Lsi02G000530 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi02G000530
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	UPF0426 protein At1g28150, chloroplastic
Location	chr02 : 504581 .. 507080 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTCAAATTAAATCAAATGTAGATAAAAACATGGGCATGTTCCTAGTTTTCGAAATGTTTGGTCAATTGCAGGAAGAAAACAAGGCGAATTAAAGCCATTACCTCAATTGGAACGCAAATATCTTCATCCTCTTCTTCCATCATCCTTCAATCAATCAGAAACAGCTCCATTAGCATCATCAGAGATTACCAATGGCCGCTCTTCTTCTTCATTCCTCTTCGACTGCGAGCGTTCTGGTATGTCCATCTCTACTCTTTAATTACTTTCGCTCTTTTCTATAATTTCCCTTTTATTTCTCTTCTTCGATGTTATTGATTTTCCTCTTTGATTCTATTGAAAGTTTGGAGGAGTGGGGAAACTAAAGGGACGGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAACTATCTTAGTCTCGGCTGCAATAATTCTACAAATGGCATCTGCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGTATTCTATTAACTCAATCCCTTCCTGAGTTTTTTCTGTTGTGTTGATTCGCCTAGTTTCTACTTCGATTGAGGTATTGATTGCTGAATATGTTCAAAATATGGAGGATTTAATTAGTTTCCCATCGTATTCCCATAGCACTTAAGAGACAGATTATCTTCGAGTAGAGTTACATACATGGTCGACAAGTGCGAGTTAAGATAATATGGATGGATGGATCTAAGATTTTTCTAGTCATGTCATCTTGAAATTATTAGAACTTCGTAGGACCGTAGGGAAGATTTTCACTGTATAGGAAACCCAATTTAACCATTCTATCTCTCTGATAACTAAAGACTGCATAACATAAGTATTATTCAGTCAACTCTTATGATCTGCAAATAACAATCTCGAATTAACTTCAAAGGAGAAACATTATATGCCTTTATGATCTGGAAGGCTATTTGTTGAGGAAAATGTACGCCTAGAGGATATCTTTAGTTGGCTTTACCTTTTCACAAATCCTTTAAACCATGCTTTCACATTTATGAATCTATATTGGTAACCGTAGAACTAAAATCCTACCAGAAGAAGATAATAAGACAGTTGTTGTATTGGTTTCTTAGTTTACTGCTAGTCTACTACCACAGTGACAGAGCATTCACAGGTGCAGCTAAAAGGTGTACACTACTCTGGCTACTTTTCTCCGAGAAAAAGTCTCCTCTTCTACACTTCTACTTCATTCATTTCATGTTATACAAAAGACTGAAACTAAACACTTTTTACCTTACACCTGCCCTGCTATGATTTTTCTCTCGATTAGAATTCTGCCCATCAATGAAATCTAAGTAGGAACTTTCCCAATGGATGACCACAGGATTGATGAGTCCCGTTCTGGCTGAAAGAATCCAGCATTGGTGTTGCAACACATTTAATTTTGCCTGAAGCCTGATATATCAGGACACTAATTGAATTGTTTGAGTTTGGGAAATGTTTATTCTTCTTCTTGTTTGGTAAGATTGAAATTTGCTAGAAAGCTTACTGACATCTCATCTCCAAGACCCGTCATCTTCATCATGTTGCATTCGCTTTCACACATGATATTGTTTAACTGACCGTTTGGCACTAGGCTCACTTGAGATACCAGTCGTGTTTGGTTTGATTTTTTTAAGTGCTTAAAAACTTTAAACACCTAGAAAGTCAAAAGTTACTGCTATGGAGACTGCTGAAGCCAAAAGTTAAACATCACTTCATTATGCCAAATACATTTCCATAGAATTGAAGCAGTCCCAATTACTTCTTGCGACTAAATATTTGAGAGTTTGTTGGTTTTTCATCATTCATAACTAAATAAGCAATCCCAGTTCAAACTCTTACTGTTGCATGAGCGTTATGATTCTTTGTTGGTACGGTTCTTTCTGGACTATATAGAATAAGATGTTAAGGCTTCGTTAGCTGGGAAGCATGAATTCTTTAGATGAAAACACTCACTTCAATAACTTTGATTTTCCCTTGTGGCTTTTGGAACTGCTCTTTTATAGTTCATATCAAAGATATCGAGTCAAAGTAATTTCAATTGTTGTAGGAGCCAGTTGCCTTCGCAGGTGGGCTATTTGCTGGCCTTCTAAGGCTTGATTTGAACGAAGATCCATTGAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAAGAAGTTGATACTCAAGAATCTGTACAAGAGGATGGCCCGACCGCGATCGAGATTGAATGATCCCATCAATGGACCTAACCTCTTACAGTTCGTTCTTATTTATTCCAATAATATATAAACTGGAAAAGTGGGAATGGATTGATATTTGATTTGATTTAGTATTACTACAGCTACCTTGATTTAAAACAAGAAGTAAATCTGAGTTAGGAGTTAACCATTTTTCATATCCAGATTTAGGAGGAAACACGTCATTAGTGTTTTGAATTAATTAATTGTTCAAGTTGAATTAATATCTTTTTGTGATAATTTATT

