CmaCh18G008120 (gene) Cucurbita maxima (Rimu)

NameCmaCh18G008120
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionFAD synthetase 2, chloroplastic
LocationCma_Chr18 : 7103085 .. 7109573 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGGGAAAAAAATGAAAAACCGTATAAAAAAAGAGATAAATGCGTTATAATTACAACGTTGAGAAGGCAACAGACAAACTCTGTGCCTCTAATTCCTCCCCTACTTTCCGGTTGCCGCTCCCATTCCGTACAAACCCGCCGACAATGTTGGCCGCCGGCGCTCGCGTTTCCCACCACCTCCGGGAGTGCGACTGCCACTTCGGCTTCCGGTTAAACTCAGGCCTTACCTCCTCCTCCTCCGCCGTCGTCCTCTTTCCTCCGATATGGCCTCGCAAGCCCACCTCTTCCCCTTCAATTTCTCACCGCTCCCAAAGACGTGGGTGCTCTTTCTTTTGCTCCATTGTCCCCTCCACCGCCGCCGGCGAACCCCCCCCCCCATTCTTTCCGATTGTTTTGGGTAAGTTTCAATTTTGTTCTTCTTTGATTGTTGTCTGTGTTGCTTTCTAAAATTACCTGTTGTTTTTTTGTTTCCCAGTTATCGAGGAGGTGGTTGGGAAGTCTCTGTGACAGGTTTGTTTGCTCCTCGTTAATTTTAAGGAAGAATGTTAATTCGTATCTTTGTCTGAGTTTTTTCTACGTGTTTTATGTGAGGGAAGTTTTTTAGTCCTTTTGGGTTGTCTATATATGGTTGTGTTCTTGTAATGCTGGTTCAAAATTGTCTTAATCTATATAAAATACATGAATTTGGGTTTTATTTTGCGAGCCAAGTGTCACAATAGCACTATTCTTGGTAGCGGACTTTTGCGATTGTGTTGTACTCACTCCCAACATTGAGTTGAGTCAATCCAATTTGGATTTGTGTTGCCTACGGTCGGGCAACGTATGCTCAAGCCTTTGGCCCTGTTTTAAGAGGAAGGTTTTAGAAAACGAGGGTAGAGAGATGTTTGGAAGAGAGTTTGAAAGAAAGTTTGAGAGTCGTTATATGGCTATAAGAAAAGAAAGAAACACTATAGCTTAAATATCATATCACTCGTGTAGGAAGAATTGACAATTAGTTGCATCTCCTTACATTTTGAGGCGATTCAGGCAGACTTAGACATGATTTTGTTAAATGGGCAATGTTTGCTCAAGACTCTGTCCCTGTTTTGAGAGGAGGGTTTGAAAGTAAGGTTGAAAGAAAGTTTGGAAGTCGTTATATGGCTATAAGCAAAGAAAGAAACGCCATAGCTAAATATCATATAACTCGTGTAGGAATAATTGACAACTAGTTGCATCCCTTATAGTACATTTTGAGACGATTCAGGTCTGGCAGGCCTAGACATGATTTCGTCGAACAGGCAACGTATGCTCAAGCCTCTGACCTCGTTTTGAGAAGAAGGTTTTAGAAAAACTGGGTAGAGAGATTTTTGAAAAAGAGTTTGAAAGGAAGGTCGAAAGAAAGTTTGGAAGTCGTTATATGGCTATAAGCAAAGAAAGAAATATCACAACTTAAATATCATATAACTTGGGTAGGAAAAATTGACAACTAATCACACCCCTATAGTACATTTTGAGACGATTTAGGTCTGACAGACCTAGACTTGATTTACGGGCTAAGTATGTTCAAGTCTCTAGCCTCGTTTTGAGAGGAAGGTTTTAGAAAACGGGGGCAGGGAGATTTTTGAAAGAGAGTTTGAAAGGAAGGTTGAAAGAAAGTTTGGAAGTCGTTATATGGCTATAAGCAAAGGAAGAAACACCCCAGCTTAAATATCATATAACTTGGGTACGAAAAATTGACAACTAGTCGCACCCCCCTATAGTACATTTTGAGACGAATCAGGTCTGGTAGACCTAGATATGATTTCGCCAAACGGCTATACAAAATCTAAGTGGAAGGAGTTGACGACTGATCGCACCCCCCTTTAGTACATTTTGGGACGATTCAGGTCTAGTAAGCGTAAACGTGATTTGCCGAATAGTCATACAAACAAAACAACTGACTCAAAAGTATTACTTAAATGGAAATCATACCCCTTTTTCTTTTTCCAACGTGACGAAAGAAAGCATCGTTGAATTAATGACTTCACTTCGATCTCCTCGACTGAACAATATACATCACAAGTCTTGTGATAAGAAATCCAACCGCCAATACTGATAGAAAAAAATGCCCATTCCCCACTCAAAATGAGTCTTCGACAAGACGTGGACATTCTCCAACTCGAATTAGATCTTGAAAATGATCGACTCAAATAGATCATAAAAACCCACTTTACGAAGATCACTTCCTTCTCTTCGGGCACAGGGGACCATCCTTTTGTTGCAGCATGCTCTTGAGATTTACGGATTCATAGGGGAGCTCGTCAGTCCCGACAGATCAAAATCCACTAAAAAAATACATAGATAAGATCTCATGTCCGAGAAATGCTATTTTCTCGAAACAAACGAAAGAAAAACATCATTTTATCCAATTATTTTATAGTTTTGTTAGTATTTGATCATTTTTGTAATGATTTGTTATCATTCATAGGGGGAATGGTAGCATTAGGAAAATTTGATGCTCTCCATGTTGGTCATTGAGAGCTTGCAATTCAAGCATCAAAGCTTGGATCTCCATTTTTATTGTCATTTGTTGGAATAGCTGAAGTACTTGGCTGGGAACCTAGGTACGCACAATGCCTTTTCATTATGTAACTTATTGTTTGTTGGACAATTACGTCCGACCATGAATTTTATGCCGTTTTCGTTGTGTTATAAGTTTCCGACATGGTTCGTGGGTCGACATCATGAAACTACCCCACATTTTCCCCGTGGAAGGTTTGCTCATTTGTGTGAGATCCCACATCGGTTGGAGAGAGGAACAAAACATTCCTTATAAGGGTGTGGAAACGTCTCCGTAGTAGACGCGTTTTAAAATCGTGAGACTTACGGTGATACGTAATGGGTCAAAGCAGACAATATGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATTAGAACTAGACATCGACGGTGTGTTAGCGAGGATGGTGGGCCCCCATGAGAGTGGATTCCCACGTTGGTTGGAGAAGGGAACAAAGCATTCCTTATAAGGGTGTGGAAATCTCTCCCTAGTAGACACGTTTTAAAACTGTGAGACTGATGACGATATGTAACGTGGCAAAGCAGACAATATCTACTAACGGTGGGCTTGGACCGTTACAAATGGTATCAGAGCTAGACATCGGACGGTGTGTTAGCGAGGACGCTGGGCTCCCAAGGGGGTGGATTGTGAGGTCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTTATAAGGGTGTGAAAATCTCTCCCTAGTAGACGCGTTTTAAAACTGTGAGGCTGGCGGCGATACATAACGGGCTCCCAAGGGGGTGGATTGTGAGGTCCCACATCGGTTGGAGAGAGCAACAAAGCATTCCTTATAAAGGTGTGAAAATCTCTCCCTAGTAGACGCGTTTTAAATCCGTGAGGCGGGCGGAGATACATAACGGGCCAAAGCGAACAATATTTATTAGCGGTGGGCTTGGGCTATTGCAAATGGTATTAGAACTAGACACCAGGTGGTGTGCTAGTGAGGACACTGGGTTCTCAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTTTTTATAAGGGTGTGGAAACTTCTTCCTAGTAGACGCGTTTAAAAACAGTGAGGTTGACGGTCATACGTAATGGGCCAAAGCGAACAATATTTGCTAGTGGTGGACTTGGGCTATTACAAATGGTATCAGAGTTAGACATCGGGCGATGTGCTAGCAAGGGCTGGGCCCCCAAGGGGGGTGGATTGTGAGATCCTACATCGGTTGGAGAGGGGAACGGAGCATTCCTTATAAGGGCGTGGAAACCTCTCATTACTAAACATGTTTTAAAACCATGAGGCTGATGGCGATGTATAATGGGTTAAAACGGACAATATTTACTAGCGGTGGACTCGAGCTATTATATTTTAATTGTTTTTGTTACCTAGAAAATTTGTGCAAACTTCTTGGCCTCCATTAGCTTTTTACAATGAGTTTCCTAAGTCTTGTAAAAAGTGTAGTTGACTGGGAATTGTTTGACCGTCTTTCTCCATTGAAGAGGCAAAACATAATCAACCATTGGCTAGCGCTCATCTCTAGCTCTGTTTCCAGCCTTTCATTTCATATACCATTTCCGTATGCCATACCTCTTATTCCTTCTTGCTAAACGTCCAAGTCTCGTTCTGTTTCTCTATCTGATGCATCTATTCTTAACAATCACCAAGAATTGTATGCTCTGTTAGTTAACTCGAACAGGGCTCCCATAGTCGCTCAATGCGACAGGACTCGAGTTCTTTCCTCTTAGGCACCATTCTGCAGAAACATGGCTCCATCAGAATATCAGATTCAATTTTCAAGCATTCGTCATCTAACTCCACGAGAATTTGTCATGAAACTCTCGAACGAGCTCGGTGTTCATGGAGTTGTGGCAGGTAAATGATTCGACATATTGGTAAAATATCCTCTCTTGAACTTGGTGTAAAATGTAGCCTTTGGTGGCAGGTGAAAGTTATAGGTTTGGATATAAAGCGGCAAGCTACGCAGCCGAGTTAGTGAAACTGTGCAACGAGTACGGGGTAGGCACTTATATCATAAAATCCGTGATGGATAAGAACCAAGAACCTACGAATTCAACCAATTCAAAAGAGCGAGGACAAGTGTCGTCTACTCGGGTTCGCTACACCCTTTCGACAGGTGATGTGAAATACGTCTCCGAGCTTTTAGGCCATAGACATCGTCTAGTTTTGATGGCGAAAGACGTAGAGGGATTAAGTTATAGCAATAGTAGAGTGTCAGTTCCAAGATCATGTTCATTAAACTTAGCACCAAAAGAAGGTTTATATGATAAGTGCTTTTCTGTTCGTTTGATCAGAACTTGATTCCATGTCGGGTCGTTATTGACTCGAGTCATGTTCATATCGAGTTAGATGAGTTAGCTACGTGTCGTCCTGTAGGAACCGATGACTACATAAGTGTTGAGTTTGACAATGAAGGAGTATGATTATGTTCGATTCACCTCCGCTTACATGTTCCTATACGTACATCGGTGAGATCCATCTTTGTTTTTCCAAGAGAGGTGATTCAATTTCAGGGTGTTCTAGCAAATTATGTTCTAAGTAACTCTGAGACCGTCAGTAGATATTGTCCTTTTTGGGATTTCCCATTCGGTTTTCCCTTAAGGATTTTAAAACGTGTTTGCTAGGGAGAGATTTTCACACTCTTATAAAAAAATGTTTTGTTACTCTCTTCAATCGATATGAGATTTCACAATCCACCCCCCCCTTTGAGGCCCAGCGTCGTCACTGACACTCATTCCTCTCTCCAATCGATGTGGGATCTCACAATTCACTCTCCTTTGTGGCTTAACATTCTCGCTGGCACTCCACCCGGCATTCACCCCATTCGGTGTGCCAGCAAGAATGCTAGGTGACACGGTCATGCTTGAAAGGCGATTGTGACACCAGGGGTCCCGAACAGGGGTGGATTATGAGATCCCACATCGATTTGGGAGGGAAACGGTGTCAGTGAGGATGCTGAGCTCTGAAGGGGGATGAATTATGAGATCCCACATCCATTGGGGAAGAGAACAAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGGAGTCGCGTTTTAAAACCTTTAAGGGATTCCCATAAAAGAAAGCCCAAAGAGGACAAAATCTCCTAGCGGTGGACTTGCTTTGTTACAAATGGTATCAAAGTCAAACATTAGGCAGTGTGCGAGCGAGGACGCTGGGCCCTGAATGAGGGTAAATTGTGAGATTCCACATCTATTGGAGAGAGGAATAAGTGTCAACAAGGACGCTGGGCCCCGAAGGGGGTGAATTGTGAGATCCCACATCGATTAGAGAGGGGAACAAGTGCCAACGAGAACTCTGTACCATGAAACAGGGTGGATTCTGAGATCCCACATCCGTCAGGGAGGAGAACGAAACATTCTTTCTAAGGGTGTGGAAACCTCTCCTTGGCAATCGCGTTTTAAAACTTTGAGGGGAAACCCGAAAGGGAAAGCTCAAAGAGAACAATATCTATTAGCGGTGGGGTCGAGTTCTTACATTAAAGACATTCGAGACCTTTATTTCAATCCTTAGAAAGCCCCTTCGGGAGGAACTTAAAAGCTATCTTATAATTCAAAAACCCCATAAACCAGAACTCAAACCCATCAACAGTCACCACTTGAATGTACTTTTTTGATGGATTGTTTACATTTTCACTTTCGTTAACTCTCTTCATCTTCTTCATTGGGATCATAACCTATAAACATTGCAGGAAACATGTTAGAACCCACACAAAGAAACAGACAGAGAGGGTGACAGAAAGGCTACATACTTTGTAATTCATTCTGCTCTGTTCTTCATGTGGAGAAGAGAATATGATTGGTCTGTCACTGCAGAAGGCAACCACATGGGTGGACACAAAGAGGAGCCCTGCAATGGGGCCTGCTGTTGTTGACAAATAA

mRNA sequence

AAAAAGGGAAAAAAATGAAAAACCGTATAAAAAAAGAGATAAATGCGTTATAATTACAACGTTGAGAAGGCAACAGACAAACTCTGTGCCTCTAATTCCTCCCCTACTTTCCGGTTGCCGCTCCCATTCCGTACAAACCCGCCGACAATGTTGGCCGCCGGCGCTCGCGTTTCCCACCACCTCCGGGAGTGCGACTGCCACTTCGGCTTCCGGTTAAACTCAGGCCTTACCTCCTCCTCCTCCGCCGTCGTCCTCTTTCCTCCGATATGGCCTCGCAAGCCCACCTCTTCCCCTTCAATTTCTCACCGCTCCCAAAGACGTGGGTGCTCTTTCTTTTGCTCCATTGTCCCCTCCACCGCCGCCGGCGAACCCCCCCCCCCATTCTTTCCGATTGTTTTGGGGGGAATGGTAGCATTAGGAAAATTTGATGCTCTCCATGGCTCCCATAGTCGCTCAATGCGACAGGACTCGAGTTCTTTCCTCTTAGGCACCATTCTGCAGAAACATGGCTCCATCAGAATATCAGATTCAATTTTCAAGCATTCGTCATCTAACTCCACGAGAATTTGTCATGAAACTCTCGAACGAGCTCGGTGTTCATGGAGTTGTGGCAGGTTTGGATATAAAGCGGCAAGCTACGCAGCCGAGTTAGTGAAACTGTGCAACGAGTACGGGGTAGGCACTTATATCATAAAATCCGTGATGGATAAGAACCAAGAACCTACGAATTCAACCAATTCAAAAGAGCGAGGACAAGTGTCGTCTACTCGGGTTCGCTACACCCTTTCGACAGGTGATGTGAAATACGTCTCCGAGCTTTTAGGCCATAGACATCGTCTAGTTTTGATGGCGAAAGACGTAGAGGGATTAAGTTATAGCAATAGTAGAGTGTCAGTTCCAAGATCATGTTCATTAAACTTAGCACCAAAAGAAGGTTTATATGATAAGTGCTTTTCTAACTTGATTCCATGTCGGGTCGTTATTGACTCGAGTCATGTTCATATCGAGTTAGATGAGTTAGCTACGTGTCGTCCTGTAGGAACCGATGACTACATAAGTGTTGAGTTTGACAATGAAGGAAAGGCAACCACATGGGTGGACACAAAGAGGAGCCCTGCAATGGGGCCTGCTGTTGTTGACAAATAA

Coding sequence (CDS)

ATGCGTTATAATTACAACGTTGAGAAGGCAACAGACAAACTCTGTGCCTCTAATTCCTCCCCTACTTTCCGGTTGCCGCTCCCATTCCGTACAAACCCGCCGACAATGTTGGCCGCCGGCGCTCGCGTTTCCCACCACCTCCGGGAGTGCGACTGCCACTTCGGCTTCCGGTTAAACTCAGGCCTTACCTCCTCCTCCTCCGCCGTCGTCCTCTTTCCTCCGATATGGCCTCGCAAGCCCACCTCTTCCCCTTCAATTTCTCACCGCTCCCAAAGACGTGGGTGCTCTTTCTTTTGCTCCATTGTCCCCTCCACCGCCGCCGGCGAACCCCCCCCCCCATTCTTTCCGATTGTTTTGGGGGGAATGGTAGCATTAGGAAAATTTGATGCTCTCCATGGCTCCCATAGTCGCTCAATGCGACAGGACTCGAGTTCTTTCCTCTTAGGCACCATTCTGCAGAAACATGGCTCCATCAGAATATCAGATTCAATTTTCAAGCATTCGTCATCTAACTCCACGAGAATTTGTCATGAAACTCTCGAACGAGCTCGGTGTTCATGGAGTTGTGGCAGGTTTGGATATAAAGCGGCAAGCTACGCAGCCGAGTTAGTGAAACTGTGCAACGAGTACGGGGTAGGCACTTATATCATAAAATCCGTGATGGATAAGAACCAAGAACCTACGAATTCAACCAATTCAAAAGAGCGAGGACAAGTGTCGTCTACTCGGGTTCGCTACACCCTTTCGACAGGTGATGTGAAATACGTCTCCGAGCTTTTAGGCCATAGACATCGTCTAGTTTTGATGGCGAAAGACGTAGAGGGATTAAGTTATAGCAATAGTAGAGTGTCAGTTCCAAGATCATGTTCATTAAACTTAGCACCAAAAGAAGGTTTATATGATAAGTGCTTTTCTAACTTGATTCCATGTCGGGTCGTTATTGACTCGAGTCATGTTCATATCGAGTTAGATGAGTTAGCTACGTGTCGTCCTGTAGGAACCGATGACTACATAAGTGTTGAGTTTGACAATGAAGGAAAGGCAACCACATGGGTGGACACAAAGAGGAGCCCTGCAATGGGGCCTGCTGTTGTTGACAAATAA

Protein sequence

MRYNYNVEKATDKLCASNSSPTFRLPLPFRTNPPTMLAAGARVSHHLRECDCHFGFRLNSGLTSSSSAVVLFPPIWPRKPTSSPSISHRSQRRGCSFFCSIVPSTAAGEPPPPFFPIVLGGMVALGKFDALHGSHSRSMRQDSSSFLLGTILQKHGSIRISDSIFKHSSSNSTRICHETLERARCSWSCGRFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNSTNSKERGQVSSTRVRYTLSTGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCFSNLIPCRVVIDSSHVHIELDELATCRPVGTDDYISVEFDNEGKATTWVDTKRSPAMGPAVVDK
BLAST of CmaCh18G008120 vs. Swiss-Prot
Match: RIBF2_ARATH (FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.2e-30
Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPT--NSTNSKERGQVSSTRVRYTL 250
           RFGYKA+  A+ELV+LC E G+   II SVMD  Q     +S +SK+RGQVSSTRVR  L
Sbjct: 208 RFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSGDSKDRGQVSSTRVRQAL 267

