CmoCh04G013340 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G013340
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Riboflavin biosynthesis protein, putative, expressed
Location	Cmo_Chr04 : 6806784 .. 6811240 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAAGTCTGCGCCTCTCATTACTCCCCACTTGCCGCCTCCACTCGGTCCCAAGCGGCTGGCGATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACTTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGGTACTTTCCCATTTCATGTCCTTCGATTTCTTATCGCTGTCCGTGTTGTTTTCTTGCTAACTACAAATTTACCAATTGGCGTTTTGTTTCCCAGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCTGGTTTGTTTTCCTTCGTTGGTTCAATTTTCTCCTGAATCTGTCGTTAATTTTATGGAAGAATGCTAATCCTTATCTTCGTCTTAATTTTTCCGCTTATTTAATGTGTAGGAAGTTTGTGGTGATTTTGGGTTAGATTGAAGTTGAACAACCTTTTGATTATATGGTTGTGTACTTATAATGTGGGTTCTAAGTAGCTCTGATTTATACGCAATACATTAGAATGGGGGGTTTTTTTCCTCTTAAAGATTCAAGCCCCCAAAAGGGAGTGGGAGCAAAACGTAACTCCCGAAGAAAGAACAAGGCTTCAAATGTTAGAAGAGTTTAAAAATAAAAACATTAATGAACTAAGCGCCTAAGATCTTGACACCATCGATGATCCTAAGATTTAGGCTGTTGATGCGTCTTTGTTCTACTTAATGGTCAAACAGTTGATGTGCTTAGAAAATAATTGATCGGTTAACATAGCAAGTAGGAATGGAATATAATACACTTATGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGATGCGTTTTAAAGCCTTGAGGGGAAGCTCGAAAGGGAAAATCCAAAGAGAACAATATATGCTAGCAGTGGATTTGGATCGTTACACTTACGAAGTCACCAACTTGAGAGCAAGTAGCGAAAGCTTAAATATTGATTATTTTAATAAAAAGAAACCAAGATTTCAATGAAAAAAAATGAAAGGATCCAAAAGAGGCTACAAAATGGACAACCGAACAAAAGGAGCCAAAAGCAAGCTAACCTAAAGTTGGTCAGATGGGTGTCTAGTAGCTTTGATTGATAGTTTTAGGAATGTAAGTCATGTTAGGAATCACGACCCTCCACAATGGTATGATATTGTTCACTTTGAGCATAAGCTGTCATGGCTTTGTTTTGGGTTTTCTCAAAAGGTCTCATACCGATGGAGATGTATTCCTTACTCATAAACCCATGATCATTCCCTAAATTAGTCAAGGTGGGACTCCCTCCTAATAATCCCCAACAAGTCACAGTATTAGATGGATTCTTGTCTTCTATCTCTAGTTACTTCGGTTTGGGTATTATGTGAGAAGGTTTTTTTCCCCTTCTTTTGGATTAGCTTGCTATAAGAAAGTTCATTCAGTTGTGAAAAGATCATTTTCTCCTATTATTTGTAGTTCGGTTAGTCTGAGACTGGTTTTTATGATCATTTTTTTTTTTGTCACTCATAGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGTAAGCAAAATGCGTTTTCTTTATGTTACTTATTGTTTGTTTCGTCATAAATGGTTGGAAATTTACATCTGACAATGACCTTACAAAATAAAATTTTATGCAGTTTTGATTGTTTTCTAAGGTTCTTACTTGTTCCATTGGCAAATATATGCAACTACCCGATATTTCCCTGTGGAAGATTTGCCCATTCTAATTGAATTTGGTTCCAACAACATTTGTAACATTAGTAATTCACATTGAGTTTCCAATGGAAGTCTTGCAAGTTATAAAGGTGTAGTTATTATCATAGAACACTAAGTTGATGGCCAGCAAGAATTAGCGTGTGCAGCAACAGCAGAAAGAAAGCAAAGCACTCAACATTATGGTTGGCTGTCAACGATCTGCAGCAAAGAATGGAGGAAAGATTTGAGGTCACTGATCGAGATATTCAATGTAGTTTAACAGCAATTGATCAATTTGTTGTTGAAGGATACAAGTTCCCAAAAGGAAACAAAAATTGAAAGAACTAAAGAAAACAGGAGAGTATAACAAGAAGAACATATAGCTAAAAACAAGCAAGAACAGTATCTTCAAAATGACAAACTAAAGCTCTTTCAATTGGAATGTCTGGCTGTCACCATGTGAGAATCAGGACGAGATTTTGAATACCATCTGTTATATTAACTGAGGATTTGTAATGAAGGTGTTGAGTTTATTCAATTGCAGATCTCTAATCTCTTTCCTTTGTTCTGAACATGTACTTAGAATTATATTCTTGGAGTTAATTATTTATCTGTTAGTTAATTGAACAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTAAATTAAATTAAGACGTGTAGTACAAGTCTTTGTTGATAAAATACTCTCTTGGACTTGAGTAAAGTGTGATCGTTTCGAGGCTTTGATCGACAATGGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCTGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACAGAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAGGTGTCATCTACTCGGGTTCGCTATGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCACCAAAAGAAGGTCTCTATAATACGTGTTTCGTCTGTACAAGTGACGAGGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGATGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGATCATGTTCAATTCGCCTCCTGGAATTCCTTGATGAGATCACTTATCCACAAACTAAAATGTCGGATCCCAGAGATTCTGGATTATATGCATCAGAGAGATTCATATCTATTCTTACAAAGAGGTATGGAGCTTGTTTCAGCAATTATGTTCTAAATATTTGCAGACACGAAACACGGGTCACGGGCCAATGTGGGTAATGCTTCATCATTTACAGCTGGTTCTGTGAAGAAACACTACTTATTTTGGCAGGAAAAGCTCAATAGTTCCTTTCAGCTGTCCGACAGATGCATATGACCCGAAGGTACTTTTATATGTATTAACTAAAGCACGTTGTTTGCAAGGAATTATTATATTTATGTCTCTATGTTCATTTATCTGGAAACAAATAACTCAGAGGCATCGTTTTCTGTTGGCACTGTACATGATATCTATAATTTATTTAGGGACAAATAGCTTGGAAGTTTTCTTTTTTTCAACAGATCAAAAGCTGTTGAACCCATTTTGAGTTCTAACATAAAATTTAGACCCTTTTCACTTGCTTCTTGAAATGTAAGACAGGTAGTACTGTAGCCATGTTTTCCCTTGTTGTCTTTGGTTCCCTTTTGCAAGAACATGATTTTGCTTTTGAACTTTTTACGGGCCAAAACGAACAATATCTGCTAGCGGTGAGTTTGAACTGTTACTAATGGTATTAGAGCCAGACACCGAGCAGTGTGCCAGCGGGGACGCTGGGCTCCAAGGAGGGTGGATTGTGAGATCCCACATTGATTGGAGAGAGAAACGAAACATTCCTTATAAAGGTGTGGGAATCTCTCCCTAGTAGAAGCTTCGTCCCTTTTCCTTTTGCTTGCATTCTACTTCCATGGAAATGATTTTTCTTTGGAGTGGGATGTGGAAGCAGTTGCAAAAAAAGAAAAATGTTTTTATTTTTTAAGTCGGGATATATATATATATATATGTTTTAATCAATTGGGTTATATCATTTTATTTTAGAAAATTCAATTATTAAAATTCTCTAATAATTGGTAGTTGAGGTTTTAAGAAACATGAACATGGCAGTTGGG

