Lsi02G010720 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G010720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Bromo-adjacent homology (BAH) domain-containing family protein
Location	chr02 : 11858779 .. 11863217 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGATTGCGCTCCAAAGAAGGCGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTCATGATGAAGAGCTAAAGCTAGGGTTTCTGTTCTTCCCCCAATTTCTAGGGCTTCTTCTTTCTCCATTTCTACTTTCATTTCTCCCATTGTTTCCTCACTCATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGGTAAACTCCTTCATTTACTTGTTTCATTTTACTTCCAAATGCTCTCTGTCTCTCGGTCTAGTACAATTCCTTCAATGCTGCTTTACGAGTCCTGATTTGACGGATTTTTCAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTGTGAGTTTTCACTTTTTTTGTTGTCTAGTCTAATGTCTGATTCTGGTGCAAATTCCTTGAATGGGGGGTTTTTTTTTTTTATATTTATTTATTTATTTTCCATTTCCTTGCAGCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTAAATCTTCTTGTTAATTCTGGGAACTAATGTTTGCTTTTGTGTACTGAATCCCTGAATTCTCTGGTGTATTTGCACTTTCCAGAGTGAAGTGTTTACATAAGCAATTGAAGGGTCGAATTTGTTTGTAAAAGGAGTATGCAGGGGATGATGAATTGAGAGTGAATTTCGGATAAGTTTTAAGGTAGTGATTTAAAGTGGCACACTTTTTTTTAGAAGAACTTTTTGAAAGAAGCACTAATTAAGTGCTTCTCACTTTTAATTTTTAATTTTTTTTTAAAATTTTCTTTTTTGGTGTTTTTGGATCTTTCAGAATCACCTTTTGTCATGTGACCAAATATATGATTGAAAAGTACTTTTAATTAGTTAAATGTCAGCTTTCTGAAACTCACCTTAAGTTTTATGAATTAACAATTGAAGATTATTTAATCAAAGACAAAGTTCTAGATGCACTGAAATGGCTTTTGGCATTGATTGATGCACCATAGACATTATATTAGTCTGTACAAAGATCACCTTGATCGGTTAATTAGCCATTGTTGTACCATAGGTGAAGCTAATTGTTAACGTTTAAAGTGCAGTGTGATGTACAGTCTTTTTTGGATTGTAAATTCTATTATGTTGCTAGAAATGGAATATTCACGTTAACTCTATTCTATTAGTCTATTAGAACTCCATAACTTAGTTCTGATTGGAGTGGTTATATTATACCATTTTGGTTGATACTGGAACTATTTAGAGAGAGTCAAACTCAAGAGTCCAGTCAGTCTCAATAATTTATTGTTTTCTGAAAGCACAAAGTTCTCATGTTGCCTTTGGTCTTTAGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGGTTAGTAGCTGTTATCTGTTGCGTCCTACGTAGAATGGTAGTTGAATATCAATCATCTTTGTCACCGTATTAAGGTTTTCTATTCACGTCAGATGTCTTGATTTCTTTTTTGATGTATTTAAAGATTAACTCAGAAGCTCAAGTACAGACAAGAAGACAAATGAAATACACGCAATGTTTGGCATTAGTCAATGCTAAATGTCCAGACCATCAGTGTGGTCCCTTTCCAATCACTTCAGTCATTTTTTAATTAATTAACTTTAAATCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCCGGACACTCACAGATATAAAAAAAAAAAATTAACTTTGAAAGTTTTTCTTTTGATTCACGTGCTATTTGTTTTCCAAAAGCCAGTCCTATGTTTCTTAAACGTCGGCCATTGGGCTTCCTCTTTGCTGATGATCGATTTGAGATTATTGTCTACTTTCACATGTCTAATGAATAATCTAATCAGATGCTGTTGTTATGTGTTTGGTGAGTTTATCCTAAATGGTTTGTCGAATGTCTTCTAATAACTTTTACTTTTACCATAGGTTTTGTTTAAATTAGAATGCATTCATTGGAAATGATTATATACCAGAATATATGGTTTTGTTTTCTGCATACGCCAAATATTCCTCTTACCTCAAGAAAATTCTGACAGCTACATAAGGACATGTCTGCGTGTATGATGAAAAGAGTTGAGAGTTCTTTTGTCAGTTTGATTCATCAACGACCAAATTATTTTTTCATAATAATTATAAAAAAATCAGTTCCTTATTTTCAAATGTCATCTTTTTTAGGCTTGTACATGTCATATTGGTCAATTGTTTTGTTGTTTCTATATAGTTTTTCAACTTTCTTCATGTTGTTGCAAAAGACGCTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGGCAACCTTCCCGAAAGTTAAAGGTTCAAAATATTAAAAGTACTGGAATCTCCCCTGCCCCCACCCCCTTTGGACAAAATCATTGCTTTCTTATCTGTCAATGCAAGTACATTATTATCATGACACCCTTTATCATGCTTACCGTTCTAGATTTGAGCTGTAATGTGTAAGCAAGCTTTTCCAATAACTTTACAGTTCCTTCTAAGTTCAAGAAGGTAGTTTATTTGGAAAAATCAATACTCCTTTCTGTTTTTCGATTTTCAGACATGTGGGTGCATGGGAATGCTGTTATTGATGTGGTGAGAAATGTAATTTGCTGTATATGGTCTGAAAAAGATGTCTTTTTGATTTCAAAAGTCATCTATCATCAAACATTAAGACATATTTATGTTGCTTCAAAATTTTAGATTAAAGTTTAACTTTATTCATTGGACTTTAAAGGTTGTATATGATATGTCTTGTTGAACTTTACAATGTTTCAAGTAGGTTTCGGAATTTCAATTCTGTTTAAATCCTGAGTCCCTGACGTGTAAAAGTGTTTTATTGGTTTTTAAACAATCAATTTTTACCTATCTTTGTGCATGATAGGTACTATTCATATTCAACTTATATATATTTCTTTGGTTTCAAATTTCGAAATCTATAAGACAACTTTTCAATTTTTAGTTTAATAGATAAGTCCAGAAATTTTTTAAAAGGTTGAACTTGACAAGTACAAATTTGACCACAAAGGTACAACGTTGAACTTGACAAGCATTTATTTGACACAAAAATAAAAGTTTAAGAACTTATTAGATACTTTTTAAAGTTTAGAGATCTATTAGGTACATACTTGTAAATTCAAGGCCTGCAATATTAAGTAATCTGCATTTAATTCCTTTTTTGATGCATTATTTGTTATAGTTTCATGGTCATTTCAAGACCAACTTCATTAGTTAGGATTTCTGATTATCATTGAAAAATCTCCACCTCCAATACACATTCATTTTCGCCATTTTATCTCTAAACCTTGTCAAGCTACAAGTATACTAGTAATCTCTATGACAGTAGATGTTTCAGGCGGATAAGAATCAATAAAAGATAGAAGAAATCAACTTTCCCTCATCGATGAAACTACGAGCCCCACCTGTTTGAGGAAGATAACAATCTCATTAGTTGCTTTGAGTTCTGTTTCTCTAATGAGTTCGACTAACATAAAGTTCGTTATTGGTTGCAGCTTGAGTCTAAGCGACGGAAGAGATAACCACGGCAGTTGGAATTCTTTGTTGGATTCAACCATGGCAGATATGGAGAGTTCAATTGTTATTTATGTAGGTGGTGTATAGCATAGCTTGGACTTTGCTGTGTAAAACTTTTGTTTTGTGACTGAAGTTATATATATATGTGTGTATGATGATGTTGTAGTAGTAGTAGTAGTAGGGGCTCAGGGAGTTTCTCCATAACAGTTCAGGCTAGTCGTGTTGTATCATTTTGGTAAACTCTCTATTCTGTTTCTGACTTTGGAACTTTTAATGTGATTTGGGGACACTAGAAAGTGGAAACAGAAATTTTAGAGGTTGCTGAAAATGATCAATTCTAAGTTTGCATATGAGAGTAGTCGAATGATAGGCATTTATTTTTTCATACTAAAATAAACATTTATTATTACTAGTTTGAGTACAGGTAT