mRNA sequence

GTGTCAAATTAAATCAAATGTAGATAAAAACATGGGCATGTTCCTAGTTTTCGAAATGTTTGGTCAATTGCAGGAAGAAAACAAGGCGAATTAAAGCCATTACCTCAATTGGAACGCAAATATCTTCATCCTCTTCTTCCATCATCCTTCAATCAATCAGAAACAGCTCCATTAGCATCATCAGAGATTACCAATGGCCGCTCTTCTTCTTCATTCCTCTTCGACTGCGAGCGTTCTGTTTGGAGGAGTGGGGAAACTAAAGGGACGGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAACTATCTTAGTCTCGGCTGCAATAATTCTACAAATGGCATCTGCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGAGCCAGTTGCCTTCGCAGGTGGGCTATTTGCTGGCCTTCTAAGGCTTGATTTGAACGAAGATCCATTGAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAAGAAGTTGATACTCAAGAATCTGTACAAGAGGATGGCCCGACCGCGATCGAGATTGAATGATCCCATCAATGGACCTAACCTCTTACAGTTCGTTCTTATTTATTCCAATAATATATAAACTGGAAAAGTGGGAATGGATTGATATTTGATTTGATTTAGTATTACTACAGCTACCTTGATTTAAAACAAGAAGTAAATCTGAGTTAGGAGTTAACCATTTTTCATATCCAGATTTAGGAGGAAACACGTCATTAGTGTTTTGAATTAATTAATTGTTCAAGTTGAATTAATATCTTTTTGTGATAATTTATT

Coding sequence (CDS)

ATGGCCGCTCTTCTTCTTCATTCCTCTTCGACTGCGAGCGTTCTGTTTGGAGGAGTGGGGAAACTAAAGGGACGGAATCATCATTCGATTTTATCATCCAACAAACCTATGCGCGGTAACTATCTTAGTCTCGGCTGCAATAATTCTACAAATGGCATCTGCGCATTTTTCTTCAATCCTGTTGAGGATCCCGTTATCAAAGAAGCTCTTAAGGAGCCAGTTGCCTTCGCAGGTGGGCTATTTGCTGGCCTTCTAAGGCTTGATTTGAACGAAGATCCATTGAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTCACGGAAGAAGTTGATACTCAAGAATCTGTACAAGAGGATGGCCCGACCGCGATCGAGATTGAATGA

Protein sequence

MAALLLHSSSTASVLFGGVGKLKGRNHHSILSSNKPMRGNYLSLGCNNSTNGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQESVQEDGPTAIEIE

Homology

[Close]

BLAST of Lsi02G000530 vs. Swiss-Prot
Match: Y1815_ARATH (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.4e-18
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 1


Query: 58  FNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE---VDTQ 117
           FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+TEE    D  
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 ESVQEDGPTAIEIE 129
            S  ED P  IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of Lsi02G000530 vs. Swiss-Prot
Match: Y294_SYNY3 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 27/67 (40.30%), Postives = 46/67 (68.66%), Query Frame = 1


Query: 64  PVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTE--EVDTQESVQEDG 123
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D  ++ Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQK----QGVTDFSGADINQTAQDNR 67

Query: 124 PTAIEIE 129
           P +I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of Lsi02G000530 vs. TrEMBL
Match: A0A0A0LT92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-53
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGGVGKLKGRNHHSILSSNKPMRGNYLSLGCNNSTNGICAFFFNP 60
           MAALLLHSSSTASVLFG +GKLKGRNH+SILSS KP+R ++  LG NNSTNGI AFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQESVQED 120
           V DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQ SVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTAIEIE 129
           GPT IEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Lsi02G000530 vs. TrEMBL
Match: A0A0B2Q4P7_GLYSO (UPF0426 protein, chloroplastic OS=Glycine soja GN=glysoja_020920 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 47  NNSTNGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG 106
           N + NG+ AFFFNP +DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEWV +TVE+AG
Sbjct: 49  NGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 108

Query: 107 LT-EEVDTQESVQEDGPTAIEIE 129
           ++ EE +T+ES  E+ P  I+IE
Sbjct: 109 ISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of Lsi02G000530 vs. TrEMBL
Match: C6T1Y8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G174200 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.1e-23
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 47  NNSTNGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG 106
           N + NG+ AFFFNP +DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEWV +TVE+AG
Sbjct: 49  NGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 108

Query: 107 LT-EEVDTQESVQEDGPTAIEIE 129
           ++ EE +T+ES  E+ P  I+IE
Sbjct: 109 ISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of Lsi02G000530 vs. TrEMBL
Match: A0A151RKI5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_035514 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.9e-23
Identity = 54/79 (68.35%), Postives = 66/79 (83.54%), Query Frame = 1


Query: 51  NGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-E 110
           NG+ AFFFNP +DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEWV +TVE AG+T E
Sbjct: 15  NGVKAFFFNPAQDPIVKEALKEPVAFFGGMFAGILRLDLNEEPLKEWVTRTVEGAGITEE 74

Query: 111 EVDTQESVQEDGPTAIEIE 129
           E +T+ES  E  P  I+IE
Sbjct: 75  ETNTEESANEAAPQEIQIE 93

[Close]

BLAST of Lsi02G000530 vs. TrEMBL
Match: A0A0S3SPR6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G150600 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-22
Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 51  NGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-E 110
           NG+ AFFFNP +DP++K+ALKEPVAF GG+FAG+LRLDLNEDPLKEWV +TVE+AG++ E
Sbjct: 48  NGVKAFFFNPEQDPIVKDALKEPVAFLGGMFAGVLRLDLNEDPLKEWVTRTVEAAGISEE 107

Query: 111 EVDTQESVQEDGPTAIEIE 129
           EV+T+ES  E  P  I+IE
Sbjct: 108 EVNTEESTTEAAPLEIQIE 126

[Close]

BLAST of Lsi02G000530 vs. TAIR10
Match: AT1G28150.1 (AT1G28150.1 unknown protein)

HSP 1 Score: 91.7 bits (226), Expect = 3.6e-19
Identity = 45/74 (60.81%), Postives = 57/74 (77.03%), Query Frame = 1


Query: 58  FNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEE---VDTQ 117
           FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+TEE    D  
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 ESVQEDGPTAIEIE 129
            S  ED P  IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of Lsi02G000530 vs. NCBI nr
Match: gi|659066342|ref|XP_008439829.1| (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-55
Identity = 114/128 (89.06%), Postives = 119/128 (92.97%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGGVGKLKGRNHHSILSSNKPMRGNYLSLGCNNSTNGICAFFFNP 60
           MAALLLHSSSTASVLFG +GKLK R+HHSILSS KPMR ++L LG NNSTNGI AFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQESVQED 120
           VEDPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQ SVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTAIEIE 129
           GPT IEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Lsi02G000530 vs. NCBI nr
Match: gi|449439251|ref|XP_004137400.1| (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGGVGKLKGRNHHSILSSNKPMRGNYLSLGCNNSTNGICAFFFNP 60
           MAALLLHSSSTASVLFG +GKLKGRNH+SILSS KP+R ++  LG NNSTNGI AFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQESVQED 120
           V DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQ SVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTAIEIE 129
           GPT IEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of Lsi02G000530 vs. NCBI nr
Match: gi|351720927|ref|NP_001235401.1| (uncharacterized protein LOC100500510 [Glycine max])

HSP 1 Score: 116.7 bits (291), Expect = 3.0e-23
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 47  NNSTNGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG 106
           N + NG+ AFFFNP +DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEWV +TVE+AG
Sbjct: 49  NGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEWVTRTVEAAG 108

Query: 107 LT-EEVDTQESVQEDGPTAIEIE 129
           ++ EE +T+ES  E+ P  I+IE
Sbjct: 109 ISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of Lsi02G000530 vs. NCBI nr
Match: gi|1012331603|gb|KYP43071.1| (hypothetical protein KK1_035514 [Cajanus cajan])

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 54/79 (68.35%), Postives = 66/79 (83.54%), Query Frame = 1


Query: 51  NGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-E 110
           NG+ AFFFNP +DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEWV +TVE AG+T E
Sbjct: 15  NGVKAFFFNPAQDPIVKEALKEPVAFFGGMFAGILRLDLNEEPLKEWVTRTVEGAGITEE 74

Query: 111 EVDTQESVQEDGPTAIEIE 129
           E +T+ES  E  P  I+IE
Sbjct: 75  ETNTEESANEAAPQEIQIE 93

[Close]

