CsGy1G005140 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G005140
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	UPF0426 protein At1g28150, chloroplastic
Location	Chr1 : 3452082 .. 3454421 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTAGCATCATCAGAGATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGGTATGCCCATTTCTACACTCTTCAATTGCTTTCGCTCTTTTCTATTATATTTGCTTCTTATGTCTCTTCTCCGATGTTTTCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGTATCCCATTAACTCGTACATCAAAAACCCTTCCTGGGTTTTGGCTGTTGTGTTCATTCGCTTAGTTTCTTCCTGGATTAAGGTCTTGATTTCTAAGTATGTTCAAAATATGGAGGATTCGATTAATTTCCCATTGTATTCCCATAGCACTTAAAAGACTGATTATCTTCAAGTAGAATTACAAATTTGGTCTACAAGTGCGAGTTGGGATAGATGGATGCATGAATCTAAATTTTTTTTCTAGTCATGTCATGTTGAAAGTATTAGAACTATGTCGGACAGTTGAGTCAGCTTTTTTGATCTGCCAATAATAACCTCGAACTAACTTCAAAGGAGAAAAATTATATCCCTTTATGATCTGGAAGGTTATTTGTTCAGAAAATTGCATAAAGATGTTTATGATTTGTAAACTTTAAGCAATAGAGAACTTCGGCAGGGAGTAATGCACACTTGCAATGGAAATTTTGGCAATTTAGTATTTTCTAACTAGAGGATATCTTTAAGTTGCTTCACTTTCACAAATCCTTTAAAGTTTGAAACCATGTTCTTCACATTTATGAATCTATATTGGTTACCTTGTAGAACCAAAATTCTAGAGGAAGAAGTTAATAAGACAGTTGTTGGATTGGTTTCTTTGTTTCCTGCTACCTCAGTGACAGAGCATTCACAGATTAATCCAAAAGGTGTACGCCACTCTAGCTACTTATCTCCGAGAAAAAACCTCCTCTTATAAAGTTCTACCTGATTCATAATTTCATACCATACAAAAGACTGGAAACTCATTTCACCGTACACCGGCCCCTGCTCAGATTTTCCCCTCAATTGTGTCGCTACACTGCTTGGTTGTTATTCAAATTCTTTCCATCCATGTCTCTAAGTAGGAAATGTTCCAATGGATTCCCTCTAGATTGATGAGTCCTGTTCTGGCTGAAAGAATCCAGTATTGGTGCTTCAACACATTTAGTTCGCTGATTCTTGCCTTGTTATTTAGTAAGATTGAAAGTTGCTAGAAAGCTTACTGTATTAACATCTCATCTCTAAGGCTCGTCGTTGTCACCATGGTGCACTCACTTTCACACTCTGGTATCTTTTAACTAACTATTTGGCACCAGGTTCAGTTGTGAGGATACTGGATGTGTTTGGATAAAGTGCTTACACAATGCAAACAAGCCCATACTGTTGGTTGTTTTACAAAAATTTTACTGCTATAGAGACTGCTGAAATGAAAAGTAAAGACTGTTTACATTTCCATAGAATTGAATCAGTCCCAATCACTTGTTGAGACTGAATGTTTGAGTGTTTATTGGTTTTTCATCATTTATAACTAAATAGGCAAGCCCAGTTCAAACTGTAACCAATGCATTAGGATTCTCTTTTGGCATGGTTCCTTCTGAACTATATAGAATTAGATGTTGAGGCTTCCAATAGCTGGGCCTGGGAGGTATGAATTCTTTAGATGAAAACACTCACTTTACCAACTCCAATTTTTCCATGTCTTTTTGTAGCTCATAATCAAACATATGATGTGAAAGTAAAGTAATTTGACTTGTTGTAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTGTTCCAATAATATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTATATTTAGTTTTTAGTACTTTTTCGACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATA

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTAGCATCATCAGAGATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTGTTCCAATAATATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTATATTTAGTTTTTAGTACTTTTTCGACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATA

Coding sequence (CDS)

ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCTTTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATTGAGATTGAATGA

Protein sequence

MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPTEIEIE

Homology

[Close]

