Cp4.1LG12g05930 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g05930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Carrier protein, putative
Location	Cp4.1LG12 : 7846950 .. 7847982 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATAAAATCCAATGGCGAGGATCTCACATCTTGCCATCATCATTCAATTTGGGTGGCAAAGCAAGCAAGCGATACAGGTTAGAACAGAGTCGCCTCCCTGCTGCCCATTTATGAGCACCACCACCCCATCTTCTTTCTCCTCCTCCCCAACAAAATTATTAATTATAACTCTCTCTCTCTCTTTAAATCACTCCAATTTCTCACTCCATTCCCAAATTTCTGGATTACATTTCCATGGAAGGTGTTTCTGTGAGTGTTTATAATGGCTTGCGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCTGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCCGGAGGGAGGCGGCGGCGCCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTCAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGCGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAACTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCAACGGTGGCGGAATAATCCGGTGGAGATTATGGGGTTTGGAGGTGGACGGTAAGGATCTACCCAAAAAAGGAGAAGAAAATCCTATCCGTTGATTTTTTTGTACTCCTTTTTTTTCCACTAAACTTTGTAATGTAATGTTAAAAGTTAGGAATTAATTGAAATATTAAGTGGTTTATTATCATAATTAAAAATATAATTAAATTAACAAAGAAAAATGACATTATCTTAAACATTATAATTGATGAACTAAATCTACCTTAATGATTAAAAAAAATTAATAATCATTTAAAGTATCTTAAATAATATATATATATATATTTAATTTAATAGCAATATTTTATATTTACATTTTAAAATAA

mRNA sequence

CACATAAAATCCAATGGCGAGGATCTCACATCTTGCCATCATCATTCAATTTGGGTGGCAAAGCAAGCAAGCGATACAGGTGTTTCTGTGAGTGTTTATAATGGCTTGCGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCTGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCCGGAGGGAGGCGGCGGCGCCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTCAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGCGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAACTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCAACGGTGGCGGAATAATCCGGTGGAGATTATGGGGTTTGGAGGTGGACGGTAAGGATCTACCCAAAAAAGGAGAAGAAAATCCTATCCGTTGATTTTTTTGTACTCCTTTTTTTTCCACTAAACTTTGTAATGTAATGTTAAAAGTTAGGAATTAATTGAAATATTAAGTGGTTTATTATCATAATTAAAAATATAATTAAATTAACAAAGAAAAATGACATTATCTTAAACATTATAATTGATGAACTAAATCTACCTTAATGATTAAAAAAAATTAATAATCATTTAAAGTATCTTAAATAATATATATATATATATTTAATTTAATAGCAATATTTTATATTTACATTTTAAAATAA

Coding sequence (CDS)

CACATAAAATCCAATGGCGAGGATCTCACATCTTGCCATCATCATTCAATTTGGGTGGCAAAGCAAGCAAGCGATACAGGTGTTTCTGTGAGTGTTTATAATGGCTTGCGGCGCTATTGGAGGCGGAAGAGCTACCGGAAGCTGGCTGGATCGGTGGGTCGTGGCAGGCCGGAGACTGTGCAACTTGGTGCCGCCGGAGGGAGGCGGCGGCGCCGCCGTCTGTGGCGGATCAAGATCTCGCCTAAACTCAGGCTGTTCCGGCGGCTGCCGTCGCTCAAGAAGCTGCTACTTTGGCTGAGGGATTCGTATGTGAAGGCGATGTTGGCGTTTGCTAACTCGAGGGTCATCGGCTCCGGCGGCGACGGGATCTGGGGCGTCGCCGGAAGGAGCACGTTGAAGGAGTATGATGAGAAAATGATCACTGAGATCTATAACTCGTTGGTGGTGGCGCAGGGACGGTTGCCACCGCCGGAATCTGTCCGACTGGGTAGGGTCGGCGGGCGGTTGCCAACGGTGGCGGAATAA

Protein sequence

HIKSNGEDLTSCHHHSIWVAKQASDTGVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVAGRSTLKEYDEKMITEIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE

Homology

[Close]

BLAST of Cp4.1LG12g05930 vs. TrEMBL
Match: A0A0A0K7Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405950 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.0e-62
Identity = 132/153 (86.27%), Postives = 136/153 (88.89%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVSVSVYNGLRRY RRKSYRKLA SVGR R +T QLGAAGG RRRRR+WRIKISPKLRLF
Sbjct: 3   GVSVSVYNGLRRYLRRKSYRKLAASVGR-RTDTAQLGAAGGGRRRRRIWRIKISPKLRLF 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGS-----GGDGIWGVAGRSTLKEYDEKMIT 146
           RR+PSLKKLLLWLRDSYVKAMLAFANSRVIGS     GGDGIWG AGRSTLKEYDEKMIT
Sbjct: 63  RRMPSLKKLLLWLRDSYVKAMLAFANSRVIGSGSGSGGGDGIWGGAGRSTLKEYDEKMIT 122

Query: 147 EIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE 175
           EIY SLVVAQGRLPPPE+VR    GGRLPTVAE
Sbjct: 123 EIYKSLVVAQGRLPPPETVRPSWGGGRLPTVAE 154

[Close]

BLAST of Cp4.1LG12g05930 vs. TrEMBL
Match: W9RL25_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007465 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.9e-30
Identity = 78/143 (54.55%), Postives = 97/143 (67.83%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVS S+Y GLR YW+R+ Y +L GS  R R  ++         R++R WRI+I+PKL   
Sbjct: 3   GVSESMYKGLRGYWKRRGYERLNGSGSRRRKRSLD------SIRKKRSWRIRIAPKLGFL 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSG------GDGIWGVAGRSTLKEYDEKMI 146
           RR+PS KKLL+WLRD+YVK ML FANSRV  +G      GDGI G  GR  LKEYD+KMI
Sbjct: 63  RRVPSPKKLLVWLRDAYVKLMLGFANSRVCSTGYGSAICGDGIGGF-GRGPLKEYDDKMI 122

Query: 147 TEIYNSLVVAQGRLPPPESVRLG 164
            EIY SLV+A G+L P ++ RLG
Sbjct: 123 VEIYKSLVLAHGQLVPRDAARLG 138

[Close]

BLAST of Cp4.1LG12g05930 vs. TrEMBL
Match: B9RNJ2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348340 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.4e-29
Identity = 80/156 (51.28%), Postives = 99/156 (63.46%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAG-----GRRRRRRLWRIKISP 86
           GVS S+Y  +R YWRR+ Y++L  S  R R  TV+LG        G RRR+  WRIKI P
Sbjct: 3   GVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKIKP 62

Query: 87  KLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVA---GRSTLKEYDEK 146
           KL++F+R  S KK  +WLRD+YV  ML FANSRVIG G  G  G+A   G+  LKEYDEK
Sbjct: 63  KLKIFKR-ASPKKFFVWLRDAYVNMMLGFANSRVIGPGYGGGGGIATNFGKGPLKEYDEK 122

Query: 147 MITEIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE 175
           MI +IY SLV  QG+L P ++   G V  RL  + E
Sbjct: 123 MIIQIYKSLVAGQGQLVPHDAAAFGSV-PRLTAIVE 156

[Close]

BLAST of Cp4.1LG12g05930 vs. TrEMBL
Match: A0A067H7Z2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031898mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 78/144 (54.17%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVS +VY GLR YWRRK Y KL    GRGR  +     +   RRRR  WRIKI PKL++ 
Sbjct: 3   GVSTTVYKGLRGYWRRKGYEKL-NREGRGRRTSRSELGSTSTRRRRFSWRIKIKPKLKI- 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVA-------GRSTLKEYDEKM 146
            RLPS KK  +WLRD+YVK M+ FANSRV  SGG G   +        G+  LKEYDEK+
Sbjct: 63  SRLPSPKKFFIWLRDAYVKMMMGFANSRVCASGGYGGGAIGSNGAYGFGKGPLKEYDEKV 122