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD++YVSELLG  HRL+L  +  +    S   +SVPRS  LNL P  G+Y  C     
Sbjct: 268 AAGDMRYVSELLGRAHRLILRVRTQD--MPSERMISVPRSSILNLPPGIGIYKACLLLVG 327

Query: 311 -SNLIPCRVVIDSSHVHIELDELATCRPVGTDDY--ISVEF 343
             + +PC VV+D+S++H+E +E+  C    + ++  +SVEF
Sbjct: 328 DESSVPCTVVVDTSNIHVETEEVRLCNLDWSQEFRLVSVEF 366

BLAST of CmaCh18G008120 vs. Swiss-Prot
Match: RIBF_ORYSJ (FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.7e-29
Identity = 71/161 (44.10%), Postives = 104/161 (64.60%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQE---PTNSTNSKERGQVSSTRVRYT 250
           RFGY+A+  AAELVKLC E+G+  +I++SVMD  +     T S NS ++GQVSS+RVR+ 
Sbjct: 232 RFGYRASGDAAELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHA 291

Query: 251 LSTGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKC---- 310
           L+ GD++YVSELLG +HRLVL  K  E       R+ +P+SC LN+ P +GLY+ C    
Sbjct: 292 LAMGDMEYVSELLGRKHRLVLTVK--ENHLQERKRIMLPKSCMLNMPPADGLYENCDLLN 351

Query: 311 FSNLIPCRVVIDSSHVHIELDELATCRP--VGTDDYISVEF 343
             +L  CRV+I+S  + IE+ +  +  P  +  +  + +EF
Sbjct: 352 GGHLGLCRVIINSETIVIEMKDENSLLPNTIQENQQLGIEF 390

BLAST of CmaCh18G008120 vs. Swiss-Prot
Match: RIBF1_ARATH (FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.8e-28
Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNS----TNSKERGQVSSTRVRY 250
           RFGY+A+  A+ELV+LC ++G+  YII SVMDKNQ   N+    + SKERGQVSSTRVR+
Sbjct: 192 RFGYRASGDASELVRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRH 251

Query: 251 TLSTGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF-- 310
            L+ GDV+YV+ELLG  HR++   +  + L+    R+S+  S  LNL P  G+Y  C   
Sbjct: 252 ALAAGDVRYVTELLGRPHRVISRTR-TQDLTSKRGRISLQTSSLLNLPPGNGVYKACSLI 311

Query: 311 ---SNLIPCRVVIDSSHVHIELDE 326
               + I C+V++D+S+++IE +E
Sbjct: 312 VGDKHPISCKVIVDTSNLYIETEE 334

BLAST of CmaCh18G008120 vs. TrEMBL
Match: A0A0A0KPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 112/160 (70.00%), Postives = 129/160 (80.62%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNSTNSKERGQVSSTRVRYTLST 250
           RFGYKAA  AAELVKLC EYG+  YIIKSVMD+NQ+  NS NSKERGQVSSTRVR+ LS 
Sbjct: 202 RFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVNSANSKERGQVSSTRVRHALSK 261

Query: 251 GDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF-----S 310
           GD+KYVSELLG RHRL+LMA+ +EG S SN+RVS PRSC LNLAPKEGLY+ CF      
Sbjct: 262 GDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRSCLLNLAPKEGLYNNCFVCTTDE 321

Query: 311 NLIPCRVVIDSSHVHIELDELATCRPVGTDDYISVEFDNE 346
           NLIPCRV IDS+HVHIE+D++ T   VGT D ++VEF +E
Sbjct: 322 NLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEFGDE 361

BLAST of CmaCh18G008120 vs. TrEMBL
Match: M5XY96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.4e-42
Identity = 94/163 (57.67%), Postives = 119/163 (73.01%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTN--STNSKERGQVSSTRVRYTL 250
           RFGYKAA  A ELV+LC EYG+G YII SVMDKN    N  S++ K+RGQVSSTRVR  L
Sbjct: 225 RFGYKAAGDATELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRAL 284

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD+KYVS+LLG +HRL+LMAK+ EG     +++SVP+SC LNL PKEGLY+KC+    
Sbjct: 285 AVGDMKYVSQLLGRQHRLILMAKEQEGFRCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIG 344

Query: 311 --SNLIPCRVVIDSSHVHIELDEL-ATCRPVGTDD--YISVEF 343
               L+ C VVID+ +VHIE+DE+ A+C  VGT D   + +EF
Sbjct: 345 EDDELLSCNVVIDTEYVHIEMDEVGASCNVVGTQDLSLLRIEF 387

BLAST of CmaCh18G008120 vs. TrEMBL
Match: W9RX51_9ROSA (Riboflavin biosynthesis protein ribF OS=Morus notabilis GN=L484_023106 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.8e-42
Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTN--STNSKERGQVSSTRVRYTL 250
           RFGYKAA  A ELV+LC EYG+G YII SVMD+N+   +  S+NSK+RGQVSSTRVR  L
Sbjct: 208 RFGYKAAGDATELVRLCKEYGIGAYIINSVMDRNKLSMDIYSSNSKDRGQVSSTRVRRAL 267

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD+KYVSELLG  HRL+L AK+ E  ++ N ++S P+SC LNLAPKEGLY+KC+    
Sbjct: 268 AVGDMKYVSELLGRCHRLILKAKNEEVFTWDNHKLSAPKSCLLNLAPKEGLYEKCYIFVG 327

Query: 311 SNLIPCRVVIDSSHVHIELDELATCRPVGTDD--YISVEF 343
             LI CRVVID+ ++HIELD+++     GT D   + +EF
Sbjct: 328 EELIQCRVVIDTGYIHIELDDVSASSNFGTQDLKLLRIEF 367

BLAST of CmaCh18G008120 vs. TrEMBL
Match: K4BP55_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.8e-42
Identity = 115/271 (42.44%), Postives = 147/271 (54.24%), Query Frame = 1

Query: 109 EPPPPFFPIVLGGMVALGKFDALHGSHSRSMRQDSS---SFLL--------------GTI 168
           EPP    PI+ GG+VALGKFDALH  H     Q +     FLL                I
Sbjct: 84  EPPSERLPILTGGIVALGKFDALHIGHRELAIQAAKRGIPFLLSFVGMAEVLGWEPRAPI 143

Query: 169 LQKHGSIRISDSIFKHSSSNSTRICHETLERARCSWSCG--------------------R 228
           + +    RI  S   +  S   R       + R    C                     R
Sbjct: 144 VAECDRKRILSSWAPYCGSIMPRELQIDFSKVRYLTPCQFVEKLSKELGVRGVVAGENYR 203

Query: 229 FGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQ--EPTNSTNSKERGQVSSTRVRYTLS 288
           FGY+AA  A++LVKLC EYG+  YII SVMD NQ     NS + KERGQVSSTRVRY L 
Sbjct: 204 FGYRAAGDASDLVKLCEEYGLEAYIINSVMDTNQISGDLNSKDGKERGQVSSTRVRYALH 263

Query: 289 TGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF----S 337
            GD+KYVSELLG  HRL+LM +D E  +   +R+S P+SC LNLAPKEGLY+ C      
Sbjct: 264 KGDMKYVSELLGRNHRLILMMEDQERFTSERNRLSAPKSCLLNLAPKEGLYENCSVLIDK 323

BLAST of CmaCh18G008120 vs. TrEMBL
Match: A0A0V0HXR6_SOLCH (Putative FAD synthetase 1, chloroplastic-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.7e-41
Identity = 114/271 (42.07%), Postives = 145/271 (53.51%), Query Frame = 1

Query: 109 EPPPPFFPIVLGGMVALGKFDALHGSHSRSMRQDSS---SFLL--------------GTI 168
           EPP    PI+ GG+VALGKFDALH  H     Q +     FLL                I
Sbjct: 89  EPPSERLPILTGGIVALGKFDALHIGHRELAIQAAKRGIPFLLSFVGMAEVLGWEPRAPI 148

Query: 169 LQKHGSIRISDSIFKHSSSNSTRICHETLERARCSWSCG--------------------R 228
           + +    RI  S   +  +   R       + R    C                     R
Sbjct: 149 VAECDRKRILSSWAPYCGNVMPRELQIDFSKVRYLTPCQFVEKLSKELGVRGVVAGENYR 208

Query: 229 FGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQ--EPTNSTNSKERGQVSSTRVRYTLS 288
           FGY+AA  A++LVKLC EYG+  YII SVMD NQ     NS + KERGQVSSTRVRY L 
Sbjct: 209 FGYRAAGDASDLVKLCEEYGLEAYIINSVMDTNQISGALNSNDGKERGQVSSTRVRYALH 268

Query: 289 TGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF----S 337
            GD+KYVSELLG  HRL+LM +D E  +   +R+S P+SC LNLAPKEGLY+ C      
Sbjct: 269 KGDMKYVSELLGRNHRLILMMEDQERFTSERNRLSAPKSCLLNLAPKEGLYENCSVLIDK 328

BLAST of CmaCh18G008120 vs. TAIR10
Match: AT5G08340.1 (AT5G08340.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-31
Identity = 75/161 (46.58%), Postives = 103/161 (63.98%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPT--NSTNSKERGQVSSTRVRYTL 250
           RFGYKA+  A+ELV+LC E G+   II SVMD  Q     +S +SK+RGQVSSTRVR  L
Sbjct: 208 RFGYKASGDASELVRLCEECGITACIINSVMDMKQGSAKRDSGDSKDRGQVSSTRVRQAL 267