mRNA sequence

TGAAAGTCTGCGCCTCTCATTACTCCCCACTTGCCGCCTCCACTCGGTCCCAAGCGGCTGGCGATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACTTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCTGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCTGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACAGAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAGGTGTCATCTACTCGGGTTCGCTATGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCACCAAAAGAAGGTCTCTATAATACGTGTTTCGTCTGTACAAGTGACGAGGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGATGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGATCATGTTCAATTCGCCTCCTGGAATTCCTTGATGAGATCACTTATCCACAAACTAAAATGTCGGATCCCAGAGATTCTGGATTATATGCATCAGAGAGATTCATATCTATTCTTACAAAGAGGTATGGAGCTTGTTTCAGCAATTATGTTCTAAATATTTGCAGACACGAAACACGGGTCACGGGCCAATGTGGGTAATGCTTCATCATTTACAGCTGGTTCTGTGAAGAAACACTACTTATTTTGGCAGGAAAAGCTCAATAGTTCCTTTCAGCTGTCCGACAGATGCATATGACCCGAAGGTACTTTTATATGTATTAACTAAAGCACGTTGTTTGCAAGGAATTATTATATTTATGTCTCTATGTTCATTTATCTGGAAACAAATAACTCAGAGGCATCGTTTTCTGTTGGCACTGTACATGATATCTATAATTTATTTAGGGACAAATAGCTTGGAAGTTTTCTTTTTTTCAACAGATCAAAAGCTGTTGAACCCATTTTGAGTTCTAACATAAAATTTAGACCCTTTTCACTTGCTTCTTGAAATGTAAGACAGGTAGTACTGTAGCCATGTTTTCCCTTGTTGTCTTTGGTTCCCTTTTGCAAGAACATGATTTTGCTTTTGAACTTTTTACGGGCCAAAACGAACAATATCTGCTAGCGGTGAGTTTGAACTGTTACTAATGGTATTAGAGCCAGACACCGAGCAGTGTGCCAGCGGGGACGCTGGGCTCCAAGGAGGGTGGATTGTGAGATCCCACATTGATTGGAGAGAGAAACGAAACATTCCTTATAAAGGTGTGGGAATCTCTCCCTAGTAGAAGCTTCGTCCCTTTTCCTTTTGCTTGCATTCTACTTCCATGGAAATGATTTTTCTTTGGAGTGGGATGTGGAAGCAGTTGCAAAAAAAGAAAAATGTTTTTATTTTTTAAGTCGGGATATATATATATATATATGTTTTAATCAATTGGGTTATATCATTTTATTTTAGAAAATTCAATTATTAAAATTCTCTAATAATTGGTAGTTGAGGTTTTAAGAAACATGAACATGGCAGTTGGG

Coding sequence (CDS)

ATGTTGGCTGCCGGCGCTCGCGTTTCTCACCATCTCCGGGAGTGCGACTCTCAATTTGGCTTCGGATTAACCTCAGGCCTTACCTCCTTCCCCGTCGTTCTATTTCCTCCGATATGGTCTCGCAAGCCCACTTCTAATTTCCCTTCAATTTCTCGCCGCTCCCAACCACGTGGGGTTTCTTTCTTTTGCTCCATTATCCCCTCCACTTCCCCCGGAGAAATCCCCGTTATCTCCGATTCTTTTGGTTCACGAGAGGATGATCGTGAAGTCTCTGTGGCTGGAGGAATAGTAGCATTAGGAAAATTTGATGCTCTTCACGTTGGACATCGAGAGCTCGCAATTCAAGCTTCAACGGTTGGATCTCCATTTCTATTGTCATTCGTTGGAATTGCTGAAGTACTCGGTTGGGAACCTAGGGCTCCCATAGTGGCTCAATGTGATAGGAAGCGAGTACTTTCCTCATGGGCACCATACTGCCGAAACTCAGCTCCATCCGAATATCAGATTCAATTTTCAAGCGTTCGTTATCTAACTCCACGAGAATTTGTTGAGAAATTATCAAAGGAGCTTGGCGTTCGTGGAGTTGTTGCAGGTGAAAGCTATAGGTTTGGATATAAAGCAGCAGGTGATGCAGCTGAGCTAGTGAAACTGTGTGAGGAATATGGGTTAGGTGCTTATATTATAAAATCTGTGATGGACAGAAACCAAAAAGTTGTTAATTCTACCAATTCAATGGAGAGAGGACAGGTGTCATCTACTCGGGTTCGCTATGCCCTTTCCATAGGAGATATGAAGTATGTCTCTGAGCTTTTAGGCCGCAGACATCGCCTTATTTTGATGGCAAAAGGCCTAGAGGGATTAAGCAATAGCAGAGTGTCTGCCCCAAAATCATGTTTGTTAAATTTAGCACCAAAAGAAGGTCTCTATAATACGTGTTTCGTCTGTACAAGTGACGAGGATCTAATCCCATGTCGGGTAGTTATCGACTCGACTCATGTTCACATAGAAATGGATGATATAGGCACACGTCATCCCGTAGGAACACAAAACTACTTAAGTGTTGAATTTGACCATGAAGGAGCATGA