Query: 147 ITEIYNSLVVAQGRLPPPESVRLG 164
           I +IY SLV+AQG+L P ++ RLG
Sbjct: 123 IVDIYKSLVMAQGQLVPRDAARLG 144

[Close]

BLAST of Cp4.1LG12g05930 vs. TrEMBL
Match: V4U6A3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022679mg PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 78/144 (54.17%), Postives = 94/144 (65.28%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVS +VY GLR YWRRK Y KL    GRGR  +     +   RRRR  WRIKI PKL++ 
Sbjct: 3   GVSTTVYKGLRGYWRRKGYEKL-NREGRGRRTSRSELGSTSTRRRRFSWRIKIKPKLKI- 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVA-------GRSTLKEYDEKM 146
            RLPS KK  +WLRD+YVK M+ FANSRV  SGG G   +        G+  LKEYDEK+
Sbjct: 63  SRLPSPKKFFIWLRDAYVKMMMGFANSRVCASGGYGGGAIGSNGAYGFGKGPLKEYDEKV 122

Query: 147 ITEIYNSLVVAQGRLPPPESVRLG 164
           I +IY SLV+AQG+L P ++ RLG
Sbjct: 123 IVDIYKSLVMAQGQLVPRDAARLG 144

[Close]

BLAST of Cp4.1LG12g05930 vs. TAIR10
Match: AT3G62650.2 (AT3G62650.2 unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-21
Identity = 60/122 (49.18%), Postives = 79/122 (64.75%), Query Frame = 1


Query: 37  RRYWRR-KSYRKLAGSV----GRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLFRRLPS 96
           +RYWRR + Y KL GS     GR + + V++       R++R WRIKI PKLR+  +  S
Sbjct: 6   KRYWRRWRGYEKLDGSSETTSGRRKGKRVKMDPT----RKKRFWRIKIVPKLRIL-KTAS 65

Query: 97  LKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVAGRSTLKEYDEKMITEIYNSLVVAQ 154
            KK L+WLRDSYVK M+  ANSRV+GS G G  G  G   +KEYDEKM+ EIY S+++ Q
Sbjct: 66  PKKFLVWLRDSYVKMMMRLANSRVVGSSGYGGSGF-GSGQMKEYDEKMLVEIYKSILMVQ 121

[Close]

BLAST of Cp4.1LG12g05930 vs. TAIR10
Match: AT2G47485.1 (AT2G47485.1 unknown protein)

HSP 1 Score: 99.0 bits (245), Expect = 3.1e-21
Identity = 61/124 (49.19%), Postives = 78/124 (62.90%), Query Frame = 1


Query: 38  RYWRR-KSYRKLAGSV-----GRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLFRRLPS 97
           RYWRR + Y++L GS      GR   + V++       R+RR WRIKI PKLR+ ++  S
Sbjct: 4   RYWRRLRGYQRLDGSAKKASSGRRNVKRVKMDPT----RKRRFWRIKIVPKLRILKK-AS 63

Query: 98  LKKLLLWLRDSYVKAMLAFANSRVIGSG-GDGIWGVAGRSTLKEYDEKMITEIYNSLVVA 155
            KKLL WLRD+YV  ML  ANSRV+GS  G G +G       KEYDEK + EIY S+++A
Sbjct: 64  PKKLLTWLRDAYVNMMLRLANSRVVGSSYGYGEYGYGSGLASKEYDEKKLVEIYKSILMA 122

[Close]

BLAST of Cp4.1LG12g05930 vs. NCBI nr
Match: gi|449436451|ref|XP_004136006.1| (PREDICTED: uncharacterized protein LOC101203703 [Cucumis sativus])

