Carg27282 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27282
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	chromatin remodeling protein EBS
Location	Cucurbita_argyrosperma_scaffold_385 : 36637 .. 40914 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGGGGTCGGGCTTGCGCTCCAAAGAAGGCGTCAGTCTGGACAGTGTTCATCTTCAACGACGATGAGATTAATGGTGAAGAACTAGGGTTTCTCTTCTTCCCCCAAGTTCTACGGCTCTTCCAATCTCAAAACACCACTCATTTCTCTCTCAAATACTCTCAATTCCTTCCCATTTTCACCACTCTGGCTTCCCTCCCTCACGGATGGCCAAAACCAGACCGCCCAAGAAAGACTTGAACTCTTACACCATCAGAGGCACCAACAAGATCGTTAGAGGTAATCTCCTTCGCTTGCAACTTTCAAAACTTGTTTCGTTTTCCCCCTTTCTCTGTTCGTCTAATGCTGTTCTTTTTTTTTTATTTTTTTTTTTGTAACTTCTGATTTGATGGATTCTGCAGTCGGAGATTGTGTTCTGATGCGCCCGTCGGAAACGAGTAAGCTACCTTATGTAGCGCGCATCGAGAAGATCGAAGCTGATAATCGAAACAATATTAAAGTTCGAGTGAGGTGGTACTATCGGCCGGAGGAGTCGATTGGAGGTCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCGGATCACTACGATGTGCAGAGTGCTCACACCATTGAAGGGAGGTGCACTGTTCACTCATTTAAAAACTACACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCAGACCGAGTTGCTGTGTGAGTTTTCATCTTTTCTGTTGTCTAATGTGTTCTTCTGGTGCAAATTTTTTGAATCGGTTTCTTATGTTTTTTGTTTTTCTCTTGCAGCTATTGCAAATGTGAAATGCCTTACAACCCAGACGACCTCATGGTGCAATGCGAGGGCTGTAAGGACTGGTAAATGTCCATGTTAATTTTGGGAAATTAATGCTTGCTTTTGTGTACTGAATCGCTGATTTCTCTGTTGTATTTGGACTTTCCAGAGCGAAGTGGTTTGTTCATTGCATAATGAACCAAGAGAGTGAGTTTAGGATAACTTTTAAAGTAGTGCTTTAAAGTCGCACACTTTTTTATGAGAACTTTTTGAAAGGAGCACTAGTTAGATACTTCTCACTTTAAAAGTTATTTGAGTGTTCTTAGATTTTTTTTCACAATCACTTTTGGGTTATGTGACCAAACATCATGAACATTAAAGAAGTATTTTTAATTGGTTAAAAGTCAGCTTTATGAAACTCACCCTAAGTTCATATGAATTAACAATTAAAAAATGTTTACTCAAAGATAGAGTTCTAGGTGCACTGAATTTGACTTTGGGCATATGGTCATCTGCAGTTCCTTAACATTCTGACCTCATACATTAGATTAAGCCGTACAAAGGTCACCTTAATCAATTAACTTGGCTATTGTCCTCTCCATAGGTGGGGAAACTAACCCTCAAAGTGCAATGTGATGTACAGTTTTCCATGGATTTTAATTTGTTGTTAGAAATAGAATATTCACTTCAACTCTATAAGAACAAAATAGCTAAGTTCTGATTGGAGTGGTTATATTATATCATTTTGTTTCGTACTGGAACTTGAAAGTCTCGAAGTCAGGAGTTCGGTCTAGCGACGTTGTTTCTTTTTGAAAATACAAAAACTCTTATGTTTCCTTTGGTCTTCAGGTATCATCCGGCTTGCGTAAGTATGACTATCGAGGAAGCAAAAAAGTTGGAGCATTTTGTGTGTTCTGAATGTGCATCTGATGCTGACATCAAGACAAATGAGAATACATTTTCAGCATCACCGGTGGCTGATAGCAAGGTTAGTAACTGTTGTCTGTTACGTATATTGGTAGTTGGATATCAATCATCTTTGTGAGCATATTATCCTTTATGTACTTTTTATTCACGTCAGATGTCTTTTTCTCCTTCCTGGTGAATTTAAAGATTTAACTCAGAAGCATAAGTATAACAAGAAGACAATTGAAATATACAATGTTTGGATTAGTTTATGCTAAATGTGCAGACCATAAGTTTGGTTCATTTCCAATTACAGCAATCATGTTTTCATTTCAAGGTTTTTCTTTCGTTTCACTTTCTACTTCTTTTTTCTTTCCAAAAACCAGTCTTGTGATCATTAACTGCCAGCCATTTGGGTATAATTGTGACAAAAAAATCCTTTGATCCAAGTTAGGAGGACATCATTCGTTGGGAGGCCATCTTCCCAAAAGTTAAGAATCAAAATATTAGTACTGAAATCTTCTCTCTCCCACCCCTCTGGACAAAAAATCAATGCTTTCTTATCTGTCAATGCCAGTTCATTATCAACACGACACCCGTTTGGTTTTTCCATTTTTTGACTTGAGTGCCTGGGAACACTATTATTAATATAGTGCGAAATGTAACTTGCTTTCTATGGTCTGAAAAAATGTTTTTTTTCTTTTTTTTTTTTTTTTAATTTGGATTTAATTCTCTGCTTTTGCCACATCTTTCATTTATTTTTTATTCAACTATATAACAAAAGTGTATAAAGTTGAACGGTATAGCTTTTAAGTTCTGTTATGATACTCTTTTATCTTCTGTTTCCGTTGCTTATCCACATAAAAGGAAATATAGTGCAAGTTATCTTTCATAATGATATCATTTTTTAATGAATCTTCAATTTGATCTAAAGTTAATTTTGATTTGCATTCCTAACACATCAAGGCCATTGCATCCAATGTTTTTTCTTAAGATCGATATTTCCTTTGTCTCAGCTGAAACTCATCTAGCATCTACCATCAAACAATGGGGCATATTTATGTTGCTTCAAAATTTTAGGTTGAATTACAACTTTAGTCTCTCAGCTTTTAAGGCCATGTCTAATATGTTTTGTAGTTCAAGAAGTTCAGGTTTTTAATTTTAAATTTTGTGTAACTTTTGCAGTACAATGCTGAAAATGTTGCAGGTCCCATTTATATTCTATATTTTAAAAAAATTATAGGCCTATAAGACAAAATTCTTACTTGATTATGTACTTTCAACTTTAAATCTAATAGATTAGTGAATTTCACAAAATGTCAAACATGACAAGAATCTATTGGACACAAAATTAAGAGATTTATTAGATACTTTTTAAAGTTAAAAGATACATTCAAATTTAACGTAAATTTTACATTTGTAGTAAAGGGATGAAACTTGTGTAGGTTCATACTTCCACCTCTTGACTGCTAGAGAAATCTGCATTTCAATAATTCCTTTTTAATGCACACCATTAAGTGCTCTCTTTTTCCCGGCCTTCTGAACTAAGTCCTGCATACTTCTTTGTGGGAAGGACAACACTTGTTTTGGGTAAGATGGAAAAGACATACATCAACTTTCAGCACTATCATTAAGCATAGTAGTAAGCATTTCTCGACCGATAGGGAGAGGGGTGCTTTGTTTTCGTTTGCTTAACGCCTCTTAGTTGTTTCACATTGGAAGCTTGTCCATTTCGAAACCTACATCACTAGTTGGAATTTCTGGGAAAATCCCACCTCCAATAGCATCCATTTTCACCATTTTTTCCCGGGACTTTGTCAAGCCATAAGTATTCTAGTAATCTTTGTGACAACAGATGGCTCAGGCAGGTAAGAATATTAATGGAAGATAGATGAAACCGACTTCCCTCACTGACCAAACTACAAGTTCTGCCTGTTTGAGGAAGGGAAGAATCATCAGTTTCTTTAAGATTCCATTTCTTTAATGTATTCTTATATGATGTGTGGTGTAAAACGATTAACCGAAAGTTTGTTATTGCAGCTAGAGTCGAAGCGACAGAAGAGATGACCACGGCCAGTGGGACTCTTTGTTGGGTTCAGCATAGCTTGGACTTTGTTGTGTAAAACTTTTGTATTATGACTGAAGGAAGCTATATGTGTGTGTGTGTGTGTGTGTACTGTGAATGATGTAGTGTAGGTAGGGGTTTAGGGAGTTTCTTAATAACAATTCAGGCTGGTCTTGTTGTATCCTTTTGGTAAACTCTCTCTTCTGTTTCTGTCTTGACAGCTTTTAATGTGATCGAACACTGGAAAGTGGAAACAGAAACTTTAGAGGTTGCTGAAAATGCTCAATTCAAGTCTACACTTATGGACAAATCTGGAGAGGAAAAAAAAATGGAAGTCTCTTCTCTGGTTCTGAACTCTTCTCATTGTATAAACAGCATTTTTATGGGGATGTGAATTTGAATATCCAATCTTAAAAGCAAAAATACTTGTCAAATACTAGGAAGCTCACACTCACTTGTTCTATAAACTTTATATCAAAATCTATTTT

