Lsi02G011500 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G011500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	chr02 : 13629800 .. 13630291 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTTGTGACAGAGGCAATCAAAGGCAAAGCAGTTGAAGTATACCATGGAGATGAGATGTGTCAAGAGAAATCCAAAGAATTACTGAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATAGAAGAATGTGGGATTGTAAGAGAAACAGGGTTTGTTTGGTTGAAGCAGAAAAAAAGCATAACCCACAAGTTTGAGAAGATTGGGAAGCTTACTTCTTATGCCACTGAAGTAACAGCCATTGTAGAGAAAAACAAAATCAAGAAACTCACTGGTGTTAAGACCAAGGAGCTTCTGCTTTGGGTTACACTGAGTGATATCTATGTTGATGATCCAGCCACTGGAAAAATTACCTTTCAGACACCAGCAGGGCTATCTAGGACTTTTCCAGTCTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAGGAACAAGGGGTGGGAACTGTTGAAGTCAAAGAGGTCTAG

mRNA sequence

ATGTCTGTTGTGACAGAGGCAATCAAAGGCAAAGCAGTTGAAGTATACCATGGAGATGAGATGTGTCAAGAGAAATCCAAAGAATTACTGAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATAGAAGAATGTGGGATTGTAAGAGAAACAGGGTTTGTTTGGTTGAAGCAGAAAAAAAGCATAACCCACAAGTTTGAGAAGATTGGGAAGCTTACTTCTTATGCCACTGAAGTAACAGCCATTGTAGAGAAAAACAAAATCAAGAAACTCACTGGTGTTAAGACCAAGGAGCTTCTGCTTTGGGTTACACTGAGTGATATCTATGTTGATGATCCAGCCACTGGAAAAATTACCTTTCAGACACCAGCAGGGCTATCTAGGACTTTTCCAGTCTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAGGAACAAGGGGTGGGAACTGTTGAAGTCAAAGAGGTCTAG

Coding sequence (CDS)

ATGTCTGTTGTGACAGAGGCAATCAAAGGCAAAGCAGTTGAAGTATACCATGGAGATGAGATGTGTCAAGAGAAATCCAAAGAATTACTGAAAGAAATAGGGCTTCCAAATGGGCTTTTGCCATTGAAAGACATAGAAGAATGTGGGATTGTAAGAGAAACAGGGTTTGTTTGGTTGAAGCAGAAAAAAAGCATAACCCACAAGTTTGAGAAGATTGGGAAGCTTACTTCTTATGCCACTGAAGTAACAGCCATTGTAGAGAAAAACAAAATCAAGAAACTCACTGGTGTTAAGACCAAGGAGCTTCTGCTTTGGGTTACACTGAGTGATATCTATGTTGATGATCCAGCCACTGGAAAAATTACCTTTCAGACACCAGCAGGGCTATCTAGGACTTTTCCAGTCTCAGCTTTTCAGGTTGAAGAGCCAGTAAAGGCAGTGAGTGAGAAGAAGGAACAAGGGGTGGGAACTGTTGAAGTCAAAGAGGTCTAG

Protein sequence

MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLKQKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGKITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV

Homology

[Close]

BLAST of Lsi02G011500 vs. TrEMBL
Match: A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-75
Identity = 148/163 (90.80%), Postives = 153/163 (93.87%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MSVVTE IKGK  EVYHGDE+CQEKSKELLKEIGLPNGLLPLKDIEECGI+RETGFVWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKFEKIGKL SYATEVTA VEKNKIKKLTGVKTKELL+WV+LSDIYVDDP TGK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAFQVEEPVKAVSEKKEQ V TVEVKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 196

[Close]

BLAST of Lsi02G011500 vs. TrEMBL
Match: A0A067JKM9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23201 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.1e-64
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+VTE IK KA EVYHGDE+CQ+K+K LL E+GLPNGLLPL DI ECGIVRETGFVWLK
Sbjct: 1   MSLVTEEIKAKA-EVYHGDEICQDKTKLLLAEVGLPNGLLPLHDILECGIVRETGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKSITHKFEKIG+LT+YA EVTA+VEK KIKKLTGVKTKELLLWVTLSDIY+DDP TGK
Sbjct: 61  QKKSITHKFEKIGRLTTYAPEVTAVVEKGKIKKLTGVKTKELLLWVTLSDIYLDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAF+VEEP K V E+ ++    VEVK+V
Sbjct: 121 ITFQTPAGLYRTFPVSAFEVEEPKKDVKEEVKEVKAAVEVKDV 162

[Close]

BLAST of Lsi02G011500 vs. TrEMBL
Match: A0A0D2R658_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G235700 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.4e-63
Identity = 123/154 (79.87%), Postives = 141/154 (91.56%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+VTE IKG A E+YHGDE+CQEKSK LL+E+G+P+GLLPLKDIEECG V++TGFVWLK
Sbjct: 1   MSLVTEEIKGSASEIYHGDEICQEKSKFLLEEMGMPSGLLPLKDIEECGYVKDTGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKSITHKF+KIGKL SYATEVTA+VEKNKIKKLTGVKTKELL+W+TLSDIYVDDP TG 
Sbjct: 61  QKKSITHKFDKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLVWITLSDIYVDDPPTGN 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVK-AVSEKKEQ 154
           ITF+TPAGL RTFPVSAF+VE  +K AV +KKE+
Sbjct: 121 ITFKTPAGLFRTFPVSAFEVEGELKGAVKDKKEE 154

[Close]

BLAST of Lsi02G011500 vs. TrEMBL
Match: A0A0A0LYR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555620 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-62
Identity = 121/147 (82.31%), Postives = 136/147 (92.52%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+V E +KGKA EVYHGDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETGFVW+K
Sbjct: 1   MSIVREEMKGKA-EVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKFEKIGKL SYA EVTAIVEKNKIKKLTGVKTKELL+WV+LSDIYVD+P +GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAV 148
           I+FQTP GL RTFPVSAFQV++ VK V
Sbjct: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]

BLAST of Lsi02G011500 vs. TrEMBL
Match: V4T5V3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002714mg PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 2.9e-62
Identity = 123/155 (79.35%), Postives = 137/155 (88.39%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+VTE I+ KA E+Y GDE+CQEKSK LL EIGLPNGLLPL DIEECG V+ETGFVWLK
Sbjct: 1   MSLVTEEIRAKA-ELYRGDEICQEKSKFLLTEIGLPNGLLPLHDIEECGYVKETGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKSITHKFEKIGKL SYATEVTA+VE N+IKKLTGVK+KELL+W+T+SDIYVDDP TGK
Sbjct: 61  QKKSITHKFEKIGKLVSYATEVTAVVEPNRIKKLTGVKSKELLIWITMSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGV 156
           ITFQTPAGLSR+FPVSAFQVEEP K   + K + V
Sbjct: 121 ITFQTPAGLSRSFPVSAFQVEEPTKNAKDSKSKDV 154

[Close]

BLAST of Lsi02G011500 vs. TAIR10
Match: AT1G56580.1 (AT1G56580.1 Protein of unknown function, DUF538)

HSP 1 Score: 200.3 bits (508), Expect = 9.2e-52
Identity = 107/163 (65.64%), Postives = 127/163 (77.91%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           M +VT+ ++ +A E Y GDE+C+EK+KE LKE+ +PNGLLPLKDIEE G  RETG VWLK
Sbjct: 1   MGLVTDEVRARA-EKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDP-ATG 120
           QKKSITHKFE IGKL SYATEV A VE  KIKKLTGVK KELL+WVTL+++ ++ P ++G
Sbjct: 61  QKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSG 120

Query: 121 KITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKE 163
           KI F+TP GLSRTFPVSAF V E  K  +EK     GT EVKE
Sbjct: 121 KINFRTPTGLSRTFPVSAFVVPEVEKPATEKNN---GTTEVKE 159

[Close]

BLAST of Lsi02G011500 vs. TAIR10
Match: AT1G09310.1 (AT1G09310.1 Protein of unknown function, DUF538)

HSP 1 Score: 191.8 bits (486), Expect = 3.3e-49
Identity = 107/167 (64.07%), Postives = 126/167 (75.45%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           M +VTE ++ KA E+Y GDE+C+EK+K  LKEI +PNGLLPLKDIEE G  RE+G VWLK
Sbjct: 1   MGLVTEEVRAKA-EMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKSITHKF +I KL SY TEVTAIVE  KIKKLTGVK KELL+WVT+++IY ++P T K
Sbjct: 61  QKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-K 120

Query: 121 ITFQTPAGLSRTFPVSAFQV-EEPVKAVSEK----KEQGVGTVEVKE 163
           ITF+TP  LSRTFPV+AF V EEP K    K    KE+     E KE
Sbjct: 121 ITFKTPTTLSRTFPVTAFIVPEEPAKEEPAKEEPAKEKSSEATEAKE 165

[Close]

BLAST of Lsi02G011500 vs. TAIR10
Match: AT5G46230.1 (AT5G46230.1 Protein of unknown function, DUF538)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-33
Identity = 63/138 (45.65%), Postives = 101/138 (73.19%), Query Frame = 1


Query: 5   TEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLKQKKS 64
           T++ + +  E+ +G+  C++K+KE+L  + LP GLLPL ++ E G  + TG+VW+K K  
Sbjct: 6   TKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNK 65

Query: 65  ITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGKITFQ 124
           + H+F+ IG+  SY +EVTAI+E  ++ +LTG+K+KE+L+WVT+S+I+V+     +ITF 
Sbjct: 66  VQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQITFA 125

Query: 125 TPAGLSRTFPVSAFQVEE 143
            P GLSRTFPV+AF+ +E
Sbjct: 126 NPTGLSRTFPVTAFEEDE 143

[Close]

BLAST of Lsi02G011500 vs. TAIR10
Match: AT4G24130.1 (AT4G24130.1 Protein of unknown function, DUF538)

HSP 1 Score: 132.5 bits (332), Expect = 2.4e-31
Identity = 63/140 (45.00%), Postives = 94/140 (67.14%), Query Frame = 1


Query: 3   VVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLKQK 62
           VV    + +  E+ +G E C ++S ELL+E+G P G++PLK++ ECG VR TG+VW+KQ 
Sbjct: 6   VVVVGGEREGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQD 65

Query: 63  KSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGKIT 122
               H FE      SY  EVTA V+K  +KK+TGVK+K++ LWV + ++ +++P + KI 
Sbjct: 66  TPYEHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIY 125

Query: 123 FQTPAGLSRTFPVSAFQVEE 143
           F+TP G+ R+FPV+ F  EE
Sbjct: 126 FKTPMGIGRSFPVTGFMDEE 145

[Close]

BLAST of Lsi02G011500 vs. TAIR10
Match: AT5G49600.1 (AT5G49600.1 Protein of unknown function, DUF538)

HSP 1 Score: 127.9 bits (320), Expect = 5.8e-30
Identity = 72/148 (48.65%), Postives = 100/148 (67.57%), Query Frame = 1


Query: 3   VVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLKQK 62
           +VTEA+K KA EVYHGD+ C+EK   LL EIGLPN LL  K+I+ECG V++TGFVWLK K
Sbjct: 1   MVTEAMKAKA-EVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHK 60

Query: 63  KSITH----------KFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIY 122
           +              +F+ +  +  +  EVTA  E N+IKKLTGVK KE ++W++L +I 
Sbjct: 61  EKKKEDQKRRYQDLLRFDNV--VVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQ 120

Query: 123 VDDPATGKITFQTPAG-LSRTFPVSAFQ 140
           V + ++G ITF+T  G LS++ P+S F+
Sbjct: 121 V-NRSSGLITFKTEVGLLSKSLPLSVFE 144

[Close]

BLAST of Lsi02G011500 vs. NCBI nr
Match: gi|659128666|ref|XP_008464314.1| (PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo])

HSP 1 Score: 292.7 bits (748), Expect = 3.9e-76
Identity = 149/163 (91.41%), Postives = 153/163 (93.87%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MSVVTE IKGK  EVYHGDE+CQEKSKELLKEIGLPNGLLPLKDIEECGI+RETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKFEKIGKL SYATEVTA VEKNKIKKLTGVKTKELLLWV+LSDIYVDDP TGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAFQVEEPVKA SEKKEQ VGTVEVKE+
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]

BLAST of Lsi02G011500 vs. NCBI nr
Match: gi|700209917|gb|KGN65013.1| (hypothetical protein Csa_1G181260 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75
Identity = 148/163 (90.80%), Postives = 153/163 (93.87%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MSVVTE IKGK  EVYHGDE+CQEKSKELLKEIGLPNGLLPLKDIEECGI+RETGFVWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKFEKIGKL SYATEVTA VEKNKIKKLTGVKTKELL+WV+LSDIYVDDP TGK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAFQVEEPVKAVSEKKEQ V TVEVKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 196

[Close]

BLAST of Lsi02G011500 vs. NCBI nr
Match: gi|778659689|ref|XP_004139521.2| (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.9e-75
Identity = 148/163 (90.80%), Postives = 153/163 (93.87%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MSVVTE IKGK  EVYHGDE+CQEKSKELLKEIGLPNGLLPLKDIEECGI+RETGFVWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKFEKIGKL SYATEVTA VEKNKIKKLTGVKTKELL+WV+LSDIYVDDP TGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAFQVEEPVKAVSEKKEQ V TVEVKE+
Sbjct: 121 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 163

[Close]

BLAST of Lsi02G011500 vs. NCBI nr
Match: gi|1009116603|ref|XP_015874863.1| (PREDICTED: uncharacterized protein LOC107411730 [Ziziphus jujuba])

HSP 1 Score: 254.6 bits (649), Expect = 1.2e-64
Identity = 131/165 (79.39%), Postives = 148/165 (89.70%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+VTE  K KA E+YHGD++CQEKSK LLKEIGLPNGLLPLKD+EECG V+ETGFVW+K
Sbjct: 1   MSLVTEENKAKADELYHGDDLCQEKSKLLLKEIGLPNGLLPLKDMEECGYVKETGFVWMK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKS THKF+KIGKL SYA EVTA VE+NKIKKLTGVKTKELL+W+TLSDIYVDDP TGK
Sbjct: 61  QKKSHTHKFDKIGKLVSYAPEVTAYVEQNKIKKLTGVKTKELLVWITLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKE-QGV-GTVEVKEV 164
           ITF+TP+GLSR+FPVSAF+VEEPVK V E +E +GV G VEVKEV
Sbjct: 121 ITFKTPSGLSRSFPVSAFEVEEPVKDVKENQEVKGVSGAVEVKEV 165

[Close]

BLAST of Lsi02G011500 vs. NCBI nr
Match: gi|802755377|ref|XP_012088865.1| (PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas])

HSP 1 Score: 252.7 bits (644), Expect = 4.4e-64
Identity = 130/163 (79.75%), Postives = 144/163 (88.34%), Query Frame = 1


Query: 1   MSVVTEAIKGKAVEVYHGDEMCQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGFVWLK 60
           MS+VTE IK KA EVYHGDE+CQ+K+K LL E+GLPNGLLPL DI ECGIVRETGFVWLK
Sbjct: 1   MSLVTEEIKAKA-EVYHGDEICQDKTKLLLAEVGLPNGLLPLHDILECGIVRETGFVWLK 60

Query: 61  QKKSITHKFEKIGKLTSYATEVTAIVEKNKIKKLTGVKTKELLLWVTLSDIYVDDPATGK 120
           QKKSITHKFEKIG+LT+YA EVTA+VEK KIKKLTGVKTKELLLWVTLSDIY+DDP TGK
Sbjct: 61  QKKSITHKFEKIGRLTTYAPEVTAVVEKGKIKKLTGVKTKELLLWVTLSDIYLDDPPTGK 120

Query: 121 ITFQTPAGLSRTFPVSAFQVEEPVKAVSEKKEQGVGTVEVKEV 164
           ITFQTPAGL RTFPVSAF+VEEP K V E+ ++    VEVK+V
Sbjct: 121 ITFQTPAGLYRTFPVSAFEVEEPKKDVKEEVKEVKAAVEVKDV 162

The following BLAST results are available for this feature:

BLAST of Lsi02G011500 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi02G011500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTC9_CUCSA	1.3e-75	90.80	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181260 PE=4 SV=1	[more]
A0A067JKM9_JATCU	3.1e-64	79.75	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23201 PE=4 SV=1	[more]
A0A0D2R658_GOSRA	3.4e-63	79.87	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G235700 PE=4 SV=1	[more]
A0A0A0LYR3_CUCSA	2.2e-62	82.31	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G555620 PE=4 SV=1	[more]
V4T5V3_9ROSI	2.9e-62	79.35	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002714mg PE=4 SV=1	[more]

BLAST of Lsi02G011500 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56580.1	9.2e-52	65.64	Protein of unknown function, DUF538	[more]
AT1G09310.1	3.3e-49	64.07	Protein of unknown function, DUF538	[more]
AT5G46230.1	1.1e-33	45.65	Protein of unknown function, DUF538	[more]
AT4G24130.1	2.4e-31	45.00	Protein of unknown function, DUF538	[more]
AT5G49600.1	5.8e-30	48.65	Protein of unknown function, DUF538	[more]

BLAST of Lsi02G011500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128666\|ref\|XP_008464314.1\|	3.9e-76	91.41	PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo]	[more]
gi\|700209917\|gb\|KGN65013.1\|	1.9e-75	90.80	hypothetical protein Csa_1G181260 [Cucumis sativus]	[more]
gi\|778659689\|ref\|XP_004139521.2\|	1.9e-75	90.80	PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus]	[more]
gi\|1009116603\|ref\|XP_015874863.1\|	1.2e-64	79.39	PREDICTED: uncharacterized protein LOC107411730 [Ziziphus jujuba]	[more]
gi\|802755377\|ref\|XP_012088865.1\|	4.4e-64	79.75	PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G011500.1	Lsi02G011500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	GENE3D	G3DSA:2.30.240.10		coord: 11..142 score: 5.9
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 27..139 score: 2.8
IPR007493	Protein of unknown function DUF538	unknown	SSF141562	At5g01610-like	coord: 11..143 score: 4.84
None	No IPR available	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 1..142 score: 1.4
None	No IPR available	PANTHER	PTHR31676:SF10	SUBFAMILY NOT NAMED	coord: 1..142 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G011500	Csa1G181260	Cucumber (Chinese Long) v2	culsiB032
Lsi02G011500	CSPI01G15540	Wild cucumber (PI 183967)	cpilsiB033
Lsi02G011500	Cucsa.180700	Cucumber (Gy14) v1	cgylsiB302
Lsi02G011500	CmaCh10G011660	Cucurbita maxima (Rimu)	cmalsiB055
Lsi02G011500	CmoCh10G012440	Cucurbita moschata (Rifu)	cmolsiB043
Lsi02G011500	Cla010988	Watermelon (97103) v1	lsiwmB203
Lsi02G011500	MELO3C026103	Melon (DHL92) v3.5.1	lsimeB176
Lsi02G011500	ClCG01G011130	Watermelon (Charleston Gray)	lsiwcgB174
Lsi02G011500	MELO3C026103.2	Melon (DHL92) v3.6.1	lsimedB184
Lsi02G011500	Cla97C01G010840	Watermelon (97103) v2	lsiwmbB159
Lsi02G011500	Cp4.1LG18g00130	Cucurbita pepo (Zucchini)	cpelsiB290
Lsi02G011500	CsGy1G015250	Cucumber (Gy14) v2	cgyblsiB029
Lsi02G011500	Carg27423	Silver-seed gourd	carlsiB680
Lsi02G011500	CsaV3_1G015670	Cucumber (Chinese Long) v3	cuclsiB033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G011500	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G011500	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G011500	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G011500	Cucurbita moschata (Rifu)	cmolsiB359
Lsi02G011500	Cucurbita pepo (Zucchini)	cpelsiB027
Lsi02G011500	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G011500	Wild cucumber (PI 183967)	cpilsiB038
Lsi02G011500	Cucumber (Chinese Long) v2	culsiB037
Lsi02G011500	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G011500	Watermelon (97103) v1	lsiwmB205
Lsi02G011500	Cucumber (Gy14) v2	cgyblsiB038
Lsi02G011500	Silver-seed gourd	carlsiB046
Lsi02G011500	Cucumber (Chinese Long) v3	cuclsiB044
Lsi02G011500	Watermelon (97103) v2	lsiwmbB153
Lsi02G011500	Wax gourd	lsiwgoB257