Lsi02G001480 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAAGTTCTAAAAATGTAAATTATATAATAATGGGCTATCCTATTCCAACTTAATTTATATTATAGTATGTGATAATAAAAAGGTTTAATTTATATATTTTGTTTTGGTTTCAGGGCAAATTTTTTTTTTAATGACCAATTAAGTTAATAGAAATGACGAAAGACAACGCAGGCTAATTACTAATTAGTTAACATTTTGAAGAGATTTGGGTTAGTTCAAACTCAAGGTGATGTGGAAATGGCTAATCACAATCGAGCTTGTTTAATTATACTTTAGAAATGCAATGGAGCAGGCCAAATTGGGTTATTATTAGGGCTTTTTAATAACAAACTCGGAATGAAAGACACCCAATTATCGCTTTTTTCGTCTCTTTTTAAAAATAAAGAAATAAGGAACCAATTATCAAATTTTCATTATAAAATCTGCTGACTATATATGACCAATTGCAATATGTTAACTATTTATATTTTATTTAATAATTTTGATGTAATTTTAGTATTTTTTTATTTATATTCTTTTTATGGTATTTTAAGTAGGATTATTTATGTTTTTTATCATGAACTATGATGCATTAGGATTTCTTTTATTGAGAGACTATTTAAAGTTTGACCATTGAGAGACTTTTTTTTTTTTTTTTTAATAACAGAATACTAGAGGGAGGGATCAGGAGGTGCACCGGGACATCTCAACCAGGTTGACACCTCCTTAGCACCCTCATCATGCCTTGATACTAATAGCGATATCATTCATATAACAAAAAGTTTGTACAAAGAGCTAGAGGATAGCTCTGTAACAAGAGGAGGTTGGTCAGGAAAATGGGCTAAAAAAACAATTCCAATTTGGGAATGATAATTTTTCTTTTAAGTTGATGACGTCATCAACTCAACATTTGCAATTCTTGATCTAGGGTTGCATGCGAAAGCATTTAGGTAAGATTGATCAACTTGCTTGTAGCCTTGAGTAGAGAATTAGTTCTCCTTATGTCTTGGATCAAAAGCTAATCTAAATCTAATTCTTCTCTTTAGATTGACATCAAATTGATTTGAGAGTTTTAGAATTTTATATTAAAGAGATAAATGAGTTCCTAATTTTTCGAATCGGTAGGATTTTTCATATCAGAATTTGTGAGACAAGATTGTTGAGATACTTTGTTACAAAATGAAGTGAATCTAAATTAATATGACCAAAGCAGATTCTAGAAAGAAAAAACAAATCTTATTAATTCGAGTCATATTAATATTTAATTGAGATAATCCACGCCAATGTTGACCCATTTTAAAGGAACGGTTAAACCAAAAACATCACCACCCCAACTTTATAATATTCTTATTATTATCTTCCAAACAAAGTTAAATTTATTTAATCGAATATTTTACAATTGAAAGTAATAATTGGTTACTTCTCATTAAAAAGCATATTAATAATCCACATTGAACAACTCGTTTTTGATTTGCCATTTACACATACGACCCTTCCAAAGGGTAATTTAACAAACAAAAATGTCCAAATTACTTTACACTAAGTTAAATTATAAAACTTATAATTTAAACTATCACATGCTATTATATAAACTTAGCAATTTGAGGGAGAGGGAACTCACAATTAATAGTATTACCATTCTCACCTTGAAAATCATGATCATTCTTATTAGAAGAATTATAAGTGCTATCAACAACTTTTTTAGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT ATGGATAAAAAATGCAATGGAGCAGGCCAAATTGGGCTAATTACAAACTTCTTTAACACTTCAATATTATTCCAATCCCAATCCAATGACCTAGAAACGGAACCTCGTCACGAGCCGTTGGGCTCATGGCCGCGAACCGCGGCGGAGATAGTAATGCAGTGGGAAAAATTGATGGTTACATTTTGTGTAGGCTCAGCCATTGCCATAGCCACCGTATCTCTTCAAATTGAAACCAGGCTCTCTTTAATGTTTCATTTTCTGTCAGTTGTGTTAATGGGTTGCTTTGTTTTTATAGCCTCAGCCAAAGTCATTAATGTTAAGCAGCAAAGGGTTTCTCAAATTTTGTATTGTTTTGGTGGGTTTTGGTTTGTTACTGCCTTCTTCATTGCCATTGCCATTCCTTATACATTT MDKKCNGAGQIGLITNFFNTSILFQSQSNDLETEPRHEPLGSWPRTAAEIVMQWEKLMVTFCVGSAIAIATVSLQIETRLSLMFHFLSVVLMGCFVFIASAKVINVKQQRVSQILYCFGGFWFVTAFFIAIAIPYTF
BLAST of Lsi02G001480 vs. TrEMBL
Match: A0A0A0LQB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G041520 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.2e-14 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of Lsi02G001480 vs. TrEMBL
Match: A0A0A0LSX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G040520 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-12 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1
BLAST of Lsi02G001480 vs. TrEMBL
Match: A0A0A0LCY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851175 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.1e-11 Identity = 41/88 (46.59%), Postives = 63/88 (71.59%), Query Frame = 1
BLAST of Lsi02G001480 vs. TrEMBL
Match: A0A0A0LQP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G040510 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.9e-07 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
BLAST of Lsi02G001480 vs. TrEMBL
Match: A0A061FYT3_THECC (GTPase IMAP family member 1, putative OS=Theobroma cacao GN=TCM_014409 PE=4 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.8e-07 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1
BLAST of Lsi02G001480 vs. NCBI nr
Match: gi|700208994|gb|KGN64090.1| (hypothetical protein Csa_1G041520 [Cucumis sativus]) HSP 1 Score: 86.3 bits (212), Expect = 4.6e-14 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of Lsi02G001480 vs. NCBI nr
Match: gi|700208993|gb|KGN64089.1| (hypothetical protein Csa_1G040520 [Cucumis sativus]) HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12 Identity = 42/89 (47.19%), Postives = 62/89 (69.66%), Query Frame = 1
BLAST of Lsi02G001480 vs. NCBI nr
Match: gi|700204732|gb|KGN59865.1| (hypothetical protein Csa_3G851175 [Cucumis sativus]) HSP 1 Score: 77.8 bits (190), Expect = 1.6e-11 Identity = 41/88 (46.59%), Postives = 63/88 (71.59%), Query Frame = 1
BLAST of Lsi02G001480 vs. NCBI nr
Match: gi|700208992|gb|KGN64088.1| (hypothetical protein Csa_1G040510 [Cucumis sativus]) HSP 1 Score: 63.2 bits (152), Expect = 4.2e-07 Identity = 37/88 (42.05%), Postives = 54/88 (61.36%), Query Frame = 1
BLAST of Lsi02G001480 vs. NCBI nr
Match: gi|590669147|ref|XP_007037692.1| (GTPase IMAP family member 1, putative [Theobroma cacao]) HSP 1 Score: 62.8 bits (151), Expect = 5.5e-07 Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |