CmoCh13G004430 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G004430
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Location	Cmo_Chr13 : 5521054 .. 5522948 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTACGTGTGAATGTAAAAGGTCCCGATTGCGCTCCAGAGAAGGCGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTAATGATGACGAGCTAGGGTTTCTGTTCTTCCCCCAATTGCTAGGGCTTTTCAAACGCCGAATTACGACCTTCGTTCTTCACTTCTACTGTCGTATCTCTCAATTCCGTGCTAATTTCGTCACTCTCCCATTGCTCTCTCACTGATGGCCAAAACCAGACCAGGCAAGAAGGACCTGGACGCTTACACCATCACAGGCACCAACAAGGTTGTTAGAGGTAAACTCCTTCGCCTAAAACTACGGAAACTTGTTTCATTTTGCGTTAAATATGCTCTCTCTCTGTCGTTCTACTAGAATGTCGTCCAATGCTGCTTTACGAGTTCTGATTTCGCGGATTTTGCAGTTGGAGATTGTGTGTTGATGCGCCCATCGGAAACGAGTAAGCTTCCGTATGTTGCGCGTGTCGAGAAGATCGAAGCTGATAATCGGAACAACATTAAAGTTCGAGTGAGGTGGTACTATCGACCGGAGGAGTCGATTGGGGGGCGGAGGCAGTTCCATGGTGCTAAGGAGCTCTTCTTGTCTGATCACTACGACGTGCAGAGTGCGCACACCATTGAAGGGAAGTGCATTGTTCATACGTTTAAGAACTATACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGATCGAGTTGCTGTGTGAGCTTTTCACTTTTTTGTTGTATAGAACGGATTCTGGTGCAAATTGCTTGAATGCATTTTGAATGTTCCTGTTTTTTCTTGCAGCTATTGCACCTGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTAAATATTAATGTTAATTCTGGGAACTAATGTTTACTTTTGTGTACTGAATCCCTGAATCCTTTTGTGTATTTGCACATTCCAGAGTGAAATGTATACATAAGTAATTGAAGGTTCGAATTTTTTTGATGCATGGCATAATGAATTAAGAGTGAATTTAGGATAACTTTTAAGGTATTGTTTTAAAGTGGCACACTTTTTTTTTTTTCAACTTTTTGCTAGAAGCACTAATCAAGTGCTTCTCACTTTAAAATTTCTTTTTGAATGTTATTTGATCTTTCAGATCGCTTTTTGCCATGTGACCAAATATCATGGAAATTTTGAAATTAATTTTAATTTGTTAGATGTCAGCTTTATGAACCTCACCTTAAGTTTGTATGAATTAACAATTGAAGAATGTTTAATCAAAGATAAAGTTCTAGATACACTGAAATGGCTTTTAGCATCAATCGATAGATGCACCACAGACATTATTAGTCCATACAACGGTCATCTTAATCGGGGTTAATTAATGTTCTATCCAAAGGTGAAAAAGCTAATCGTCAAAGTGCAATGTGATGTGCAGTCTTTTATGGATTGTAATGTGTTGCTAGAAATGGAATATTCACTCGAACTCTATTCTATTCGAACTCCATAACTTAGTTGTGATTGAAGTGGTTTTGTTATACCATTTTGTTTGATACTGGAACTTTTTAGAGAGTCTCGAACTCGAGAGTTTTCTGGAAGCACAAACCTTTTATGTTTCCTTTGGCCTATAGGTACCATCCTGCTTGCGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTCTGAATGTGCATCCGATGCTGATATCAAGAAAACTGAGAATATATTTTCAGCATCACCGGTGGCCGAGGACAAGGTTAGTACTGTTATCTGTTGCTTCCTAAGTAGAATGGTAGATGAATATGAATCATCTTCTCCAGCATATTAG

mRNA sequence

CGTACGTGTGAATGTAAAAGGTCCCGATTGCGCTCCAGAGAAGGCGTCAGTCTGGATAGTGTTCATCTTCAACGATGATGAGATTAATGATGACGAGCTAGGGTTTCTGTTCTTCCCCCAATTGCTAGGGCTTTTCAAACGCCGAATTACGACCTTCGTTCTTCACTTCTACTGTCGTATCTCTCAATTCCGTGCTAATTTCGTCACTCTCCCATTGCTCTCTCACTGATGGCCAAAACCAGACCAGGCAAGAAGGACCTGGACGCTTACACCATCACAGGCACCAACAAGGTTGTTAGAGTTGGAGATTGTGTGTTGATGCGCCCATCGGAAACGAGTAAGCTTCCGTATGTTGCGCGTGTCGAGAAGATCGAAGCTGATAATCGGAACAACATTAAAGTTCGAGTGAGGTGGTACTATCGACCGGAGGAGTCGATTGGGGGGCGGAGGCAGTTCCATGGTGCTAAGGAGCTCTTCTTGTCTGATCACTACGACGTGCAGAGTGCGCACACCATTGAAGGGAAGTGCATTGTTCATACGTTTAAGAACTATACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGATCGAGTTGCTGTCTATTGCACCTGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTACCATCCTGCTTGCGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTCTGAATGTGCATCCGATGCTGATATCAAGAAAACTGAGAATATATTTTCAGCATCACCGGTGGCCGAGGACAAGGTTAGTACTGTTATCTGTTGCTTCCTAAGTAGAATGGTAGATGAATATGAATCATCTTCTCCAGCATATTAG

Coding sequence (CDS)

ATGGCCAAAACCAGACCAGGCAAGAAGGACCTGGACGCTTACACCATCACAGGCACCAACAAGGTTGTTAGAGTTGGAGATTGTGTGTTGATGCGCCCATCGGAAACGAGTAAGCTTCCGTATGTTGCGCGTGTCGAGAAGATCGAAGCTGATAATCGGAACAACATTAAAGTTCGAGTGAGGTGGTACTATCGACCGGAGGAGTCGATTGGGGGGCGGAGGCAGTTCCATGGTGCTAAGGAGCTCTTCTTGTCTGATCACTACGACGTGCAGAGTGCGCACACCATTGAAGGGAAGTGCATTGTTCATACGTTTAAGAACTATACTAAGCTTGAGAATGTTGGTGCTGAGGATTATTATTGTAGATTTGAGTACAAGGCTGCTACTGGAGCTTTCACGCCTGATCGAGTTGCTGTCTATTGCACCTGTGAGATGCCTTACAACCCAGACGACCTCATGGTGCAGTGTGAGGGCTGCAAGGACTGGTACCATCCTGCTTGCGTAAGCATGACTATCGAGGAAGCAAAAAAATTGGACCATTTTGTGTGTTCTGAATGTGCATCCGATGCTGATATCAAGAAAACTGAGAATATATTTTCAGCATCACCGGTGGCCGAGGACAAGGTTAGTACTGTTATCTGTTGCTTCCTAAGTAGAATGGTAGATGAATATGAATCATCTTCTCCAGCATATTAG

Homology

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BLAST of CmoCh13G004430 vs. Swiss-Prot
Match: EBS_ARATH (Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-105
Identity = 178/217 (82.03%), Postives = 194/217 (89.40%), Query Frame = 1


Query: 1   MAKTRPG--------KKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADN 60
           MAKTRPG        +K+LD+YTI GTNKVVR GDCVLMRPS+  K PYVARVEKIEAD 
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLE 120
           RNN+KV  RWYYRPEES+GGRRQFHGAKELFLSDH+DVQSAHTIEGKCIVHTFKNYT+LE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLDHFVCSECASDADIKKTENIFSASPVAEDKV 210
           EEAKKLDHFVC+EC+SD D+KK++N F++SP  + KV
Sbjct: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

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BLAST of CmoCh13G004430 vs. Swiss-Prot
Match: EBSL_ARATH (Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana GN=At4g04260 PE=3 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 6.1e-75
Identity = 150/228 (65.79%), Postives = 168/228 (73.68%), Query Frame = 1


Query: 1   MAKTRPG----------KKDLDAY--TITGTNKVVRV-----GDCVLMRPSETSKLPYVA 60
           MAKTRPG          KKD+      I   N +V V     GDCVLMRPS+  K PYVA
Sbjct: 1   MAKTRPGVAFSSKIKLGKKDIKILGREILLGNVIVEVGFFTVGDCVLMRPSDAGKAPYVA 60