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-61
Identity = 132/153 (86.27%), Postives = 136/153 (88.89%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVSVSVYNGLRRY RRKSYRKLA SVGR R +T QLGAAGG RRRRR+WRIKISPKLRLF
Sbjct: 3   GVSVSVYNGLRRYLRRKSYRKLAASVGR-RTDTAQLGAAGGGRRRRRIWRIKISPKLRLF 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGS-----GGDGIWGVAGRSTLKEYDEKMIT 146
           RR+PSLKKLLLWLRDSYVKAMLAFANSRVIGS     GGDGIWG AGRSTLKEYDEKMIT
Sbjct: 63  RRMPSLKKLLLWLRDSYVKAMLAFANSRVIGSGSGSGGGDGIWGGAGRSTLKEYDEKMIT 122

Query: 147 EIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE 175
           EIY SLVVAQGRLPPPE+VR    GGRLPTVAE
Sbjct: 123 EIYKSLVVAQGRLPPPETVRPSWGGGRLPTVAE 154

[Close]

BLAST of Cp4.1LG12g05930 vs. NCBI nr
Match: gi|659101268|ref|XP_008451518.1| (PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo])

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-60
Identity = 131/153 (85.62%), Postives = 133/153 (86.93%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVSVSVYNGLRRY RRKSYRKLA SVG  R ET QLGAAGG RRRRR+WRIKISPKLRLF
Sbjct: 3   GVSVSVYNGLRRYLRRKSYRKLAASVGH-RTETAQLGAAGGGRRRRRIWRIKISPKLRLF 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIG-----SGGDGIWGVAGRSTLKEYDEKMIT 146
           RR+PSLKKLLLWLRDSYVKAMLAFANSRVIG      GGDGIWG AGRSTLKEYDEKMIT
Sbjct: 63  RRMPSLKKLLLWLRDSYVKAMLAFANSRVIGGGSGSGGGDGIWGGAGRSTLKEYDEKMIT 122

Query: 147 EIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE 175
           EIY SLVVAQGRLPPPE VR    GGRLPTVAE
Sbjct: 123 EIYKSLVVAQGRLPPPEPVRPSWGGGRLPTVAE 154

[Close]

BLAST of Cp4.1LG12g05930 vs. NCBI nr
Match: gi|1009148412|ref|XP_015891923.1| (PREDICTED: uncharacterized protein LOC107426304 [Ziziphus jujuba])

HSP 1 Score: 144.4 bits (363), Expect = 1.8e-31
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVS SVY GLR YW R+ Y KL G + R R   V+LG+    +RR+R+WRIK++PKL   
Sbjct: 48  GVSASVYKGLRGYWTRRGYEKLNG-LDRRRKSRVELGST---QRRKRVWRIKVAPKLGFI 107

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGI-----WGVAGRSTLKEYDEKMIT 146
           RR+PS KKLL+WLRD+YVK ML FANSRV  S   G+      G  G+  LKEYDEKMI 
Sbjct: 108 RRMPSPKKLLVWLRDAYVKLMLGFANSRVFSSAYGGVICNDGTGAFGKGPLKEYDEKMIV 167

Query: 147 EIYNSLVVAQGRLPPPESVRLG 164
           EIY SL +AQG+L P ++ +LG
Sbjct: 168 EIYKSLALAQGQLVPRDAAKLG 185

[Close]

BLAST of Cp4.1LG12g05930 vs. NCBI nr
Match: gi|703125798|ref|XP_010103396.1| (hypothetical protein L484_007465 [Morus notabilis])

HSP 1 Score: 138.7 bits (348), Expect = 1.0e-29
Identity = 78/143 (54.55%), Postives = 97/143 (67.83%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAGGRRRRRRLWRIKISPKLRLF 86
           GVS S+Y GLR YW+R+ Y +L GS  R R  ++         R++R WRI+I+PKL   
Sbjct: 3   GVSESMYKGLRGYWKRRGYERLNGSGSRRRKRSLD------SIRKKRSWRIRIAPKLGFL 62

