERMISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEVRLCNLD 360

[Close]

BLAST of Cp4.1LG01g10210 vs. TAIR10
Match: AT5G23330.1 (AT5G23330.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 323.9 bits (829), Expect = 1.2e-88
Identity = 176/332 (53.01%), Postives = 235/332 (70.78%), Query Frame = 1


Query: 41  RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREVS------VAG 100
           RK +      S  SQ R  S F S     +P +IP   D F   +D  E+S      VAG
Sbjct: 27  RKSSFMLRPCSAISQQRIKSSFRS--HCKTPRKIPAPLDCFSQGDDHPELSAEGLSPVAG 86

Query: 101 GIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSS 160
           GIVALGKFDALH+GHRELAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSS
Sbjct: 87  GIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSS 146

Query: 161 WAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAEL 220
           WA YC N AP E++I+F+SVR+L P++FVEKLS+EL V GVVAGE+YRFGY+A+GDA+EL
Sbjct: 147 WASYCGNIAPVEFEIEFASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASEL 206

Query: 221 VKLCEEYGLGAYIIKSVMDTNQKVVNS----TNSMERGQVSSTRVRYALSIGDMKYVSEL 280
           V+LC+++G+ AYII SVMD NQ  VN+    + S ERGQVSSTRVR+AL+ GD++YV+EL
Sbjct: 207 VRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTEL 266

Query: 281 LGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRV 340
           LGR HR+I   +  +    ++   R+S   S LLNL P  G+Y  C +   D   I C+V
Sbjct: 267 LGRPHRVISRTRTQD---LTSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKV 326

Query: 341 VIDSTHVHIEMDDIGTRHPVGTQNY--LSVEF 361
           ++D+++++IE ++    +   +Q +  L +EF
Sbjct: 327 IVDTSNLYIETEEERFHNSDESQEFQLLGIEF 353

[Close]

BLAST of Cp4.1LG01g10210 vs. NCBI nr
Match: gi|659090205|ref|XP_008445891.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 626.3 bits (1614), Expect = 3.3e-176
Identity = 313/360 (86.94%), Postives = 331/360 (91.94%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAA  RVSHHLRE DS F FGLTSGLTS  ++LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAASVRVSHHLREFDSHFAFGLTSGLTSSAILLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYC+NSAPSEYQIQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCQNSAPSEYQIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMD NQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSRVSAPK 300
           S NS ERGQVSSTRVR+ALSIGDMKYVSELLGRRHRLILMAKGLEG   SN+NSRVSAP+
Sbjct: 241 SANSKERGQVSSTRVRHALSIGDMKYVSELLGRRHRLILMAKGLEGF--SNTNSRVSAPR 300

Query: 301 SCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEF 360
           SCLLNL+PKEG YN CF+CT+D++LIPCRV IDSTHVHIEMDDIGT H VGTQ+ +++EF
Sbjct: 301 SCLLNLSPKEGFYNNCFLCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDCVNIEF 358

[Close]

BLAST of Cp4.1LG01g10210 vs. NCBI nr
Match: gi|449458746|ref|XP_004147108.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 620.9 bits (1600), Expect = 1.4e-174
Identity = 312/363 (85.95%), Postives = 331/363 (91.18%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAAG RVSHHLR+ DS F FGLTSGL S   +LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMD NQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSNSRVSAPK 300
           S NS ERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILMA+GLEG   SNSN+RVSAP+
Sbjct: 241 SANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGF--SNSNNRVSAPR 300

Query: 301 SCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEF 360
           SCLLNLAPKEGLYN CF+CT+D++LIPCRV IDSTHVHIEMDDIGT H VGTQ+ ++VEF
Sbjct: 301 SCLLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEF 360

Query: 361 DHE 364
             E
Sbjct: 361 GDE 361

[Close]

BLAST of Cp4.1LG01g10210 vs. NCBI nr
Match: gi|596166958|ref|XP_007223021.1| (hypothetical protein PRUPE_ppa006865mg [Prunus persica])

HSP 1 Score: 413.7 bits (1062), Expect = 3.4e-112
Identity = 234/394 (59.39%), Postives = 282/394 (71.57%), Query Frame = 1


Query: 1   MLAAG---ARVSHHLR--ECDSQ---------------FGFGLTSGLTSFPVVLFPPIWS 60
           ML+ G   +R+S+HLR  +CD +               FGFG   G     V  +    +
Sbjct: 1   MLSGGGGCSRLSNHLRLRDCDVRLHHQHLGSGSGSAFGFGFGFVFGFGLGRVGFYNNRVA 60

