Lsi02G017000 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi02G017000
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_4
Locationchr02 : 22767646 .. 22768473 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATTGTAGCTAAGGAATCTTACAACAAAGGAGAAGATGCTTCCATCGTCAATGAAGATCCATATCCACACGATGAAGAAGAAGCCGTAGAAACGCTCTCTCTATGCGATCTTCCAATTTACAGCGATGAATCAAATTGCGATGATTACTCCAAGCAGGATGATCAGAGCGGTTCGTTTGATAACGAAGATACATTCTTCGAGTTTTTCAGGGACGATTTCTCTGTTTCTAATTCAACTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATTCACAAAACAAAGGAAGAATTTCAACGGAGAAATCACACATGTTCAACGGTAAGAAATCGTCTGTAATTGATACTAGAGGTCGTGAGATCGCTTATACGAGAACGACGAGAGGAGGAGTTAAAAGCTTCGATCCATTTTCCATTTCATTGCCGAAGAATCCTGAGTACATCAAACGGAAGAGAAGATTGAAAATGAAGAAATACGACTTACCGACGGAGAGAGCGATGATACTGCAATCGTCACCGACGAAATCACGCTGGTTCTTGTTTCTGTTTGGTAGCGCGAGCTTCCCGAAGGAGATGGAACTGAGTGAAATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGCCGTCGGAGGAGAGGAAAGTGGCCACAGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTCTTAGGGCTATGGTAATAGGCTGCGGTGGCAGCAGCAATCAAAACGGCGCCGTAAAAGGTTCCTTCAGGCCCATTTCAGTCGTGTGA

mRNA sequence

ATGGTTATTGTAGCTAAGGAATCTTACAACAAAGGAGAAGATGCTTCCATCGTCAATGAAGATCCATATCCACACGATGAAGAAGAAGCCGTAGAAACGCTCTCTCTATGCGATCTTCCAATTTACAGCGATGAATCAAATTGCGATGATTACTCCAAGCAGGATGATCAGAGCGGTTCGTTTGATAACGAAGATACATTCTTCGAGTTTTTCAGGGACGATTTCTCTGTTTCTAATTCAACTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATTCACAAAACAAAGGAAGAATTTCAACGGAGAAATCACACATGTTCAACGGTAAGAAATCGTCTGTAATTGATACTAGAGGTCGTGAGATCGCTTATACGAGAACGACGAGAGGAGGAGTTAAAAGCTTCGATCCATTTTCCATTTCATTGCCGAAGAATCCTGAGTACATCAAACGGAAGAGAAGATTGAAAATGAAGAAATACGACTTACCGACGGAGAGAGCGATGATACTGCAATCGTCACCGACGAAATCACGCTGGTTCTTGTTTCTGTTTGGTAGCGCGAGCTTCCCGAAGGAGATGGAACTGAGTGAAATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGCCGTCGGAGGAGAGGAAAGTGGCCACAGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTCTTAGGGCTATGGTAATAGGCTGCGGTGGCAGCAGCAATCAAAACGGCGCCGTAAAAGGTTCCTTCAGGCCCATTTCAGTCGTGTGA

Coding sequence (CDS)

ATGGTTATTGTAGCTAAGGAATCTTACAACAAAGGAGAAGATGCTTCCATCGTCAATGAAGATCCATATCCACACGATGAAGAAGAAGCCGTAGAAACGCTCTCTCTATGCGATCTTCCAATTTACAGCGATGAATCAAATTGCGATGATTACTCCAAGCAGGATGATCAGAGCGGTTCGTTTGATAACGAAGATACATTCTTCGAGTTTTTCAGGGACGATTTCTCTGTTTCTAATTCAACTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATTCACAAAACAAAGGAAGAATTTCAACGGAGAAATCACACATGTTCAACGGTAAGAAATCGTCTGTAATTGATACTAGAGGTCGTGAGATCGCTTATACGAGAACGACGAGAGGAGGAGTTAAAAGCTTCGATCCATTTTCCATTTCATTGCCGAAGAATCCTGAGTACATCAAACGGAAGAGAAGATTGAAAATGAAGAAATACGACTTACCGACGGAGAGAGCGATGATACTGCAATCGTCACCGACGAAATCACGCTGGTTCTTGTTTCTGTTTGGTAGCGCGAGCTTCCCGAAGGAGATGGAACTGAGTGAAATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGCCGTCGGAGGAGAGGAAAGTGGCCACAGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTCTTAGGGCTATGGTAATAGGCTGCGGTGGCAGCAGCAATCAAAACGGCGCCGTAAAAGGTTCCTTCAGGCCCATTTCAGTCGTGTGA