BLAST of Lsi02G000530 vs. NCBI nr
Match: gi|965608369|dbj|BAT94860.1| (hypothetical protein VIGAN_08150600 [Vigna angularis var. angularis])

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-22
Identity = 54/79 (68.35%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 51  NGICAFFFNPVEDPVIKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLT-E 110
           NG+ AFFFNP +DP++K+ALKEPVAF GG+FAG+LRLDLNEDPLKEWV +TVE+AG++ E
Sbjct: 48  NGVKAFFFNPEQDPIVKDALKEPVAFLGGMFAGVLRLDLNEDPLKEWVTRTVEAAGISEE 107

Query: 111 EVDTQESVQEDGPTAIEIE 129
           EV+T+ES  E  P  I+IE
Sbjct: 108 EVNTEESTTEAAPLEIQIE 126

The following BLAST results are available for this feature:

BLAST of Lsi02G000530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1815_ARATH	6.4e-18	60.81	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE...	[more]
Y294_SYNY3	3.9e-07	40.30	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ssl02...	[more]

BLAST of Lsi02G000530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT92_CUCSA	1.9e-53	86.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032470 PE=4 SV=1	[more]
A0A0B2Q4P7_GLYSO	2.1e-23	65.06	UPF0426 protein, chloroplastic OS=Glycine soja GN=glysoja_020920 PE=4 SV=1	[more]
C6T1Y8_SOYBN	2.1e-23	65.06	Uncharacterized protein OS=Glycine max GN=GLYMA_10G174200 PE=2 SV=1	[more]
A0A151RKI5_CAJCA	7.9e-23	68.35	Uncharacterized protein OS=Cajanus cajan GN=KK1_035514 PE=4 SV=1	[more]
A0A0S3SPR6_PHAAN	1.0e-22	68.35	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G150600 PE=...	[more]

BLAST of Lsi02G000530 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28150.1	3.6e-19	60.81	unknown protein	[more]

BLAST of Lsi02G000530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066342\|ref\|XP_008439829.1\|	3.0e-55	89.06	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]	[more]
gi\|449439251\|ref\|XP_004137400.1\|	2.8e-53	86.72	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]	[more]
gi\|351720927\|ref\|NP_001235401.1\|	3.0e-23	65.06	uncharacterized protein LOC100500510 [Glycine max]	[more]
gi\|1012331603\|gb\|KYP43071.1\|	1.1e-22	68.35	hypothetical protein KK1_035514 [Cajanus cajan]	[more]
gi\|965608369\|dbj\|BAT94860.1\|	1.5e-22	68.35	hypothetical protein VIGAN_08150600 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi02G000530.1	Lsi02G000530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35996	FAMILY NOT NAMED	coord: 47..128 score: 2.0
None	No IPR available	PANTHER	PTHR35996:SF1	SUBFAMILY NOT NAMED	coord: 47..128 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi02G000530	Csa1G032470	Cucumber (Chinese Long) v2	culsiB022
Lsi02G000530	CSPI01G05390	Wild cucumber (PI 183967)	cpilsiB021
Lsi02G000530	Cucsa.112550	Cucumber (Gy14) v1	cgylsiB148
Lsi02G000530	CmaCh13G011160	Cucurbita maxima (Rimu)	cmalsiB203
Lsi02G000530	CmoCh13G011680	Cucurbita moschata (Rifu)	cmolsiB193
Lsi02G000530	Cla018629	Watermelon (97103) v1	lsiwmB212
Lsi02G000530	MELO3C001965	Melon (DHL92) v3.5.1	lsimeB179
Lsi02G000530	ClCG04G012450	Watermelon (Charleston Gray)	lsiwcgB192
Lsi02G000530	MELO3C001965.2	Melon (DHL92) v3.6.1	lsimedB189
Lsi02G000530	Cla97C04G079440	Watermelon (97103) v2	lsiwmbB184
Lsi02G000530	Bhi08G001634	Wax gourd	lsiwgoB241
Lsi02G000530	Cp4.1LG20g00160	Cucurbita pepo (Zucchini)	cpelsiB424
Lsi02G000530	CsGy1G005140	Cucumber (Gy14) v2	cgyblsiB018
Lsi02G000530	Carg04720	Silver-seed gourd	carlsiB355
Lsi02G000530	CsaV3_1G005250	Cucumber (Chinese Long) v3	cuclsiB022

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi02G000530	Cucurbita maxima (Rimu)	cmalsiB410
Lsi02G000530	Cucurbita moschata (Rifu)	cmolsiB396
Lsi02G000530	Cucurbita pepo (Zucchini)	cpelsiB446