ClCG01G009700 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACTTCCAACGTACGTGTGAATGTAAAAGGTCGCGATTGCGCTCCAAAGAAGGCGTCAGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTAATCATGGTGAGCTACAGCTAGGGTTTCTGTTCTTCCCCCAATTTCTAGGGCTTCTTCCTTCTCCATTTCTACTCTCATTTCTCCCATTGCTTCCTCACTCATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGGTAAACTCCTTCGCCCAAAACTATGAATCATCTCCTTCATTTTACTTCCAAATGCTCTCTGTCTCTCCCTCTGCTAGAATGTCCTCCAATGCTGCTTTACTCGTCCTGATTTGGCGGATTTTTCAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACTAGTAAGCTCCCGTATGTAGCGCGCGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGCGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGTAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTCGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTGTGAGTTTTCACTTTTTCTAATCTAATATGTGATTCTGGTGCAAATTGCTTGAATGGGTTTATTTATTTATTTATTATTTATTTTCCATTTCCTTGCAGCTATTGCAAATGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAAGACTGGTAAATCTTCTTGTTAATTCTGGGAACTAATGTTTGCTTTTGTGTACTGAATCCCTGAATTGTCTGGTGTATTTTCACTTTCCAGAGTGAAGTATTTACATAAGCAATTGAAGGGTCGAATTTGTTTGTAGGAGAGTATGCAGGGCATGATGAATTGAGAGTGAATTTCGGATAAGTTTTAAGGTAGTGCTTTAAAGTGGCACACTCTTTTTCAGAAGAACTTTTTGAAAGAAGCACTAATTAAGTGCTTCTCACTTTTAATTTTTAATTTTCTTTTTTACTGTTTCTGGATCTTGCAGAATCACCTTTTGTCATGTGACCAAATATATGATTGAAAAGTACTTTTAATTAGTTAAATGTCAGCTTTCTGAAACTCACCTTAAGTTTGTATGAAATTAAAAATTGAAAATTATTTAATCAACGATAAAGTTCTAGATGCACTGAAATGGCTTTCGGCATCGATAGATGCACCATAGACATTATATTAGTCTGTACAATGATCACCTTAATTGGTTAATTAGCCATTGTTCTATCCATGGTTGAAGCTAACCGTTAATGCATAAAGTGCAGTGTGATGTACAGTCTTTTCTGGATTGTAAATTGTATTACTTTGCTAGAAATGTAATATTCATGTGAACTCTGTTCTATTAGTCTATTAGAGCTCCATAACTTAGTTCTGATTGGAATGCTAATATTATACCATTTTGGTTGATACTGGAACTATTTAGAGTCTCAAACTCAAGAGTCCAGTCAGTCTCAACAATTTATTGTTTTCTGAACGCACAAAGCTCTTATGTTGCCTTTGGTCTCTAGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTGTGAATGTGCATCTGATGCCGACATCAAGAAAAACGAGAATACATTTTCAGCGTCACCAGTGGCTGATGGCAAGGTTAGTAACTATTAACTGTTGCTTCCTACATAGAATGGTAGTTGAATATGCATCTTTGCCAGCGTATTAAGCTTTTCTATTCACGTCAGATACCTCTTTTTCTTTTCCGATGTATTTAAAGGTTAACTCAGTAGCTCAAGTACAGATAAGAAGACAAATGAAATACACGCAATGTTTGGCATTAGTCAATGCTAAATGTCCAGACCTTCAGTGTGGTCCCTTTCCAATCACTTCAGTCTTGTTTTAATTAATTAACTTTGAAGGTTTTTCTTTTGATTCATGTGCTATTTGTTTTCCGAAAGCCTGTCTCATGTTTCTTAAACGTCGGTCATTGGGCTTACTTTTTGCTGATAATTGATTTCAAAATAATTGTCTACTTTCACATGTCTAATGAATAATCAGGTGCTGTTGTTATGTGTTTGGTGATTTTATCCTAAATGGTTTGTCAAATTTCTTCTAATAACTTTTACTTTTACTGTAGGTTTTGTTTAAATTAGAATGCACACTCATTAGAAATAATTTTATACCAGAATATCTGGTTTTGTTTTCTGAATACGCCAAATATTCCTCTTAGCTGAAGAACTTTTCTGACAGCTACATAAAACATGTCTGCATGTATGATATGAAAGAGTTCAGAGTTTTTTTGTCCGATCGATTCATCAATGAACAGATTATTTTTTCATAATAATTATGAAAATATCAGTTCCTTATTTTCAAATGTCATCTTTTTTAGGCTTGTCCATGTCATATTGGTCAATTCTTTTGTTGTTTCTATATATTTTTTCAACTTTCTAGCCCATGTTGTTGCAAAAGACCCCATGATCCATCCAGCTAAGGAGGACATCATTCGTTGGGAGGCAACCCTTCCCGAAAGTAAAAGGCTCAAAATATTAAAAGTACTGGAATCTCCCCTACCCCCACCTCCTTTGGATAAAATCATTGCTTTCTTATCTGTCAATGCAAGTACATTATTATCATGACACCCTTTATCATGCCTACCATTCTAGATTTGTGCTGTATCGTGTAAGCAAGCTTTTCCAATACCTTAGTTCCTTCTAAGTTCAAGGAGGTAGTTTATTTGGAAAAATCAATACTCCTTTTGGTTTTTTGATTTTCAGACATGTGGGGTGCATGGGAACGCTGTTATTGATGTGGTGAGAAATGTAATTTGCTTTATATGGTCTGAAAAAGATGTCTTTTTGATTTGAAAAGTCATCTATCATCAAACATTAAGACATTTATGTTGCTTCAAAATTTTAGATTAAATTTCAAGTTTATTCATTGAACTTTAAAGGTTGTGTATGATTTCAGTTCTGTTTAAATTCTGACATATAAAAATGTTTAACTGATCTTTTAACAATCAATTTTTACCTATCTTTGTGCTTGATTAGTACGATTCATATTCAACTTTTCCTTTTTTTGTTTCAAATTTCCAAATCTATAAGACATAAAATTCTTAAATGACAGAAAACTTTTCAATTTTTAGTTCAGTAAACAGATTTGTAGAACTGTCGAACTAGACAAGTACTTATTTGACGCAAAAGTAAATTCATGACCTGCACTATTGAGTAATATGCATTTAATTCCTTTTTGGTACATTATTTGTTATAGTTTCATGGTCATTGGAAGTTTGTCCCTTTCAAGACCAACTTCTCAGTATCATTGAAAAGCCCCACCCTCCAGTACACATCCATTTTCGCCATTTTGTCTCTGAACCTTGTCCAGCTACAAGTATAGTAATCTCTGACAGTAGATGTTTCAGGCAGATAAGAATCAATAAAACATAGAAGAATCAACTTCCCTCATGGACAAAACTACGAGTCCTGCCTGTTTGAGGAAGATAACAATCTCATCAGTCGCTTTGAGTTCTGTTTCTCTAATGAGTTCTACTAACATAAAGTTCGTTATTGGTTGCAGCTCGAGTCTAAGCGGCGGAAGAGATAACCACAGCAGGTGGAATTCTTTGTTGGATTCAACCATGGCAGATATGGAGAGTTCAATTGTTATTTATGTAGGTGGTGTATAGCATAGCTTGGACTTTGCTGTGTAAAACTTCTGTTTTGTGACTGAAGTTATATATATGTGTGTATGATGTAGTAATATATGTAGTAGTAGGGGCTCGGAAAGTTTCTCCATAACAGTTCAGGCTAGTCTTGTTGTATCATTTTGGAACATTTAATGTGATTTGGGGACACTAGAAAGTGGAAACAGAAATTTTAGAGGTTGCTGAAAATGTTCAATTCTAAGTTTACATATGAGCTTG CAAACTTCCAACGTACGTGTGAATGTAAAAGGTCGCGATTGCGCTCCAAAGAAGGCGTCAGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTAATCATGGTGAGCTACAGCTAGGGTTTCTGTTCTTCCCCCAATTTCTAGGGCTTCTTCCTTCTCCATTTCTACTCTCATTTCTCCCATTGCTTCCTCACTCATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACTAGTAAGCTCCCGTATGTAGCGCGCGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGCGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGTAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTCGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAAGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTGTGAATGTGCATCTGATGCCGACATCAAGAAAAACGAGAATACATTTTCAGCGTCACCAGTGGCTGATGGCAAGCTCGAGTCTAAGCGGCGGAAGAGATAACCACAGCAGGTGGAATTCTTTGTTGGATTCAACCATGGCAGATATGGAGAGTTCAATTGTTATTTATGTAGGTGGTGTATAGCATAGCTTGGACTTTGCTGTGTAAAACTTCTGTTTTGTGACTGAAGTTATATATATGTGTGTATGATGTAGTAATATATGTAGTAGTAGGGGCTCGGAAAGTTTCTCCATAACAGTTCAGGCTAGTCTTGTTGTATCATTTTGGAACATTTAATGTGATTTGGGGACACTAGAAAGTGGAAACAGAAATTTTAGAGGTTGCTGAAAATGTTCAATTCTAAGTTTACATATGAGCTTG