Query: 61  RVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVH 120
           RVEKIEAD RNN+KV  RWYY PEES GGRRQ HGAKELFLSDH+DVQSAHTIEGKCIVH
Sbjct: 61  RVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDVQSAHTIEGKCIVH 120

Query: 121 TFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWY 180
           TFKNYT+LENVG EDYYC F+YKAATGAFTPDRVAVY  CEMPYN D+LM +   C    
Sbjct: 121 TFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSDELM-ELLLCHYRV 180

Query: 181 HPACVSMTIEEAKKLDHFVCSECASDAD-IKKTENIFSASPVAEDKVS 211
           H ACV +TIEEAKKL+HFVC EC+SD D +K+ +N F++S   + K S
Sbjct: 181 HLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLKPS 227

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BLAST of CmoCh13G004430 vs. Swiss-Prot
Match: SHL_ARATH (Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.4e-71
Identity = 123/188 (65.43%), Postives = 148/188 (78.72%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNR-NNIKVR 60
           M K +  +K L +Y +   NK ++ GD VLMR SE  K  YVARVE IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDH+D QSA TIEGKC VH+F +YTKL++VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 YCRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLD 180
           +CRFEY + TGAF PDRV V+C CEMPYNPDDLMVQCE C +W+HP+C+  TIEEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFVCSECA 188
           +F C EC+
Sbjct: 181 NFYCEECS 188

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BLAST of CmoCh13G004430 vs. Swiss-Prot
Match: BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 SV=3)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 21   KVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAK 80
            + +RVGDC +   +    LPY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G  
Sbjct: 2482 ETLRVGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKN 2541

Query: 81   ELFLSDHYDVQSAHTIEGKCIVHTFKNYTKL-ENVGAED----YYCRFEYKAATGAF-TP 140
             L+ S H D     TI  KC V   + Y ++  +   +D    YY    Y   TG   T 
Sbjct: 2542 ALYQSCHEDENDVQTISHKCQVVAREQYEQMARSRKCQDRQDLYYLAGTYDPTTGRLVTA 2601

Query: 141  DRVAVYC 142
            D V + C
Sbjct: 2602 DGVPILC 2608

[Close]

BLAST of CmoCh13G004430 vs. Swiss-Prot
Match: BAHC1_MOUSE (BAH and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Bahcc1 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-11
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 1


Query: 21   KVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAK 80
            + +R+GDC +   +    LPY+ R+E +     +N+ V+V+W+Y PEE+  G+RQ  G  
Sbjct: 2517 ETLRIGDCAVFLSAGRPNLPYIGRIESLWESWGSNMVVKVKWFYHPEETKLGKRQSDGKN 2576

Query: 81   ELFLSDHYDVQSAHTIEGKCIVHTFKNYTKL----ENVGAED-YYCRFEYKAATGAF-TP 140
             L+ S H D     TI  KC V   + Y ++    +    +D YY    Y   TG   T 
Sbjct: 2577 ALYQSCHEDENDVQTISHKCQVVGREQYEQMMRGRKYQDQQDLYYLAGTYDPTTGRLVTA 2636

Query: 141  DRVAVYC 142
            D V V C
Sbjct: 2637 DGVPVLC 2643

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BLAST of CmoCh13G004430 vs. TrEMBL
Match: A0A0A0M145_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701230 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 1.8e-110
Identity = 190/211 (90.05%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKT+P KKDLD+YTI  TNK+VR GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRV
Sbjct: 1   MAKTKPPKKDLDSYTIRATNKIVRAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVH+FKNYTKL+NVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
            RFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH
Sbjct: 121 SRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC SD DIKK EN FSASPVA+ K+ +
Sbjct: 181 FVCSECGSDGDIKKNENAFSASPVADGKLES 211

[Close]

BLAST of CmoCh13G004430 vs. TrEMBL
Match: V7AIX2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158300g PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 1.2e-109
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNK+VR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC+SD D+KK +  FSASP A+ KV +
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKVDS 211

[Close]

BLAST of CmoCh13G004430 vs. TrEMBL
Match: A0A0S3S9S4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050700 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNK+VR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC+SD D+KK +  FSASP A+ KV +
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKVDS 211

[Close]

BLAST of CmoCh13G004430 vs. TrEMBL
Match: A0A0S3S9M9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G049600 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.6e-109
Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNKVVR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVG+EDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGSEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKV 210
           FVCSEC+SD D+KK +  FSASP A+ KV
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKV 209

[Close]

BLAST of CmoCh13G004430 vs. TrEMBL
Match: V7AM06_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G157300g PE=4 SV=1)

HSP 1 Score: 402.5 bits (1033), Expect = 3.4e-109
Identity = 188/211 (89.10%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNK+VR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDAD--IKKTENIFSASPVAEDKV 210
           FVCSEC+SD D  IKK +  FSASPVA+ KV
Sbjct: 181 FVCSECSSDDDMNIKKPQATFSASPVADGKV 211

[Close]

BLAST of CmoCh13G004430 vs. TAIR10
Match: AT4G22140.1 (AT4G22140.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 383.3 bits (983), Expect = 1.1e-106
Identity = 178/217 (82.03%), Postives = 194/217 (89.40%), Query Frame = 1


Query: 1   MAKTRPG--------KKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADN 60
           MAKTRPG        +K+LD+YTI GTNKVVR GDCVLMRPS+  K PYVARVEKIEAD 
Sbjct: 1   MAKTRPGVASKIKTGRKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADA 60

Query: 61  RNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLE 120
           RNN+KV  RWYYRPEES+GGRRQFHGAKELFLSDH+DVQSAHTIEGKCIVHTFKNYT+LE
Sbjct: 61  RNNVKVHCRWYYRPEESLGGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRLE 120

Query: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTI 180
           NVGAEDYYCRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTI
Sbjct: 121 NVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTI 180

Query: 181 EEAKKLDHFVCSECASDADIKKTENIFSASPVAEDKV 210
           EEAKKLDHFVC+EC+SD D+KK++N F++SP  + KV
Sbjct: 181 EEAKKLDHFVCAECSSDDDVKKSQNGFTSSPADDVKV 217

[Close]

BLAST of CmoCh13G004430 vs. TAIR10
Match: AT4G39100.1 (AT4G39100.1 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 270.0 bits (689), Expect = 1.3e-72
Identity = 123/188 (65.43%), Postives = 148/188 (78.72%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNR-NNIKVR 60
           M K +  +K L +Y +   NK ++ GD VLMR SE  K  YVARVE IE D R ++ KVR
Sbjct: 1   MPKQKAPRKQLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVR 60

Query: 61  VRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDY 120
           VRWYYRPEESIGGRRQFHGAKE+FLSDH+D QSA TIEGKC VH+F +YTKL++VG +D+
Sbjct: 61  VRWYYRPEESIGGRRQFHGAKEVFLSDHFDFQSADTIEGKCKVHSFSSYTKLDSVGNDDF 120

Query: 121 YCRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLD 180
           +CRFEY + TGAF PDRV V+C CEMPYNPDDLMVQCE C +W+HP+C+  TIEEAKK D
Sbjct: 121 FCRFEYNSTTGAFDPDRVTVFCKCEMPYNPDDLMVQCEECSEWFHPSCIGTTIEEAKKPD 180

Query: 181 HFVCSECA 188
           +F C EC+
Sbjct: 181 NFYCEECS 188

[Close]

BLAST of CmoCh13G004430 vs. TAIR10
Match: AT4G04260.1 (AT4G04260.1 Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 265.4 bits (677), Expect = 3.3e-71
Identity = 131/181 (72.38%), Postives = 147/181 (81.22%), Query Frame = 1


Query: 31  MRPSETSKLPYVARVEKIEADNRNNIKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDV 90
           MRPS+  K PYVARVEKIEAD RNN+KV  RWYY PEES GGRRQ HGAKELFLSDH+DV
Sbjct: 1   MRPSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESHGGRRQLHGAKELFLSDHFDV 60

Query: 91  QSAHTIEGKCIVHTFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCTCEMPYNPD 150
           QSAHTIEGKCIVHTFKNYT+LENVG EDYYC F+YKAATGAFTPDRVAVY  CEMPYN D
Sbjct: 61  QSAHTIEGKCIVHTFKNYTRLENVGVEDYYCIFDYKAATGAFTPDRVAVYYKCEMPYNSD 120

Query: 151 DLMVQCEGCKDWYHPACVSMTIEEAKKLDHFVCSECASDAD-IKKTENIFSASPVAEDKV 210
           +LM +   C    H ACV +TIEEAKKL+HFVC EC+SD D +K+ +N F++S   + K 
Sbjct: 121 ELM-ELLLCHYRVHLACVGVTIEEAKKLEHFVCVECSSDEDGVKRFQNGFASSTTNDLKP 180

[Close]

BLAST of CmoCh13G004430 vs. TAIR10
Match: AT4G14700.1 (AT4G14700.1 origin recognition complex 1)

HSP 1 Score: 54.7 bits (130), Expect = 8.9e-08
Identity = 27/93 (29.03%), Postives = 51/93 (54.84%), Query Frame = 1


Query: 41  YVARVEKIEADNRNNIK-VRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGK 100
           + AR+EK+  +  + +  +R RWY  PEE++ GR++ +  +EL+L++ +       +   
Sbjct: 245 WAARIEKLWKEVDDGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRH 304

Query: 101 CIVHTFKNYTKLENVGAEDYYCRFEYKAATGAF 133
           C V   K ++K  N G + + C +EY    G+F
Sbjct: 305 CFVKCPKEFSKASNDGDDVFLCEYEYDVHWGSF 337

[Close]

BLAST of CmoCh13G004430 vs. TAIR10
Match: AT4G23120.1 (AT4G23120.1 Bromo-adjacent homology (BAH) domain-containing protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 31/91 (34.07%), Postives = 50/91 (54.95%), Query Frame = 1


Query: 27  DCVLMRPSETSKLPYVARVEKIEADNRN-NIKVRVRWYYRPEE---SIGGRRQFHGAKEL 86
           D VL+ P +  K PYVA ++ I    +  ++K+ V+W YRPEE      G  +  G+++L
Sbjct: 63  DSVLLVPEDGEK-PYVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKGSRDL 122

Query: 87  FLSDHYDVQSAHTIEGKCIVHTFKNYTKLEN 114
           F S H D   A +++  CIVH  +   ++ N
Sbjct: 123 FYSFHRDEVFAESVKDDCIVHFVQENKQIPN 152

[Close]

BLAST of CmoCh13G004430 vs. NCBI nr
Match: gi|659118193|ref|XP_008458992.1| (PREDICTED: protein polybromo-1 [Cucumis melo])

HSP 1 Score: 412.1 bits (1058), Expect = 6.2e-112
Identity = 193/211 (91.47%), Postives = 201/211 (95.26%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKT+P KKDLD+YTI  +NKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV
Sbjct: 1   MAKTKPPKKDLDSYTIRASNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVH+FKNYTKL+NVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC SDADIKK EN FSAS VA+ K+ +
Sbjct: 181 FVCSECGSDADIKKNENAFSASSVADGKLES 211

[Close]

BLAST of CmoCh13G004430 vs. NCBI nr
Match: gi|449455381|ref|XP_004145431.1| (PREDICTED: protein polybromo-1 [Cucumis sativus])

HSP 1 Score: 406.8 bits (1044), Expect = 2.6e-110
Identity = 190/211 (90.05%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKT+P KKDLD+YTI  TNK+VR GDCVLMRPSETSKLPYVA VEKIEADNRNNIKVRV
Sbjct: 1   MAKTKPPKKDLDSYTIRATNKIVRAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVH+FKNYTKL+NVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKLDNVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
            RFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH
Sbjct: 121 SRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC SD DIKK EN FSASPVA+ K+ +
Sbjct: 181 FVCSECGSDGDIKKNENAFSASPVADGKLES 211

[Close]