mRNA sequence

CGCGATTGCGCTCCAAAGAAGGCGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTCATGATGAAGAGCTAAAGCTAGGGTTTCTGTTCTTCCCCCAATTTCTAGGGCTTCTTCTTTCTCCATTTCTACTTTCATTTCTCCCATTGTTTCCTCACTCATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGGTAAACTCCTTCATTTACTTGTTTCATTTTACTTCCAAATGCTCTCTGTCTCTCGGTCTAGTACAATTCCTTCAATGCTGCTTTACGAGTCCTGATTTGACGGATTTTTCAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGGTTAGTAGCTGTTATCTGTTGCGTCCTACGTAGAATGGTAGTTGAATATCAATCATCTTTGTCACCGTATTAAGGTTTTCTATTCACGTCAGATGTCTTGATTTCTTTTTTGATGTATTTAAAGATTAACTCAGAAGCTCAAGTACAGACAAGAAGACAAATGAAATACACGCAATGTTTGGCATTAGTCAATGCTAAATGTCCAGACCATCAGTGTGGTCCCTTTCCAATCACTTCAGTCATTTTTTAATTAATTAACTTTAAATCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGCCCCGGACACTCACAGATATAAAAAAAAAAAATTAACTTTGAAAGTTTTTCTTTTGATTCACGTGCTATTTGTTTTCCAAAAGCCAGTCCTATGTTTCTTAAACGTCGGCCATTGGGCTTCCTCTTTGCTGATGATCGATTTGAGATTATTGTCTACTTTCACATGTCTAATGAATAATCTAATCAGATGCTGTTGTTATGTGTTTGGTGAGTTTATCCTAAATGGTTTGTCGAATGTCTTCTAATAACTTTTACTTTTACCATAGGTTTTGTTTAAATTAGAATGCATTCATTGGAAATGATTATATACCAGAATATATGGTTTTGTTTTCTGCATACGCCAAATATTCCTCTTACCTCAAGAAAATTCTGACAGCTACATAAGGACATGTCTGCGTGTATGATGAAAAGAGTTGAGAGTTCTTTTGTCAGTTTGATTCATCAACGACCAAATTATTTTTTCATAATAATTATAAAAAAATCAGTTCCTTATTTTCAAATGTCATCTTTTTTAGGCTTGTACATGTCATATTGGTCAATTGTTTTGTTGTTTCTATATAGTTTTTCAACTTTCTTCATGTTGTTGCAAAAGACGCTATGATCCATCCAACTAAGGAGGACATCATTCGTTGGGAGGCAACCTTCCCGAAAGTTAAAGGTTCAAAATATTAAAAGTACTGGAATCTCCCCTGCCCCCACCCCCTTTGGACAAAATCATTGCTTTCTTATCTGTCAATGCAAGTACATTATTATCATGACACCCTTTATCATGCTTACCGTTCTAGATTTGAGCTGTAATGTGTAAGCAAGCTTTTCCAATAACTTTACAGTTCCTTCTAAGTTCAAGAAGGTAGTTTATTTGGAAAAATCAATACTCCTTTCTGTTTTTCGATTTTCAGACATGTGGGTGCATGGGAATGCTGTTATTGATGTGCTTGAGTCTAAGCGACGGAAGAGATAACCACGGCAGTTGGAATTCTTTGTTGGATTCAACCATGGCAGATATGGAGAGTTCAATTGTTATTTATGTAGGTGGTGTATAGCATAGCTTGGACTTTGCTGTGTAAAACTTTTGTTTTGTGACTGAAGTTATATATATATGTGTGTATGATGATGTTGTAGTAGTAGTAGTAGTAGGGGCTCAGGGAGTTTCTCCATAACAGTTCAGGCTAGTCGTGTTGTATCATTTTGGTAAACTCTCTATTCTGTTTCTGACTTTGGAACTTTTAATGTGATTTGGGGACACTAGAAAGTGGAAACAGAAATTTTAGAGGTTGCTGAAAATGATCAATTCTAAGTTTGCATATGAGAGTAGTCGAATGATAGGCATTTATTTTTTCATACTAAAATAAACATTTATTATTACTAGTTTGAGTACAGGTAT

