Carg27423 (gene) Silver-seed gourd

Overview
NameCarg27423
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtein of unknown function, DUF538
LocationCucurbita_argyrosperma_scaffold_413 : 167872 .. 168360 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATAGAAGAATGTGGGATCGTGAGAGAAACAGGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCGTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCGGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

mRNA sequence

ATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATAGAAGAATGTGGGATCGTGAGAGAAACAGGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCGTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCGGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

Coding sequence (CDS)

ATGTCTGTAGCGACGGAGGAAATCAAAGCCAAAGGAGCCGAAGTCTACAAAGGAGACGAGATTTGCCAAGAGAAATCCAAGGAATTGCTGAAGGAAATCGGTCTTCCAAATGGGCTTCTGCCATTGAAGGACATAGAAGAATGTGGGATCGTGAGAGAAACAGGGTATGTGTGGCTGAAGCAGAGGAAGAACACGACCCACAAGTTCGAGAAGATCGGGAAGCTGGTGTCGTACGCGACGGAGGTCACGGCGGTTGTGGAGAAGAACAAGATCAAGAAACTCACCGGAGTTAAGACGAAGGAGCTTCTGATTTGGGTGAGTTTGAGTGATATCTATGTGGATGATCCACCCACCGGAAAGATCACGTTTCAGACTCCGGCGGGACTGTTTAGGACTTTTCCGGTGTCGGCGTTTCAGGTTGAAGAGCCGTTGAAGCAGGTGAGTGAAAAGGAACATGGTGTGGGCGCTGTCGGAGTCAAGGAGGTCTGA

Protein sequence

MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Homology
[Close]
BLAST of Carg27423 vs. NCBI nr
Match: XP_022961599.1 (uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 uncharacterized protein LOC111780709 [Cucurbita pepo subsp. pepo] >XP_023516954.1 uncharacterized protein LOC111780710 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 2.0e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK
Sbjct: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 163
           ITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 162

[Close]
BLAST of Carg27423 vs. NCBI nr
Match: XP_022968806.1 (uncharacterized protein LOC111467934 [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 8.2e-83
Identity = 159/162 (98.15%), Postives = 161/162 (99.38%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK
Sbjct: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+KNTTHKFEKIGKLVSYATEVTAVVEKN+IKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 61  QKKNTTHKFEKIGKLVSYATEVTAVVEKNRIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAVGVKEV 163
           ITFQTPAGLFRTFPVSAFQVEE LKQVSEKEHGVGAVGVKEV
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEALKQVSEKEHGVGAVGVKEV 162

[Close]
BLAST of Carg27423 vs. NCBI nr
Match: XP_016903169.1 (PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 163
           ITFQTPAGLFRTFPVSAFQVEEP+K  SE KE  VG V VKE+
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]
BLAST of Carg27423 vs. NCBI nr
Match: KGN65013.1 (hypothetical protein Csa_1G181260 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 163
           ITFQTPAGL+RTFPVSAFQVEEP+K VSE KE  V  V VKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 196

[Close]
BLAST of Carg27423 vs. NCBI nr
Match: XP_004139521.2 (PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 3.8e-72
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 163
           ITFQTPAGL+RTFPVSAFQVEEP+K VSE KE  V  V VKE+
Sbjct: 121 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 163

[Close]
BLAST of Carg27423 vs. TAIR10
Match: AT1G56580.1 (Protein of unknown function, DUF538)

HSP 1 Score: 196.8 bits (499), Expect = 1.0e-50
Identity = 102/158 (64.56%), Postives = 123/158 (77.85%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           M + T+E++A+ AE Y GDEIC+EK+KE LKE+ +PNGLLPLKDIEE G  RETG VWLK
Sbjct: 1   MGLVTDEVRAR-AEKYTGDEICREKTKEFLKEVSMPNGLLPLKDIEEVGYDRETGIVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDP-PTG 120
           Q+K+ THKFE IGKLVSYATEV A VE  KIKKLTGVK KELLIWV+L+++ ++ P  +G
Sbjct: 61  QKKSITHKFEAIGKLVSYATEVIAQVEVGKIKKLTGVKAKELLIWVTLNELVLEQPTSSG 120