Homology

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BLAST of CmoCh04G013340 vs. Swiss-Prot
Match: RIBF2_ARATH (FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.2e-99
Identity = 194/368 (52.72%), Postives = 256/368 (69.57%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPS--ISRRSQPRG 60
           ML  G+RV  HL + +     GL  G     +V     + R   +   S   SR+ + R 
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRM 60

Query: 61  VSFFCSIIPSTSPGEIPVISDSFGSREDDREVSV------AGGIVALGKFDALHVGHREL 120
           +S F S   ++  GE+P++ + F  REDD E+ V      +GGIVALGKFDALH+GHREL
Sbjct: 61  ISSFGSHCRTS--GEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
            IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F+
Sbjct: 121 TIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFA 180

Query: 181 SVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVM 240
           SVR+LTPR+FVEKLSKEL V GVVAGE+YRFGYKA+GDA+ELV+LCEE G+ A II SVM
Sbjct: 181 SVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVM 240

Query: 241 DRNQKVV--NSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS 300
           D  Q     +S +S +RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +  +  S  
Sbjct: 241 DMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPSER 300

Query: 301 RVSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN 357
            +S P+S +LNL P  G+Y  C +   DE  +PC VV+D++++H+E +++   +   +Q 
Sbjct: 301 MISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEVRLCNLDWSQE 360

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BLAST of CmoCh04G013340 vs. Swiss-Prot
Match: RIBF_ORYSJ (FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.5e-88
Identity = 165/270 (61.11%), Postives = 206/270 (76.30%), Query Frame = 1


Query: 92  VAGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRV 151
           V  GIVALGKFDALH+GHRELA+ AS  G+PFLLSFVGIAEVLGWE R PIVAQCDRKRV
Sbjct: 122 VIDGIVALGKFDALHIGHRELAMYASKAGTPFLLSFVGIAEVLGWEYRPPIVAQCDRKRV 181

Query: 152 LSSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDA 211
           L+SWAPYC+N  P EYQ++FS VRYLTPR+FVE+LS++L ++GVVAGE+YRFGY+A+GDA
Sbjct: 182 LTSWAPYCKNVVPIEYQVEFSKVRYLTPRQFVERLSRDLKIQGVVAGENYRFGYRASGDA 241

Query: 212 AELVKLCEEYGLGAYIIKSVMDRNQK---VVNSTNSMERGQVSSTRVRYALSIGDMKYVS 271
           AELVKLCEE+GL A+I++SVMD  +    V  S NS ++GQVSS+RVR+AL++GDM+YVS
Sbjct: 242 AELVKLCEEFGLSAFIVRSVMDTARSYNGVTTSVNSSDKGQVSSSRVRHALAMGDMEYVS 301

Query: 272 ELLGRRHRLILMAKGLEGLSNSRVSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVI 331
           ELLGR+HRL+L  K        R+  PKSC+LN+ P +GLY  C +      L  CRV+I
Sbjct: 302 ELLGRKHRLVLTVKENHLQERKRIMLPKSCMLNMPPADGLYENCDLLNGGH-LGLCRVII 361

Query: 332 DSTHVHIEMDDIGTRHP--VGTQNYLSVEF 357
           +S  + IEM D  +  P  +     L +EF
Sbjct: 362 NSETIVIEMKDENSLLPNTIQENQQLGIEF 390

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BLAST of CmoCh04G013340 vs. Swiss-Prot
Match: RIBF1_ARATH (FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.0e-88
Identity = 177/329 (53.80%), Postives = 236/329 (71.73%), Query Frame = 1


Query: 41  RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREVS------VAG 100
           RK +      S  SQ R  S F S     +P +IP   D F   +D  E+S      VAG
Sbjct: 27  RKSSFMLRPCSAISQQRIKSSFRS--HCKTPRKIPAPLDCFSQGDDHPELSAEGLSPVAG 86

Query: 101 GIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSS 160
           GIVALGKFDALH+GHRELAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSS
Sbjct: 87  GIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSS 146

Query: 161 WAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAEL 220
           WA YC N AP E++I+F+SVR+L P++FVEKLS+EL V GVVAGE+YRFGY+A+GDA+EL
Sbjct: 147 WASYCGNIAPVEFEIEFASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASEL 206

Query: 221 VKLCEEYGLGAYIIKSVMDRNQKVVNS----TNSMERGQVSSTRVRYALSIGDMKYVSEL 280
           V+LC+++G+ AYII SVMD+NQ  VN+    + S ERGQVSSTRVR+AL+ GD++YV+EL
Sbjct: 207 VRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTEL 266

Query: 281 LGRRHRLILMAKGLEGLS-NSRVSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVID 340
           LGR HR+I   +  +  S   R+S   S LLNL P  G+Y  C +   D+  I C+V++D
Sbjct: 267 LGRPHRVISRTRTQDLTSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKVIVD 326

Query: 341 STHVHIEMDDIGTRHPVGTQNY--LSVEF 357
           +++++IE ++    +   +Q +  L +EF
Sbjct: 327 TSNLYIETEEERFHNSDESQEFQLLGIEF 353

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BLAST of CmoCh04G013340 vs. Swiss-Prot
Match: RIBF_BUCAI (Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=ribF PE=3 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.9e-07
Identity = 52/194 (26.80%), Postives = 95/194 (48.97%), Query Frame = 1


Query: 93  AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPR---------APIV 152
           +  +V +G FD +H+GH++L      +G  + LS +    V+ +EP+         AP+ 
Sbjct: 15  SNSVVTIGNFDGIHLGHQKLFSHIYQIGQKYKLSTI----VVLFEPQPLEFLRKNNAPVR 74