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD++YVSELLG  HRL+L  +  +    S   +SVPRS  LNL P  G+Y  C     
Sbjct: 268 AAGDMRYVSELLGRAHRLILRVRTQD--MPSERMISVPRSSILNLPPGIGIYKACLLLVG 327

Query: 311 -SNLIPCRVVIDSSHVHIELDELATCRPVGTDDY--ISVEF 343
             + +PC VV+D+S++H+E +E+  C    + ++  +SVEF
Sbjct: 328 DESSVPCTVVVDTSNIHVETEEVRLCNLDWSQEFRLVSVEF 366

BLAST of CmaCh18G008120 vs. TAIR10
Match: AT5G23330.1 (AT5G23330.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 67/144 (46.53%), Postives = 97/144 (67.36%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNS----TNSKERGQVSSTRVRY 250
           RFGY+A+  A+ELV+LC ++G+  YII SVMDKNQ   N+    + SKERGQVSSTRVR+
Sbjct: 192 RFGYRASGDASELVRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRH 251

Query: 251 TLSTGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF-- 310
            L+ GDV+YV+ELLG  HR++   +  + L+    R+S+  S  LNL P  G+Y  C   
Sbjct: 252 ALAAGDVRYVTELLGRPHRVISRTR-TQDLTSKRGRISLQTSSLLNLPPGNGVYKACSLI 311

Query: 311 ---SNLIPCRVVIDSSHVHIELDE 326
               + I C+V++D+S+++IE +E
Sbjct: 312 VGDKHPISCKVIVDTSNLYIETEE 334

BLAST of CmaCh18G008120 vs. NCBI nr
Match: gi|449458746|ref|XP_004147108.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 112/160 (70.00%), Postives = 129/160 (80.62%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNSTNSKERGQVSSTRVRYTLST 250
           RFGYKAA  AAELVKLC EYG+  YIIKSVMD+NQ+  NS NSKERGQVSSTRVR+ LS 
Sbjct: 202 RFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVNSANSKERGQVSSTRVRHALSK 261

Query: 251 GDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF-----S 310
           GD+KYVSELLG RHRL+LMA+ +EG S SN+RVS PRSC LNLAPKEGLY+ CF      
Sbjct: 262 GDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRSCLLNLAPKEGLYNNCFVCTTDE 321

Query: 311 NLIPCRVVIDSSHVHIELDELATCRPVGTDDYISVEFDNE 346
           NLIPCRV IDS+HVHIE+D++ T   VGT D ++VEF +E
Sbjct: 322 NLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEFGDE 361

BLAST of CmaCh18G008120 vs. NCBI nr
Match: gi|659090205|ref|XP_008445891.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 109/157 (69.43%), Postives = 126/157 (80.25%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTNSTNSKERGQVSSTRVRYTLST 250
           RFGYKAA  AAELVKLC EYG+  YIIKSVMD+NQ+  NS NSKERGQVSSTRVR+ LS 
Sbjct: 202 RFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVNSANSKERGQVSSTRVRHALSI 261

Query: 251 GDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF-----S 310
           GD+KYVSELLG RHRL+LMAK +EG S +NSRVS PRSC LNL+PKEG Y+ CF      
Sbjct: 262 GDMKYVSELLGRRHRLILMAKGLEGFSNTNSRVSAPRSCLLNLSPKEGFYNNCFLCTTDE 321

Query: 311 NLIPCRVVIDSSHVHIELDELATCRPVGTDDYISVEF 343
           NLIPCRV IDS+HVHIE+D++ T   VGT D +++EF
Sbjct: 322 NLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDCVNIEF 358

BLAST of CmaCh18G008120 vs. NCBI nr
Match: gi|645228608|ref|XP_008221077.1| (PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume])

HSP 1 Score: 182.6 bits (462), Expect = 1.3e-42
Identity = 95/163 (58.28%), Postives = 119/163 (73.01%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTN--STNSKERGQVSSTRVRYTL 250
           RFGYKAA  A ELV+LC EYG+G YII SVMDKN    N  S++ K+RGQVSSTRVR  L
Sbjct: 225 RFGYKAAGDATELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRAL 284

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD+KYVS+LLG RHRL+LMAK+ EG     +++SVP+SC LNL PKEGLY+KC+    
Sbjct: 285 AVGDMKYVSQLLGRRHRLILMAKEQEGFRCGKNKLSVPKSCLLNLGPKEGLYEKCYVFIG 344

Query: 311 --SNLIPCRVVIDSSHVHIELDEL-ATCRPVGTDD--YISVEF 343
               L+ C VVID+ +VHIE+DE+ A+C  VGT D   + +EF
Sbjct: 345 EDDELVSCSVVIDTEYVHIEMDEVGASCNVVGTQDLSLLRIEF 387

BLAST of CmaCh18G008120 vs. NCBI nr
Match: gi|970026033|ref|XP_015074321.1| (PREDICTED: FAD synthetase 1, chloroplastic-like [Solanum pennellii])