Protein sequence

MVIVAKESYNKGEDASIVNEDPYPHDEEEAVETLSLCDLPIYSDESNCDDYSKQDDQSGSFDNEDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPYKQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGGVKSFDPFSISLPKNPEYIKRKRRLKMKKYDLPTERAMILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRRSIQPAMFRPSEERKVATGRSSGKKTTVQALWKVLRAMVIGCGGSSNQNGAVKGSFRPISVV
Homology
[Close]
BLAST of Lsi02G017000 vs. TrEMBL
Match: A0A0A0KQQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495960 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.0e-72
Identity = 173/278 (62.23%), Postives = 198/278 (71.22%), Query Frame = 1 

Query: 1   MVIVAKESYNKGEDAS---IVNEDPYPH----------------DEEEAVETLSLCDLPI 60
           M++  KESYN+ ED     I+N+ P+PH                DEEE+VETLSLCDLPI
Sbjct: 1   MILAYKESYNRVEDTDSSIIINQHPHPHPHQHHEQQQEEEDEEEDEEESVETLSLCDLPI 60

Query: 61  YSDESNCDDYSKQDDQSGSFDN----EDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPY 120
           YSDESNCDDY     QS SFD+    +DTFFEFF  DFSV+NS+YSGSD+IIFCGKLIPY
Sbjct: 61  YSDESNCDDY-----QSASFDDHNQEDDTFFEFFSHDFSVANSSYSGSDNIIFCGKLIPY 120

Query: 121 KQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGGVKSFDPFSISLPKN-- 180
           KQP+DSQ K       S  F+GKKSSV D        TR+  GG+KSFDPFSISL  N  
Sbjct: 121 KQPSDSQIK------PSDNFSGKKSSVSD--------TRSGPGGIKSFDPFSISLTNNSI 180

Query: 181 PEYIKR-KRRLKMKKYDLPTERAMILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRR 240
           PEYIKR KR+ K++KY+LP ERAMILQSSP KSRWFLFLFGSA FPKEMELSEMR RQRR
Sbjct: 181 PEYIKRPKRKWKLQKYELPEERAMILQSSPMKSRWFLFLFGSARFPKEMELSEMRIRQRR 240

Query: 241 SIQ-PAMFRP-SEERKVATGRSSGKKTTV-QALWKVLR 250
           S++ P   +P SEERKV  GRS GKKTT  QAL K ++
Sbjct: 241 SMRLPEQRQPSSEERKVEKGRSKGKKTTTFQALCKHIK 259

[Close]
BLAST of Lsi02G017000 vs. TrEMBL
Match: B9HLP5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04290g PE=4 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 4.6e-20
Identity = 86/253 (33.99%), Postives = 126/253 (49.80%), Query Frame = 1 

Query: 18  VNEDPYPHDEEEAVETLSLCDLPIYSDESNCDDYSKQDDQSGSFDNEDTFFEFFRDDFSV 77
           V+++    D ++A ETLSLCDLP+    SN D +S++D   GS  ++D FFEFF +DF+ 
Sbjct: 13  VHDNSELQDFDDAAETLSLCDLPLNGYASNWDGFSREDQSLGSSFDQD-FFEFFSEDFTA 72

Query: 78  SNSTYSGSDDIIFCGKLI-------PYKQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGR 137
           SN      D+IIFCGKLI         K  N    K   +T+KS +F  K SS   +R  
Sbjct: 73  SN--IYPKDEIIFCGKLITCKGEAVAEKTQNLESTKKAKNTKKSFIFPWKSSSFNKSRA- 132