Query: 121 KITFQTPAGLFRTFPVSAFQVEEPLKQVSEKEHGVGAV 158
           KI F+TP GL RTFPVSAF V E  K  +EK +G   V
Sbjct: 121 KINFRTPTGLSRTFPVSAFVVPEVEKPATEKNNGTTEV 157

[Close]
BLAST of Carg27423 vs. TAIR10
Match: AT1G09310.1 (Protein of unknown function, DUF538)

HSP 1 Score: 191.0 bits (484), Expect = 5.6e-49
Identity = 99/144 (68.75%), Postives = 119/144 (82.64%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           M + TEE++AK AE+Y GDEIC+EK+K  LKEI +PNGLLPLKDIEE G  RE+G VWLK
Sbjct: 1   MGLVTEEVRAK-AEMYTGDEICREKTKCFLKEISMPNGLLPLKDIEEVGYDRESGVVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+ THKF +I KLVSY TEVTA+VE  KIKKLTGVK KELLIWV++++IY ++PPT K
Sbjct: 61  QKKSITHKFTEIDKLVSYGTEVTAIVETGKIKKLTGVKAKELLIWVTINEIYTEEPPT-K 120

Query: 121 ITFQTPAGLFRTFPVSAFQV-EEP 144
           ITF+TP  L RTFPV+AF V EEP
Sbjct: 121 ITFKTPTTLSRTFPVTAFIVPEEP 142

[Close]
BLAST of Carg27423 vs. TAIR10
Match: AT5G46230.1 (Protein of unknown function, DUF538)

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-34
Identity = 65/141 (46.10%), Postives = 101/141 (71.63%), Query Frame = 0 

Query: 2   SVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQ 61
           S  T+  + +GAE+  G+  C++K+KE+L  + LP GLLPL ++ E G  + TGYVW+K 
Sbjct: 3   SQETKSDQREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKI 62

Query: 62  RKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKI 121
           +    H+F+ IG+ VSY +EVTA++E  ++ +LTG+K+KE+LIWV++S+I+V+     +I
Sbjct: 63  KNKVQHRFKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIWVTISEIFVNHQDPTQI 122

Query: 122 TFQTPAGLFRTFPVSAFQVEE 143
           TF  P GL RTFPV+AF+ +E
Sbjct: 123 TFANPTGLSRTFPVTAFEEDE 143

[Close]
BLAST of Carg27423 vs. TAIR10
Match: AT4G24130.1 (Protein of unknown function, DUF538)

HSP 1 Score: 134.8 bits (338), Expect = 4.7e-32
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = 0 

Query: 11  KGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQRKNTTHKFE 70
           +GAE+  G E C ++S ELL+E+G P G++PLK++ ECG VR TGYVW+KQ     H FE
Sbjct: 14  EGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPYEHFFE 73

Query: 71  KIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGKITFQTPAGLF 130
                VSY  EVTA V+K  +KK+TGVK+K++ +WV + ++ +++P + KI F+TP G+ 
Sbjct: 74  ATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVPIVEMSMEEPKSKKIYFKTPMGIG 133

Query: 131 RTFPVSAFQVEE 143
           R+FPV+ F  EE
Sbjct: 134 RSFPVTGFMDEE 145

[Close]
BLAST of Carg27423 vs. TAIR10
Match: AT5G49600.1 (Protein of unknown function, DUF538)

HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28
Identity = 73/164 (44.51%), Postives = 104/164 (63.41%), Query Frame = 0 

Query: 3   VATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLKQR 62
           + TE +KAK AEVY GD+ C+EK   LL EIGLPN LL  K+I+ECG V++TG+VWLK +
Sbjct: 1   MVTEAMKAK-AEVYHGDKTCREKFGSLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHK 60

Query: 63  KNTTH----------KFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIY 122
           +              +F+ +  +V +  EVTA  E N+IKKLTGVK KE ++W+SL +I 
Sbjct: 61  EKKKEDQKRRYQDLLRFDNV--VVCFEDEVTAYFEPNRIKKLTGVKAKEFMVWISLGEIQ 120

Query: 123 VDDPPTGKITFQTPAGLF-RTFPVSAFQ----VEEPLKQVSEKE 152
           V +  +G ITF+T  GL  ++ P+S F+     +  LK+  +KE
Sbjct: 121 V-NRSSGLITFKTEVGLLSKSLPLSVFEDVHGDDHDLKEKPKKE 160

[Close]
BLAST of Carg27423 vs. TrEMBL
Match: tr|A0A1S4E4L7|A0A1S4E4L7_CUCME (uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.7e-73
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 1   MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELL+WVSLSDIYVDDPPTGK
Sbjct: 61  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLLWVSLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 163
           ITFQTPAGLFRTFPVSAFQVEEP+K  SE KE  VG V VKE+
Sbjct: 121 ITFQTPAGLFRTFPVSAFQVEEPVKAASEKKEQVVGTVEVKEI 163

[Close]
BLAST of Carg27423 vs. TrEMBL
Match: tr|A0A0A0LTC9|A0A0A0LTC9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 2.5e-72
Identity = 143/163 (87.73%), Postives = 150/163 (92.02%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MSV TEEIK K  EVY GDEICQEKSKELLKEIGLPNGLLPLKDIEECGI+RETG+VWLK
Sbjct: 34  MSVVTEEIKGKTEEVYHGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIIRETGFVWLK 93

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYATEVTA VEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK
Sbjct: 94  QKKSTTHKFEKIGKLVSYATEVTATVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 153

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSE-KEHGVGAVGVKEV 163
           ITFQTPAGL+RTFPVSAFQVEEP+K VSE KE  V  V VKE+
Sbjct: 154 ITFQTPAGLYRTFPVSAFQVEEPVKAVSEKKEQVVETVEVKEI 196

[Close]
BLAST of Carg27423 vs. TrEMBL
Match: tr|A0A0A0LYR3|A0A0A0LYR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555620 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 2.8e-63
Identity = 119/147 (80.95%), Postives = 139/147 (94.56%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MS+  EE+K K AEVY GDE+CQEKSK++LKE+GLPNGLLPLKDIEECGI+RETG+VW+K
Sbjct: 1   MSIVREEMKGK-AEVYHGDELCQEKSKQILKEVGLPNGLLPLKDIEECGILRETGFVWIK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+TTHKFEKIGKLVSYA EVTA+VEKNKIKKLTGVKTKELL+WVSLSDIYVD+PP+GK
Sbjct: 61  QKKSTTHKFEKIGKLVSYANEVTAIVEKNKIKKLTGVKTKELLVWVSLSDIYVDEPPSGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQV 148
           I+FQTP GLFRTFPVSAFQV++ +K+V
Sbjct: 121 ISFQTPTGLFRTFPVSAFQVQDHVKEV 146

[Close]
BLAST of Carg27423 vs. TrEMBL
Match: tr|V4T5V3|V4T5V3_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002714mg PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 126/166 (75.90%), Postives = 144/166 (86.75%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MS+ TEEI+AK AE+Y+GDEICQEKSK LL EIGLPNGLLPL DIEECG V+ETG+VWLK
Sbjct: 1   MSLVTEEIRAK-AELYRGDEICQEKSKFLLTEIGLPNGLLPLHDIEECGYVKETGFVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+ THKFEKIGKLVSYATEVTAVVE N+IKKLTGVK+KELLIW+++SDIYVDDPPTGK
Sbjct: 61  QKKSITHKFEKIGKLVSYATEVTAVVEPNRIKKLTGVKSKELLIWITMSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQVSEKE----HGVGAVGVKEV 163
           ITFQTPAGL R+FPVSAFQVEEP K   + +        AVGV++V
Sbjct: 121 ITFQTPAGLSRSFPVSAFQVEEPTKNAKDSKSKDVKDPAAVGVRDV 165

[Close]
BLAST of Carg27423 vs. TrEMBL
Match: tr|A0A2P5E7Y1|A0A2P5E7Y1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225560 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-62
Identity = 131/168 (77.98%), Postives = 145/168 (86.31%), Query Frame = 0 

Query: 1   MSVATEEIKAKGAEVYKGDEICQEKSKELLKEIGLPNGLLPLKDIEECGIVRETGYVWLK 60
           MS+ TEEIKAK AEVY GDEICQEKSK LL EIGLPNGLLPLKDIEECG V+ETG+VWLK
Sbjct: 1   MSLVTEEIKAK-AEVYHGDEICQEKSKFLLTEIGLPNGLLPLKDIEECGYVKETGFVWLK 60

Query: 61  QRKNTTHKFEKIGKLVSYATEVTAVVEKNKIKKLTGVKTKELLIWVSLSDIYVDDPPTGK 120
           Q+K+ THKFEKIGKLVSYATEVTA+ E NKI+KLTGVKTKELLIW+SLSDIYVDDPPTGK
Sbjct: 61  QKKSVTHKFEKIGKLVSYATEVTAIAEPNKIRKLTGVKTKELLIWISLSDIYVDDPPTGK 120

Query: 121 ITFQTPAGLFRTFPVSAFQVEEPLKQ---VSEKEHGVG---AVGVKEV 163
           ITF+TPAGL R+FPVSAF+VEE +K+     EK+   G   AV VKEV
Sbjct: 121 ITFKTPAGLSRSFPVSAFEVEEEVKENKDAKEKKEVNGASAAVEVKEV 167

The following BLAST results are available for this feature:
BLAST of Carg27423 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022961599.12.0e-84100.00uncharacterized protein LOC111462128 [Cucurbita moschata] >XP_023516953.1 unchar... [more]
XP_022968806.18.2e-8398.15uncharacterized protein LOC111467934 [Cucurbita maxima][more]
XP_016903169.11.0e-7287.73PREDICTED: uncharacterized protein LOC103502227 [Cucumis melo][more]
KGN65013.13.8e-7287.73hypothetical protein Csa_1G181260 [Cucumis sativus][more]
XP_004139521.23.8e-7287.73PREDICTED: uncharacterized protein LOC101214389 [Cucumis sativus][more]
BLAST of Carg27423 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G56580.11.0e-5064.56Protein of unknown function, DUF538[more]
AT1G09310.15.6e-4968.75Protein of unknown function, DUF538[more]
AT5G46230.13.9e-3446.10Protein of unknown function, DUF538[more]
AT4G24130.14.7e-3248.48Protein of unknown function, DUF538[more]
AT5G49600.12.4e-2844.51Protein of unknown function, DUF538[more]
BLAST of Carg27423 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg27423 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E4L7|A0A1S4E4L7_CUCME6.7e-7387.73uncharacterized protein LOC103502227 OS=Cucumis melo OX=3656 GN=LOC103502227 PE=... [more]
tr|A0A0A0LTC9|A0A0A0LTC9_CUCSA2.5e-7287.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181260 PE=4 SV=1[more]
tr|A0A0A0LYR3|A0A0A0LYR3_CUCSA2.8e-6380.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G555620 PE=4 SV=1[more]
tr|V4T5V3|V4T5V3_9ROSI1.4e-6275.90Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10002714mg PE=4 ... [more]
tr|A0A2P5E7Y1|A0A2P5E7Y1_9ROSA1.4e-6277.98Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_225560 PE=4 S... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036758At5g01610-like
IPR007493DUF538
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27423-RACarg27423-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007493Protein of unknown function DUF538PFAMPF04398DUF538coord: 27..139
e-value: 1.3E-33
score: 115.7
IPR007493Protein of unknown function DUF538PANTHERPTHR31676FAMILY NOT NAMEDcoord: 1..153
IPR036758At5g01610-like superfamilyGENE3DG3DSA:2.30.240.10coord: 8..149
e-value: 3.1E-25
score: 90.6
IPR036758At5g01610-like superfamilySUPERFAMILYSSF141562At5g01610-likecoord: 10..143
NoneNo IPR availablePANTHERPTHR31676:SF10SUBFAMILY NOT NAMEDcoord: 1..153

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg27423ClCG01G011130Watermelon (Charleston Gray)carwcgB0720
Carg27423CmoCh10G012440Cucurbita moschata (Rifu)carcmoB1011
Carg27423Lsi02G011500Bottle gourd (USVL1VR-Ls)carlsiB680
Carg27423Cp4.1LG18g00130Cucurbita pepo (Zucchini)carcpeB1046
Carg27423Cla97C01G010840Watermelon (97103) v2carwmbB0778
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg27423Cucurbita maxima (Rimu)carcmaB1039