Lsi03G004640 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA ATGGAACCTCAAGAAAACTTCAGCTTCCAACCCATCAATGGCGGCTCCACCCCCATTACTGAATCACCTCCTCTCTTTAGCCTGGCACCAAAATCAATTGACCACCATGAGAAAGAAGACCATGGCTATGGAAATGTCGATTGTTGTTTGGAAAAAAGAAGAAATGGAGCTCATAGAAAGAGCAATTCTTGCTCCGGGGATAGCAGAAGGACTAATGAGATAGCAATTGATAGCGATGGTGATGAAGATGAGAGGATGGATATGCTGTGGGAAGATTTCAATGAAGAATTGCTGCTGAAAAATTTGAGTTCCAGATTTGGGTCTGATAGGTTGCCGGAACTTGAAGACTTAGAGTCGGAGGAAGCAACGGAAGACGGTGGCAGCGGGGCATTGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTCCTGTTTCTGCATAGCTTTCGCAGGAAGCTCAAAGCTCGGACTTGGTGA MEPQENFSFQPINGGSTPITESPPLFSLAPKSIDHHEKEDHGYGNVDCCLEKRRNGAHRKSNSCSGDSRRTNEIAIDSDGDEDERMDMLWEDFNEELLLKNLSSRFGSDRLPELEDLESEEATEDGGSGALLSARMASVVVIMKVLKKLLFLHSFRRKLKARTW
BLAST of Lsi03G004640 vs. TrEMBL
Match: A0A0A0LQ09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402070 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 6.3e-65 Identity = 139/165 (84.24%), Postives = 146/165 (88.48%), Query Frame = 1
BLAST of Lsi03G004640 vs. TrEMBL
Match: M5VI77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022692mg PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 7.8e-07 Identity = 54/157 (34.39%), Postives = 79/157 (50.32%), Query Frame = 1
BLAST of Lsi03G004640 vs. TrEMBL
Match: A5AEK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026104 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-06 Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Lsi03G004640 vs. TrEMBL
Match: A0A067H876_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048330mg PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.3e-06 Identity = 46/150 (30.67%), Postives = 75/150 (50.00%), Query Frame = 1
BLAST of Lsi03G004640 vs. TrEMBL
Match: V4TDW4_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10003091mg PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.6e-06 Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 1
BLAST of Lsi03G004640 vs. TAIR10
Match: AT1G71910.1 (AT1G71910.1 unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.9e-06 Identity = 49/151 (32.45%), Postives = 78/151 (51.66%), Query Frame = 1
BLAST of Lsi03G004640 vs. NCBI nr
Match: gi|778674413|ref|XP_011650206.1| (PREDICTED: uncharacterized protein LOC105434762 [Cucumis sativus]) HSP 1 Score: 255.0 bits (650), Expect = 9.0e-65 Identity = 139/165 (84.24%), Postives = 146/165 (88.48%), Query Frame = 1
BLAST of Lsi03G004640 vs. NCBI nr
Match: gi|659082020|ref|XP_008441623.1| (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo]) HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63 Identity = 136/165 (82.42%), Postives = 143/165 (86.67%), Query Frame = 1
BLAST of Lsi03G004640 vs. NCBI nr
Match: gi|1012179553|ref|XP_015967802.1| (PREDICTED: uncharacterized protein LOC107491478 [Arachis duranensis]) HSP 1 Score: 65.1 bits (157), Expect = 1.3e-07 Identity = 52/168 (30.95%), Postives = 91/168 (54.17%), Query Frame = 1
BLAST of Lsi03G004640 vs. NCBI nr
Match: gi|731430627|ref|XP_010665112.1| (PREDICTED: uncharacterized protein LOC104882672 [Vitis vinifera]) HSP 1 Score: 64.7 bits (156), Expect = 1.7e-07 Identity = 52/166 (31.33%), Postives = 83/166 (50.00%), Query Frame = 1
BLAST of Lsi03G004640 vs. NCBI nr
Match: gi|645263609|ref|XP_008237314.1| (PREDICTED: uncharacterized protein LOC103336056 [Prunus mume]) HSP 1 Score: 62.4 bits (150), Expect = 8.6e-07 Identity = 54/156 (34.62%), Postives = 83/156 (53.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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