CSPI01G05390 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G05390
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	UPF0426 protein, chloroplastic
Location	Chr1 : 3481620 .. 3484289 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATTTGGGTATTTGTTTGGAAATTATTTCCGACAAAAGGGTGGCTGGGAAAATTGAGGCTTTTTTTTCTTTCTTTTTTTTATCGTATATATTTTCATCGGTGGATGTGTGGAATTAAATCTAATGTAGAAAGAACACTACGGGCATGTGGTTGTTTCTCGAAATGTTTGGTCAATTGTAAGAAGAAATGATGACGAATTGAAGCCATTACCTTAATTCCAACGCAAATATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCATCCTTCAATCAATCACAAGCAGCTCTGTTCCATTTGCATCATCAGAGATTAACCCATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGGTATGCCCATTTCTACACTCTTCAATTGCTTTCGCTCTTTTCTATTATATTTGCTTCTTATGTCTCTTCTCCGATGTTTTCGATTTTCTTCTTTGATTCTATTGAAGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCATTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGTATCCCATTAACTCGTACATCAAAAACCCTTCCTGGGTTTTGGCTGTTGTGTTCATTCGCTTAGTTTCTTCCTGGATTAAGGTCTTGATTTCTAAGTATGTTCAAAATATGGAGGATTCGATTAATTTCCCATTGTATTCCCATAGCACTTAAAAGACTGATTATCTTCAAGTAGAATTACAAATTTGGTCTACAAGTGCGAGTTGGGATAGATGGATGCATGAATCTAAATTTTTTTCTAGTCATGTCATGTTGAAAGTATTAGAACTATGTCGGACAGTTGAGTCAGCTTTTTTGATCTGCCAATAATAACCTCGAACTAACTTCAAAGGAGAAAAATTATATCCCCTTTATGATCTGGAAGGTTATTTGTTCAGAAAATTGCATAAAGATGTTTATGATTTGTAAACTTTAAGCAATAGAGAACTTCGGCGGGGAGTAATGCACACTTGCAATGGAAATTTTGGCAATTTAGTATTTTCTAACTAGAGGATATCTTTAATTTGCTTCACTTTCACAAATCCTTTAAAGTTTGAAACCATGTTCTTCACATTTATGAATCTATATTGGTTAGCTTGTAGAACCAAAATTCTAGAGGAAGAAGTTAATAAGACAGTTGTTGGATTGGTTTCTTTGTTTCCTTCTACCTCAGTGACAGAGCATTCACAGATTAATCCAAAAGGTGTACGCCACTCTAGCTACTTATCTCCGAGAAAAAACCTCCTCTTATAAAGTTCTACCTGATTCATAATTTCATACCATACAAAAGACTGGAACTAAACTCATTTCACCGTACACCGGCCCCTGCTCAGATTTTCCCCTCAATTGTGTCGCTACACTGCTTGGTTGTTATTCAAATTCTTTCCATCCATGTCTCTAAGTAGGAAATGTTCCAATGGATTCCCTCTAGATTGATGAGTCCTGTTCTGGCTGAAAGAATCCAGTATTGGTGCTTCAACACATTTAGTTCGCTGATTCTTGCCTTGTTATTTAGTAAGATTGAAAGTTGCTAGAAAGCTTACTGTATTAACATCTCATCTCTAAGGCTCGTCGTTGTCACCATGGTGCACTCACTTTCACACTCTGGTATCTTTTAACTAACTATTTGGCACCAGGTTCAGTTGTGAGGATACTAGATGTGTTTGGATAAAGTGCTTACACAATGCAAACAAGCCCATACTGTTGGTTGTTTTACAAAATTTTTACTGCTATAGAGACTGCTGAAATGAAAAGTAAAGACTGTTTACATTTCCATAGAATTGAATCAGTCCCAATCACTTGTTGAGACTGAATGTTTGAGTGTTTATTGGTTTTTCATCATTTATAACTAAATAGGCAAGCCCAGTTCAAACTGTAACCGATGCATTAGGATTCTCTTTTGGCATGGTTCCTTCTGAACTATATAGAATTAGATGTTGAGGCTTCCAATAGCTGGGCCTGGGAGGTATGAATTCTTTAGATGAAAACACTCACTTTACCAACTCCAATTTTTCCATGTCTTTTTGTAGCTCATAATCAAACATATGATGTGAAAGTAAAGTAATTTGACTTGTTGTAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGATCCCATCATCAATGGATCTAACCTGCTATAGACAATCTTATTTGTTCCAATAATATAAACTGGAAAAGTGGGAATGAAATGATATTTGATTACTATTACCACACCTCCCTTGATTTCCCTTCGACCTCTTTTTTTCTAGTTTGTATTTAGTTTTTAGTACTTTTTCAACTTCTAAATTTGTGGATTCCGATTAAATTATTTACAAAATAGTGTATTGCTAGAAATTGTGGTTAATTATATAAATTGAAGTTCCTAGTTGGTAGATCGTAACTTTATAGTATAATAATG

mRNA sequence

ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCATTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