Query: 138 EIAYTRTTRGGVKSFDPFSISLPKNPEYIKRKRRLKMKKYDLPTERAMILQSSPTKSRWF 197
               T + +   KS       L +N  +  RK      +YD   ++  IL ++PTK RW+
Sbjct: 133 ----TSSKQLQEKSDKTLQEPLSENHGFATRKCD---DRYDFSMKKVSIL-ATPTKPRWY 192

Query: 198 LFLFGSASFPKEMELSEMRTRQRRSIQPAMFRPSEERKVATGRSSGKKTTVQALWKVLRA 257
              FG    P EMELS+++ RQ +     M +  +  + ++G   GK +     W +LR 
Sbjct: 193 FLAFGVGRLPMEMELSDIKMRQSKKSPSRMIQSEKVIETSSGNKRGKGS-----WSLLRV 248

Query: 258 MVIGCGGSSNQNG 264
           +   C  S N  G
Sbjct: 253 LGCPCPWSKNPKG 248

[Close]
BLAST of Lsi02G017000 vs. TrEMBL
Match: I1LD34_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.9e-20
Identity = 93/287 (32.40%), Postives = 140/287 (48.78%), Query Frame = 1 

Query: 3   IVAKESYNKGEDASIVNEDP----YPHDEEEAVETLSLCDLPIYSDESNC----DDYSKQ 62
           +  KE ++  +    VNE+     +  D  E  ETLSL DLPIYS  S       D+SK+
Sbjct: 1   MATKELFHSSDQEEAVNEESTLLQHEVDPYEEEETLSLSDLPIYSGASISARWGGDFSKE 60

Query: 63  DDQSGSFDNEDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPYKQPNDSQNKGRISTEKS 122
           D ++   D++D  FEFF ++F+ S++ Y+ +++IIFCGKLIP+K  N  +          
Sbjct: 61  DGKNFVDDDDDNLFEFFSEEFTASSTNYATAENIIFCGKLIPFKDINPPR---------- 120

Query: 123 HMFNGKKSSVIDTRGREIAYTRTTRGGVKSF--DPFSISLPKNPEYIKRKRRLKMKKYDL 182
               G +S++   +G      R+++G   SF    +S S+ K                  
Sbjct: 121 ----GDQSNINVQKG---ITKRSSKGSKSSFAASDYSSSVGKVS---------------- 180

Query: 183 PTERAMILQSSPTKSRWFLFLFGSA--SFPKEMELSEMRTRQ---RRSIQPAMFRPS--E 242
                  L  SPTKSRWFLF+FG +  S   EMEL ++R RQ   RR     M  P+  E
Sbjct: 181 -------LVRSPTKSRWFLFMFGMSKLSITTEMELKDIRNRQSRRRRGPTATMMIPAAPE 240

Query: 243 ERKVATGRSSGKKTTVQALWKVLR--AMVIGCGGSSN-QNGAVKGSF 270
             K        K+++ + +WK+ R  +MV+GC  S+   N  VK +F
Sbjct: 241 NGKEEVAAVKEKRSSCKGMWKMFRSISMVLGCHSSNKIANDVVKAAF 247

[Close]
BLAST of Lsi02G017000 vs. TrEMBL
Match: A0A0R0I3S4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G213000 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19
Identity = 90/273 (32.97%), Postives = 139/273 (50.92%), Query Frame = 1 

Query: 13  EDASIVNEDPYPHDEEEAVETLSLCDLPIYSDESNC----DDYSKQDDQSGSFDNEDTFF 72
           E+++++  +  P++EEE   TLSL DLPIYS  S       D+SK+D ++   D++D  F
Sbjct: 22  EESTLLQHEVDPYEEEE---TLSLSDLPIYSGASISARWGGDFSKEDGKNFVDDDDDNLF 81

Query: 73  EFFRDDFSVSNSTYSGSDDIIFCGKLIPYKQPNDSQNKGRISTEKSHMFNGKKSSVIDTR 132
           EFF ++F+ S++ Y+ +++IIFCGKLIP+K  N  +              G +S++   +
Sbjct: 82  EFFSEEFTASSTNYATAENIIFCGKLIPFKDINPPR--------------GDQSNINVQK 141