mRNA sequence

AACGGGGTCGGGCTTGCGCTCCAAAGAAGGCGTCAGTCTGGACAGTGTTCATCTTCAACGACGATGAGATTAATGGTGAAGAACTAGGGTTTCTCTTCTTCCCCCAAGTTCTACGGCTCTTCCAATCTCAAAACACCACTCATTTCTCTCTCAAATACTCTCAATTCCTTCCCATTTTCACCACTCTGGCTTCCCTCCCTCACGGATGGCCAAAACCAGACCGCCCAAGAAAGACTTGAACTCTTACACCATCAGAGGCACCAACAAGATCGTTAGAGTCGGAGATTGTGTTCTGATGCGCCCGTCGGAAACGAGTAAGCTACCTTATGTAGCGCGCATCGAGAAGATCGAAGCTGATAATCGAAACAATATTAAAGTTCGAGTGAGGTGGTACTATCGGCCGGAGGAGTCGATTGGAGGTCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCGGATCACTACGATGTGCAGAGTGCTCACACCATTGAAGGGAGGTGCACTGTTCACTCATTTAAAAACTACACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCAGACCGAGTTGCTGTCTATTGCAAATGTGAAATGCCTTACAACCCAGACGACCTCATGGTGCAATGCGAGGGCTGTAAGGACTGGTATCATCCGGCTTGCGTAAGTATGACTATCGAGGAAGCAAAAAAGTTGGAGCATTTTGTGTGTTCTGAATGTGCATCTGATGCTGACATCAAGACAAATGAGAATACATTTTCAGCATCACCGGTGGCTGATAGCAAGATGGCTCAGGCAGGTAAGAATATTAATGGAAGATAGATGAAACCGACTTCCCTCACTGACCAAACTACAAGTTCTGCCTGTTTGAGGAAGGGAAGAATCATCAGTTTCTTTAAGATTCCATTTCTTTAATGTATTCTTATATGATGTGTGGTGTAAAACGATTAACCGAAAGTTTGTTATTGCAGCTAGAGTCGAAGCGACAGAAGAGATGACCACGGCCAGTGGGACTCTTTGTTGGGTTCAGCATAGCTTGGACTTTGTTGTGTAAAACTTTTGTATTATGACTGAAGGAAGCTATATGTGTGTGTGTGTGTGTGTGTACTGTGAATGATGTAGTGTAGCTTTTAATGTGATCGAACACTGGAAAGTGGAAACAGAAACTTTAGAGGTTGCTGAAAATGCTCAATTCAAGTCTACACTTATGGACAAATCTGGAGAGGAAAAAAAAATGGAAGTCTCTTCTCTGGTTCTGAACTCTTCTCATTGTATAAACAGCATTTTTATGGGGATGTGAATTTGAATATCCAATCTTAAAAGCAAAAATACTTGTCAAATACTAGGAAGCTCACACTCACTTGTTCTATAAACTTTATATCAAAATCTATTTT

Coding sequence (CDS)

ATGGCCAAAACCAGACCGCCCAAGAAAGACTTGAACTCTTACACCATCAGAGGCACCAACAAGATCGTTAGAGTCGGAGATTGTGTTCTGATGCGCCCGTCGGAAACGAGTAAGCTACCTTATGTAGCGCGCATCGAGAAGATCGAAGCTGATAATCGAAACAATATTAAAGTTCGAGTGAGGTGGTACTATCGGCCGGAGGAGTCGATTGGAGGTCGGAGGCAGTTCCATGGAGCTAAGGAGCTCTTCTTGTCGGATCACTACGATGTGCAGAGTGCTCACACCATTGAAGGGAGGTGCACTGTTCACTCATTTAAAAACTACACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCAGACCGAGTTGCTGTCTATTGCAAATGTGAAATGCCTTACAACCCAGACGACCTCATGGTGCAATGCGAGGGCTGTAAGGACTGGTATCATCCGGCTTGCGTAAGTATGACTATCGAGGAAGCAAAAAAGTTGGAGCATTTTGTGTGTTCTGAATGTGCATCTGATGCTGACATCAAGACAAATGAGAATACATTTTCAGCATCACCGGTGGCTGATAGCAAGATGGCTCAGGCAGGTAAGAATATTAATGGAAGATAG

Protein sequence

MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEHFVCSECASDADIKTNENTFSASPVADSKMAQAGKNINGR

Homology

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BLAST of Carg27282 vs. NCBI nr
Match: XP_023523848.1 (chromatin remodeling protein EBS-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523849.1 chromatin remodeling protein EBS-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023523850.1 chromatin remodeling protein EBS-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 8.7e-120
Identity = 207/209 (99.04%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRPPKKDL+SYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV
Sbjct: 1   MAKTRPPKKDLDSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSECASDADIKTNENTFSASPVADSK+
Sbjct: 181 FVCSECASDADIKTNENTFSASPVADSKL 209

[Close]

BLAST of Carg27282 vs. NCBI nr
Match: XP_023523847.1 (chromatin remodeling protein EBS-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 439.1 bits (1128), Expect = 8.7e-120
Identity = 207/209 (99.04%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRPPKKDL+SYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV
Sbjct: 1   MAKTRPPKKDLDSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSECASDADIKTNENTFSASPVADSK+
Sbjct: 181 FVCSECASDADIKTNENTFSASPVADSKL 209

[Close]

BLAST of Carg27282 vs. NCBI nr
Match: XP_022954865.1 (chromatin remodeling protein EBS-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 1.1e-119
Identity = 206/209 (98.56%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRPPKKDL+SYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV
Sbjct: 1   MAKTRPPKKDLDSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSECASDAD+KTNENTFSASPVADSK+
Sbjct: 181 FVCSECASDADVKTNENTFSASPVADSKL 209

[Close]

BLAST of Carg27282 vs. NCBI nr
Match: XP_022954862.1 (chromatin remodeling protein EBS-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 1.1e-119
Identity = 206/209 (98.56%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRPPKKDL+SYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV
Sbjct: 1   MAKTRPPKKDLDSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSECASDAD+KTNENTFSASPVADSK+
Sbjct: 181 FVCSECASDADVKTNENTFSASPVADSKL 209

[Close]

BLAST of Carg27282 vs. NCBI nr
Match: XP_022954863.1 (chromatin remodeling protein EBS-like isoform X2 [Cucurbita moschata] >XP_022954864.1 chromatin remodeling protein EBS-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 1.1e-119
Identity = 206/209 (98.56%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRPPKKDL+SYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV
Sbjct: 1   MAKTRPPKKDLDSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSECASDAD+KTNENTFSASPVADSK+
Sbjct: 181 FVCSECASDADVKTNENTFSASPVADSKL 209

[Close]