Coding sequence (CDS)

CGCGATTGCGCTCCAAAGAAGGCGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTCATGATGAAGAGCTAAAGCTAGGGTTTCTGTTCTTCCCCCAATTTCTAGGGCTTCTTCTTTCTCCATTTCTACTTTCATTTCTCCCATTGTTTCCTCACTCATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGGTAAACTCCTTCATTTACTTGTTTCATTTTACTTCCAAATGCTCTCTGTCTCTCGGTCTAGTACAATTCCTTCAATGCTGCTTTACGAGTCCTGATTTGACGGATTTTTCAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACGAGTAAGCTACCGTATGTAGCGCGTGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGAGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTATAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAATATTGGACCATTTTGTGTGTTCTGAATGTGCATCTGATACCGACATCAAGAAAAATGAGAATACATTTTCAGCGTCACCGGTGGCCGATGGCAAGGTTAGTAGCTGTTATCTGTTGCGTCCTACGTAG

Protein sequence

RDCAPKKASVWIVFIFNDDEIHDEELKLGFLFFPQFLGLLLSPFLLSFLPLFPHSWPKPDLPRKTWTLTPSEAPTRSLEVNSFIYLFHFTSKCSLSLGLVQFLQCCFTSPDLTDFSVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVADGKVSSCYLLRPT

Homology

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BLAST of Lsi02G010720 vs. Swiss-Prot
Match: EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.1e-95
Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+  K PYVARVEKIEAD RNN+KV  RWYYRPEES+GGRRQFHGAKELFLS
Sbjct: 34  GDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGAKELFLS 93

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DH+DVQSAHTIEGKCIVH+FKNYT+L+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 94  DHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 153

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVC+EC+SD D+KK++N F++SP  
Sbjct: 154 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPAD 213

Query: 298 DGKV 302
           D KV
Sbjct: 214 DVKV 217

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BLAST of Lsi02G010720 vs. Swiss-Prot
Match: EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 2.4e-74
Identity = 137/190 (72.11%), Postives = 156/190 (82.11%), Query Frame = 1


Query: 115 FSVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKEL 174
           F+VGDCVLMRPS+  K PYVARVEKIEAD RNN+KV  RWYY PEES GGRRQ HGAKEL
Sbjct: 40  FTVGDCVLMRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKEL 99

Query: 175 FLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCK 234
           FLSDH+DVQSAHTIEGKCIVH+FKNYT+L+NVG EDYYC F+YKAATGAFTPDRVAVY K
Sbjct: 100 FLSDHFDVQSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYK 159

Query: 235 CEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTD-IKKNENTFSA 294
           CEMPYN D+LM +   C    H ACV +TIEEAK L+HFVC EC+SD D +K+ +N F++
Sbjct: 160 CEMPYNSDELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFAS 219

Query: 295 SPVADGKVSS 304
           S   D K S+
Sbjct: 220 STTNDLKPSA 228

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BLAST of Lsi02G010720 vs. Swiss-Prot
Match: SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.7e-69
Identity = 125/186 (67.20%), Postives = 143/186 (76.88%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNR-NNIKVRVRWYYRPEESIGGRRQFHGAKELFL 177
           GD VLMR SE  K  YVARVE IE D R ++ KVRVRWYYRPEESIGGRRQFHGAKE+FL
Sbjct: 26  GDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFL 85

Query: 178 SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 237
           SDH+D QSA TIEGKC VHSF +YTKLD+VG +D++CRFEY + TGAF PDRV V+CKCE
Sbjct: 86  SDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCE 145

Query: 238 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPV 297
           MPYNPDDLMVQCE C +W+HP+C+  TIEEAK  D+F C EC+       N N  S S  
Sbjct: 146 MPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHNSN--STSNN 205

Query: 298 ADGKVS 303
            D KV+
Sbjct: 206 RDAKVN 209

[Close]

BLAST of Lsi02G010720 vs. Swiss-Prot
Match: BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 SV=3)

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-10
Identity = 40/123 (32.52%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 117  VGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 176
            VGDC +   +    LPY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G   L+ 
Sbjct: 2486 VGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKNALYQ 2545

Query: 177  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNV-----GAEDYYCRFEYKAATGAF-TPDRVA 234
            S H D     TI  KC V + + Y ++          + YY    Y   TG   T D V 
Sbjct: 2546 SCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTADGVP 2605

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BLAST of Lsi02G010720 vs. Swiss-Prot
Match: BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Bahcc1 PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-10
Identity = 41/123 (33.33%), Postives = 59/123 (47.97%), Query Frame = 1


Query: 117  VGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 176
            +GDC +   +    LPY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G   L+ 
Sbjct: 2521 IGDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGKNALYQ 2580

Query: 177  SDHYDVQSAHTIEGKCIVHSFKNYTKL----DNVGAED-YYCRFEYKAATGAF-TPDRVA 234
            S H D     TI  KC V   + Y ++         +D YY    Y   TG   T D V 
Sbjct: 2581 SCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTADGVP 2640

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BLAST of Lsi02G010720 vs. TrEMBL
Match: A0A0A0M145_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701230 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.2e-102
Identity = 178/186 (95.70%), Postives = 179/186 (96.24%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAK LDHFVCSEC SD DIKKNEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 205

Query: 298 DGKVSS 304
           DGK+ S
Sbjct: 206 DGKLES 211

[Close]

BLAST of Lsi02G010720 vs. TrEMBL
Match: V7AIX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158300g PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 5.6e-99
Identity = 170/186 (91.40%), Postives = 177/186 (95.16%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKVSS 304
           DGKV S
Sbjct: 206 DGKVDS 211

[Close]

BLAST of Lsi02G010720 vs. TrEMBL
Match: A0A0S3S9S4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050700 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 7.4e-99
Identity = 170/186 (91.40%), Postives = 177/186 (95.16%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKVSS 304
           DGKV S
Sbjct: 206 DGKVDS 211

[Close]

BLAST of Lsi02G010720 vs. TrEMBL
Match: V7AHU2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G157300g PE=4 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.1e-98
Identity = 171/188 (90.96%), Postives = 178/188 (94.68%), Query Frame = 1


Query: 116 SVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELF 175
           + GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELF
Sbjct: 38  AAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELF 97

Query: 176 LSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKC 235
           LSDHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKC
Sbjct: 98  LSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKC 157

Query: 236 EMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTD--IKKNENTFSA 295
           EMPYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D  IKK + TFSA
Sbjct: 158 EMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMNIKKPQATFSA 217

Query: 296 SPVADGKV 302
           SPVADGKV
Sbjct: 218 SPVADGKV 225

[Close]

BLAST of Lsi02G010720 vs. TrEMBL
Match: A0A0S3S9M9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G049600 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.8e-98
Identity = 168/184 (91.30%), Postives = 176/184 (95.65%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVG+EDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCVVHSFKNYTKLENVGSEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKV 302
           DGKV
Sbjct: 206 DGKV 209

[Close]

BLAST of Lsi02G010720 vs. TAIR10
Match: AT4G22140.1 (AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-96
Identity = 157/184 (85.33%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+  K PYVARVEKIEAD RNN+KV  RWYYRPEES+GGRRQFHGAKELFLS
Sbjct: 34  GDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPEESLGGRRQFHGAKELFLS 93

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DH+DVQSAHTIEGKCIVH+FKNYT+L+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 94  DHFDVQSAHTIEGKCIVHTFKNYTRLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 153

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVC+EC+SD D+KK++N F++SP  
Sbjct: 154 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCAECSSDDDVKKSQNGFTSSPAD 213

Query: 298 DGKV 302
           D KV
Sbjct: 214 DVKV 217

[Close]

BLAST of Lsi02G010720 vs. TAIR10
Match: AT4G04260.1 (AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 265.0 bits (676), Expect = 5.8e-71
Identity = 130/182 (71.43%), Postives = 148/182 (81.32%), Query Frame = 1


Query: 123 MRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 182
           MRPS+  K PYVARVEKIEAD RNN+KV  RWYY PEES GGRRQ HGAKELFLSDH+DV
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60

Query: 183 QSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPD 242
           QSAHTIEGKCIVH+FKNYT+L+NVG EDYYC F+YKAATGAFTPDRVAVY KCEMPYN D
Sbjct: 61  QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120

Query: 243 DLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTD-IKKNENTFSASPVADGKV 302
           +LM +   C    H ACV +TIEEAK L+HFVC EC+SD D +K+ +N F++S   D K 
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLKP 180

Query: 303 SS 304
           S+
Sbjct: 181 SA 181

[Close]

BLAST of Lsi02G010720 vs. TAIR10
Match: AT4G39100.1 (AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 262.3 bits (669), Expect = 3.8e-70
Identity = 125/186 (67.20%), Postives = 143/186 (76.88%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNR-NNIKVRVRWYYRPEESIGGRRQFHGAKELFL 177
           GD VLMR SE  K  YVARVE IE D R ++ KVRVRWYYRPEESIGGRRQFHGAKE+FL
Sbjct: 26  GDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEESIGGRRQFHGAKEVFL 85

Query: 178 SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 237
           SDH+D QSA TIEGKC VHSF +YTKLD+VG +D++CRFEY + TGAF PDRV V+CKCE
Sbjct: 86  SDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDFFCRFEYNSTTGAFDPDRVTVFCKCE 145

Query: 238 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPV 297
           MPYNPDDLMVQCE C +W+HP+C+  TIEEAK  D+F C EC+       N N  S S  
Sbjct: 146 MPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPDNFYCEECSPQQQNLHNSN--STSNN 205

Query: 298 ADGKVS 303
            D KV+
Sbjct: 206 RDAKVN 209

[Close]

BLAST of Lsi02G010720 vs. TAIR10
Match: AT4G14700.1 (AT4G14700.1 origin recognition complex 1)

HSP 1 Score: 54.7 bits (130), Expect = 1.2e-07
Identity = 27/93 (29.03%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 133 YVARVEKIEADNRNNIK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGK 192
           + AR+EK+  +  + +  +R RWY  PEE++ GR++ +  +EL+L++ +       +   
Sbjct: 245 WAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRH 304

Query: 193 CIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAF 225
           C V   K ++K  N G + + C +EY    G+F
Sbjct: 305 CFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSF 337

[Close]

BLAST of Lsi02G010720 vs. TAIR10
Match: AT4G23120.1 (AT4G23120.1 Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.0e-07
Identity = 31/95 (32.63%), Postives = 52/95 (54.74%), Query Frame = 1


Query: 115 FSVGDCVLMRPSETSKLPYVARVEKIEADNRN-NIKVRVRWYYRPEE---SIGGRRQFHG 174
           + + D VL+ P +  K PYVA ++ I    +  ++K+ V+W YRPEE      G  +  G
Sbjct: 59  YGLEDSVLLVPEDGEK-PYVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKG 118

Query: 175 AKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDN 206
           +++LF S H D   A +++  CIVH  +   ++ N
Sbjct: 119 SRDLFYSFHRDEVFAESVKDDCIVHFVQENKQIPN 152

[Close]

BLAST of Lsi02G010720 vs. NCBI nr
Match: gi|659118193|ref|XP_008458992.1| (PREDICTED: protein polybromo-1 [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 1.1e-103
Identity = 180/187 (96.26%), Postives = 181/187 (96.79%), Query Frame = 1


Query: 117 VGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 176
           VGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL
Sbjct: 25  VGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFL 84

Query: 177 SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 236
           SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE
Sbjct: 85  SDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCE 144

Query: 237 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPV 296
           MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAK LDHFVCSEC SD DIKKNEN FSAS V
Sbjct: 145 MPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDADIKKNENAFSASSV 204

Query: 297 ADGKVSS 304
           ADGK+ S
Sbjct: 205 ADGKLES 211

[Close]

BLAST of Lsi02G010720 vs. NCBI nr
Match: gi|449455381|ref|XP_004145431.1| (PREDICTED: protein polybromo-1 [Cucumis sativus])

HSP 1 Score: 379.4 bits (973), Expect = 6.0e-102
Identity = 178/186 (95.70%), Postives = 179/186 (96.24%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY RFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACVSMTIEEAK LDHFVCSEC SD DIKKNEN FSASPVA
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECGSDGDIKKNENAFSASPVA 205

Query: 298 DGKVSS 304
           DGK+ S
Sbjct: 206 DGKLES 211

[Close]

BLAST of Lsi02G010720 vs. NCBI nr
Match: gi|593262004|ref|XP_007133181.1| (hypothetical protein PHAVU_011G158300g [Phaseolus vulgaris])

HSP 1 Score: 369.0 bits (946), Expect = 8.1e-99
Identity = 170/186 (91.40%), Postives = 177/186 (95.16%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKVSS 304
           DGKV S
Sbjct: 206 DGKVDS 211

[Close]

BLAST of Lsi02G010720 vs. NCBI nr
Match: gi|950937095|ref|XP_014519991.1| (PREDICTED: protein polybromo-1-like [Vigna radiata var. radiata])

HSP 1 Score: 368.6 bits (945), Expect = 1.1e-98
Identity = 170/186 (91.40%), Postives = 177/186 (95.16%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKVSS 304
           DGKV S
Sbjct: 206 DGKVDS 211

[Close]

BLAST of Lsi02G010720 vs. NCBI nr
Match: gi|950947188|ref|XP_014494625.1| (PREDICTED: protein polybromo-1-like isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 367.9 bits (943), Expect = 1.8e-98
Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 1


Query: 118 GDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLS 177
           GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRVRWYYRPEESIGGRRQFHGAKELFLS
Sbjct: 26  GDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRVRWYYRPEESIGGRRQFHGAKELFLS 85

Query: 178 DHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 237
           DHYDVQSAHTIEGKC+VHSFKNYTKL+NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM
Sbjct: 86  DHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEM 145

Query: 238 PYNPDDLMVQCEGCKDWYHPACVSMTIEEAKILDHFVCSECASDTDIKKNENTFSASPVA 297
           PYNPDDLMVQCEGCKDWYHPACV MTIEEAK LDHFVCSEC+SD D+KK + TFSASP A
Sbjct: 146 PYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDHFVCSECSSDDDMKKPQATFSASPGA 205

Query: 298 DGKV 302
           DGKV
Sbjct: 206 DGKV 209

The following BLAST results are available for this feature:

BLAST of Lsi02G010720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EBS_ARATH	4.1e-95	85.33	Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1	[more]
EBSL_ARATH	2.4e-74	72.11	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana GN=At4g04260 PE=3...	[more]
SHL_ARATH	6.7e-69	67.20	Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1	[more]
BAHC1_HUMAN	1.1e-10	32.52	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 S...	[more]
BAHC1_MOUSE	1.4e-10	33.33	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Bahcc1 PE=2 S...	[more]

BLAST of Lsi02G010720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M145_CUCSA	4.2e-102	95.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701230 PE=4 SV=1	[more]
V7AIX2_PHAVU	5.6e-99	91.40	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158300g PE=4 SV=1	[more]
A0A0S3S9S4_PHAAN	7.4e-99	91.40	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050700 PE=...	[more]
V7AHU2_PHAVU	2.1e-98	90.96	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G157300g PE=4 SV=1	[more]
A0A0S3S9M9_PHAAN	2.8e-98	91.30	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G049600 PE=...	[more]

BLAST of Lsi02G010720 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22140.1	2.3e-96	85.33	PHD finger family protein / bromo-adjacent homology (BAH) domain-con...	[more]
AT4G04260.1	5.8e-71	71.43	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G39100.1	3.8e-70	67.20	PHD finger family protein / bromo-adjacent homology (BAH) domain-con...	[more]
AT4G14700.1	1.2e-07	29.03	origin recognition complex 1	[more]
AT4G23120.1	2.0e-07	32.63	Bromo-adjacent homology (BAH) domain-containing protein	[more]

BLAST of Lsi02G010720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118193\|ref\|XP_008458992.1\|	1.1e-103	96.26	PREDICTED: protein polybromo-1 [Cucumis melo]	[more]
gi\|449455381\|ref\|XP_004145431.1\|	6.0e-102	95.70	PREDICTED: protein polybromo-1 [Cucumis sativus]	[more]
gi\|593262004\|ref\|XP_007133181.1\|	8.1e-99	91.40	hypothetical protein PHAVU_011G158300g [Phaseolus vulgaris]	[more]
gi\|950937095\|ref\|XP_014519991.1\|	1.1e-98	91.40	PREDICTED: protein polybromo-1-like [Vigna radiata var. radiata]	[more]
gi\|950947188\|ref\|XP_014494625.1\|	1.8e-98	91.85	PREDICTED: protein polybromo-1-like isoform X1 [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019787	Znf_PHD-finger
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR011011	Znf_FYVE_PHD
IPR001965	Znf_PHD
IPR001025	BAH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0031507	heterochromatin assembly
biological_process	GO:0008150	biological_process
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005677	chromatin silencing complex
cellular_component	GO:0042575	DNA polymerase complex
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000976	transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G010720.1	Lsi02G010720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 115..227 score: 5.8
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 113..228 score: 6.8
IPR001025	Bromo adjacent homology (BAH) domain	PROFILE	PS51038	BAH	coord: 113..228 score: 23
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 232..279 score: 4.
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 224..282 score: 1.62
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 229..286 score: 1.1
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 233..278 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 232..280 score: 1.9
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 230..281 score: 8
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 117..261 score: 9.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G010720	Csa1G701230	Cucumber (Chinese Long) v2	culsiB033
Lsi02G010720	CSPI01G34210	Wild cucumber (PI 183967)	cpilsiB034
Lsi02G010720	Cucsa.332660	Cucumber (Gy14) v1	cgylsiB539
Lsi02G010720	CmaCh18G005710	Cucurbita maxima (Rimu)	cmalsiB369
Lsi02G010720	CmaCh13G004150	Cucurbita maxima (Rimu)	cmalsiB207
Lsi02G010720	CmoCh18G005480	Cucurbita moschata (Rifu)	cmolsiB356
Lsi02G010720	CmoCh13G004430	Cucurbita moschata (Rifu)	cmolsiB197
Lsi02G010720	Cla004590	Watermelon (97103) v1	lsiwmB206
Lsi02G010720	MELO3C021722	Melon (DHL92) v3.5.1	lsimeB180
Lsi02G010720	ClCG01G009700	Watermelon (Charleston Gray)	lsiwcgB169
Lsi02G010720	MELO3C021722.2	Melon (DHL92) v3.6.1	lsimedB190
Lsi02G010720	Cla97C01G009910	Watermelon (97103) v2	lsiwmbB153
Lsi02G010720	Bhi08G000706	Wax gourd	lsiwgoB255
Lsi02G010720	Cp4.1LG02g09610	Cucurbita pepo (Zucchini)	cpelsiB449
Lsi02G010720	Cp4.1LG20g06290	Cucurbita pepo (Zucchini)	cpelsiB417
Lsi02G010720	Carg27282	Silver-seed gourd	carlsiB102
Lsi02G010720	Carg25909	Silver-seed gourd	carlsiB201

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G010720	Cucumber (Chinese Long) v3	cuclsiB034
Lsi02G010720	Cucumber (Gy14) v2	cgyblsiB030