Query: 61  --RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREV------SV 120
             R     F  +S    P     F S + S SP +IP +S+ F  RED+RE+      SV
Sbjct: 61  QLRCCPCPFKPLSAHRMP-----FSSFVSSKSPPDIPTLSNCFSQREDERELFSEGLTSV 120

Query: 121 AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVL 180
           AGGIVALGKFDALH+GHRELAIQAS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVL
Sbjct: 121 AGGIVALGKFDALHIGHRELAIQASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVL 180

Query: 181 SSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAA 240
           SSWAPYC N AP+E+QI+FSSVR+LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA 
Sbjct: 181 SSWAPYCGNMAPTEFQIEFSSVRHLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDAT 240

Query: 241 ELVKLCEEYGLGAYIIKSVMDTNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSEL 300
           ELV+LCEEYG+GAYII SVMD N     +NS++  +RGQVSSTRVR AL++GDMKYVS+L
Sbjct: 241 ELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQL 300

Query: 301 LGRRHRLILMAKGLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFI-CTSDDDLIPCR 360
           LGR+HRLILMAK  EG       +++S PKSCLLNL PKEGLY KC++    DD+L+ C 
Sbjct: 301 LGRQHRLILMAKEQEGF--RCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIGEDDELLSCN 360

[Close]

BLAST of Cp4.1LG01g10210 vs. NCBI nr
Match: gi|645228608|ref|XP_008221077.1| (PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume])

HSP 1 Score: 413.3 bits (1061), Expect = 4.4e-112
Identity = 215/311 (69.13%), Postives = 252/311 (81.03%), Query Frame = 1


Query: 62  FCSIIPSTSPGEIPVISDSFGSREDDRE------VSVAGGIVALGKFDALHVGHRELAIQ 121
           F S + S SP +IP +S+ F  RED+RE       SVAGGIVALGKFDALH+GHRELAIQ
Sbjct: 79  FSSFVSSKSPPDIPTLSNCFSQREDEREHFSEGLTSVAGGIVALGKFDALHIGHRELAIQ 138

Query: 122 ASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVR 181
           AS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVLSSWAPYC N AP+E+QI+FSSVR
Sbjct: 139 ASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVLSSWAPYCGNMAPTEFQIEFSSVR 198

Query: 182 YLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDTN 241
           +LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA ELV+LCEEYG+GAYII SVMD N
Sbjct: 199 HLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDATELVRLCEEYGIGAYIINSVMDKN 258

Query: 242 QKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNSNSN 301
                +NS++  +RGQVSSTRVR AL++GDMKYVS+LLGRRHRLILMAK  EG       
Sbjct: 259 DYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQLLGRRHRLILMAKEQEGF--RCGK 318

Query: 302 SRVSAPKSCLLNLAPKEGLYNKCFI-CTSDDDLIPCRVVIDSTHVHIEMDDIGTR-HPVG 361
           +++S PKSCLLNL PKEGLY KC++    DD+L+ C VVID+ +VHIEMD++G   + VG
Sbjct: 319 NKLSVPKSCLLNLGPKEGLYEKCYVFIGEDDELVSCSVVIDTEYVHIEMDEVGASCNVVG 378

[Close]

BLAST of Cp4.1LG01g10210 vs. NCBI nr
Match: gi|702430838|ref|XP_010068804.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 412.5 bits (1059), Expect = 7.5e-112
Identity = 220/380 (57.89%), Postives = 275/380 (72.37%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQ-----FGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQ 60
           MLA+G R SHHLRECD        G GL  GL    +V    +  + P ++      R +
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  PRG----VSFFCSIIPSTSPGE-IPVISDSFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R      S  CS +PS S G  +P++SD F  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLG 240
            E+QI+FS+VRYL+P +FVEKLSKELGVRGVVAGE+YRFGYKAAGDA EL +LC+E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDTNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAK 300
           AYIIKSVMD NQ+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++  K
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGLSNSNSNSRVSAPKSCLLNLAPKEGLYNKCFICTSDDDLIPCRVVIDSTHVHIEMD 360
           G EG  +   +  +SAPKSCLLNLAPK+G Y+ CF+    ++L+PC VVIDST +H+ MD
Sbjct: 301 GQEGFGSQKHS--ISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMD 360

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g10210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIBF2_ARATH	6.8e-97	51.88	FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1	[more]
RIBF_ORYSJ	3.4e-88	60.58	FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1	[more]
RIBF1_ARATH	2.2e-87	53.01	FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1	[more]
RIBF_BUCAI	2.9e-07	26.80	Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon...	[more]