Query: 153 AQCDRKRV--LSSWAPYCRNSAPSEYQIQFS-SVRYLTPREF-VEKLSKELGVRGVVAGE 212
               R+++  +SS+      +  S   ++F+ S + L+ ++F +  L  +L ++ +V G 
Sbjct: 75  ITKFREKIRRISSY------NFDSILCVKFNKSFQSLSAKDFIINILINKLHLKFIVIGN 134

Query: 213 SYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQKVVNSTNSMERGQVSSTRVRYAL 272
            +RFG++  G+   L KL  +Y      I+ +   N K            +SST +R AL
Sbjct: 135 DFRFGFQRNGNINLLKKLGYKYQFNVIKIRPLYKNNIK------------ISSTNIRKAL 186

Query: 273 SIGDMKYVSELLGR 274
           S  ++K  S LLGR
Sbjct: 195 SENNIKLASLLLGR 186

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BLAST of CmoCh04G013340 vs. TrEMBL
Match: A0A0A0KPQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 1.9e-175
Identity = 314/361 (86.98%), Postives = 330/361 (91.41%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAAG RVSHHLR+ DS F FGLTSGL S   +LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMDRNQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS--RVSAPKSC 300
           S NS ERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILMA+GLEG SNS  RVSAP+SC
Sbjct: 241 SANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRSC 300

Query: 301 LLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEFDH 360
           LLNLAPKEGLYN CFVCT+DE+LIPCRV IDSTHVHIEMDDIGT H VGTQ+ ++VEF  
Sbjct: 301 LLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEFGD 360

[Close]

BLAST of CmoCh04G013340 vs. TrEMBL
Match: A0A059BG42_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.1e-113
Identity = 222/378 (58.73%), Postives = 276/378 (73.02%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQ-----FGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQ 60
           MLA+G R SHHLRECD        G GL  GL    +V    +  + P ++      R +
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  PRG----VSFFCSIIPSTSPGE-IPVISDSFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R      S  CS +PS S G  +P++SD F  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLG 240
            E+QI+FS+VRYL+P +FVEKLSKELGVRGVVAGE+YRFGYKAAGDA EL +LC+E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDRNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAK 300
           AYIIKSVMD+NQ+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++  K
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGLSNSR--VSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDI 357
           G EG  + +  +SAPKSCLLNLAPK+G Y+ CFV    E+L+PC VVIDST +H+ MD  
Sbjct: 301 GQEGFGSQKHSISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMDKT 360

[Close]

BLAST of CmoCh04G013340 vs. TrEMBL
Match: M5XY96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.8e-112
Identity = 233/392 (59.44%), Postives = 282/392 (71.94%), Query Frame = 1


Query: 1   MLAAG---ARVSHHLR--ECDSQ---------------FGFGLTSGLTSFPVVLFPPIWS 60
           ML+ G   +R+S+HLR  +CD +               FGFG   G     V  +    +
Sbjct: 1   MLSGGGGCSRLSNHLRLRDCDVRLHHQHLGSGSGSAFGFGFGFVFGFGLGRVGFYNNRVA 60

Query: 61  --RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREV------SV 120
             R     F  +S    P     F S + S SP +IP +S+ F  RED+RE+      SV
Sbjct: 61  QLRCCPCPFKPLSAHRMP-----FSSFVSSKSPPDIPTLSNCFSQREDERELFSEGLTSV 120

Query: 121 AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVL 180
           AGGIVALGKFDALH+GHRELAIQAS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVL
Sbjct: 121 AGGIVALGKFDALHIGHRELAIQASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVL 180

Query: 181 SSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAA 240
           SSWAPYC N AP+E+QI+FSSVR+LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA 
Sbjct: 181 SSWAPYCGNMAPTEFQIEFSSVRHLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDAT 240

Query: 241 ELVKLCEEYGLGAYIIKSVMDRNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSEL 300
           ELV+LCEEYG+GAYII SVMD+N     +NS++  +RGQVSSTRVR AL++GDMKYVS+L
Sbjct: 241 ELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQL 300

Query: 301 LGRRHRLILMAKGLEGL--SNSRVSAPKSCLLNLAPKEGLYNTCFV-CTSDEDLIPCRVV 357
           LGR+HRLILMAK  EG     +++S PKSCLLNL PKEGLY  C+V    D++L+ C VV
Sbjct: 301 LGRQHRLILMAKEQEGFRCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIGEDDELLSCNVV 360

[Close]

BLAST of CmoCh04G013340 vs. TrEMBL
Match: I1LF92_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 8.8e-112
Identity = 222/365 (60.82%), Postives = 267/365 (73.15%), Query Frame = 1


Query: 6   ARVSHHLRECDSQFGFGLTSGLTSFPVV-LFPPIWSRKPTSNFPSISRRSQPRGVSFFCS 65
           +R+SHH R+CD  F F  T   ++F    L  P    KP   +  IS+ + P   ++ C 
Sbjct: 7   SRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKP--RWGGISQTTVPS--NYRCF 66

Query: 66  IIPSTSPGEIPVISDSFGSREDDREV------SVAGGIVALGKFDALHVGHRELAIQAST 125
             P  SPGEIP++ D F  +E+DRE+      +VAGGIVALGKFDALH+GHRELAIQAS 
Sbjct: 67  GTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHRELAIQASR 126

Query: 126 VGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLT 185
            G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P E++++FSSVR+L 
Sbjct: 127 AGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVEFSSVRHLN 186

Query: 186 PREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQ-- 245
           PR+FVEKLSKEL VRGVVAGE+YRFGYKAAGDA ELVKLCEEYG+ AYIIKSVMD+N+  
Sbjct: 187 PRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVMDKNRFS 246

Query: 246 -KVVNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS--RVS 305
             + + TNS ERGQVSSTRVR AL++GD+KYVSELLGR HRLILMA   E  S    +VS
Sbjct: 247 ADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMATDQERFSTGQYKVS 306

Query: 306 APKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN--Y 357
           AP+SCLLNLAPKEGLY  C +    E+++ C VVIDS  VHIE D  G      +QN  +
Sbjct: 307 APRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETDYGGLSDIFCSQNLKF 366

[Close]

BLAST of CmoCh04G013340 vs. TrEMBL
Match: A0A0B2RY67_GLYSO (Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.0e-111
Identity = 222/365 (60.82%), Postives = 266/365 (72.88%), Query Frame = 1


Query: 6   ARVSHHLRECDSQFGFGLTSGLTSFPVV-LFPPIWSRKPTSNFPSISRRSQPRGVSFFCS 65
           +R+SHH R+CD  F F  T   ++F    L  P    KP   +  IS+   P   ++ C 
Sbjct: 7   SRISHHFRDCDFHFHFHFTFTYSAFQTFHLSSPPLPLKP--RWGGISQTIVPS--NYRCF 66

Query: 66  IIPSTSPGEIPVISDSFGSREDDREV------SVAGGIVALGKFDALHVGHRELAIQAST 125
             P  SPGEIP++ D F  +E+DRE+      +VAGGIVALGKFDALH+GHRELAIQAS 
Sbjct: 67  GTPPKSPGEIPLLFDCFSQQEEDREILSDGTSAVAGGIVALGKFDALHIGHRELAIQASR 126

Query: 126 VGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLT 185
            G PFLLSFVG+A+VLGWEPRAPIVA+CDRKR+LSSW PYC N  P E++++FSSVR+L 
Sbjct: 127 AGPPFLLSFVGMAKVLGWEPRAPIVAKCDRKRILSSWVPYCCNMVPEEFEVEFSSVRHLN 186

Query: 186 PREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQ-- 245
           PR+FVEKLSKEL VRGVVAGE+YRFGYKAAGDA ELVKLCEEYG+ AYIIKSVMD+N+  
Sbjct: 187 PRQFVEKLSKELRVRGVVAGENYRFGYKAAGDALELVKLCEEYGMEAYIIKSVMDKNRFS 246

Query: 246 -KVVNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS--RVS 305
             + + TNS ERGQVSSTRVR AL++GD+KYVSELLGR HRLILMA   E  S    +VS
Sbjct: 247 ADMNSVTNSKERGQVSSTRVREALAVGDLKYVSELLGRPHRLILMATDQERFSTGQYKVS 306

Query: 306 APKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN--Y 357
           AP+SCLLNLAPKEGLY  C +    E+++ C VVIDS  VHIE D  G      +QN  +
Sbjct: 307 APRSCLLNLAPKEGLYEKCSLLLDQENVVQCSVVIDSKFVHIETDYGGLSDIFCSQNLKF 366

[Close]

BLAST of CmoCh04G013340 vs. TAIR10
Match: AT5G08340.1 (AT5G08340.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 362.1 bits (928), Expect = 4.1e-100
Identity = 194/368 (52.72%), Postives = 256/368 (69.57%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPS--ISRRSQPRG 60
           ML  G+RV  HL + +     GL  G     +V     + R   +   S   SR+ + R 
Sbjct: 1   MLCGGSRVLQHLSDHNHHNSIGLGLGFCGAKIVQLSSFFLRPSQAMAKSHHFSRKLRQRM 60

Query: 61  VSFFCSIIPSTSPGEIPVISDSFGSREDDREVSV------AGGIVALGKFDALHVGHREL 120
           +S F S   ++  GE+P++ + F  REDD E+ V      +GGIVALGKFDALH+GHREL
Sbjct: 61  ISSFGSHCRTS--GEVPILHNCFSQREDDPELPVEGLSPVSGGIVALGKFDALHIGHREL 120

Query: 121 AIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFS 180
            IQAS +G+P+LLSFVG+AEVLGWEPRAPIVA+CDR+RVL+SWA YC + AP EY+I+F+
Sbjct: 121 TIQASRIGAPYLLSFVGMAEVLGWEPRAPIVAKCDRQRVLTSWASYCGDRAPEEYEIEFA 180

Query: 181 SVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVM 240
           SVR+LTPR+FVEKLSKEL V GVVAGE+YRFGYKA+GDA+ELV+LCEE G+ A II SVM
Sbjct: 181 SVRHLTPRQFVEKLSKELRVCGVVAGENYRFGYKASGDASELVRLCEECGITACIINSVM 240

Query: 241 DRNQKVV--NSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS 300
           D  Q     +S +S +RGQVSSTRVR AL+ GDM+YVSELLGR HRLIL  +  +  S  
Sbjct: 241 DMKQGSAKRDSGDSKDRGQVSSTRVRQALAAGDMRYVSELLGRAHRLILRVRTQDMPSER 300

Query: 301 RVSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQN 357
            +S P+S +LNL P  G+Y  C +   DE  +PC VV+D++++H+E +++   +   +Q 
Sbjct: 301 MISVPRSSILNLPPGIGIYKACLLLVGDESSVPCTVVVDTSNIHVETEEVRLCNLDWSQE 360

[Close]

BLAST of CmoCh04G013340 vs. TAIR10
Match: AT5G23330.1 (AT5G23330.1 Nucleotidylyl transferase superfamily protein)

HSP 1 Score: 327.4 bits (838), Expect = 1.1e-89
Identity = 177/329 (53.80%), Postives = 236/329 (71.73%), Query Frame = 1


Query: 41  RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREVS------VAG 100
           RK +      S  SQ R  S F S     +P +IP   D F   +D  E+S      VAG
Sbjct: 27  RKSSFMLRPCSAISQQRIKSSFRS--HCKTPRKIPAPLDCFSQGDDHPELSAEGLSPVAG 86

Query: 101 GIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSS 160
           GIVALGKFDALH+GHRELAIQA+ +G+P+LLSFVG+AEVLGW+PRAPIVA+CDRKRVLSS
Sbjct: 87  GIVALGKFDALHIGHRELAIQAARIGTPYLLSFVGLAEVLGWKPRAPIVAKCDRKRVLSS 146