BLAST of Carg27282 vs. TAIR10
Match: AT4G22140.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 374.8 bits (961), Expect = 3.7e-104
Identity = 171/217 (78.80%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MAKTRP--------PKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADN 60
           MAKTRP         +K+L+SYTI+GTNK+VR GDCVLMRPS+  K PYVAR+EKIEAD 
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLE 120
           RNN+KV  RWYYRPEES+GGRRQFHGAKELFLSDH+DVQSAHTIEG+C VH+FKNYT+LE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACV MTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLEHFVCSECASDADIKTNENTFSASPVADSKM 210
           EEAKKL+HFVC+EC+SD D+K ++N F++SP  D K+
Sbjct: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of Carg27282 vs. TAIR10
Match: AT4G39100.1 (PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 278.9 bits (712), Expect = 2.7e-75
Identity = 127/201 (63.18%), Postives = 155/201 (77.11%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNR-NNIKVR 60
           M K + P+K L SY ++  NK ++ GD VLMR SE  K  YVAR+E IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDH+D QSA TIEG+C VHSF +YTKL++VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 YCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLE 180
           +CRFEY + TGAF PDRV V+CKCEMPYNPDDLMVQCE C +W+HP+C+  TIEEAKK +
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFVCSECASDADIKTNENTFS 201
           +F C EC+       N N+ S
Sbjct: 181 NFYCEECSPQQQNLHNSNSTS 201

[Close]

BLAST of Carg27282 vs. TAIR10
Match: AT4G04260.1 (Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 263.8 bits (673), Expect = 9.1e-71
Identity = 129/179 (72.07%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 31  MRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 90
           MRPS+  K PYVAR+EKIEAD RNN+KV  RWYY PEES GGRRQ HGAKELFLSDH+DV
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60

Query: 91  QSAHTIEGRCTVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPD 150
           QSAHTIEG+C VH+FKNYT+LENVG EDYYC F+YKAATGAFTPDRVAVY KCEMPYN D
Sbjct: 61  QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120

Query: 151 DLMVQCEGCKDWYHPACVSMTIEEAKKLEHFVCSECASDAD-IKTNENTFSASPVADSK 209
           +LM +   C    H ACV +TIEEAKKLEHFVC EC+SD D +K  +N F++S   D K
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 178

[Close]

BLAST of Carg27282 vs. TAIR10
Match: AT4G14700.1 (origin recognition complex 1)

HSP 1 Score: 54.7 bits (130), Expect = 8.4e-08
Identity = 28/93 (30.11%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 41  YVARIEKIEADNRNNIK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGR 100
           + ARIEK+  +  + +  +R RWY  PEE++ GR++ +  +EL+L++ +       +   
Sbjct: 245 WAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRH 304

Query: 101 CTVHSFKNYTKLENVGAEDYYCRFEYKAATGAF 133
           C V   K ++K  N G + + C +EY    G+F
Sbjct: 305 CFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSF 337

[Close]

BLAST of Carg27282 vs. TAIR10
Match: AT4G12620.1 (origin of replication complex 1B)

HSP 1 Score: 52.8 bits (125), Expect = 3.2e-07
Identity = 26/86 (30.23%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 41  YVARIEKIEADNRNNIK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGR 100
           + ARI+K+  +  + +  +R RWY  PEE++ GR+  +  +EL+L++ +       I   
Sbjct: 248 WAARIDKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFADIEMECILRH 307

Query: 101 CTVHSFKNYTKLENVGAEDYYCRFEY 126
           C+V   K ++K  N G + + C +EY
Sbjct: 308 CSVKCPKEFSKASNDGDDVFLCEYEY 333

[Close]

BLAST of Carg27282 vs. Swiss-Prot
Match: sp|F4JL28|EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 6.6e-103
Identity = 171/217 (78.80%), Postives = 193/217 (88.94%), Query Frame = 0