BLAST of Cp4.1LG01g10210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPQ8_CUCSA	9.7e-175	85.95	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1	[more]
M5XY96_PRUPE	2.3e-112	59.39	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1	[more]
A0A059BG42_EUCGR	5.2e-112	57.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1	[more]
I1LF92_SOYBN	2.6e-111	60.49	Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1	[more]
A0A0B2RY67_GLYSO	5.8e-111	60.49	Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g10210 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08340.1	3.8e-98	51.88	Nucleotidylyl transferase superfamily protein	[more]
AT5G23330.1	1.2e-88	53.01	Nucleotidylyl transferase superfamily protein	[more]

BLAST of Cp4.1LG01g10210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090205\|ref\|XP_008445891.1\|	3.3e-176	86.94	PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo]	[more]
gi\|449458746\|ref\|XP_004147108.1\|	1.4e-174	85.95	PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus]	[more]
gi\|596166958\|ref\|XP_007223021.1\|	3.4e-112	59.39	hypothetical protein PRUPE_ppa006865mg [Prunus persica]	[more]
gi\|645228608\|ref\|XP_008221077.1\|	4.4e-112	69.13	PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume]	[more]
gi\|702430838\|ref\|XP_010068804.1\|	7.5e-112	57.89	PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009231	riboflavin biosynthetic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003919	FMN adenylyltransferase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015864	FAD_synthase
IPR014729	Rossmann-like_a/b/a_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003919	FMN adenylyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016772	transferase activity, transferring phosphorus-containing groups
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g10210.1	Cp4.1LG01g10210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 93..273 score: 3.3
IPR015864	FAD synthetase	PFAM	PF06574	FAD_syn	coord: 174..242 score: 9.6
None	No IPR available	PANTHER	PTHR12714	PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE	coord: 7..360 score: 3.4E
None	No IPR available	PANTHER	PTHR12714:SF4	FAD SYNTHETASE RIBF1	coord: 7..360 score: 3.4E
None	No IPR available	unknown	SSF52374	Nucleotidylyl transferase	coord: 96..274 score: 6.82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g10210	Cucsa.280900	Cucumber (Gy14) v1	cgycpeB0736
Cp4.1LG01g10210	CmaCh18G008120	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g10210	CmoCh18G008140	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g10210	CmoCh04G013340	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g10210	Cla020047	Watermelon (97103) v1	cpewmB451
Cp4.1LG01g10210	Csa5G577970	Cucumber (Chinese Long) v2	cpecuB418
Cp4.1LG01g10210	MELO3C011756	Melon (DHL92) v3.5.1	cpemeB376
Cp4.1LG01g10210	ClCG02G014150	Watermelon (Charleston Gray)	cpewcgB376
Cp4.1LG01g10210	CSPI05G20250	Wild cucumber (PI 183967)	cpecpiB417
Cp4.1LG01g10210	Lsi04G007880	Bottle gourd (USVL1VR-Ls)	cpelsiB358
Cp4.1LG01g10210	MELO3C011756.2	Melon (DHL92) v3.6.1	cpemedB436
Cp4.1LG01g10210	CsaV3_5G029010	Cucumber (Chinese Long) v3	cpecucB0520
Cp4.1LG01g10210	Bhi07G000912	Wax gourd	cpewgoB0570
Cp4.1LG01g10210	CsGy5G019780	Cucumber (Gy14) v2	cgybcpeB628
Cp4.1LG01g10210	Carg02048	Silver-seed gourd	carcpeB1177
Cp4.1LG01g10210	Carg14454	Silver-seed gourd	carcpeB1021

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g10210	Cucurbita pepo (Zucchini)	cpecpeB041
Cp4.1LG01g10210	Cucurbita pepo (Zucchini)	cpecpeB380
Cp4.1LG01g10210	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g10210	Cucurbita maxima (Rimu)	cmacpeB736
Cp4.1LG01g10210	Cucurbita moschata (Rifu)	cmocpeB690
Cp4.1LG01g10210	Bottle gourd (USVL1VR-Ls)	cpelsiB317
Cp4.1LG01g10210	Melon (DHL92) v3.5.1	cpemeB357
Cp4.1LG01g10210	Melon (DHL92) v3.6.1	cpemedB416
Cp4.1LG01g10210	Silver-seed gourd	carcpeB0671
Cp4.1LG01g10210	Wax gourd	cpewgoB0556