Lsi02G024460 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G024460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Mitochondrial carrier family protein
Location	chr02 : 31030217 .. 31030678 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA

mRNA sequence

ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA

Coding sequence (CDS)

ATGGAAGGCGTTTCAGTGAGCGTTTACAATGGCCTGAAGCGCTATTTGAGGAAAAAAAGCTACCGGAAACTGGCTGGGTCGGTGGGCCGTAGGACGGACACAGTGCAACTTGGGGCCACTGGAGGGAGGCGGCGGCGGCGGATTTGGCGGATCAAGATCTCGCCTAAGCTCAGGCTGTTCCGGCGCCTGCCGTCACTGAAGAAACTGCTTCTATGGCTGAGAGATTCGTATGTTAAGGCGATGTTGGCATTTGCCAACTCGAGGGTCATCGGCTCCGGCACTACCGGCGGCGGCGGCGATGGGATCTGGGGCAGCGCCGGAAGAAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTACAAGTCGTTGGTGGTGGCGCAGGGACGGTTGCCGCCGCCGGAATCTGTCCGGCCGAGTTGGGTTGGCGGCCGGTTGCCGACGGTGGCGGAATAA

Protein sequence

MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMITEIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE

Homology

[Close]

BLAST of Lsi02G024460 vs. TrEMBL
Match: A0A0A0K7Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405950 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.2e-71
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGG-RRRRRIWRIKISPKLRL 60
           MEGVSVSVYNGL+RYLR+KSYRKLA SVGRRTDT QLGA GG RRRRRIWRIKISPKLRL
Sbjct: 1   MEGVSVSVYNGLRRYLRRKSYRKLAASVGRRTDTAQLGAAGGGRRRRRIWRIKISPKLRL 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMI 120
           FRR+PSLKKLLLWLRDSYVKAMLAFANSRVIGSG+  GGGDGIWG AGRSTLKEYDEKMI
Sbjct: 61  FRRMPSLKKLLLWLRDSYVKAMLAFANSRVIGSGSGSGGGDGIWGGAGRSTLKEYDEKMI 120

Query: 121 TEIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE 154
           TEIYKSLVVAQGRLPPPE+VRPSW GGRLPTVAE
Sbjct: 121 TEIYKSLVVAQGRLPPPETVRPSWGGGRLPTVAE 154

[Close]

BLAST of Lsi02G024460 vs. TrEMBL
Match: A0A067K7J9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13986 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-31
Identity = 79/153 (51.63%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLF 60
           MEGVS ++Y  ++RY R++ Y +L  S  RR +TV+LG+T  +++RR+WRIKI PKL++F
Sbjct: 1   MEGVSTAMYTKVRRYWRRRGYERLNESTRRRQNTVELGSTL-QKKRRVWRIKIKPKLKIF 60

Query: 61  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMIT 120
           + + S +K  +WLRD+YVK M+ FANSRVIG+G  GG GDG+  + G+  +KEYDE+MI 
Sbjct: 61  K-MSSPRKFFVWLRDAYVKMMMGFANSRVIGAGYGGGAGDGL-ATFGKRPVKEYDERMII 120

Query: 121 EIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE 154
           EIYKSL++AQG+L   E+ R   V  RLP + E
Sbjct: 121 EIYKSLMMAQGQLVAREAPRFGSV-PRLPAIVE 149

[Close]

BLAST of Lsi02G024460 vs. TrEMBL
Match: V4U6A3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022679mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-31
Identity = 82/143 (57.34%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKL-AGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRL 60
           MEGVS +VY GL+ Y R+K Y KL     GRRT   +LG+T  RRRR  WRIKI PKL++
Sbjct: 1   MEGVSTTVYKGLRGYWRRKGYEKLNREGRGRRTSRSELGSTSTRRRRFSWRIKIKPKLKI 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGS--AGRSTLKEYDEK 120
             RLPS KK  +WLRD+YVK M+ FANSRV  SG  GGG  G  G+   G+  LKEYDEK
Sbjct: 61  -SRLPSPKKFFIWLRDAYVKMMMGFANSRVCASGGYGGGAIGSNGAYGFGKGPLKEYDEK 120