HSP 1 Score: 181.0 bits (458), Expect = 3.7e-42
Identity = 116/271 (42.80%), Postives = 147/271 (54.24%), Query Frame = 1

Query: 109 EPPPPFFPIVLGGMVALGKFDALHGSHSRSMRQDSS---SFLL--------------GTI 168
           EPP    PI+ GG+VALGKFDALH  H     Q +     FLL                I
Sbjct: 89  EPPSERLPILTGGIVALGKFDALHIGHRELAIQAAKRGIPFLLSFVGMAEVLGWEPRAPI 148

Query: 169 LQKHGSIRISDSIFKHSSSNSTRICHETLERARCSWSCG--------------------R 228
           + +    RI  S   +  S   R       + R    C                     R
Sbjct: 149 VAECDRKRILSSWAPYCGSIMPRELQIDFSKVRYLTPCQFVEKLSKELGVRGVVAGENYR 208

Query: 229 FGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQ--EPTNSTNSKERGQVSSTRVRYTLS 288
           FGY+AA  A++LVKLC EYG+  YII SVMD NQ     NS + KERGQVSSTRVRY L 
Sbjct: 209 FGYRAAGDASDLVKLCEEYGLEAYIINSVMDTNQISGDLNSKDGKERGQVSSTRVRYALH 268

Query: 289 TGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF----S 337
            GD+KYVSELLG  HRL+LM +D E  +   +R+S P+SC LNLAPKEGLY+ C      
Sbjct: 269 KGDMKYVSELLGRNHRLILMMEDQERFTSERNRLSAPKSCLLNLAPKEGLYENCSVLIDK 328

BLAST of CmaCh18G008120 vs. NCBI nr
Match: gi|596166958|ref|XP_007223021.1| (hypothetical protein PRUPE_ppa006865mg [Prunus persica])

HSP 1 Score: 180.6 bits (457), Expect = 4.8e-42
Identity = 94/163 (57.67%), Postives = 119/163 (73.01%), Query Frame = 1

Query: 191 RFGYKAASYAAELVKLCNEYGVGTYIIKSVMDKNQEPTN--STNSKERGQVSSTRVRYTL 250
           RFGYKAA  A ELV+LC EYG+G YII SVMDKN    N  S++ K+RGQVSSTRVR  L
Sbjct: 225 RFGYKAAGDATELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRAL 284

Query: 251 STGDVKYVSELLGHRHRLVLMAKDVEGLSYSNSRVSVPRSCSLNLAPKEGLYDKCF---- 310
           + GD+KYVS+LLG +HRL+LMAK+ EG     +++SVP+SC LNL PKEGLY+KC+    
Sbjct: 285 AVGDMKYVSQLLGRQHRLILMAKEQEGFRCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIG 344

Query: 311 --SNLIPCRVVIDSSHVHIELDEL-ATCRPVGTDD--YISVEF 343
               L+ C VVID+ +VHIE+DE+ A+C  VGT D   + +EF
Sbjct: 345 EDDELLSCNVVIDTEYVHIEMDEVGASCNVVGTQDLSLLRIEF 387

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RIBF2_ARATH4.2e-3046.58FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1[more]
RIBF_ORYSJ4.7e-2944.10FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1[more]
RIBF1_ARATH1.8e-2846.53FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KPQ8_CUCSA1.2e-5570.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1[more]
M5XY96_PRUPE3.4e-4257.67Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1[more]
W9RX51_9ROSA9.8e-4257.50Riboflavin biosynthesis protein ribF OS=Morus notabilis GN=L484_023106 PE=4 SV=1[more]
K4BP55_SOLLC9.8e-4242.44Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A0V0HXR6_SOLCH3.7e-4142.07Putative FAD synthetase 1, chloroplastic-like OS=Solanum chacoense PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G08340.12.4e-3146.58 Nucleotidylyl transferase superfamily protein[more]
AT5G23330.11.0e-2946.53 Nucleotidylyl transferase superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449458746|ref|XP_004147108.1|1.7e-5570.00PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus][more]
gi|659090205|ref|XP_008445891.1|1.9e-5469.43PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo][more]
gi|645228608|ref|XP_008221077.1|1.3e-4258.28PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume][more]
gi|970026033|ref|XP_015074321.1|3.7e-4242.80PREDICTED: FAD synthetase 1, chloroplastic-like [Solanum pennellii][more]
gi|596166958|ref|XP_007223021.1|4.8e-4257.67hypothetical protein PRUPE_ppa006865mg [Prunus persica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044237 cellular metabolic process
biological_process GO:0032259 methylation
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016772 transferase activity, transferring phosphorus-containing groups
molecular_function GO:0003919 FMN adenylyltransferase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh18G008120.1CmaCh18G008120.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 191..262
score: 6.4
NoneNo IPR availablePANTHERPTHR12714PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 191..342
score: 6.3
NoneNo IPR availablePANTHERPTHR12714:SF4FAD SYNTHETASE RIBF1coord: 191..342
score: 6.3