Cp4.1LG01g24280 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGTTGCTAAAGAATCTTACAGAGGAGAAGAAGATGCCTCCATCGATCTCTCAGATGATAGGTATCCACACGATGAAGAAGCGGAAGAAACTCTCTCGCTGTGCGACCTTCCAGGTTACAGCGATGAATCAAAATGCGATGATTACTCCAAGCAGGATCAGAGCGCTTCGTTCGACAACGAAGATACATTGTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTGATTCAGCATATTCTGGATCTGATAGCATAATCTTCTGCGGGAAACTGATTCCTTATAAACAGCCGTGCGATTCACAAAACAAAGGAAGAATCGCATCGGAGAAAATTTCCGGAAAGAATCGTCAATTTCGTACGAAATCACAATCGTTCGATGCGAGAAAATCGCCTACGATTGACGCAAGAGGTCGCGAGATCACTTATGCGAGAGCGAAGAGAGGAGTTAAAAACTTCGATTCGCTTTCCATTTCACTACCGAAGAATCCGGAGTACATCAAACGAAAGAGATGCTGTAAATTGAAGAAATACGACTTACAGGCGGAGAGAGCGATGATACTGCAATCGTCGCCGACGAAATCGCGTTGGTTCTTGTTTCTGTTTGGTAGCGCGAGGTTGCCGAAGGAGATGGAACTGAGTGATATGAGGACAAGGCAACGACGGAGCAGTCGGCCGGCAATGTTCCGGTCGCCGGAGGAGAGGAAAGTTGCAAGAGGAAGAAGTGGAAAGAAGACGACGGTTCATGAGTTGTGGAAGGTTCTCAAGGCTCTGGTAATGGGCTGCAGAAGCAATGATCAAAACGCCGCCGTAAAGGGTTCGTTCCGTCCATTCCAGTCTTCTGATGCTGGAAAGTCGATTTTGTAG ATGATAGTTGCTAAAGAATCTTACAGAGGAGAAGAAGATGCCTCCATCGATCTCTCAGATGATAGGTATCCACACGATGAAGAAGCGGAAGAAACTCTCTCGCTGTGCGACCTTCCAGGTTACAGCGATGAATCAAAATGCGATGATTACTCCAAGCAGGATCAGAGCGCTTCGTTCGACAACGAAGATACATTGTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTGATTCAGCATATTCTGGATCTGATAGCATAATCTTCTGCGGGAAACTGATTCCTTATAAACAGCCGTGCGATTCACAAAACAAAGGAAGAATCGCATCGGAGAAAATTTCCGGAAAGAATCGTCAATTTCGTACGAAATCACAATCGTTCGATGCGAGAAAATCGCCTACGATTGACGCAAGAGGTCGCGAGATCACTTATGCGAGAGCGAAGAGAGGAGTTAAAAACTTCGATTCGCTTTCCATTTCACTACCGAAGAATCCGGAGTACATCAAACGAAAGAGATGCTGTAAATTGAAGAAATACGACTTACAGGCGGAGAGAGCGATGATACTGCAATCGTCGCCGACGAAATCGCGTTGGTTCTTGTTTCTGTTTGGTAGCGCGAGGTTGCCGAAGGAGATGGAACTGAGTGATATGAGGACAAGGCAACGACGGAGCAGTCGGCCGGCAATGTTCCGGTCGCCGGAGGAGAGGAAAGTTGCAAGAGGAAGAAGTGGAAAGAAGACGACGGTTCATGAGTTGTGGAAGGTTCTCAAGGCTCTGGTAATGGGCTGCAGAAGCAATGATCAAAACGCCGCCGTAAAGGGTTCGTTCCGTCCATTCCAGTCTTCTGATGCTGGAAAGTCGATTTTGTAG ATGATAGTTGCTAAAGAATCTTACAGAGGAGAAGAAGATGCCTCCATCGATCTCTCAGATGATAGGTATCCACACGATGAAGAAGCGGAAGAAACTCTCTCGCTGTGCGACCTTCCAGGTTACAGCGATGAATCAAAATGCGATGATTACTCCAAGCAGGATCAGAGCGCTTCGTTCGACAACGAAGATACATTGTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTGATTCAGCATATTCTGGATCTGATAGCATAATCTTCTGCGGGAAACTGATTCCTTATAAACAGCCGTGCGATTCACAAAACAAAGGAAGAATCGCATCGGAGAAAATTTCCGGAAAGAATCGTCAATTTCGTACGAAATCACAATCGTTCGATGCGAGAAAATCGCCTACGATTGACGCAAGAGGTCGCGAGATCACTTATGCGAGAGCGAAGAGAGGAGTTAAAAACTTCGATTCGCTTTCCATTTCACTACCGAAGAATCCGGAGTACATCAAACGAAAGAGATGCTGTAAATTGAAGAAATACGACTTACAGGCGGAGAGAGCGATGATACTGCAATCGTCGCCGACGAAATCGCGTTGGTTCTTGTTTCTGTTTGGTAGCGCGAGGTTGCCGAAGGAGATGGAACTGAGTGATATGAGGACAAGGCAACGACGGAGCAGTCGGCCGGCAATGTTCCGGTCGCCGGAGGAGAGGAAAGTTGCAAGAGGAAGAAGTGGAAAGAAGACGACGGTTCATGAGTTGTGGAAGGTTCTCAAGGCTCTGGTAATGGGCTGCAGAAGCAATGATCAAAACGCCGCCGTAAAGGGTTCGTTCCGTCCATTCCAGTCTTCTGATGCTGGAAAGTCGATTTTGTAG MIVAKESYRGEEDASIDLSDDRYPHDEEAEETLSLCDLPGYSDESKCDDYSKQDQSASFDNEDTLFEFFSDDFSVSDSAYSGSDSIIFCGKLIPYKQPCDSQNKGRIASEKISGKNRQFRTKSQSFDARKSPTIDARGREITYARAKRGVKNFDSLSISLPKNPEYIKRKRCCKLKKYDLQAERAMILQSSPTKSRWFLFLFGSARLPKEMELSDMRTRQRRSSRPAMFRSPEERKVARGRSGKKTTVHELWKVLKALVMGCRSNDQNAAVKGSFRPFQSSDAGKSIL