Query: 87  RRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSG------GDGIWGVAGRSTLKEYDEKMI 146
           RR+PS KKLL+WLRD+YVK ML FANSRV  +G      GDGI G  GR  LKEYD+KMI
Sbjct: 63  RRVPSPKKLLVWLRDAYVKLMLGFANSRVCSTGYGSAICGDGIGGF-GRGPLKEYDDKMI 122

Query: 147 TEIYNSLVVAQGRLPPPESVRLG 164
            EIY SLV+A G+L P ++ RLG
Sbjct: 123 VEIYKSLVLAHGQLVPRDAARLG 138

[Close]

BLAST of Cp4.1LG12g05930 vs. NCBI nr
Match: gi|255548549|ref|XP_002515331.1| (PREDICTED: uncharacterized protein LOC8265169 [Ricinus communis])

HSP 1 Score: 136.3 bits (342), Expect = 4.9e-29
Identity = 80/156 (51.28%), Postives = 99/156 (63.46%), Query Frame = 1


Query: 27  GVSVSVYNGLRRYWRRKSYRKLAGSVGRGRPETVQLGAAG-----GRRRRRRLWRIKISP 86
           GVS S+Y  +R YWRR+ Y++L  S  R R  TV+LG        G RRR+  WRIKI P
Sbjct: 3   GVSASMYTKIRSYWRRRGYQRLNESGRRRRMNTVELGGGSATTTRGSRRRKMSWRIKIKP 62

Query: 87  KLRLFRRLPSLKKLLLWLRDSYVKAMLAFANSRVIGSGGDGIWGVA---GRSTLKEYDEK 146
           KL++F+R  S KK  +WLRD+YV  ML FANSRVIG G  G  G+A   G+  LKEYDEK
Sbjct: 63  KLKIFKR-ASPKKFFVWLRDAYVNMMLGFANSRVIGPGYGGGGGIATNFGKGPLKEYDEK 122

Query: 147 MITEIYNSLVVAQGRLPPPESVRLGRVGGRLPTVAE 175
           MI +IY SLV  QG+L P ++   G V  RL  + E
Sbjct: 123 MIIQIYKSLVAGQGQLVPHDAAAFGSV-PRLTAIVE 156

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g05930 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g05930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Z4_CUCSA	9.0e-62	86.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G405950 PE=4 SV=1	[more]
W9RL25_9ROSA	6.9e-30	54.55	Uncharacterized protein OS=Morus notabilis GN=L484_007465 PE=4 SV=1	[more]
B9RNJ2_RICCO	3.4e-29	51.28	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1348340 PE=4 SV=1	[more]
A0A067H7Z2_CITSI	1.0e-28	54.17	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031898mg PE=4 SV=1	[more]
V4U6A3_9ROSI	1.0e-28	54.17	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022679mg PE=4 SV=1	[more]

BLAST of Cp4.1LG12g05930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62650.2	1.8e-21	49.18	unknown protein	[more]
AT2G47485.1	3.1e-21	49.19	unknown protein	[more]

BLAST of Cp4.1LG12g05930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449436451\|ref\|XP_004136006.1\|	1.3e-61	86.27	PREDICTED: uncharacterized protein LOC101203703 [Cucumis sativus]	[more]
gi\|659101268\|ref\|XP_008451518.1\|	1.1e-60	85.62	PREDICTED: uncharacterized protein LOC103492779 [Cucumis melo]	[more]
gi\|1009148412\|ref\|XP_015891923.1\|	1.8e-31	55.63	PREDICTED: uncharacterized protein LOC107426304 [Ziziphus jujuba]	[more]
gi\|703125798\|ref\|XP_010103396.1\|	1.0e-29	54.55	hypothetical protein L484_007465 [Morus notabilis]	[more]
gi\|255548549\|ref\|XP_002515331.1\|	4.9e-29	51.28	PREDICTED: uncharacterized protein LOC8265169 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g05930.1	Cp4.1LG12g05930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33702	FAMILY NOT NAMED	coord: 22..164 score: 1.7
None	No IPR available	PANTHER	PTHR33702:SF5	SUBFAMILY NOT NAMED	coord: 22..164 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g05930	Cucsa.096850	Cucumber (Gy14) v1	cgycpeB0185
Cp4.1LG12g05930	Cucsa.205250	Cucumber (Gy14) v1	cgycpeB0579
Cp4.1LG12g05930	CmaCh17G010550	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g05930	CmoCh17G010280	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g05930	CmoCh08G004390	Cucurbita moschata (Rifu)	cmocpeB839
Cp4.1LG12g05930	Cla015115	Watermelon (97103) v1	cpewmB131
Cp4.1LG12g05930	Cla017381	Watermelon (97103) v1	cpewmB141
Cp4.1LG12g05930	Csa4G002550	Cucumber (Chinese Long) v2	cpecuB139
Cp4.1LG12g05930	Csa7G405950	Cucumber (Chinese Long) v2	cpecuB161
Cp4.1LG12g05930	MELO3C017929	Melon (DHL92) v3.5.1	cpemeB146
Cp4.1LG12g05930	MELO3C015948	Melon (DHL92) v3.5.1	cpemeB118
Cp4.1LG12g05930	ClCG09G005350	Watermelon (Charleston Gray)	cpewcgB126
Cp4.1LG12g05930	ClCG10G011190	Watermelon (Charleston Gray)	cpewcgB134
Cp4.1LG12g05930	CSPI07G17910	Wild cucumber (PI 183967)	cpecpiB163
Cp4.1LG12g05930	CSPI04G01100	Wild cucumber (PI 183967)	cpecpiB141
Cp4.1LG12g05930	Lsi02G024460	Bottle gourd (USVL1VR-Ls)	cpelsiB113
Cp4.1LG12g05930	MELO3C015948.2	Melon (DHL92) v3.6.1	cpemedB145
Cp4.1LG12g05930	MELO3C017929.2	Melon (DHL92) v3.6.1	cpemedB172
Cp4.1LG12g05930	CsaV3_4G001080	Cucumber (Chinese Long) v3	cpecucB0162
Cp4.1LG12g05930	CsaV3_7G029720	Cucumber (Chinese Long) v3	cpecucB0188
Cp4.1LG12g05930	Bhi09G000780	Wax gourd	cpewgoB0210
Cp4.1LG12g05930	Bhi11G001044	Wax gourd	cpewgoB0171
Cp4.1LG12g05930	Carg12085	Silver-seed gourd	carcpeB0801
Cp4.1LG12g05930	Carg07145	Silver-seed gourd	carcpeB0158
Cp4.1LG12g05930	Carg07390	Silver-seed gourd	carcpeB1070

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g05930	Cp4.1LG17g07320	Cucurbita pepo (Zucchini)	cpecpeB157
Cp4.1LG12g05930	Cp4.1LG02g16290	Cucurbita pepo (Zucchini)	cpecpeB181

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g05930	Cucurbita maxima (Rimu)	cmacpeB260
Cp4.1LG12g05930	Cucurbita maxima (Rimu)	cmacpeB465
Cp4.1LG12g05930	Cucurbita maxima (Rimu)	cmacpeB902
Cp4.1LG12g05930	Cucurbita moschata (Rifu)	cmocpeB224
Cp4.1LG12g05930	Cucurbita moschata (Rifu)	cmocpeB425
Cp4.1LG12g05930	Bottle gourd (USVL1VR-Ls)	cpelsiB116
Cp4.1LG12g05930	Cucumber (Gy14) v2	cgybcpeB904
Cp4.1LG12g05930	Cucumber (Gy14) v2	cgybcpeB906
Cp4.1LG12g05930	Silver-seed gourd	carcpeB1143