BLAST of CsGy1G005140 vs. NCBI nr
Match: XP_004137400.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus] >KGN63977.1 hypothetical protein Csa_1G032470 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 9.8e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. NCBI nr
Match: XP_008439829.1 (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 3.3e-58
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. NCBI nr
Match: XP_022924196.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata])

HSP 1 Score: 199.5 bits (506), Expect = 6.8e-48
Identity = 103/128 (80.47%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTASVL G MGK +  N +SI S KKP+R++  RLG +NSTNGI AF FNP
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHSIFSPKKPMRANRLRLGCSNSTNGICAFLFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           + DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. NCBI nr
Match: XP_023518976.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.6 bits (501), Expect = 2.6e-47
Identity = 102/128 (79.69%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTASVL G MGK +  N + I S KKP+R++  RLG +NSTNGI AF FNP
Sbjct: 1   MAGLLLHSSSTASVLLGGMGKFREGNRHLIFSPKKPMRANCLRLGCSNSTNGICAFLFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           + DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. NCBI nr
Match: XP_023000721.1 (UPF0426 protein At1g28150, chloroplastic [Cucurbita maxima])

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 101/128 (78.91%), Postives = 109/128 (85.16%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MA LLLHSSSTA VL G MGK +  N +SI S KKP+R++  RLG NNSTN I AF F P
Sbjct: 1   MAGLLLHSSSTACVLLGGMGKFREGNRHSIFSPKKPMRANCLRLGCNNSTNAICAFLFTP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           + DPV+KEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAG+ EEVDTQGSVQED
Sbjct: 61  LEDPVVKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGITEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. TAIR10
Match: AT1G28150.1 (unknown protein)

HSP 1 Score: 92.8 bits (229), Expect = 1.6e-19
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 58  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGS 117
           FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of CsGy1G005140 vs. Swiss-Prot
Match: sp|Q9FZ89|Y1815_ARATH (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g28150 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.9e-18
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 58  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGS 117
           FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of CsGy1G005140 vs. Swiss-Prot
Match: sp|P74786|Y294_SYNY3 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.0e-06
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDG 123
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K    + +G     D   + Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQKQGVTDFSG----ADINQTAQDNR 67

Query: 124 PTEIEIE 129
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of CsGy1G005140 vs. Swiss-Prot
Match: sp|Q8YQ06|Y4034_NOSS1 (UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=asl4034 PE=3 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 9.2e-04
Identity = 21/65 (32.31%), Postives = 35/65 (53.85%), Query Frame = 0


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQEDGPT 123
           P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K          V    + +  GP 
Sbjct: 8   PIFKQLVQHPASFLGGFASGVLRLNLADDPVKSWLDKQRGVNSYSFPVTDAHNGKASGPQ 67

Query: 124 EIEIE 129
            I I+
Sbjct: 68  SISID 72

[Close]

BLAST of CsGy1G005140 vs. TrEMBL
Match: tr|A0A0A0LT92|A0A0A0LT92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 6.5e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. TrEMBL
Match: tr|A0A1S3AZP7|A0A1S3AZP7_CUCME (UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 2.2e-58
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CsGy1G005140 vs. TrEMBL
Match: tr|C6T1Y8|C6T1Y8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100500510 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 0


Query: 38  RSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEW 97
           RS F     N + NG+ AFFFNP  DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEW
Sbjct: 40  RSIFGTGKRNGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEW 99

Query: 98  VKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           V +TVE+AG+  EE +T+ S  E+ P EI+IE
Sbjct: 100 VTRTVEAAGISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of CsGy1G005140 vs. TrEMBL
Match: tr|A0A1S4AYE7|A0A1S4AYE7_TOBAC (UPF0426 protein At1g28150, chloroplastic OS=Nicotiana tabacum OX=4097 GN=LOC107802677 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.9e-22
Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 0


Query: 36  PVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLK 95
           P R+S F    N +   ++AFFFNP+ +P+LK+ALKEPVAFAGG+FAGLLRLDLNEDPLK
Sbjct: 30  PSRTSSFEPHVNPAGFRVNAFFFNPIQEPILKDALKEPVAFAGGIFAGLLRLDLNEDPLK 89

Query: 96  EWVKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           EWV KTVE++G+  EE++T     ED P +IEIE
Sbjct: 90  EWVAKTVEASGITAEEIETSVDQAEDIPQQIEIE 123

[Close]

BLAST of CsGy1G005140 vs. TrEMBL
Match: tr|A0A0S3SPR6|A0A0S3SPR6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G150600 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 2.5e-22
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 0


Query: 43  RLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTV 102
           R G  N  NG+ AFFFNP  DP++K+ALKEPVAF GG+FAG+LRLDLNEDPLKEWV +TV
Sbjct: 41  RTGKRNG-NGVKAFFFNPEQDPIVKDALKEPVAFLGGMFAGVLRLDLNEDPLKEWVTRTV 100

Query: 103 ESAGL-REEVDTQGSVQEDGPTEIEIE 129
           E+AG+  EEV+T+ S  E  P EI+IE
Sbjct: 101 EAAGISEEEVNTEESTTEAAPLEIQIE 126

The following BLAST results are available for this feature:

BLAST of CsGy1G005140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137400.1	9.8e-63	100.00	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus] >KGN63977....	[more]
XP_008439829.1	3.3e-58	94.53	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]	[more]
XP_022924196.1	6.8e-48	80.47	UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]	[more]
XP_023518976.1	2.6e-47	79.69	UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_023000721.1	1.3e-46	78.91	UPF0426 protein At1g28150, chloroplastic [Cucurbita maxima]	[more]

BLAST of CsGy1G005140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28150.1	1.6e-19	63.51	unknown protein	[more]

BLAST of CsGy1G005140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FZ89\|Y1815_ARATH	2.9e-18	63.51	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
sp\|P74786\|Y294_SYNY3	2.0e-06	38.81	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=11117...	[more]
sp\|Q8YQ06\|Y4034_NOSS1	9.2e-04	32.31	UPF0426 protein asl4034 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) ...	[more]

BLAST of CsGy1G005140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT92\|A0A0A0LT92_CUCSA	6.5e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032470 PE=4 SV=1	[more]
tr\|A0A1S3AZP7\|A0A1S3AZP7_CUCME	2.2e-58	94.53	UPF0426 protein At1g28150, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484480...	[more]
tr\|C6T1Y8\|C6T1Y8_SOYBN	1.5e-22	61.96	Uncharacterized protein OS=Glycine max OX=3847 GN=100500510 PE=2 SV=1	[more]
tr\|A0A1S4AYE7\|A0A1S4AYE7_TOBAC	1.9e-22	61.70	UPF0426 protein At1g28150, chloroplastic OS=Nicotiana tabacum OX=4097 GN=LOC1078...	[more]
tr\|A0A0S3SPR6\|A0A0S3SPR6_PHAAN	2.5e-22	65.52	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.08G...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G005140.1	CsGy1G005140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..128
None	No IPR available	PANTHER	PTHR35996	FAMILY NOT NAMED	coord: 1..128
None	No IPR available	PANTHER	PTHR35996:SF1	SUBFAMILY NOT NAMED	coord: 1..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G005140	Cla018629	Watermelon (97103) v1	cgybwmB064
CsGy1G005140	Csa1G032470	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G005140	MELO3C001965	Melon (DHL92) v3.5.1	cgybmeB022
CsGy1G005140	ClCG04G012450	Watermelon (Charleston Gray)	cgybwcgB053
CsGy1G005140	CSPI01G05390	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G005140	CmaCh13G011160	Cucurbita maxima (Rimu)	cgybcmaB064
CsGy1G005140	CmoCh13G011680	Cucurbita moschata (Rifu)	cgybcmoB060
CsGy1G005140	Lsi02G000530	Bottle gourd (USVL1VR-Ls)	cgyblsiB018
CsGy1G005140	Cp4.1LG20g00160	Cucurbita pepo (Zucchini)	cgybcpeB081
CsGy1G005140	MELO3C001965.2	Melon (DHL92) v3.6.1	cgybmedB020
CsGy1G005140	Cla97C04G079440	Watermelon (97103) v2	cgybwmbB053
CsGy1G005140	Bhi08G001634	Wax gourd	cgybwgoB031
CsGy1G005140	Carg04720	Silver-seed gourd	carcgybB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G005140	Cucurbita maxima (Rimu)	cgybcmaB105
CsGy1G005140	Cucurbita moschata (Rifu)	cgybcmoB099
CsGy1G005140	Cucurbita pepo (Zucchini)	cgybcpeB098
CsGy1G005140	Cucumber (Chinese Long) v3	cgybcucB002