ClCG09G020480 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTATTATGGCGAAAGGATCTTACAACAAAGGAGAAGATACCTCCATCATCGTCAATGAAGATCCATATCCAGGCGATGAAGAAGAAGCCGCAGAAACGATCTCTCTATGCGACCTTCCAATTTACAGCGATGAATCAAATTGCGACGATTACTCCAAGCAGGATGATCAGAGCGGTTCATTTGATAACGAAGATACATTCTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTAATTCAGCTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATCCACAAAACAAAGGAAGAATTGCATCGGAGAAAATTTCGGAAAAGAATTGCCAAATTCGTACGAAATCACACTCGTTCAATGGTAAGAAATCGTCTGTTATTGATACTAGAGGACGTGAGATCGCTTATACGAGAACGACGAGAGGAGAAGTTAAAAGTTTCGATCCATTTTCCATTTCGTTGCCGAAGAATCCTGAGTACATAAAACGGAAGAGAAGATTGAGATTGGAGAAGTACGACTTACCGGCGGAGAGAGCGATGATACTGCAATCGTCGCGAACGAAATCGCGGTGGTTCTTGTTTCTGTTTGGTAGTGCGAGCTTTCCAAAGGAGATGGAACTGAGTGAGATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGGCGTCGGAGGAGAGGAAAGTGGCCACCGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTGTTAGGGCTATGGTAATGAGCTGCAGTAGCAGCAGCAATGAAAACGGCGCCGTAAAGGGTTCCTACAGGCCAATCTCGGTCGTGTGA ATGGTTATTATGGCGAAAGGATCTTACAACAAAGGAGAAGATACCTCCATCATCGTCAATGAAGATCCATATCCAGGCGATGAAGAAGAAGCCGCAGAAACGATCTCTCTATGCGACCTTCCAATTTACAGCGATGAATCAAATTGCGACGATTACTCCAAGCAGGATGATCAGAGCGGTTCATTTGATAACGAAGATACATTCTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTAATTCAGCTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATCCACAAAACAAAGGAAGAATTGCATCGGAGAAAATTTCGGAAAAGAATTGCCAAATTCGTACGAAATCACACTCGTTCAATGGTAAGAAATCGTCTGTTATTGATACTAGAGGACGTGAGATCGCTTATACGAGAACGACGAGAGGAGAAGTTAAAAGTTTCGATCCATTTTCCATTTCGTTGCCGAAGAATCCTGAGTACATAAAACGGAAGAGAAGATTGAGATTGGAGAAGTACGACTTACCGGCGGAGAGAGCGATGATACTGCAATCGTCGCGAACGAAATCGCGGTGGTTCTTGTTTCTGTTTGGTAGTGCGAGCTTTCCAAAGGAGATGGAACTGAGTGAGATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGGCGTCGGAGGAGAGGAAAGTGGCCACCGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTGTTAGGGCTATGGTAATGAGCTGCAGTAGCAGCAGCAATGAAAACGGCGCCGTAAAGGGTTCCTACAGGCCAATCTCGGTCGTGTGA ATGGTTATTATGGCGAAAGGATCTTACAACAAAGGAGAAGATACCTCCATCATCGTCAATGAAGATCCATATCCAGGCGATGAAGAAGAAGCCGCAGAAACGATCTCTCTATGCGACCTTCCAATTTACAGCGATGAATCAAATTGCGACGATTACTCCAAGCAGGATGATCAGAGCGGTTCATTTGATAACGAAGATACATTCTTCGAGTTTTTCAGCGACGATTTCTCTGTTTCTAATTCAGCTTATTCAGGATCCGATGACATAATCTTCTGCGGGAAATTGATTCCCTACAAACAGCCAAATGATCCACAAAACAAAGGAAGAATTGCATCGGAGAAAATTTCGGAAAAGAATTGCCAAATTCGTACGAAATCACACTCGTTCAATGGTAAGAAATCGTCTGTTATTGATACTAGAGGACGTGAGATCGCTTATACGAGAACGACGAGAGGAGAAGTTAAAAGTTTCGATCCATTTTCCATTTCGTTGCCGAAGAATCCTGAGTACATAAAACGGAAGAGAAGATTGAGATTGGAGAAGTACGACTTACCGGCGGAGAGAGCGATGATACTGCAATCGTCGCGAACGAAATCGCGGTGGTTCTTGTTTCTGTTTGGTAGTGCGAGCTTTCCAAAGGAGATGGAACTGAGTGAGATGAGGACAAGGCAACGGCGGAGCATTCAGCCGGCGATGTTCCGGGCGTCGGAGGAGAGGAAAGTGGCCACCGGAAGAAGCAGTGGGAAGAAGACGACGGTTCAAGCGCTATGGAAGGTTGTTAGGGCTATGGTAATGAGCTGCAGTAGCAGCAGCAATGAAAACGGCGCCGTAAAGGGTTCCTACAGGCCAATCTCGGTCGTGTGA MVIMAKGSYNKGEDTSIIVNEDPYPGDEEEAAETISLCDLPIYSDESNCDDYSKQDDQSGSFDNEDTFFEFFSDDFSVSNSAYSGSDDIIFCGKLIPYKQPNDPQNKGRIASEKISEKNCQIRTKSHSFNGKKSSVIDTRGREIAYTRTTRGEVKSFDPFSISLPKNPEYIKRKRRLRLEKYDLPAERAMILQSSRTKSRWFLFLFGSASFPKEMELSEMRTRQRRSIQPAMFRASEERKVATGRSSGKKTTVQALWKVVRAMVMSCSSSSNENGAVKGSYRPISVV
BLAST of ClCG09G020480 vs. TrEMBL
Match: A0A0A0KQQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G495960 PE=4 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71 Identity = 169/289 (58.48%), Postives = 195/289 (67.47%), Query Frame = 1
BLAST of ClCG09G020480 vs. TrEMBL
Match: B9HLP5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s04290g PE=4 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 82/252 (32.54%), Postives = 126/252 (50.00%), Query Frame = 1
BLAST of ClCG09G020480 vs. TrEMBL
Match: B9HU31_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s22530g PE=4 SV=2) HSP 1 Score: 118.6 bits (296), Expect = 1.2e-23 Identity = 85/242 (35.12%), Postives = 126/242 (52.07%), Query Frame = 1
BLAST of ClCG09G020480 vs. TrEMBL
Match: A0A059ACZ9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01114 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 5.2e-22 Identity = 79/245 (32.24%), Postives = 122/245 (49.80%), Query Frame = 1
BLAST of ClCG09G020480 vs. TrEMBL
Match: A0A061FUT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_043091 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-21 Identity = 86/289 (29.76%), Postives = 140/289 (48.44%), Query Frame = 1
BLAST of ClCG09G020480 vs. NCBI nr
Match: gi|778708557|ref|XP_011656236.1| (PREDICTED: uncharacterized protein LOC105435687 [Cucumis sativus]) HSP 1 Score: 300.4 bits (768), Expect = 3.3e-78 Identity = 180/305 (59.02%), Postives = 210/305 (68.85%), Query Frame = 1
BLAST of ClCG09G020480 vs. NCBI nr
Match: gi|700196052|gb|KGN51229.1| (hypothetical protein Csa_5G495960 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 2.3e-71 Identity = 169/289 (58.48%), Postives = 195/289 (67.47%), Query Frame = 1
BLAST of ClCG09G020480 vs. NCBI nr
Match: gi|764631747|ref|XP_011469678.1| (PREDICTED: uncharacterized protein LOC101301053 [Fragaria vesca subsp. vesca]) HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31 Identity = 101/267 (37.83%), Postives = 147/267 (55.06%), Query Frame = 1
BLAST of ClCG09G020480 vs. NCBI nr
Match: gi|694410701|ref|XP_009333750.1| (PREDICTED: uncharacterized protein LOC103926661 [Pyrus x bretschneideri]) HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30 Identity = 95/257 (36.96%), Postives = 139/257 (54.09%), Query Frame = 1
BLAST of ClCG09G020480 vs. NCBI nr
Match: gi|694406712|ref|XP_009378146.1| (PREDICTED: uncharacterized protein LOC103966674 [Pyrus x bretschneideri]) HSP 1 Score: 137.9 bits (346), Expect = 2.8e-29 Identity = 97/268 (36.19%), Postives = 132/268 (49.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |