Csa2G402070 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATCCTTTTCCCAATCTCCTTTGTCAACTCTATGATTCATTGTCTCTTCTGTTTTATAAACAATCTCAAACCCCAACTTAATCAAATCCTTTTCAACCATTTTCCCATCTCTTCTTTCCCCCAGATTCTCAATTTGCTGATCAAATCAACCTCTAAAATCTAAATCCACACCCATGGAAGCTCAAGAAAACTTTAGCTTCCAACCCATTAATGGCGGCTCCACCCCCATCACTGAATCACCTCCTCTTGCATCAGAATCAATTGACCACCATGAGAAAGAAGATCAAAGCGATGGAAATGTTGATTGTTCTTCGGAAATAAGAAGTAATGGATGTCATAGAAAGAGCAATTCTTGCTCAGGCGATAGCAGAAGGACTAATGAGATAGCAATTAACAGCGATGACGAAGAAGATGAGAAGATGGATATGTTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCGTCGGTTGCCAGAACTTGATGACTTGGAATCAGAGGAAGCAATGGAAGATGGCAGCAGCAGCGGGGCGATGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTGTTTTTACATAATTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGATTGGGAATTAAGGATTCAAGAAGTTTGGTCTTTGCTGTGTGTTTTAAAATTTTGGGATGAAATAAAGATGAATTTGT ATGGAAGCTCAAGAAAACTTTAGCTTCCAACCCATTAATGGCGGCTCCACCCCCATCACTGAATCACCTCCTCTTGCATCAGAATCAATTGACCACCATGAGAAAGAAGATCAAAGCGATGGAAATGTTGATTGTTCTTCGGAAATAAGAAGTAATGGATGTCATAGAAAGAGCAATTCTTGCTCAGGCGATAGCAGAAGGACTAATGAGATAGCAATTAACAGCGATGACGAAGAAGATGAGAAGATGGATATGTTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCGTCGGTTGCCAGAACTTGATGACTTGGAATCAGAGGAAGCAATGGAAGATGGCAGCAGCAGCGGGGCGATGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTGTTTTTACATAATTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA ATGGAAGCTCAAGAAAACTTTAGCTTCCAACCCATTAATGGCGGCTCCACCCCCATCACTGAATCACCTCCTCTTGCATCAGAATCAATTGACCACCATGAGAAAGAAGATCAAAGCGATGGAAATGTTGATTGTTCTTCGGAAATAAGAAGTAATGGATGTCATAGAAAGAGCAATTCTTGCTCAGGCGATAGCAGAAGGACTAATGAGATAGCAATTAACAGCGATGACGAAGAAGATGAGAAGATGGATATGTTGTGGGAAGATTTCAATGAAGAATTGCTGAAGAATTTGAGTTCCAGATTTGGGTCTCGTCGGTTGCCAGAACTTGATGACTTGGAATCAGAGGAAGCAATGGAAGATGGCAGCAGCAGCGGGGCGATGCTGTCGGCAAGGATGGCGAGTGTGGTAGTGATAATGAAGGTGCTGAAGAAGCTTCTGTTTTTACATAATTTTCGCAGGAAGCTCAAAGCTCGGACATGGTGA MEAQENFSFQPINGGSTPITESPPLASESIDHHEKEDQSDGNVDCSSEIRSNGCHRKSNSCSGDSRRTNEIAINSDDEEDEKMDMLWEDFNEELLKNLSSRFGSRRLPELDDLESEEAMEDGSSSGAMLSARMASVVVIMKVLKKLLFLHNFRRKLKARTW*
BLAST of Csa2G402070 vs. TrEMBL
Match: A0A0A0LQ09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G402070 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 6.4e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Csa2G402070 vs. TrEMBL
Match: M5VI77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022692mg PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.2e-13 Identity = 60/172 (34.88%), Postives = 86/172 (50.00%), Query Frame = 1
BLAST of Csa2G402070 vs. TrEMBL
Match: A5AEK3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_026104 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 6.7e-11 Identity = 57/169 (33.73%), Postives = 85/169 (50.30%), Query Frame = 1
BLAST of Csa2G402070 vs. TrEMBL
Match: A0A061FJY8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036336 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 6.3e-09 Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 1
BLAST of Csa2G402070 vs. TrEMBL
Match: A0A0L9TCQ6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan518s000100 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.2e-07 Identity = 51/159 (32.08%), Postives = 74/159 (46.54%), Query Frame = 1
BLAST of Csa2G402070 vs. TAIR10
Match: AT1G71910.1 (AT1G71910.1 unknown protein) HSP 1 Score: 51.2 bits (121), Expect = 6.9e-07 Identity = 48/152 (31.58%), Postives = 68/152 (44.74%), Query Frame = 1
BLAST of Csa2G402070 vs. NCBI nr
Match: gi|778674413|ref|XP_011650206.1| (PREDICTED: uncharacterized protein LOC105434762 [Cucumis sativus]) HSP 1 Score: 324.7 bits (831), Expect = 9.1e-86 Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 1
BLAST of Csa2G402070 vs. NCBI nr
Match: gi|659082020|ref|XP_008441623.1| (PREDICTED: uncharacterized protein LOC103485703 [Cucumis melo]) HSP 1 Score: 309.3 bits (791), Expect = 4.0e-81 Identity = 153/161 (95.03%), Postives = 157/161 (97.52%), Query Frame = 1
BLAST of Csa2G402070 vs. NCBI nr
Match: gi|645263609|ref|XP_008237314.1| (PREDICTED: uncharacterized protein LOC103336056 [Prunus mume]) HSP 1 Score: 85.9 bits (211), Expect = 7.1e-14 Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 1
BLAST of Csa2G402070 vs. NCBI nr
Match: gi|595791037|ref|XP_007199267.1| (hypothetical protein PRUPE_ppa022692mg [Prunus persica]) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-13 Identity = 60/172 (34.88%), Postives = 86/172 (50.00%), Query Frame = 1
BLAST of Csa2G402070 vs. NCBI nr
Match: gi|731430627|ref|XP_010665112.1| (PREDICTED: uncharacterized protein LOC104882672 [Vitis vinifera]) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-11 Identity = 58/169 (34.32%), Postives = 86/169 (50.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|