Query: 133 GREIAYTRTTRGGVKSF--DPFSISLPKNPEYIKRKRRLKMKKYDLPTERAMILQSSPTK 192
           G      R+++G   SF    +S S+ K                         L  SPTK
Sbjct: 142 G---ITKRSSKGSKSSFAASDYSSSVGKVS-----------------------LVRSPTK 201

Query: 193 SRWFLFLFGSA--SFPKEMELSEMRTRQ---RRSIQPAMFRPS--EERKVATGRSSGKKT 252
           SRWFLF+FG +  S   EMEL ++R RQ   RR     M  P+  E  K        K++
Sbjct: 202 SRWFLFMFGMSKLSITTEMELKDIRNRQSRRRRGPTATMMIPAAPENGKEEVAAVKEKRS 251

Query: 253 TVQALWKVLR--AMVIGCGGSSN-QNGAVKGSF 270
           + + +WK+ R  +MV+GC  S+   N  VK +F
Sbjct: 262 SCKGMWKMFRSISMVLGCHSSNKIANDVVKAAF 251

[Close]
BLAST of Lsi02G017000 vs. TrEMBL
Match: B9SUP5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714460 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.3e-19
Identity = 83/256 (32.42%), Postives = 132/256 (51.56%), Query Frame = 1 

Query: 23  YPHDEEEAVETLSLCDLPIYSDESNCD-DYSKQDDQSGSFDNEDTFFEFFRDDFSVSNST 82
           + +D+ +  + LSLCDL ++++ +  D D S ++DQS SFD +   FEFF +DF+ S   
Sbjct: 18  FNYDDGDYDDALSLCDLALHNNSNASDWDDSSKEDQSSSFDQD--LFEFFSEDFTASAYP 77

Query: 83  YSGSDDIIFCGKLIPYKQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGG 142
               D+IIFCGKLIPYK   + +    +    S    GK+S +   +    + +R+TR  
Sbjct: 78  ---KDNIIFCGKLIPYKGDKEEEQAHNLEKAISKPREGKRSRIFPWK--TFSSSRSTRS- 137

Query: 143 VKSFDPFSISLPKNPEYIKRKRRLKMKKYDLPTERAMILQSSPTKSRWFLFLFGSASFPK 202
            KS+     +    P+         MK+Y+  + + + L   P +SRW+LF FG   +P 
Sbjct: 138 -KSYT----TCKTFPDLASESNEYGMKRYNRVSMKKVSLLGGPARSRWYLFAFGVGRYPM 197

Query: 203 EMELSEMRTRQRR---------SIQPAMFRPSEERKVATGRSSGKKTTVQALWKVLRAMV 262
           EMELS+++TRQ +         S  P   +  + R+   GR  GK+   +  W +LR  +
Sbjct: 198 EMELSDIKTRQSKLTDSKMRQSSKAPGKSKADDGREKLDGR-GGKR--ARGWWSLLR--I 254

Query: 263 IGCGGSSNQNGAVKGS 269
           +GC G +  N  VK S
Sbjct: 258 LGCKG-NQANAMVKAS 254

[Close]
BLAST of Lsi02G017000 vs. NCBI nr
Match: gi|778708557|ref|XP_011656236.1| (PREDICTED: uncharacterized protein LOC105435687 [Cucumis sativus])

HSP 1 Score: 304.3 bits (778), Expect = 2.2e-79
Identity = 185/294 (62.93%), Postives = 212/294 (72.11%), Query Frame = 1 

Query: 1   MVIVAKESYNKGEDAS---IVNEDPYPH----------------DEEEAVETLSLCDLPI 60
           M++  KESYN+ ED     I+N+ P+PH                DEEE+VETLSLCDLPI
Sbjct: 1   MILAYKESYNRVEDTDSSIIINQHPHPHPHQHHEQQQEEEDEEEDEEESVETLSLCDLPI 60