Coding sequence (CDS)

ATGGCCGCTCTTCTTCTTCACTCCTCTTCTACTGCCAGCGTTCTGTTTGGAGAAATGGGGAAATTAAAGGGACGGAATCATAATTCCATTTTATCATCCAAGAAACCTGTGCGCAGTAGCTTTTTTCGTCTCGGCTCCAACAATTCTACGAATGGCATCTCCGCATTTTTCTTCAACCCAGTTGGGGATCCTGTTCTCAAAGAAGCTCTTAAGGAGCCAGTGGCGTTTGCAGGTGGGCTATTTGCGGGACTTTTAAGGCTTGATTTGAACGAAGATCCACTAAAGGAATGGGTTAAGAAGACAGTGGAATCAGCTGGACTGAGGGAGGAAGTTGATACTCAAGGATCTGTACAAGAGGATGGCCCGACCGAGATCGAGATTGAATGA

Homology

[Close]

BLAST of CSPI01G05390 vs. Swiss-Prot
Match: Y1815_ARATH (UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 1


Query: 58  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGS 117
           FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of CSPI01G05390 vs. Swiss-Prot
Match: Y294_SYNY3 (UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ssl0294 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 26/67 (38.81%), Postives = 43/67 (64.18%), Query Frame = 1


Query: 64  PVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKK--TVESAGLREEVDTQGSVQEDG 123
           PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K    + +G     D   + Q++ 
Sbjct: 8   PVTRELCQQPIAFAGGFVSGVLRLKLTDDPLKKWLQKQGVTDFSG----ADINQTAQDNR 67

Query: 124 PTEIEIE 129
           P  I+I+
Sbjct: 68  PQSIDID 70

[Close]

BLAST of CSPI01G05390 vs. TrEMBL
Match: A0A0A0LT92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032470 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.1e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CSPI01G05390 vs. TrEMBL
Match: A0A0B2Q4P7_GLYSO (UPF0426 protein, chloroplastic OS=Glycine soja GN=glysoja_020920 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.6e-23
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 38  RSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEW 97
           RS F     N + NG+ AFFFNP  DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEW
Sbjct: 40  RSIFGTGKRNGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEW 99

Query: 98  VKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           V +TVE+AG+  EE +T+ S  E+ P EI+IE
Sbjct: 100 VTRTVEAAGISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of CSPI01G05390 vs. TrEMBL
Match: C6T1Y8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G174200 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.6e-23
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 38  RSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEW 97
           RS F     N + NG+ AFFFNP  DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEW
Sbjct: 40  RSIFGTGKRNGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEW 99

Query: 98  VKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           V +TVE+AG+  EE +T+ S  E+ P EI+IE
Sbjct: 100 VTRTVEAAGISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of CSPI01G05390 vs. TrEMBL
Match: A0A0S3SPR6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G150600 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.0e-23
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 43  RLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTV 102
           R G  N  NG+ AFFFNP  DP++K+ALKEPVAF GG+FAG+LRLDLNEDPLKEWV +TV
Sbjct: 41  RTGKRNG-NGVKAFFFNPEQDPIVKDALKEPVAFLGGMFAGVLRLDLNEDPLKEWVTRTV 100

Query: 103 ESAGL-REEVDTQGSVQEDGPTEIEIE 129
           E+AG+  EEV+T+ S  E  P EI+IE
Sbjct: 101 EAAGISEEEVNTEESTTEAAPLEIQIE 126

[Close]

BLAST of CSPI01G05390 vs. TrEMBL
Match: M5WW13_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013417mg PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.0e-22
Identity = 57/95 (60.00%), Postives = 75/95 (78.95%), Query Frame = 1


Query: 36  PVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLK 95
           P  S+  RLG+N+   G++AFFFNP  +P+L+EALKEPVAF GG+FAGLLRLDLNEDPLK
Sbjct: 33  PSSSTKVRLGNND---GVNAFFFNPTEEPILREALKEPVAFMGGMFAGLLRLDLNEDPLK 92

Query: 96  EWVKKTVESAGL-REEVDTQG-SVQEDGPTEIEIE 129
           +WV +TVE++G+  EE+D  G   +E+ P +IEIE
Sbjct: 93  DWVSRTVEASGITEEEIDASGLEPEEEVPLQIEIE 124

[Close]

BLAST of CSPI01G05390 vs. TAIR10
Match: AT1G28150.1 (AT1G28150.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 9.6e-20
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 1


Query: 58  FNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL-REEVDTQGS 117
           FN   +P+L EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++G+  EEVD  G 
Sbjct: 50  FNLPQEPILSEALKEPIAFLGGMFAGLLRLDLNEEPLKDWVTRTVEASGITEEEVDADGV 109

Query: 118 V--QEDGPTEIEIE 129
           V   ED P +IEIE
Sbjct: 110 VSNDEDSPQQIEIE 123

[Close]

BLAST of CSPI01G05390 vs. NCBI nr
Match: gi|449439251|ref|XP_004137400.1| (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 3.0e-63
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED
Sbjct: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CSPI01G05390 vs. NCBI nr
Match: gi|659066342|ref|XP_008439829.1| (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo])

HSP 1 Score: 234.6 bits (597), Expect = 9.9e-59
Identity = 121/128 (94.53%), Postives = 124/128 (96.88%), Query Frame = 1


Query: 1   MAALLLHSSSTASVLFGEMGKLKGRNHNSILSSKKPVRSSFFRLGSNNSTNGISAFFFNP 60
           MAALLLHSSSTASVLFGEMGKLK R+H+SILSSKKP+RSSF RLGSNNSTNGISAFFFNP
Sbjct: 1   MAALLLHSSSTASVLFGEMGKLKARSHHSILSSKKPMRSSFLRLGSNNSTNGISAFFFNP 60

Query: 61  VGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLREEVDTQGSVQED 120
           V DPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGL EEVDTQGSVQED
Sbjct: 61  VEDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTVESAGLTEEVDTQGSVQED 120

Query: 121 GPTEIEIE 129
           GPTEIEIE
Sbjct: 121 GPTEIEIE 128

[Close]

BLAST of CSPI01G05390 vs. NCBI nr
Match: gi|351720927|ref|NP_001235401.1| (uncharacterized protein LOC100500510 [Glycine max])

HSP 1 Score: 115.9 bits (289), Expect = 5.1e-23
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 1


Query: 38  RSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEW 97
           RS F     N + NG+ AFFFNP  DP++KEALKEPVAF GG+FAG+LRLDLNE+PLKEW
Sbjct: 40  RSIFGTGKRNGNRNGVKAFFFNPEQDPIVKEALKEPVAFLGGMFAGILRLDLNEEPLKEW 99

Query: 98  VKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           V +TVE+AG+  EE +T+ S  E+ P EI+IE
Sbjct: 100 VTRTVEAAGISEEEANTEESTTEEAPQEIQIE 131

[Close]

BLAST of CSPI01G05390 vs. NCBI nr
Match: gi|697134808|ref|XP_009621449.1| (PREDICTED: UPF0426 protein At1g28150, chloroplastic [Nicotiana tomentosiformis])

HSP 1 Score: 115.2 bits (287), Expect = 8.7e-23
Identity = 58/94 (61.70%), Postives = 73/94 (77.66%), Query Frame = 1


Query: 36  PVRSSFFRLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLK 95
           P R+S F    N +   ++AFFFNP+ +P+LK+ALKEPVAFAGG+FAGLLRLDLNEDPLK
Sbjct: 30  PSRTSSFEPHVNPAGFRVNAFFFNPIQEPILKDALKEPVAFAGGIFAGLLRLDLNEDPLK 89

Query: 96  EWVKKTVESAGL-REEVDTQGSVQEDGPTEIEIE 129
           EWV KTVE++G+  EE++T     ED P +IEIE
Sbjct: 90  EWVAKTVEASGITAEEIETSVDQAEDIPQQIEIE 123

[Close]

BLAST of CSPI01G05390 vs. NCBI nr
Match: gi|965608369|dbj|BAT94860.1| (hypothetical protein VIGAN_08150600 [Vigna angularis var. angularis])

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 57/87 (65.52%), Postives = 69/87 (79.31%), Query Frame = 1