Query: 1   MAKTRP--------PKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADN 60
           MAKTRP         +K+L+SYTI+GTNK+VR GDCVLMRPS+  K PYVAR+EKIEAD 
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLE 120
           RNN+KV  RWYYRPEES+GGRRQFHGAKELFLSDH+DVQSAHTIEG+C VH+FKNYT+LE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACV MTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLEHFVCSECASDADIKTNENTFSASPVADSKM 210
           EEAKKL+HFVC+EC+SD D+K ++N F++SP  D K+
Sbjct: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of Carg27282 vs. Swiss-Prot
Match: sp|Q9FEN9|SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.9e-74
Identity = 127/201 (63.18%), Postives = 155/201 (77.11%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNR-NNIKVR 60
           M K + P+K L SY ++  NK ++ GD VLMR SE  K  YVAR+E IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDH+D QSA TIEG+C VHSF +YTKL++VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 YCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLE 180
           +CRFEY + TGAF PDRV V+CKCEMPYNPDDLMVQCE C +W+HP+C+  TIEEAKK +
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFVCSECASDADIKTNENTFS 201
           +F C EC+       N N+ S
Sbjct: 181 NFYCEECSPQQQNLHNSNSTS 201

[Close]

BLAST of Carg27282 vs. Swiss-Prot
Match: sp|F4JGB7|EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 148/226 (65.49%), Postives = 165/226 (73.01%), Query Frame = 0


Query: 1   MAKTRP----------PKKDLN--SYTIRGTNKIVR-----VGDCVLMRPSETSKLPYVA 60
           MAKTRP           KKD+      I   N IV      VGDCVLMRPS+  K PYVA
Sbjct: 1   MAKTRPGVAFSSKIKLGKKDIKILGREILLGNVIVEVGFFTVGDCVLMRPSDAGKAPYVA 60

Query: 61  RIEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVH 120
           R+EKIEAD RNN+KV  RWYY PEES GGRRQ HGAKELFLSDH+DVQSAHTIEG+C VH
Sbjct: 61  RVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEGKCIVH 120

Query: 121 SFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWY 180
           +FKNYT+LENVG EDYYC F+YKAATGAFTPDRVAVY KCEMPYN D+LM +   C    
Sbjct: 121 TFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSDELM-ELLLCHYRV 180

Query: 181 HPACVSMTIEEAKKLEHFVCSECASDAD-IKTNENTFSASPVADSK 209
           H ACV +TIEEAKKLEHFVC EC+SD D +K  +N F++S   D K
Sbjct: 181 HLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLK 225

[Close]

BLAST of Carg27282 vs. Swiss-Prot
Match: sp|Q9P281|BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC1 PE=1 SV=4)

HSP 1 Score: 72.8 bits (177), Expect = 5.4e-12
Identity = 44/132 (33.33%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 16   IRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQ 75
            +RG  + +RVGDC +   +    LPY+ RIE +     +N+ V+V+W+Y PEE+  G+RQ
Sbjct: 2509 VRG-EETLRVGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQ 2568

Query: 76   FHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKL-ENVGAED----YYCRFEYKAATG 135
              G   L+ S H D     TI  +C V + + Y ++  +   +D    YY    Y   TG
Sbjct: 2569 CDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTG 2628

Query: 136  AF-TPDRVAVYC 142
               T D V + C
Sbjct: 2629 RLVTADGVPILC 2639

[Close]

BLAST of Carg27282 vs. Swiss-Prot
Match: sp|Q3UHR0|BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahcc1 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-12
Identity = 44/132 (33.33%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 16   IRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRVRWYYRPEESIGGRRQ 75
            +RG  + +R+GDC +   +    LPY+ RIE +     +N+ V+V+W+Y PEE+  G+RQ
Sbjct: 2513 VRG-KETLRIGDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQ 2572

Query: 76   FHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKL----ENVGAED-YYCRFEYKAATG 135
              G   L+ S H D     TI  +C V   + Y ++    +    +D YY    Y   TG
Sbjct: 2573 SDGKNALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTG 2632

Query: 136  AF-TPDRVAVYC 142
               T D V V C
Sbjct: 2633 RLVTADGVPVLC 2643

[Close]