Query: 61  YSDESNCDDYSKQDDQSGSFDN----EDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPY 120
           YSDESNCDDY     QS SFD+    +DTFFEFF  DFSV+NS+YSGSD+IIFCGKLIPY
Sbjct: 61  YSDESNCDDY-----QSASFDDHNQEDDTFFEFFSHDFSVANSSYSGSDNIIFCGKLIPY 120

Query: 121 KQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGGVKSFDPFSISLPKN-- 180
           KQP+DSQ K       S  F+GKKSSV DTR           GG+KSFDPFSISL  N  
Sbjct: 121 KQPSDSQIK------PSDNFSGKKSSVSDTRSGP--------GGIKSFDPFSISLTNNSI 180

Query: 181 PEYIKR-KRRLKMKKYDLPTERAMILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRR 240
           PEYIKR KR+ K++KY+LP ERAMILQSSP KSRWFLFLFGSA FPKEMELSEMR RQRR
Sbjct: 181 PEYIKRPKRKWKLQKYELPEERAMILQSSPMKSRWFLFLFGSARFPKEMELSEMRIRQRR 240

Query: 241 SIQ-PAMFRP-SEERKVATGRSSGKKTTV-QALWKVLRAMVIGCGGSSNQNGAV 266
           S++ P   +P SEERKV  GRS GKKTT  QAL KVLRA+VIGC  S+++NGA+
Sbjct: 241 SMRLPEQRQPSSEERKVEKGRSKGKKTTTFQALCKVLRALVIGCSSSNHRNGAL 275

[Close]
BLAST of Lsi02G017000 vs. NCBI nr
Match: gi|700196052|gb|KGN51229.1| (hypothetical protein Csa_5G495960 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 5.7e-72
Identity = 173/278 (62.23%), Postives = 198/278 (71.22%), Query Frame = 1 

Query: 1   MVIVAKESYNKGEDAS---IVNEDPYPH----------------DEEEAVETLSLCDLPI 60
           M++  KESYN+ ED     I+N+ P+PH                DEEE+VETLSLCDLPI
Sbjct: 1   MILAYKESYNRVEDTDSSIIINQHPHPHPHQHHEQQQEEEDEEEDEEESVETLSLCDLPI 60

Query: 61  YSDESNCDDYSKQDDQSGSFDN----EDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPY 120
           YSDESNCDDY     QS SFD+    +DTFFEFF  DFSV+NS+YSGSD+IIFCGKLIPY
Sbjct: 61  YSDESNCDDY-----QSASFDDHNQEDDTFFEFFSHDFSVANSSYSGSDNIIFCGKLIPY 120

Query: 121 KQPNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGGVKSFDPFSISLPKN-- 180
           KQP+DSQ K       S  F+GKKSSV D        TR+  GG+KSFDPFSISL  N  
Sbjct: 121 KQPSDSQIK------PSDNFSGKKSSVSD--------TRSGPGGIKSFDPFSISLTNNSI 180

Query: 181 PEYIKR-KRRLKMKKYDLPTERAMILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRR 240
           PEYIKR KR+ K++KY+LP ERAMILQSSP KSRWFLFLFGSA FPKEMELSEMR RQRR
Sbjct: 181 PEYIKRPKRKWKLQKYELPEERAMILQSSPMKSRWFLFLFGSARFPKEMELSEMRIRQRR 240

Query: 241 SIQ-PAMFRP-SEERKVATGRSSGKKTTV-QALWKVLR 250
           S++ P   +P SEERKV  GRS GKKTT  QAL K ++
Sbjct: 241 SMRLPEQRQPSSEERKVEKGRSKGKKTTTFQALCKHIK 259

[Close]
BLAST of Lsi02G017000 vs. NCBI nr
Match: gi|645255134|ref|XP_008233358.1| (PREDICTED: uncharacterized protein LOC103332400 [Prunus mume])

HSP 1 Score: 130.2 bits (326), Expect = 5.6e-27
Identity = 109/289 (37.72%), Postives = 147/289 (50.87%), Query Frame = 1 