Query: 121 MITEIYKSLVVAQGRLPPPESVR 141
           +I +IYKSLV+AQG+L P ++ R
Sbjct: 121 VIVDIYKSLVMAQGQLVPRDAAR 142

[Close]

BLAST of Lsi02G024460 vs. TrEMBL
Match: A0A067H7Z2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031898mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-31
Identity = 82/143 (57.34%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKL-AGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRL 60
           MEGVS +VY GL+ Y R+K Y KL     GRRT   +LG+T  RRRR  WRIKI PKL++
Sbjct: 1   MEGVSTTVYKGLRGYWRRKGYEKLNREGRGRRTSRSELGSTSTRRRRFSWRIKIKPKLKI 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGS--AGRSTLKEYDEK 120
             RLPS KK  +WLRD+YVK M+ FANSRV  SG  GGG  G  G+   G+  LKEYDEK
Sbjct: 61  -SRLPSPKKFFIWLRDAYVKMMMGFANSRVCASGGYGGGAIGSNGAYGFGKGPLKEYDEK 120

Query: 121 MITEIYKSLVVAQGRLPPPESVR 141
           +I +IYKSLV+AQG+L P ++ R
Sbjct: 121 VIVDIYKSLVMAQGQLVPRDAAR 142

[Close]

BLAST of Lsi02G024460 vs. TrEMBL
Match: W9RL25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007465 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.8e-28
Identity = 76/141 (53.90%), Postives = 96/141 (68.09%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLF 60
           MEGVS S+Y GL+ Y +++ Y +L GS  RR       +    R++R WRI+I+PKL   
Sbjct: 1   MEGVSESMYKGLRGYWKRRGYERLNGSGSRRRKR----SLDSIRKKRSWRIRIAPKLGFL 60

Query: 61  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGG-GGDGIWGSAGRSTLKEYDEKMI 120
           RR+PS KKLL+WLRD+YVK ML FANSRV  +G      GDGI G  GR  LKEYD+KMI
Sbjct: 61  RRVPSPKKLLVWLRDAYVKLMLGFANSRVCSTGYGSAICGDGI-GGFGRGPLKEYDDKMI 120

Query: 121 TEIYKSLVVAQGRLPPPESVR 141
            EIYKSLV+A G+L P ++ R
Sbjct: 121 VEIYKSLVLAHGQLVPRDAAR 136

[Close]

BLAST of Lsi02G024460 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.1e-20
Identity = 62/126 (49.21%), Postives = 79/126 (62.70%), Query Frame = 1


Query: 13  KRYLRK-KSYRKLAGSV----GRRTDT-VQLGATGGRRRRRIWRIKISPKLRLFRRLPSL 72
           KRY R+ + Y KL GS     GRR    V++  T   R++R WRIKI PKLR+  +  S 
Sbjct: 6   KRYWRRWRGYEKLDGSSETTSGRRKGKRVKMDPT---RKKRFWRIKIVPKLRIL-KTASP 65

Query: 73  KKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMITEIYKSL 132
           KK L+WLRDSYVK M+  ANSRV+GS   GG G       G   +KEYDEKM+ EIYKS+
Sbjct: 66  KKFLVWLRDSYVKMMMRLANSRVVGSSGYGGSG------FGSGQMKEYDEKMLVEIYKSI 121

[Close]

BLAST of Lsi02G024460 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.7e-20
Identity = 59/130 (45.38%), Postives = 76/130 (58.46%), Query Frame = 1


Query: 4   VSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLFRRL 63
           + +  +  L+ Y R     K A S  R    V++  T   R+RR WRIKI PKLR+ ++ 
Sbjct: 1   MEIRYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPT---RKRRFWRIKIVPKLRILKK- 60