Query: 161 WAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAEL 220
           WA YC N AP E++I+F+SVR+L P++FVEKLS+EL V GVVAGE+YRFGY+A+GDA+EL
Sbjct: 147 WASYCGNIAPVEFEIEFASVRHLNPQQFVEKLSRELRVCGVVAGENYRFGYRASGDASEL 206

Query: 221 VKLCEEYGLGAYIIKSVMDRNQKVVNS----TNSMERGQVSSTRVRYALSIGDMKYVSEL 280
           V+LC+++G+ AYII SVMD+NQ  VN+    + S ERGQVSSTRVR+AL+ GD++YV+EL
Sbjct: 207 VRLCKDFGISAYIINSVMDKNQVSVNTEEEDSKSKERGQVSSTRVRHALAAGDVRYVTEL 266

Query: 281 LGRRHRLILMAKGLEGLS-NSRVSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVID 340
           LGR HR+I   +  +  S   R+S   S LLNL P  G+Y  C +   D+  I C+V++D
Sbjct: 267 LGRPHRVISRTRTQDLTSKRGRISLQTSSLLNLPPGNGVYKACSLIVGDKHPISCKVIVD 326

Query: 341 STHVHIEMDDIGTRHPVGTQNY--LSVEF 357
           +++++IE ++    +   +Q +  L +EF
Sbjct: 327 TSNLYIETEEERFHNSDESQEFQLLGIEF 353

[Close]

BLAST of CmoCh04G013340 vs. NCBI nr
Match: gi|659090205|ref|XP_008445891.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 627.9 bits (1618), Expect = 1.1e-176
Identity = 314/358 (87.71%), Postives = 330/358 (92.18%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAA  RVSHHLRE DS F FGLTSGLTS  ++LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAASVRVSHHLREFDSHFAFGLTSGLTSSAILLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYC+NSAPSEYQIQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCQNSAPSEYQIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMDRNQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLS--NSRVSAPKSC 300
           S NS ERGQVSSTRVR+ALSIGDMKYVSELLGRRHRLILMAKGLEG S  NSRVSAP+SC
Sbjct: 241 SANSKERGQVSSTRVRHALSIGDMKYVSELLGRRHRLILMAKGLEGFSNTNSRVSAPRSC 300

Query: 301 LLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEF 357
           LLNL+PKEG YN CF+CT+DE+LIPCRV IDSTHVHIEMDDIGT H VGTQ+ +++EF
Sbjct: 301 LLNLSPKEGFYNNCFLCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDCVNIEF 358

[Close]

BLAST of CmoCh04G013340 vs. NCBI nr
Match: gi|449458746|ref|XP_004147108.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 623.2 bits (1606), Expect = 2.8e-175
Identity = 314/361 (86.98%), Postives = 330/361 (91.41%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQFGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQPRGVS 60
           MLAAG RVSHHLR+ DS F FGLTSGL S   +LFPPIW R PTSNFPSIS RSQPR VS
Sbjct: 1   MLAAGVRVSHHLRDFDSHFAFGLTSGLASSAFLLFPPIWPRNPTSNFPSISHRSQPRRVS 60

Query: 61  FFCSIIPSTSPGEIPVISDSFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASTVG 120
           FFCSI+PSTS GEIPV+SD FGSREDDREVSVAGGIVALGKFDALHVGHRELAIQAS VG
Sbjct: 61  FFCSIVPSTSSGEIPVLSDCFGSREDDREVSVAGGIVALGKFDALHVGHRELAIQASMVG 120

Query: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVRYLTPR 180
           SPFLLSFVGIAEVLGWEPRAPIVAQCDR+RVLSSWAPYC+NSAPSEY+IQFSSVRYLTPR
Sbjct: 121 SPFLLSFVGIAEVLGWEPRAPIVAQCDRQRVLSSWAPYCQNSAPSEYRIQFSSVRYLTPR 180

Query: 181 EFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRNQKVVN 240
           EFVEKLSKEL V GVVAGESYRFGYKAAGDAAELVKLCEEYG+ AYIIKSVMDRNQKVVN
Sbjct: 181 EFVEKLSKELRVCGVVAGESYRFGYKAAGDAAELVKLCEEYGISAYIIKSVMDRNQKVVN 240

Query: 241 STNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGLSNS--RVSAPKSC 300
           S NS ERGQVSSTRVR+ALS GDMKYVSELLGRRHRLILMA+GLEG SNS  RVSAP+SC
Sbjct: 241 SANSKERGQVSSTRVRHALSKGDMKYVSELLGRRHRLILMAEGLEGFSNSNNRVSAPRSC 300

Query: 301 LLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDIGTRHPVGTQNYLSVEFDH 360
           LLNLAPKEGLYN CFVCT+DE+LIPCRV IDSTHVHIEMDDIGT H VGTQ+ ++VEF  
Sbjct: 301 LLNLAPKEGLYNNCFVCTTDENLIPCRVAIDSTHVHIEMDDIGTSHLVGTQDRVNVEFGD 360

[Close]

BLAST of CmoCh04G013340 vs. NCBI nr
Match: gi|702430838|ref|XP_010068804.1| (PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 417.2 bits (1071), Expect = 3.0e-113
Identity = 222/378 (58.73%), Postives = 276/378 (73.02%), Query Frame = 1


Query: 1   MLAAGARVSHHLRECDSQ-----FGFGLTSGLTSFPVVLFPPIWSRKPTSNFPSISRRSQ 60
           MLA+G R SHHLRECD        G GL  GL    +V    +  + P ++      R +
Sbjct: 1   MLASGCRASHHLRECDPLGLGLGLGLGLGLGLCGARIVQLSSLMRKPPAASADGGGGRRR 60

Query: 61  PRG----VSFFCSIIPSTSPGE-IPVISDSFGSREDDRE-VS-----VAGGIVALGKFDA 120
            R      S  CS +PS S G  +P++SD F  +E+ RE VS     VAGGIVALGKFDA
Sbjct: 61  SRNRSGSSSSSCSSVPSQSRGGGVPILSDCFSQQENAREPVSEGSSLVAGGIVALGKFDA 120