BLAST of CmoCh13G004430 vs. NCBI nr
Match: gi|950947188|ref|XP_014494625.1| (PREDICTED: protein polybromo-1-like isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-109
Identity = 187/209 (89.47%), Postives = 197/209 (94.26%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNKVVR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKVVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKV 210
           FVCSEC+SD D+KK +  FSASP A+ KV
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKV 209

[Close]

BLAST of CmoCh13G004430 vs. NCBI nr
Match: gi|593262004|ref|XP_007133181.1| (hypothetical protein PHAVU_011G158300g [Phaseolus vulgaris])

HSP 1 Score: 404.1 bits (1037), Expect = 1.7e-109
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNK+VR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC+SD D+KK +  FSASP A+ KV +
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKVDS 211

[Close]

BLAST of CmoCh13G004430 vs. NCBI nr
Match: gi|950937095|ref|XP_014519991.1| (PREDICTED: protein polybromo-1-like [Vigna radiata var. radiata])

HSP 1 Score: 403.7 bits (1036), Expect = 2.2e-109
Identity = 186/211 (88.15%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 1   MAKTRPGKKDLDAYTITGTNKVVRVGDCVLMRPSETSKLPYVARVEKIEADNRNNIKVRV 60
           MAKTRPG+KDLD+YTI GTNK+VR GDCVLMRPS+TSK PYVARVEKIE DNRNN+KVRV
Sbjct: 1   MAKTRPGRKDLDSYTIRGTNKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRNNVKVRV 60

Query: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHTFKNYTKLENVGAEDYY 120
           RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKC+VH+FKNYTKLENVGAEDYY
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCLVHSFKNYTKLENVGAEDYY 120

Query: 121 CRFEYKAATGAFTPDRVAVYCTCEMPYNPDDLMVQCEGCKDWYHPACVSMTIEEAKKLDH 180
           CRFEYKAATGAFTPDRVAVYC CEMPYNPDDLMVQCEGCKDWYHPACV MTIEEAKKLDH
Sbjct: 121 CRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWYHPACVGMTIEEAKKLDH 180

Query: 181 FVCSECASDADIKKTENIFSASPVAEDKVST 212
           FVCSEC+SD D+KK +  FSASP A+ KV +
Sbjct: 181 FVCSECSSDDDMKKPQATFSASPGADGKVDS 211

The following BLAST results are available for this feature:

BLAST of CmoCh13G004430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EBS_ARATH	1.9e-105	82.03	Chromatin remodeling protein EBS OS=Arabidopsis thaliana GN=EBS PE=1 SV=1	[more]
EBSL_ARATH	6.1e-75	65.79	Chromatin remodeling protein At4g04260 OS=Arabidopsis thaliana GN=At4g04260 PE=3...	[more]
SHL_ARATH	2.4e-71	65.43	Chromatin remodeling protein SHL OS=Arabidopsis thaliana GN=SHL PE=1 SV=1	[more]
BAHC1_HUMAN	1.6e-11	33.07	BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 S...	[more]
BAHC1_MOUSE	2.8e-11	33.07	BAH and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Bahcc1 PE=2 S...	[more]

BLAST of CmoCh13G004430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M145_CUCSA	1.8e-110	90.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701230 PE=4 SV=1	[more]
V7AIX2_PHAVU	1.2e-109	88.15	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G158300g PE=4 SV=1	[more]
A0A0S3S9S4_PHAAN	1.5e-109	88.15	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G050700 PE=...	[more]
A0A0S3S9M9_PHAAN	2.6e-109	89.00	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G049600 PE=...	[more]
V7AM06_PHAVU	3.4e-109	89.10	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G157300g PE=4 SV=1	[more]

BLAST of CmoCh13G004430 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22140.1	1.1e-106	82.03	PHD finger family protein / bromo-adjacent homology (BAH) domain-con...	[more]
AT4G39100.1	1.3e-72	65.43	PHD finger family protein / bromo-adjacent homology (BAH) domain-con...	[more]
AT4G04260.1	3.3e-71	72.38	Bromo-adjacent homology (BAH) domain-containing protein	[more]
AT4G14700.1	8.9e-08	29.03	origin recognition complex 1	[more]
AT4G23120.1	3.4e-07	34.07	Bromo-adjacent homology (BAH) domain-containing protein	[more]

BLAST of CmoCh13G004430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118193\|ref\|XP_008458992.1\|	6.2e-112	91.47	PREDICTED: protein polybromo-1 [Cucumis melo]	[more]
gi\|449455381\|ref\|XP_004145431.1\|	2.6e-110	90.05	PREDICTED: protein polybromo-1 [Cucumis sativus]	[more]
gi\|950947188\|ref\|XP_014494625.1\|	1.7e-109	89.47	PREDICTED: protein polybromo-1-like isoform X1 [Vigna radiata var. radiata]	[more]
gi\|593262004\|ref\|XP_007133181.1\|	1.7e-109	88.15	hypothetical protein PHAVU_011G158300g [Phaseolus vulgaris]	[more]
gi\|950937095\|ref\|XP_014519991.1\|	2.2e-109	88.15	PREDICTED: protein polybromo-1-like [Vigna radiata var. radiata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001025	BAH_dom
IPR001965	Znf_PHD
IPR011011	Znf_FYVE_PHD
IPR013083	Znf_RING/FYVE/PHD
IPR019786	Zinc_finger_PHD-type_CS
IPR019787	Znf_PHD-finger

Vocabulary: **Molecular Function**
Term	Definition
GO:0003682	chromatin binding
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006260	DNA replication
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0000785	chromatin
cellular_component	GO:0042575	DNA polymerase complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G004430.1	CmoCh13G004430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001025	Bromo adjacent homology (BAH) domain	PFAM	PF01426	BAH	coord: 23..135 score: 4.5
IPR001025	Bromo adjacent homology (BAH) domain	SMART	SM00439	BAH_4	coord: 21..136 score: 3.2
IPR001025	Bromo adjacent homology (BAH) domain	PROFILE	PS51038	BAH	coord: 21..136 score: 23
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 140..187 score: 4.6
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 132..190 score: 2.88
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 137..195 score: 6.5
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 141..186 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 140..188 score: 6.1
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 138..189 score: 9
None	No IPR available	PANTHER	PTHR12505	PHD FINGER TRANSCRIPTION FACTOR	coord: 1..169 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G004430	Cucsa.332660	Cucumber (Gy14) v1	cgycmoB0912
CmoCh13G004430	CmaCh13G004150	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G004430	CmaCh18G005710	Cucurbita maxima (Rimu)	cmacmoB398
CmoCh13G004430	Cla004590	Watermelon (97103) v1	cmowmB182
CmoCh13G004430	Csa1G701230	Cucumber (Chinese Long) v2	cmocuB192
CmoCh13G004430	MELO3C021722	Melon (DHL92) v3.5.1	cmomeB179
CmoCh13G004430	ClCG01G009700	Watermelon (Charleston Gray)	cmowcgB177
CmoCh13G004430	CSPI01G34210	Wild cucumber (PI 183967)	cmocpiB196
CmoCh13G004430	Lsi02G010720	Bottle gourd (USVL1VR-Ls)	cmolsiB197
CmoCh13G004430	Cp4.1LG20g06290	Cucurbita pepo (Zucchini)	cmocpeB201
CmoCh13G004430	Cp4.1LG02g09610	Cucurbita pepo (Zucchini)	cmocpeB209
CmoCh13G004430	MELO3C021722.2	Melon (DHL92) v3.6.1	cmomedB201
CmoCh13G004430	CsaV3_1G046090	Cucumber (Chinese Long) v3	cmocucB0225
CmoCh13G004430	Cla97C01G009910	Watermelon (97103) v2	cmowmbB195
CmoCh13G004430	Bhi08G000706	Wax gourd	cmowgoB0246
CmoCh13G004430	CsGy1G032740	Cucumber (Gy14) v2	cgybcmoB061
CmoCh13G004430	Carg25909	Silver-seed gourd	carcmoB0315

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G004430	CmoCh18G005480	Cucurbita moschata (Rifu)	cmocmoB170

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G004430	Cucurbita pepo (Zucchini)	cmocpeB182
CmoCh13G004430	Watermelon (97103) v2	cmowmbB200