Query: 3   IVAKESYNKGEDASIVNEDPYPHDEEEAVETLSLCDLPIYSDESNCDDYSKQDDQSGSFD 62
           +VA+E++          E     D  EA ETLSLCDLP +SD ++ DD SK+  QS SFD
Sbjct: 39  MVAQETHQNPTVLEEKTEQFQDQDPYEAEETLSLCDLPTHSDSAHWDDCSKEY-QSTSFD 98

Query: 63  N-EDTFFEFFRDDFSVSNSTYSGSDDIIFCGKLIPYKQPNDSQNKGRISTEKSHMFNGKK 122
           N ED FFEFF ++F+ S    SG D IIFCGKLIPYK+   S        EK+H  + + 
Sbjct: 99  NDEDNFFEFFSEEFTASTYPSSGKD-IIFCGKLIPYKEAPKS-----FEAEKTHHQDKEI 158

Query: 123 SSVIDTRG------REIAYTRTTRGG--------VKSFDPFSISLPKNPEYIKRKRRLKM 182
            S    R       R  ++ +T +          ++  DP S++   +    K  R+ ++
Sbjct: 159 GSTKRIRKGFFRSWRSCSFHKTIKSSNSKISKPALQGKDPRSMNTCLSFPTSKSYRKCEL 218

Query: 183 KKYDLPTERAMILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRRSIQPAMFRPSEE- 242
            K         IL S+P+KS+W+LF+FG A FP EMEL ++RTRQ R     MFR  +E 
Sbjct: 219 SKVS-------ILSSTPSKSKWYLFMFGMARFPTEMELRDIRTRQSRRSPSTMFRSCDEG 278

Query: 243 ------RKVATGRSSGKKTTVQALWKVLRAMVIGCGGSSNQNGAVKGSF 270
                 +K   GR S  K     LW +LRA  +GC   S  N  VK  F
Sbjct: 279 SDQMEGQKGNMGRKSSNK--ANGLWGLLRA--VGC-RISQPNAVVKAGF 308

[Close]
BLAST of Lsi02G017000 vs. NCBI nr
Match: gi|694406712|ref|XP_009378146.1| (PREDICTED: uncharacterized protein LOC103966674 [Pyrus x bretschneideri])

HSP 1 Score: 129.8 bits (325), Expect = 7.3e-27
Identity = 98/256 (38.28%), Postives = 135/256 (52.73%), Query Frame = 1 

Query: 25  HDEEEAVETLSLCDLPIYSDESNCDDYSKQDDQSGSFD-NEDTFFEFFRDDFSVSNSTYS 84
           HD  EA ETLSLCDLP  SD ++CDD+SK D QS SFD +ED FFEFF +DF+ S  TY 
Sbjct: 23  HDPYEAEETLSLCDLPTNSDSAHCDDFSK-DYQSSSFDRDEDNFFEFFSEDFTAS--TYP 82

Query: 85  GSDDIIFCGKLIPYKQ--PNDSQNKGRISTEKSHMFNGKKSSVIDTRGREIAYTRTTRGG 144
              DIIFCGKLIPY +  PN +  KG             KS    +  R + +++  +G 
Sbjct: 83  AEKDIIFCGKLIPYNKEAPNFAAEKGHQKI---------KSQETGSNARSVNFSK-KKGF 142

Query: 145 VKSF--DPF-SISLPKNPEYIKRKRRLKMKKY-DLPTERAMILQSSPTKSRWFLFLFGSA 204
            +S+   PF S++ P     I +        Y      +  IL  +P+KS+W++ +F  A
Sbjct: 143 FRSWRSSPFHSVTKPSKTAKISKPESPTPTSYRKCEVNKVSILSKTPSKSKWYVMMFQMA 202

Query: 205 SFPKEMELSEMRTRQRRSIQPAMFRPSEERKVATGRSSGKK-------TTVQALWKVLRA 264
            FP EMEL +++ RQ R     MFR  +E       + G K       +  + LW +LRA
Sbjct: 203 RFPSEMELKDIKNRQSRRSPSTMFRSFDEESDEMAGAKGNKGIKSDGNSRPRWLWGLLRA 262

Query: 265 MVIGCGGSSNQNGAVK 267
            V+ C GS + +  VK
Sbjct: 263 AVV-C-GSPHADAVVK 263

[Close]
BLAST of Lsi02G017000 vs. NCBI nr
Match: gi|764631747|ref|XP_011469678.1| (PREDICTED: uncharacterized protein LOC101301053 [Fragaria vesca subsp. vesca])

HSP 1 Score: 129.8 bits (325), Expect = 7.3e-27
Identity = 108/277 (38.99%), Postives = 145/277 (52.35%), Query Frame = 1 

Query: 20  EDPYPHDEEEAVETLSLCDLPIYSDESNCDDYSKQDDQSGSFD-NEDTFFEFFRDDFSVS 79
           +DPY     EA ETLSLCDLP YSD +N +D+SK D QS SFD +ED FFEFF ++F+ S
Sbjct: 25  DDPY-----EAEETLSLCDLPTYSDSANWNDFSK-DYQSSSFDRDEDNFFEFFSEEFTAS 84

Query: 80  NSTYS-GSDDIIFCGKLIPY-----------KQPNDSQNKGR----ISTEKSHMFN---- 139
             TYS G+ DIIFCGKLIPY           K+   +Q  G      ST+K  +F     
Sbjct: 85  --TYSTGNKDIIFCGKLIPYNKEAPYVAAAEKKTQKNQEPGNKNLNSSTKKWSLFRWRRL 144

Query: 140 -GKKSSVIDTRGREIAYTRTTRGGVKSFDPFSISLPKNPEYIKRKRRLKMKKYDLPTERA 199
            G K  V+ TR  +    R+           +IS P +  +         ++ D+P  + 
Sbjct: 145 RGSKHKVV-TRPSQCKEARSASA------TNTISFPASKSH---------RRCDVPLGKV 204

Query: 200 MILQSSPTKSRWFLFLFGSASFPKEMELSEMRTRQRRSIQPAMFRPSEERK---VATGRS 259
            IL S+ +KS+W+LF+FG A FP EMEL ++++RQ R     MF  + E     +  G  
Sbjct: 205 SILSSNRSKSKWYLFMFGMARFPTEMELRDIKSRQSRRSPSTMFGANSEASDELMGKGNK 264

Query: 260 --SGKKTTVQALWKVLRAMVIGCGGSSNQNGAVKGSF 270
             S      + LW +LRA  IGC  S + N  VK SF
Sbjct: 265 EISDSSNRAKGLWGLLRA--IGC-RSQHPNAVVKSSF 274

The following BLAST results are available for this feature:
BLAST of Lsi02G017000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi02G017000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQQ0_CUCSA4.0e-7262.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495960 PE=4 SV=1[more]
B9HLP5_POPTR4.6e-2033.99Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04290g PE=4 SV=2[more]
I1LD34_SOYBN7.9e-2032.40Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0R0I3S4_SOYBN1.0e-1932.97Uncharacterized protein OS=Glycine max GN=GLYMA_10G213000 PE=4 SV=1[more]
B9SUP5_RICCO1.3e-1932.42Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714460 PE=4 SV=1[more]
BLAST of Lsi02G017000 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi02G017000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708557|ref|XP_011656236.1|2.2e-7962.93PREDICTED: uncharacterized protein LOC105435687 [Cucumis sativus][more]
gi|700196052|gb|KGN51229.1|5.7e-7262.23hypothetical protein Csa_5G495960 [Cucumis sativus][more]
gi|645255134|ref|XP_008233358.1|5.6e-2737.72PREDICTED: uncharacterized protein LOC103332400 [Prunus mume][more]
gi|694406712|ref|XP_009378146.1|7.3e-2738.28PREDICTED: uncharacterized protein LOC103966674 [Pyrus x bretschneideri][more]
gi|764631747|ref|XP_011469678.1|7.3e-2738.99PREDICTED: uncharacterized protein LOC101301053 [Fragaria vesca subsp. vesca][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi02G017000.1Lsi02G017000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34130FAMILY NOT NAMEDcoord: 1..275
score: 3.0
NoneNo IPR availablePANTHERPTHR34130:SF3SUBFAMILY NOT NAMEDcoord: 1..275
score: 3.0