BLAST of Carg27282 vs. TrEMBL
Match: tr|A0A1S3C959|A0A1S3C959_CUCME (chromatin remodeling protein EBS OS=Cucumis melo OX=3656 GN=LOC103498243 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 2.4e-113
Identity = 193/209 (92.34%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKT+PPKKDL+SYTIR +NK+VRVGDCVLMRPSETSKLPYVAR+EKIEADNRNNIKVRV
Sbjct: 1   MAKTKPPKKDLDSYTIRASNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEG+C VHSFKNYTKL+NVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKL+H
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSEC SDADIK NEN FSAS VAD K+
Sbjct: 181 FVCSECGSDADIKKNENAFSASSVADGKL 209

[Close]

BLAST of Carg27282 vs. TrEMBL
Match: tr|A0A0A0M145|A0A0A0M145_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701230 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 5.8e-112
Identity = 192/209 (91.87%), Postives = 199/209 (95.22%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKT+PPKKDL+SYTIR TNKIVR GDCVLMRPSETSKLPYVA +EKIEADNRNNIKVRV
Sbjct: 1   MAKTKPPKKDLDSYTIRATNKIVRAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEG+C VHSFKNYTKL+NVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
            RFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKL+H
Sbjct: 121 SRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSEC SD DIK NEN FSASPVAD K+
Sbjct: 181 FVCSECGSDGDIKKNENAFSASPVADGKL 209

[Close]

BLAST of Carg27282 vs. TrEMBL
Match: tr|V7AIX2|V7AIX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G158300g PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-108
Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRP +KDL+SYTIRGTNKIVR GDCVLMRPS+TSK PYVAR+EKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEG+C VHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKL+H
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSEC+SD D+K  + TFSASP AD K+
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKV 209

[Close]

BLAST of Carg27282 vs. TrEMBL
Match: tr|A0A1S3VNN1|A0A1S3VNN1_VIGRR (protein polybromo-1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106777006 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-108
Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRP +KDL+SYTIRGTNKIVR GDCVLMRPS+TSK PYVAR+EKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEG+C VHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKL+H
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSEC+SD D+K  + TFSASP AD K+
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKV 209

[Close]

BLAST of Carg27282 vs. TrEMBL
Match: tr|A0A1S3TLI9|A0A1S3TLI9_VIGRR (protein polybromo-1-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC106756639 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 1.3e-108
Identity = 185/209 (88.52%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 1   MAKTRPPKKDLNSYTIRGTNKIVRVGDCVLMRPSETSKLPYVARIEKIEADNRNNIKVRV 60
           MAKTRP +KDL+SYTIRGTNK+VR GDCVLMRPS+TSK PYVAR+EKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGRCTVHSFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEG+C VHSFKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLEH 180
           CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKL+H
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKTNENTFSASPVADSKM 210
           FVCSEC+SD D+K  + TFSASP AD K+
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKV 209

The following BLAST results are available for this feature:

BLAST of Carg27282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523848.1	8.7e-120	99.04	chromatin remodeling protein EBS-like isoform X2 [Cucurbita pepo subsp. pepo] >X...	[more]
XP_023523847.1	8.7e-120	99.04	chromatin remodeling protein EBS-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954865.1	1.1e-119	98.56	chromatin remodeling protein EBS-like isoform X3 [Cucurbita moschata]	[more]
XP_022954862.1	1.1e-119	98.56	chromatin remodeling protein EBS-like isoform X1 [Cucurbita moschata]	[more]
XP_022954863.1	1.1e-119	98.56	chromatin remodeling protein EBS-like isoform X2 [Cucurbita moschata] >XP_022954...	[more]

BLAST of Carg27282 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22140.1	3.7e-104	78.80	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G39100.1	2.7e-75	63.18	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing prot...	[more]
AT4G04260.1	9.1e-71	72.07	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G14700.1	8.4e-08	30.11	origin recognition complex 1	[more]
AT4G12620.1	3.2e-07	30.23	origin of replication complex 1B	[more]

BLAST of Carg27282 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JL28\|EBS_ARATH	6.6e-103	78.80	Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=...	[more]
sp\|Q9FEN9\|SHL_ARATH	4.9e-74	63.18	Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=...	[more]
sp\|F4JGB7\|EBSL_ARATH	1.1e-73	65.49	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana OX=3702 GN=At4g04...	[more]
sp\|Q9P281\|BAHC1_HUMAN	5.4e-12	33.33	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens OX=9606 GN=BAHCC...	[more]
sp\|Q3UHR0\|BAHC1_MOUSE	7.0e-12	33.33	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus OX=10090 GN=Bahc...	[more]

BLAST of Carg27282 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C959\|A0A1S3C959_CUCME	2.4e-113	92.34	chromatin remodeling protein EBS OS=Cucumis melo OX=3656 GN=LOC103498243 PE=4 SV...	[more]
tr\|A0A0A0M145\|A0A0A0M145_CUCSA	5.8e-112	91.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701230 PE=4 SV=1	[more]
tr\|V7AIX2\|V7AIX2_PHAVU	1.0e-108	89.00	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G158300g PE=4 ...	[more]
tr\|A0A1S3VNN1\|A0A1S3VNN1_VIGRR	1.3e-108	89.00	protein polybromo-1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106777006 P...	[more]
tr\|A0A1S3TLI9\|A0A1S3TLI9_VIGRR	1.3e-108	88.52	protein polybromo-1-like isoform X1 OS=Vigna radiata var. radiata OX=3916 GN=LOC...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR019787	Znf_PHD-finger
IPR001025	BAH_dom
IPR001965	Znf_PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
molecular_function	GO:0003682	chromatin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27282-RA	Carg27282-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 140..187 e-value: 5.3E-10 score: 49.2
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..136 e-value: 4.4E-42 score: 155.8
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 23..135 e-value: 1.9E-23 score: 82.5
IPR001025	Bromo adjacent homology (BAH) domain	PROSITE	PS51038	BAH	coord: 21..136 score: 23.568
None	No IPR available	GENE3D	G3DSA:2.30.30.490		coord: 2..127 e-value: 2.7E-28 score: 100.1
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 57..208
None	No IPR available	PANTHER	PTHR12505:SF39	CHROMATIN REMODELING PROTEIN EBS-RELATED	coord: 57..208 coord: 4..54
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 4..54
None	No IPR available	CDD	cd04714	BAH_BAHCC1	coord: 22..156 e-value: 6.2915E-57 score: 177.979
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 140..188 e-value: 1.1E-10 score: 41.2
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 138..189 score: 9.134
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 128..203 e-value: 8.5E-21 score: 75.1
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 141..186
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	SSF57903	FYVE/PHD zinc finger	coord: 132..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27282	Cla004590	Watermelon (97103) v1	carwmB0113
Carg27282	Csa1G701230	Cucumber (Chinese Long) v2	carcuB0121
Carg27282	MELO3C021722	Melon (DHL92) v3.5.1	carmeB0117
Carg27282	ClCG01G009700	Watermelon (Charleston Gray)	carwcgB0114
Carg27282	CSPI01G34210	Wild cucumber (PI 183967)	carcpiB0126
Carg27282	Cucsa.332660	Cucumber (Gy14) v1	carcgyB0137
Carg27282	CmaCh18G005710	Cucurbita maxima (Rimu)	carcmaB0149
Carg27282	CmoCh18G005480	Cucurbita moschata (Rifu)	carcmoB0158
Carg27282	Lsi02G010720	Bottle gourd (USVL1VR-Ls)	carlsiB102
Carg27282	Cp4.1LG02g09610	Cucurbita pepo (Zucchini)	carcpeB0167
Carg27282	MELO3C021722.2	Melon (DHL92) v3.6.1	carmedB0120
Carg27282	Cla97C01G009910	Watermelon (97103) v2	carwmbB0119
Carg27282	Bhi08G000706	Wax gourd	carwgoB0135

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27282	Cucumber (Gy14) v2	carcgybB0121
Carg27282	Cucumber (Chinese Long) v3	carcucB0130