Query: 64  PSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMITEIY 123
            S KKLL WLRD+YV  ML  ANSRV+GS      G G +G       KEYDEK + EIY
Sbjct: 61  ASPKKLLTWLRDAYVNMMLRLANSRVVGSSY----GYGEYGYGSGLASKEYDEKKLVEIY 120

Query: 124 KSLVVAQGRL 134
           KS+++AQG L
Sbjct: 121 KSILMAQGNL 122

[Close]

BLAST of Lsi02G024460 vs. NCBI nr
Match: gi|449436451|ref|XP_004136006.1| (PREDICTED: uncharacterized protein LOC101203703 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 6.0e-71
Identity = 141/154 (91.56%), Postives = 146/154 (94.81%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGG-RRRRRIWRIKISPKLRL 60
           MEGVSVSVYNGL+RYLR+KSYRKLA SVGRRTDT QLGA GG RRRRRIWRIKISPKLRL
Sbjct: 1   MEGVSVSVYNGLRRYLRRKSYRKLAASVGRRTDTAQLGAAGGGRRRRRIWRIKISPKLRL 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMI 120
           FRR+PSLKKLLLWLRDSYVKAMLAFANSRVIGSG+  GGGDGIWG AGRSTLKEYDEKMI
Sbjct: 61  FRRMPSLKKLLLWLRDSYVKAMLAFANSRVIGSGSGSGGGDGIWGGAGRSTLKEYDEKMI 120

Query: 121 TEIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE 154
           TEIYKSLVVAQGRLPPPE+VRPSW GGRLPTVAE
Sbjct: 121 TEIYKSLVVAQGRLPPPETVRPSWGGGRLPTVAE 154

[Close]

BLAST of Lsi02G024460 vs. NCBI nr
Match: gi|659101268|ref|XP_008451518.1| (PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 3.3e-69
Identity = 138/154 (89.61%), Postives = 143/154 (92.86%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGG-RRRRRIWRIKISPKLRL 60
           MEGVSVSVYNGL+RYLR+KSYRKLA SVG RT+T QLGA GG RRRRRIWRIKISPKLRL
Sbjct: 1   MEGVSVSVYNGLRRYLRRKSYRKLAASVGHRTETAQLGAAGGGRRRRRIWRIKISPKLRL 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMI 120
           FRR+PSLKKLLLWLRDSYVKAMLAFANSRVIG G+  GGGDGIWG AGRSTLKEYDEKMI
Sbjct: 61  FRRMPSLKKLLLWLRDSYVKAMLAFANSRVIGGGSGSGGGDGIWGGAGRSTLKEYDEKMI 120

Query: 121 TEIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE 154
           TEIYKSLVVAQGRLPPPE VRPSW GGRLPTVAE
Sbjct: 121 TEIYKSLVVAQGRLPPPEPVRPSWGGGRLPTVAE 154

[Close]

BLAST of Lsi02G024460 vs. NCBI nr
Match: gi|802689209|ref|XP_012082843.1| (PREDICTED: uncharacterized protein LOC105642581 [Jatropha curcas])

HSP 1 Score: 143.7 bits (361), Expect = 2.7e-31
Identity = 79/153 (51.63%), Postives = 112/153 (73.20%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLF 60
           MEGVS ++Y  ++RY R++ Y +L  S  RR +TV+LG+T  +++RR+WRIKI PKL++F
Sbjct: 1   MEGVSTAMYTKVRRYWRRRGYERLNESTRRRQNTVELGSTL-QKKRRVWRIKIKPKLKIF 60

Query: 61  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMIT 120
           + + S +K  +WLRD+YVK M+ FANSRVIG+G  GG GDG+  + G+  +KEYDE+MI 
Sbjct: 61  K-MSSPRKFFVWLRDAYVKMMMGFANSRVIGAGYGGGAGDGL-ATFGKRPVKEYDERMII 120

Query: 121 EIYKSLVVAQGRLPPPESVRPSWVGGRLPTVAE 154
           EIYKSL++AQG+L   E+ R   V  RLP + E
Sbjct: 121 EIYKSLMMAQGQLVAREAPRFGSV-PRLPAIVE 149

[Close]

BLAST of Lsi02G024460 vs. NCBI nr
Match: gi|1009148412|ref|XP_015891923.1| (PREDICTED: uncharacterized protein LOC107426304 [Ziziphus jujuba])

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-31
Identity = 78/140 (55.71%), Postives = 99/140 (70.71%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKLAGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRLF 60
           MEGVS SVY GL+ Y  ++ Y KL G   RR   V+LG+T  +RR+R+WRIK++PKL   
Sbjct: 46  MEGVSASVYKGLRGYWTRRGYEKLNGLDRRRKSRVELGST--QRRKRVWRIKVAPKLGFI 105

Query: 61  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGSAGRSTLKEYDEKMIT 120
           RR+PS KKLL+WLRD+YVK ML FANSRV  S   G   +   G+ G+  LKEYDEKMI 
Sbjct: 106 RRMPSPKKLLVWLRDAYVKLMLGFANSRVFSSAYGGVICNDGTGAFGKGPLKEYDEKMIV 165

Query: 121 EIYKSLVVAQGRLPPPESVR 141
           EIYKSL +AQG+L P ++ +
Sbjct: 166 EIYKSLALAQGQLVPRDAAK 183

[Close]

BLAST of Lsi02G024460 vs. NCBI nr
Match: gi|567903906|ref|XP_006444441.1| (hypothetical protein CICLE_v10022679mg [Citrus clementina])

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-31
Identity = 82/143 (57.34%), Postives = 100/143 (69.93%), Query Frame = 1


Query: 1   MEGVSVSVYNGLKRYLRKKSYRKL-AGSVGRRTDTVQLGATGGRRRRRIWRIKISPKLRL 60
           MEGVS +VY GL+ Y R+K Y KL     GRRT   +LG+T  RRRR  WRIKI PKL++
Sbjct: 1   MEGVSTTVYKGLRGYWRRKGYEKLNREGRGRRTSRSELGSTSTRRRRFSWRIKIKPKLKI 60

Query: 61  FRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGTTGGGGDGIWGS--AGRSTLKEYDEK 120
             RLPS KK  +WLRD+YVK M+ FANSRV  SG  GGG  G  G+   G+  LKEYDEK
Sbjct: 61  -SRLPSPKKFFIWLRDAYVKMMMGFANSRVCASGGYGGGAIGSNGAYGFGKGPLKEYDEK 120

Query: 121 MITEIYKSLVVAQGRLPPPESVR 141
           +I +IYKSLV+AQG+L P ++ R
Sbjct: 121 VIVDIYKSLVMAQGQLVPRDAAR 142

The following BLAST results are available for this feature:

BLAST of Lsi02G024460 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G024460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Z4_CUCSA	4.2e-71	91.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405950 PE=4 SV=1	[more]
A0A067K7J9_JATCU	1.9e-31	51.63	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13986 PE=4 SV=1	[more]
V4U6A3_9ROSI	2.5e-31	57.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022679mg PE=4 SV=1	[more]
A0A067H7Z2_CITSI	2.5e-31	57.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031898mg PE=4 SV=1	[more]
W9RL25_9ROSA	9.8e-28	53.90	Uncharacterized protein OS=Morus notabilis GN=L484_007465 PE=4 SV=1	[more]

BLAST of Lsi02G024460 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62650.2	5.1e-20	49.21	unknown protein	[more]
AT2G47485.1	6.7e-20	45.38	unknown protein	[more]