ATGGCCAAAACCAGACCTCCCAAGAAAGACTTGGACTCTTACACCATCAGAGGCACCAACAAGGTCGTTAGAGTTGGAGATTGTGTTCTGATGCGCCCATCGGAAACTAGTAAGCTCCCGTATGTAGCGCGCGTTGAGAAGATCGAAGCTGATAACCGGAACAACATTAAAGTTCGCGTCAGGTGGTATTATCGACCAGAGGAGTCGATTGGGGGCCGTAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTCGTCTGACCACTACGATGTCCAGAGTGCTCACACCATTGAAGGGAAGTGCATTGTTCATTCCTTTAAGAACTATACTAAGCTTGACAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGACCGAGTTGCTGTCTATTGCAAATGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAAGACTGGTATCATCCTGCTTGTGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTGTGAATGTGCATCTGATGCCGACATCAAGAAAAACGAGAATACATTTTCAGCGTCACCAGTGGCTGATGGCAAGCTCGAGTCTAAGCGGCGGAAGAGATAA MAKTRPPKKDLDSYTIRGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFSSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCCECASDADIKKNENTFSASPVADGKLESKRRKR
BLAST of ClCG01G009700 vs. Swiss-Prot
Match: EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1) HSP 1 Score: 380.6 bits (976), Expect = 1.2e-104 Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 1
BLAST of ClCG01G009700 vs. Swiss-Prot
Match: SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 5.7e-75 Identity = 135/214 (63.08%), Postives = 157/214 (73.36%), Query Frame = 1
BLAST of ClCG01G009700 vs. Swiss-Prot
Match: EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana GN=At4g04260 PE=3 SV=2) HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73 Identity = 135/190 (71.05%), Postives = 153/190 (80.53%), Query Frame = 1
BLAST of ClCG01G009700 vs. Swiss-Prot
Match: BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 SV=3) HSP 1 Score: 72.4 bits (176), Expect = 6.8e-12 Identity = 43/132 (32.58%), Postives = 63/132 (47.73%), Query Frame = 1
BLAST of ClCG01G009700 vs. Swiss-Prot
Match: BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Bahcc1 PE=2 SV=2) HSP 1 Score: 72.0 bits (175), Expect = 8.9e-12 Identity = 44/132 (33.33%), Postives = 63/132 (47.73%), Query Frame = 1
BLAST of ClCG01G009700 vs. TrEMBL
Match: A0A0A0M145_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701230 PE=4 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 4.5e-119 Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 1
BLAST of ClCG01G009700 vs. TrEMBL
Match: V7AIX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158300g PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 3.3e-114 Identity = 194/216 (89.81%), Postives = 205/216 (94.91%), Query Frame = 1
BLAST of ClCG01G009700 vs. TrEMBL
Match: A0A0S3S9S4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050700 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 4.3e-114 Identity = 194/216 (89.81%), Postives = 205/216 (94.91%), Query Frame = 1
BLAST of ClCG01G009700 vs. TrEMBL
Match: A0A0S3S9M9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G049600 PE=4 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 9.6e-114 Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 1
BLAST of ClCG01G009700 vs. TrEMBL