Query: 43  RLGSNNSTNGISAFFFNPVGDPVLKEALKEPVAFAGGLFAGLLRLDLNEDPLKEWVKKTV 102
           R G  N  NG+ AFFFNP  DP++K+ALKEPVAF GG+FAG+LRLDLNEDPLKEWV +TV
Sbjct: 41  RTGKRNG-NGVKAFFFNPEQDPIVKDALKEPVAFLGGMFAGVLRLDLNEDPLKEWVTRTV 100

Query: 103 ESAGL-REEVDTQGSVQEDGPTEIEIE 129
           E+AG+  EEV+T+ S  E  P EI+IE
Sbjct: 101 EAAGISEEEVNTEESTTEAAPLEIQIE 126

The following BLAST results are available for this feature:

BLAST of CSPI01G05390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1815_ARATH	1.7e-18	63.51	UPF0426 protein At1g28150, chloroplastic OS=Arabidopsis thaliana GN=At1g28150 PE...	[more]
Y294_SYNY3	1.5e-06	38.81	UPF0426 protein ssl0294 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ssl02...	[more]

BLAST of CSPI01G05390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT92_CUCSA	2.1e-63	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G032470 PE=4 SV=1	[more]
A0A0B2Q4P7_GLYSO	3.6e-23	61.96	UPF0426 protein, chloroplastic OS=Glycine soja GN=glysoja_020920 PE=4 SV=1	[more]
C6T1Y8_SOYBN	3.6e-23	61.96	Uncharacterized protein OS=Glycine max GN=GLYMA_10G174200 PE=2 SV=1	[more]
A0A0S3SPR6_PHAAN	8.0e-23	65.52	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G150600 PE=...	[more]
M5WW13_PRUPE	3.0e-22	60.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013417mg PE=4 SV=1	[more]

BLAST of CSPI01G05390 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28150.1	9.6e-20	63.51	unknown protein	[more]

BLAST of CSPI01G05390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449439251\|ref\|XP_004137400.1\|	3.0e-63	100.00	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]	[more]
gi\|659066342\|ref\|XP_008439829.1\|	9.9e-59	94.53	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]	[more]
gi\|351720927\|ref\|NP_001235401.1\|	5.1e-23	61.96	uncharacterized protein LOC100500510 [Glycine max]	[more]
gi\|697134808\|ref\|XP_009621449.1\|	8.7e-23	61.70	PREDICTED: UPF0426 protein At1g28150, chloroplastic [Nicotiana tomentosiformis]	[more]
gi\|965608369\|dbj\|BAT94860.1\|	1.1e-22	65.52	hypothetical protein VIGAN_08150600 [Vigna angularis var. angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0010287	plastoglobule
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G05390.1	CSPI01G05390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35996	FAMILY NOT NAMED	coord: 37..128 score: 2.1
None	No IPR available	PANTHER	PTHR35996:SF1	SUBFAMILY NOT NAMED	coord: 37..128 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G05390	Cla018629	Watermelon (97103) v1	cpiwmB066
CSPI01G05390	Csa1G032470	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G05390	MELO3C001965	Melon (DHL92) v3.5.1	cpimeB024
CSPI01G05390	ClCG04G012450	Watermelon (Charleston Gray)	cpiwcgB059
CSPI01G05390	Lsi02G000530	Bottle gourd (USVL1VR-Ls)	cpilsiB021
CSPI01G05390	MELO3C001965.2	Melon (DHL92) v3.6.1	cpimedB023
CSPI01G05390	Cla97C04G079440	Watermelon (97103) v2	cpiwmbB055
CSPI01G05390	Bhi08G001634	Wax gourd	cpiwgoB034
CSPI01G05390	Cucsa.112550	Cucumber (Gy14) v1	cgycpiB137
CSPI01G05390	CmaCh13G011160	Cucurbita maxima (Rimu)	cmacpiB208
CSPI01G05390	CmoCh13G011680	Cucurbita moschata (Rifu)	cmocpiB195
CSPI01G05390	Cp4.1LG20g00160	Cucurbita pepo (Zucchini)	cpecpiB519
CSPI01G05390	CsGy1G005140	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G05390	Carg04720	Silver-seed gourd	carcpiB0421

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G05390	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G05390	Cucurbita maxima (Rimu)	cmacpiB431
CSPI01G05390	Cucurbita moschata (Rifu)	cmocpiB421
CSPI01G05390	Cucurbita pepo (Zucchini)	cpecpiB535