BLAST of Lsi02G024460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436451\|ref\|XP_004136006.1\|	6.0e-71	91.56	PREDICTED: uncharacterized protein LOC101203703 [Cucumis sativus]	[more]
gi\|659101268\|ref\|XP_008451518.1\|	3.3e-69	89.61	PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo]	[more]
gi\|802689209\|ref\|XP_012082843.1\|	2.7e-31	51.63	PREDICTED: uncharacterized protein LOC105642581 [Jatropha curcas]	[more]
gi\|1009148412\|ref\|XP_015891923.1\|	3.6e-31	55.71	PREDICTED: uncharacterized protein LOC107426304 [Ziziphus jujuba]	[more]
gi\|567903906\|ref\|XP_006444441.1\|	3.6e-31	57.34	hypothetical protein CICLE_v10022679mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G024460.1	Lsi02G024460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33702	FAMILY NOT NAMED	coord: 1..140 score: 4.2
None	No IPR available	PANTHER	PTHR33702:SF5	SUBFAMILY NOT NAMED	coord: 1..140 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G024460	Csa7G405950	Cucumber (Chinese Long) v2	culsiB503
Lsi02G024460	Csa4G002550	Cucumber (Chinese Long) v2	culsiB267
Lsi02G024460	CSPI07G17910	Wild cucumber (PI 183967)	cpilsiB517
Lsi02G024460	CSPI04G01100	Wild cucumber (PI 183967)	cpilsiB266
Lsi02G024460	Cucsa.205250	Cucumber (Gy14) v1	cgylsiB351
Lsi02G024460	Cucsa.096850	Cucumber (Gy14) v1	cgylsiB110
Lsi02G024460	CmaCh17G010550	Cucurbita maxima (Rimu)	cmalsiB348
Lsi02G024460	CmoCh08G004390	Cucurbita moschata (Rifu)	cmolsiB809
Lsi02G024460	CmoCh17G010280	Cucurbita moschata (Rifu)	cmolsiB337
Lsi02G024460	Cla015115	Watermelon (97103) v1	lsiwmB175
Lsi02G024460	Cla017381	Watermelon (97103) v1	lsiwmB178
Lsi02G024460	MELO3C017929	Melon (DHL92) v3.5.1	lsimeB226
Lsi02G024460	MELO3C015948	Melon (DHL92) v3.5.1	lsimeB192
Lsi02G024460	ClCG10G011190	Watermelon (Charleston Gray)	lsiwcgB162
Lsi02G024460	ClCG09G005350	Watermelon (Charleston Gray)	lsiwcgB159
Lsi02G024460	MELO3C015948.2	Melon (DHL92) v3.6.1	lsimedB201
Lsi02G024460	Cla97C09G167810	Watermelon (97103) v2	lsiwmbB212
Lsi02G024460	Bhi09G000780	Wax gourd	lsiwgoB271
Lsi02G024460	Cp4.1LG12g05930	Cucurbita pepo (Zucchini)	cpelsiB113
Lsi02G024460	Cp4.1LG17g07320	Cucurbita pepo (Zucchini)	cpelsiB262
Lsi02G024460	Carg07390	Silver-seed gourd	carlsiB698
Lsi02G024460	Carg07145	Silver-seed gourd	carlsiB098
Lsi02G024460	Carg12085	Silver-seed gourd	carlsiB511
Lsi02G024460	CsaV3_4G001080	Cucumber (Chinese Long) v3	cuclsiB287
Lsi02G024460	CsaV3_7G029720	Cucumber (Chinese Long) v3	cuclsiB538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G024460	Wax gourd	lsiwgoB202
Lsi02G024460	Wax gourd	lsiwgoB218
Lsi02G024460	Bottle gourd (USVL1VR-Ls)	lsilsiB091
Lsi02G024460	Cucurbita maxima (Rimu)	cmalsiB232
Lsi02G024460	Cucurbita maxima (Rimu)	cmalsiB420
Lsi02G024460	Cucurbita maxima (Rimu)	cmalsiB822
Lsi02G024460	Cucurbita moschata (Rifu)	cmolsiB220
Lsi02G024460	Cucurbita moschata (Rifu)	cmolsiB406
Lsi02G024460	Cucumber (Gy14) v2	cgyblsiB472
Lsi02G024460	Melon (DHL92) v3.6.1	lsimedB237
Lsi02G024460	Cucumber (Chinese Long) v3	cuclsiB471
Lsi02G024460	Watermelon (97103) v2	lsiwmbB162