Query: 121 LHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAP 180
           LH+GHRELA+QAS VG+PFLLSFVG+AEVLGWEPR PIVA+ DR+RVLSSWA YC N  P
Sbjct: 121 LHIGHRELAVQASKVGTPFLLSFVGMAEVLGWEPRVPIVAKSDRQRVLSSWASYCGNVVP 180

Query: 181 SEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLG 240
            E+QI+FS+VRYL+P +FVEKLSKELGVRGVVAGE+YRFGYKAAGDA EL +LC+E G+G
Sbjct: 181 IEFQIEFSTVRYLSPEQFVEKLSKELGVRGVVAGENYRFGYKAAGDALELARLCQERGMG 240

Query: 241 AYIIKSVMDRNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAK 300
           AYIIKSVMD+NQ+   ++ ++  E+GQVSSTRVR+AL+ GD+ YVSELLGRRHRL++  K
Sbjct: 241 AYIIKSVMDKNQEFSHMDDSDLNEKGQVSSTRVRHALAAGDVNYVSELLGRRHRLVIETK 300

Query: 301 GLEGLSNSR--VSAPKSCLLNLAPKEGLYNTCFVCTSDEDLIPCRVVIDSTHVHIEMDDI 357
           G EG  + +  +SAPKSCLLNLAPK+G Y+ CFV    E+L+PC VVIDST +H+ MD  
Sbjct: 301 GQEGFGSQKHSISAPKSCLLNLAPKDGTYDNCFVVIGQENLVPCSVVIDSTAIHVRMDKT 360

[Close]

BLAST of CmoCh04G013340 vs. NCBI nr
Match: gi|596166958|ref|XP_007223021.1| (hypothetical protein PRUPE_ppa006865mg [Prunus persica])

HSP 1 Score: 414.1 bits (1063), Expect = 2.6e-112
Identity = 233/392 (59.44%), Postives = 282/392 (71.94%), Query Frame = 1


Query: 1   MLAAG---ARVSHHLR--ECDSQ---------------FGFGLTSGLTSFPVVLFPPIWS 60
           ML+ G   +R+S+HLR  +CD +               FGFG   G     V  +    +
Sbjct: 1   MLSGGGGCSRLSNHLRLRDCDVRLHHQHLGSGSGSAFGFGFGFVFGFGLGRVGFYNNRVA 60

Query: 61  --RKPTSNFPSISRRSQPRGVSFFCSIIPSTSPGEIPVISDSFGSREDDREV------SV 120
             R     F  +S    P     F S + S SP +IP +S+ F  RED+RE+      SV
Sbjct: 61  QLRCCPCPFKPLSAHRMP-----FSSFVSSKSPPDIPTLSNCFSQREDERELFSEGLTSV 120

Query: 121 AGGIVALGKFDALHVGHRELAIQASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVL 180
           AGGIVALGKFDALH+GHRELAIQAS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVL
Sbjct: 121 AGGIVALGKFDALHIGHRELAIQASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVL 180

Query: 181 SSWAPYCRNSAPSEYQIQFSSVRYLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAA 240
           SSWAPYC N AP+E+QI+FSSVR+LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA 
Sbjct: 181 SSWAPYCGNMAPTEFQIEFSSVRHLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDAT 240

Query: 241 ELVKLCEEYGLGAYIIKSVMDRNQKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSEL 300
           ELV+LCEEYG+GAYII SVMD+N     +NS++  +RGQVSSTRVR AL++GDMKYVS+L
Sbjct: 241 ELVRLCEEYGIGAYIINSVMDKNDYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQL 300

Query: 301 LGRRHRLILMAKGLEGL--SNSRVSAPKSCLLNLAPKEGLYNTCFV-CTSDEDLIPCRVV 357
           LGR+HRLILMAK  EG     +++S PKSCLLNL PKEGLY  C+V    D++L+ C VV
Sbjct: 301 LGRQHRLILMAKEQEGFRCCKNKLSVPKSCLLNLGPKEGLYEKCYVFIGEDDELLSCNVV 360

[Close]

BLAST of CmoCh04G013340 vs. NCBI nr
Match: gi|645228608|ref|XP_008221077.1| (PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume])

HSP 1 Score: 413.3 bits (1061), Expect = 4.3e-112
Identity = 214/309 (69.26%), Postives = 252/309 (81.55%), Query Frame = 1


Query: 62  FCSIIPSTSPGEIPVISDSFGSREDDRE------VSVAGGIVALGKFDALHVGHRELAIQ 121
           F S + S SP +IP +S+ F  RED+RE       SVAGGIVALGKFDALH+GHRELAIQ
Sbjct: 79  FSSFVSSKSPPDIPTLSNCFSQREDEREHFSEGLTSVAGGIVALGKFDALHIGHRELAIQ 138

Query: 122 ASTVGSPFLLSFVGIAEVLGWEPRAPIVAQCDRKRVLSSWAPYCRNSAPSEYQIQFSSVR 181
           AS VG PFLLSFVG+AEVLGWEPRAPIVA+CDRKRVLSSWAPYC N AP+E+QI+FSSVR
Sbjct: 139 ASKVGPPFLLSFVGMAEVLGWEPRAPIVARCDRKRVLSSWAPYCGNMAPTEFQIEFSSVR 198

Query: 182 YLTPREFVEKLSKELGVRGVVAGESYRFGYKAAGDAAELVKLCEEYGLGAYIIKSVMDRN 241
           +LTPR+FVEKL KELGVRGVVAGE+YRFGYKAAGDA ELV+LCEEYG+GAYII SVMD+N
Sbjct: 199 HLTPRQFVEKLLKELGVRGVVAGENYRFGYKAAGDATELVRLCEEYGIGAYIINSVMDKN 258

Query: 242 QKV--VNSTNSMERGQVSSTRVRYALSIGDMKYVSELLGRRHRLILMAKGLEGL--SNSR 301
                +NS++  +RGQVSSTRVR AL++GDMKYVS+LLGRRHRLILMAK  EG     ++
Sbjct: 259 DYSININSSDVKDRGQVSSTRVRRALAVGDMKYVSQLLGRRHRLILMAKEQEGFRCGKNK 318

Query: 302 VSAPKSCLLNLAPKEGLYNTCFV-CTSDEDLIPCRVVIDSTHVHIEMDDIGTR-HPVGTQ 357
           +S PKSCLLNL PKEGLY  C+V    D++L+ C VVID+ +VHIEMD++G   + VGTQ
Sbjct: 319 LSVPKSCLLNLGPKEGLYEKCYVFIGEDDELVSCSVVIDTEYVHIEMDEVGASCNVVGTQ 378

The following BLAST results are available for this feature:

BLAST of CmoCh04G013340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RIBF2_ARATH	7.2e-99	52.72	FAD synthetase 2, chloroplastic OS=Arabidopsis thaliana GN=RIBF2 PE=1 SV=1	[more]
RIBF_ORYSJ	1.5e-88	61.11	FAD synthetase, chloroplastic OS=Oryza sativa subsp. japonica GN=RIBF PE=3 SV=1	[more]
RIBF1_ARATH	2.0e-88	53.80	FAD synthetase 1, chloroplastic OS=Arabidopsis thaliana GN=RIBF1 PE=1 SV=1	[more]
RIBF_BUCAI	2.9e-07	26.80	Riboflavin biosynthesis protein RibF OS=Buchnera aphidicola subsp. Acyrthosiphon...	[more]

BLAST of CmoCh04G013340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPQ8_CUCSA	1.9e-175	86.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G577970 PE=4 SV=1	[more]
A0A059BG42_EUCGR	2.1e-113	58.73	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G02586 PE=4 SV=1	[more]
M5XY96_PRUPE	1.8e-112	59.44	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006865mg PE=4 SV=1	[more]
I1LF92_SOYBN	8.8e-112	60.82	Uncharacterized protein OS=Glycine max GN=GLYMA_10G286400 PE=4 SV=1	[more]
A0A0B2RY67_GLYSO	2.0e-111	60.82	Riboflavin biosynthesis protein ribF OS=Glycine soja GN=glysoja_013578 PE=4 SV=1	[more]

BLAST of CmoCh04G013340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08340.1	4.1e-100	52.72	Nucleotidylyl transferase superfamily protein	[more]
AT5G23330.1	1.1e-89	53.80	Nucleotidylyl transferase superfamily protein	[more]

BLAST of CmoCh04G013340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090205\|ref\|XP_008445891.1\|	1.1e-176	87.71	PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis melo]	[more]
gi\|449458746\|ref\|XP_004147108.1\|	2.8e-175	86.98	PREDICTED: FAD synthetase 2, chloroplastic-like [Cucumis sativus]	[more]
gi\|702430838\|ref\|XP_010068804.1\|	3.0e-113	58.73	PREDICTED: FAD synthetase 2, chloroplastic-like [Eucalyptus grandis]	[more]
gi\|596166958\|ref\|XP_007223021.1\|	2.6e-112	59.44	hypothetical protein PRUPE_ppa006865mg [Prunus persica]	[more]
gi\|645228608\|ref\|XP_008221077.1\|	4.3e-112	69.26	PREDICTED: FAD synthetase 2, chloroplastic [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR015864	FAD_synthase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003919	FMN adenylyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009231	riboflavin biosynthetic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0044237	cellular metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003919	FMN adenylyltransferase activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0016772	transferase activity, transferring phosphorus-containing groups
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G013340.1	CmoCh04G013340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 93..273 score: 3.1
IPR015864	FAD synthetase	PFAM	PF06574	FAD_syn	coord: 174..241 score: 1.
None	No IPR available	PANTHER	PTHR12714	PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE	coord: 7..356 score: 1.7E
None	No IPR available	PANTHER	PTHR12714:SF4	FAD SYNTHETASE RIBF1	coord: 7..356 score: 1.7E
None	No IPR available	unknown	SSF52374	Nucleotidylyl transferase	coord: 96..274 score: 7.51

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G013340	Cucsa.280900	Cucumber (Gy14) v1	cgycmoB0774
CmoCh04G013340	CmaCh18G008120	Cucurbita maxima (Rimu)	cmacmoB420
CmoCh04G013340	Cla020047	Watermelon (97103) v1	cmowmB719
CmoCh04G013340	Csa5G577970	Cucumber (Chinese Long) v2	cmocuB717
CmoCh04G013340	MELO3C011756	Melon (DHL92) v3.5.1	cmomeB644
CmoCh04G013340	ClCG02G014150	Watermelon (Charleston Gray)	cmowcgB643
CmoCh04G013340	CSPI05G20250	Wild cucumber (PI 183967)	cmocpiB725
CmoCh04G013340	Lsi04G007880	Bottle gourd (USVL1VR-Ls)	cmolsiB669
CmoCh04G013340	Cp4.1LG01g10210	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G013340	MELO3C011756.2	Melon (DHL92) v3.6.1	cmomedB734
CmoCh04G013340	CsaV3_5G029010	Cucumber (Chinese Long) v3	cmocucB0849
CmoCh04G013340	Cla97C02G039910	Watermelon (97103) v2	cmowmbB713
CmoCh04G013340	Bhi07G000912	Wax gourd	cmowgoB0905
CmoCh04G013340	CsGy5G019780	Cucumber (Gy14) v2	cgybcmoB628
CmoCh04G013340	Carg02048	Silver-seed gourd	carcmoB1138
CmoCh04G013340	Carg14454	Silver-seed gourd	carcmoB0987

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G013340	CmoCh18G008140	Cucurbita moschata (Rifu)	cmocmoB336

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G013340	Melon (DHL92) v3.6.1	cmomedB711
CmoCh04G013340	Wax gourd	cmowgoB0891
CmoCh04G013340	Cucurbita moschata (Rifu)	cmocmoB470
CmoCh04G013340	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G013340	Cucurbita maxima (Rimu)	cmacmoB744
CmoCh04G013340	Melon (DHL92) v3.5.1	cmomeB623
CmoCh04G013340	Cucurbita pepo (Zucchini)	cmocpeB651