Match: V7AM06_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G157300g PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-113 Identity = 196/218 (89.91%), Postives = 205/218 (94.04%), Query Frame = 1
BLAST of ClCG01G009700 vs. TAIR10
Match: AT4G22140.1 (AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 380.6 bits (976), Expect = 6.6e-106 Identity = 176/217 (81.11%), Postives = 191/217 (88.02%), Query Frame = 1
BLAST of ClCG01G009700 vs. TAIR10
Match: AT4G39100.1 (AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 282.0 bits (720), Expect = 3.2e-76 Identity = 135/214 (63.08%), Postives = 157/214 (73.36%), Query Frame = 1
BLAST of ClCG01G009700 vs. TAIR10
Match: AT4G04260.1 (AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 265.0 bits (676), Expect = 4.0e-71 Identity = 129/184 (70.11%), Postives = 147/184 (79.89%), Query Frame = 1
BLAST of ClCG01G009700 vs. TAIR10
Match: AT4G23120.1 (AT4G23120.1 Bromo-adjacent homology (BAH) domain-containing protein) HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07 Identity = 31/91 (34.07%), Postives = 48/91 (52.75%), Query Frame = 1
BLAST of ClCG01G009700 vs. TAIR10
Match: AT4G14700.1 (AT4G14700.1 origin recognition complex 1) HSP 1 Score: 52.4 bits (124), Expect = 4.1e-07 Identity = 26/93 (27.96%), Postives = 48/93 (51.61%), Query Frame = 1
BLAST of ClCG01G009700 vs. NCBI nr
Match: gi|659118193|ref|XP_008458992.1| (PREDICTED: protein polybromo-1 [Cucumis melo]) HSP 1 Score: 440.7 bits (1132), Expect = 1.5e-120 Identity = 208/216 (96.30%), Postives = 210/216 (97.22%), Query Frame = 1
BLAST of ClCG01G009700 vs. NCBI nr
Match: gi|449455381|ref|XP_004145431.1| (PREDICTED: protein polybromo-1 [Cucumis sativus]) HSP 1 Score: 435.3 bits (1118), Expect = 6.4e-119 Identity = 205/216 (94.91%), Postives = 207/216 (95.83%), Query Frame = 1
BLAST of ClCG01G009700 vs. NCBI nr
Match: gi|593262004|ref|XP_007133181.1| (hypothetical protein PHAVU_011G158300g [Phaseolus vulgaris]) HSP 1 Score: 419.1 bits (1076), Expect = 4.7e-114 Identity = 194/216 (89.81%), Postives = 205/216 (94.91%), Query Frame = 1
BLAST of ClCG01G009700 vs. NCBI nr
Match: gi|950947188|ref|XP_014494625.1| (PREDICTED: protein polybromo-1-like isoform X1 [Vigna radiata var. radiata]) HSP 1 Score: 418.7 bits (1075), Expect = 6.2e-114 Identity = 195/216 (90.28%), Postives = 204/216 (94.44%), Query Frame = 1
BLAST of ClCG01G009700 vs. NCBI nr
Match: gi|950937095|ref|XP_014519991.1| (PREDICTED: protein polybromo-1-like [Vigna radiata var. radiata]) HSP 1 Score: 418.7 bits (1075), Expect = 6.2e-114 Identity = 194/216 (89.81%), Postives = 205/216 (94.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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