BLAST of Cp4.1LG01g24280 vs. TrEMBL
Match: A0A0A0KQQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495960 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.2e-55 Identity = 155/280 (55.36%), Postives = 176/280 (62.86%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. TrEMBL
Match: B9SUP5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0714460 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 95/260 (36.54%), Postives = 140/260 (53.85%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. TrEMBL
Match: B9HU31_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22530g PE=4 SV=2) HSP 1 Score: 109.4 bits (272), Expect = 7.5e-21 Identity = 90/237 (37.97%), Postives = 126/237 (53.16%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. TrEMBL
Match: A0A061FUT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043091 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.8e-20 Identity = 92/261 (35.25%), Postives = 137/261 (52.49%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. TrEMBL
Match: F6HNI7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g03910 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 3.1e-19 Identity = 100/275 (36.36%), Postives = 136/275 (49.45%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. TAIR10
Match: AT4G30230.1 (AT4G30230.1 unknown protein) HSP 1 Score: 53.5 bits (127), Expect = 2.5e-07 Identity = 68/250 (27.20%), Postives = 103/250 (41.20%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. NCBI nr
Match: gi|778708557|ref|XP_011656236.1| (PREDICTED: uncharacterized protein LOC105435687 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60 Identity = 168/303 (55.45%), Postives = 193/303 (63.70%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. NCBI nr
Match: gi|700196052|gb|KGN51229.1| (hypothetical protein Csa_5G495960 [Cucumis sativus]) HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55 Identity = 155/280 (55.36%), Postives = 176/280 (62.86%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. NCBI nr
Match: gi|645255134|ref|XP_008233358.1| (PREDICTED: uncharacterized protein LOC103332400 [Prunus mume]) HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31 Identity = 114/290 (39.31%), Postives = 161/290 (55.52%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. NCBI nr
Match: gi|694410701|ref|XP_009333750.1| (PREDICTED: uncharacterized protein LOC103926661 [Pyrus x bretschneideri]) HSP 1 Score: 138.3 bits (347), Expect = 2.2e-29 Identity = 102/271 (37.64%), Postives = 147/271 (54.24%), Query Frame = 1
BLAST of Cp4.1LG01g24280 vs. NCBI nr
Match: gi|764631747|ref|XP_011469678.1| (PREDICTED: uncharacterized protein LOC101301053 [Fragaria vesca subsp. vesca]) HSP 1 Score: 131.7 bits (330), Expect = 2.0e-27 Identity = 107/290 (36.90%), Postives = 151/290 (52.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |