Lsi01G020480 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi01G020480
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionVQ motif-containing protein, putative
Locationchr01 : 28338279 .. 28338755 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGGAGGCAGCCAAAGTCATGTTGGGTGTAAACCTTTGACAACATTTGTACAGACCGACACGACAACGTTTCGGGAGGTCGTTCAACGTCTCACCGGGCCATCAGAAAGCCACACGACGCCATCGAAGGCAGCTGGATCAAAGAGGCCAACCACAACCTCCAAACTCCATGAAAGGAGACAGTTGACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGCTTACAACTGAGCACCCTAGCTATATTACGAGCCCGGTCGGGACACCATCGAAGATCTTGTCAAAGTTGTCGATTGGGGACGAAGAGAAGGAATTGAATAACATGGAAGAAGAGAAGGCAATCAAAGAAAGGAGATTCTATTTGCATCCATCTCCAAGGTCAATGCCTGTCTATGTACAACCTGAGTTGCTTTCATTATTTCCTTTGGAATCTCCAAAAACAAGTCAGCAACCATGA

mRNA sequence

ATGGAGAAGGGAGGCAGCCAAAGTCATGTTGGGTGTAAACCTTTGACAACATTTGTACAGACCGACACGACAACGTTTCGGGAGGTCGTTCAACGTCTCACCGGGCCATCAGAAAGCCACACGACGCCATCGAAGGCAGCTGGATCAAAGAGGCCAACCACAACCTCCAAACTCCATGAAAGGAGACAGTTGACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGCTTACAACTGAGCACCCTAGCTATATTACGAGCCCGGTCGGGACACCATCGAAGATCTTGTCAAAGTTGTCGATTGGGGACGAAGAGAAGGAATTGAATAACATGGAAGAAGAGAAGGCAATCAAAGAAAGGAGATTCTATTTGCATCCATCTCCAAGGTCAATGCCTGTCTATGTACAACCTGAGTTGCTTTCATTATTTCCTTTGGAATCTCCAAAAACAAGTCAGCAACCATGA

Coding sequence (CDS)

ATGGAGAAGGGAGGCAGCCAAAGTCATGTTGGGTGTAAACCTTTGACAACATTTGTACAGACCGACACGACAACGTTTCGGGAGGTCGTTCAACGTCTCACCGGGCCATCAGAAAGCCACACGACGCCATCGAAGGCAGCTGGATCAAAGAGGCCAACCACAACCTCCAAACTCCATGAAAGGAGACAGTTGACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGCTTACAACTGAGCACCCTAGCTATATTACGAGCCCGGTCGGGACACCATCGAAGATCTTGTCAAAGTTGTCGATTGGGGACGAAGAGAAGGAATTGAATAACATGGAAGAAGAGAAGGCAATCAAAGAAAGGAGATTCTATTTGCATCCATCTCCAAGGTCAATGCCTGTCTATGTACAACCTGAGTTGCTTTCATTATTTCCTTTGGAATCTCCAAAAACAAGTCAGCAACCATGA

Protein sequence

MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTPSKAAGSKRPTTTSKLHERRQLTRPKLQIVKPCPSHFKLTTEHPSYITSPVGTPSKILSKLSIGDEEKELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP
Homology
[Close]
BLAST of Lsi01G020480 vs. Swiss-Prot
Match: VQ31_ARATH (VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-38
Identity = 101/173 (58.38%), Postives = 116/173 (67.05%), Query Frame = 1 

Query: 3   KGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHT---TPS----KAAGSKRPTTT 62
           KG       CKP+TTFVQTDT TFRE+VQRLTGP+E++    TP     K A  KRPT  
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPT-- 63

Query: 63  SKLHERRQLTRPKLQIVKPCPSHFKLTTEHPS-------YITSPVGTPSKILSKLSIGDE 122
           SKLHERRQ  RPKL+IVKP P  FK T   PS        +TSPVGTPS + S LS+ + 
Sbjct: 64  SKLHERRQCMRPKLEIVKP-PLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEG 123

Query: 123 EKE---LNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
           E +    N  EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP +S +P
Sbjct: 124 EPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSGKP 173

[Close]
BLAST of Lsi01G020480 vs. Swiss-Prot
Match: VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 1 

Query: 13  KPLTTFVQTDTTTFREVVQRLTGP----SESHTTPSKAAGSKRPTTTS----KLHERRQL 72
           +P T FVQ D + FR +VQ+LTG     S S  +   AA  K P T      KLHERRQ 
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 73  TRP-KLQIVKPCPSHFKLTTEHPSYITSPVGTPSKILSKL---SIGDEEKELNNMEEEKA 132
           ++  +L++      +   +  H  ++ SPV       +++   S  +E     + EE+KA
Sbjct: 72  SKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKA 131

Query: 133 IKERRFYLHPSPRSMPVYVQPELLSLFPLESP 153
           I E+ FY  PSPRS      PELL LFPL SP
Sbjct: 132 IAEKGFYFLPSPRS-GSEPAPELLPLFPLRSP 162

[Close]
BLAST of Lsi01G020480 vs. Swiss-Prot
Match: VQ4_ARATH (VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 57/183 (31.15%), Postives = 88/183 (48.09%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQ-------------------------RLTGPSESHTTPSKAAGSK 75
           TTFVQ DT++F++VVQ                           + PS     P KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RPTTTS----KLHERRQ-LTRPKLQIVKPC--PSHFKLTTEHPSYIT-SPVGTPSKILSK 135
           + +++S    +L+ERR  +   K+  + P   P +   +   P  ++ S +  PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------IGDEEKELNNME-EEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESP 156
           ++          G   +  N +  EEKA+KER FYLHPSP + P+  +P LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]
BLAST of Lsi01G020480 vs. Swiss-Prot
Match: VQ33_ARATH (VQ motif-containing protein 33 OS=Arabidopsis thaliana GN=VQ33 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-07
Identity = 62/191 (32.46%), Postives = 83/191 (43.46%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQRLTGPS------ESHTTPSKAAGSK----------RPTTTSKLH 75
           TTFVQ DT+TF++VVQ LTG S      + H  PS    +           + T + KL+
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 76  ERRQ------------LTRPKLQIVKPCPSHFKLTTEHPSYITSPVGTPSK---ILS--- 135
           ERRQ            +   +LQ  +        ++ H S   SP  + S    +LS   
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSM 168

Query: 136 ----KLSIGDEEKEL----------------NNMEEEKAIKERRFYLHPSPRSMPVYVQP 153
               KL +      L                N+ EE+KAI ++ FYLHPSP S P   QP
Sbjct: 169 LDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPVSTPRDSQP 228

[Close]
BLAST of Lsi01G020480 vs. Swiss-Prot
Match: VQ13_ARATH (VQ motif-containing protein 13 OS=Arabidopsis thaliana GN=VQ13 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.3e-07
Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQRLTGPSESHT-------------TPSKAAGSKRPTTTSKLHERR 75
           TTF++TD ++F++VVQ LTG  ++ T              P KA  +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  QLTRPKL----------QIVKPCPSHFKLTTEHPS--YITSPVGTPSKILSKLSIGDEEK 135
              +  L          +I+ P   +F      P    ++ P   P       S   + K
Sbjct: 96  NSMKHYLNINPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS---DSK 155

Query: 136 ELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPL 150
              + ++E++IKE+ FYL PSP + P   +P LLSLFP+
Sbjct: 156 PSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPM 191

[Close]
BLAST of Lsi01G020480 vs. TrEMBL
Match: A0A0A0KZ05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 5.3e-69
Identity = 142/156 (91.03%), Postives = 145/156 (92.95%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTPSKAAGSKRPTTTSKLHE 60
           MEKG SQSHVGCKPLTTFVQTDT TFREVVQRLTGPSESHTT SK  GS+RPTTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRQL-TRPKLQIVKPCPSHFKLTT-EHPSYITSPVGTPSKILSKLSIGDEEK-ELNNMEE 120
           RRQL TRPKLQIVKPCPSHFK T  EHPSYITSP+GTPSKILSKLSIGDEEK ELNNMEE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPK 154
           EKAIKERRFYLHPSPRSMP+Y QPELLSLFPLESPK
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPK 156

[Close]
BLAST of Lsi01G020480 vs. TrEMBL
Match: A0A067JK32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 6.5e-43
Identity = 107/170 (62.94%), Postives = 124/170 (72.94%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESH----TTPSKAAGSKRPTTTS 60
           MEK  SQ+  GCKP+TTFVQTDT  FRE+VQRLTGPSES     T  +K AG +RPT  S
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRPT--S 60

Query: 61  KLHERRQLTRPKLQIVKPCPSHFK-----LTTEHPSYITSPVGTPSKILSKLSIGDEE-- 120
           KLHERRQ  RPKL+I+KP P +FK      T+ +PS + SPVGTPS I SKLSI + E  
Sbjct: 61  KLHERRQHLRPKLEIIKP-PVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELEDK 120

Query: 121 -KELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
             ELN+ EEEKAIKERRFYLHPSPRS P Y +P LL+LFPL SP T ++P
Sbjct: 121 ISELNSEEEEKAIKERRFYLHPSPRSRPGYAEPVLLTLFPLRSPTTIEKP 167

[Close]
BLAST of Lsi01G020480 vs. TrEMBL
Match: V4SRC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.5e-43
Identity = 107/174 (61.49%), Postives = 123/174 (70.69%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTP-----SKAAGSKRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T       +K AG KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRQLTRPKLQIVKPC----PSHFKLTTEHPSYITSPVGTPSKILSKLSIGDEEKE 120
           SKLHERRQ TRPKL+IVKP     P      +  PS+  SPVGTPS I +KLSI ++E +
Sbjct: 61  SKLHERRQYTRPKLEIVKPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 L-------NNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
           +       N+ EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP+TS++P
Sbjct: 121 VESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSERP 172

[Close]
BLAST of Lsi01G020480 vs. TrEMBL
Match: A0A067EY24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-42
Identity = 107/174 (61.49%), Postives = 122/174 (70.11%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTP-----SKAAGSKRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T       +K AG KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRQLTRPKLQIVKPC----PSHFKLTTEHPSYITSPVGTPSKILSKLSIGDEEKE 120
           SKLHERRQ TRPKL+IV P     P      +  PS+  SPVGTPS I +KLSI ++E +
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 -------LNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
                  LN+ EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP+TS++P
Sbjct: 121 VESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSERP 172

[Close]
BLAST of Lsi01G020480 vs. TrEMBL
Match: V4LAV0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015866mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-38
Identity = 105/177 (59.32%), Postives = 118/177 (66.67%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTPS------KAAGSKRPTT 60
           M   GSQ+   CKP+TTFVQTDT TFRE+VQRLTGPSES+ T        K A  KRPT 
Sbjct: 1   MNNQGSQNVATCKPVTTFVQTDTNTFREIVQRLTGPSESNATAVPEATVIKTAIQKRPT- 60

Query: 61  TSKLHERRQLTRPKLQIVKPCPSHFKLTTEHPS-------YITSPVGTPSKILSKLSIGD 120
            SKLHERRQ  RPKL+IVKP P  FK T   PS        +TSPVGTPS + S LS+ +
Sbjct: 61  -SKLHERRQCMRPKLEIVKP-PLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIE 120

Query: 121 EEK------ELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
            EK        N  EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP +S +P
Sbjct: 121 GEKGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSGRP 174

[Close]
BLAST of Lsi01G020480 vs. TAIR10
Match: AT5G08480.2 (AT5G08480.2 VQ motif-containing protein)

HSP 1 Score: 161.0 bits (406), Expect = 6.0e-40
Identity = 101/173 (58.38%), Postives = 116/173 (67.05%), Query Frame = 1 

Query: 3   KGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHT---TPS----KAAGSKRPTTT 62
           KG       CKP+TTFVQTDT TFRE+VQRLTGP+E++    TP     K A  KRPT  
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPT-- 63

Query: 63  SKLHERRQLTRPKLQIVKPCPSHFKLTTEHPS-------YITSPVGTPSKILSKLSIGDE 122
           SKLHERRQ  RPKL+IVKP P  FK T   PS        +TSPVGTPS + S LS+ + 
Sbjct: 64  SKLHERRQCMRPKLEIVKP-PLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEG 123

Query: 123 EKE---LNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
           E +    N  EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP +S +P
Sbjct: 124 EPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSPNSSGKP 173

[Close]
BLAST of Lsi01G020480 vs. TAIR10
Match: AT1G80450.1 (AT1G80450.1 VQ motif-containing protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.6e-11
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 1 

Query: 13  KPLTTFVQTDTTTFREVVQRLTGP----SESHTTPSKAAGSKRPTTTS----KLHERRQL 72
           +P T FVQ D + FR +VQ+LTG     S S  +   AA  K P T      KLHERRQ 
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 73  TRP-KLQIVKPCPSHFKLTTEHPSYITSPVGTPSKILSKL---SIGDEEKELNNMEEEKA 132
           ++  +L++      +   +  H  ++ SPV       +++   S  +E     + EE+KA
Sbjct: 72  SKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKA 131

Query: 133 IKERRFYLHPSPRSMPVYVQPELLSLFPLESP 153
           I E+ FY  PSPRS      PELL LFPL SP
Sbjct: 132 IAEKGFYFLPSPRS-GSEPAPELLPLFPLRSP 162

[Close]
BLAST of Lsi01G020480 vs. TAIR10
Match: AT1G28280.1 (AT1G28280.1 VQ motif-containing protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.9e-09
Identity = 57/183 (31.15%), Postives = 88/183 (48.09%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQ-------------------------RLTGPSESHTTPSKAAGSK 75
           TTFVQ DT++F++VVQ                           + PS     P KA  +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RPTTTS----KLHERRQ-LTRPKLQIVKPC--PSHFKLTTEHPSYIT-SPVGTPSKILSK 135
           + +++S    +L+ERR  +   K+  + P   P +   +   P  ++ S +  PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------IGDEEKELNNME-EEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESP 156
           ++          G   +  N +  EEKA+KER FYLHPSP + P+  +P LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]
BLAST of Lsi01G020480 vs. TAIR10
Match: AT5G53830.1 (AT5G53830.1 VQ motif-containing protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 62/191 (32.46%), Postives = 83/191 (43.46%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQRLTGPS------ESHTTPSKAAGSK----------RPTTTSKLH 75
           TTFVQ DT+TF++VVQ LTG S      + H  PS    +           + T + KL+
Sbjct: 49  TTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNKGSSFSIPPIKKTNSFKLY 108

Query: 76  ERRQ------------LTRPKLQIVKPCPSHFKLTTEHPSYITSPVGTPSK---ILS--- 135
           ERRQ            +   +LQ  +        ++ H S   SP  + S    +LS   
Sbjct: 109 ERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRNSSSSENILLSPSM 168

Query: 136 ----KLSIGDEEKEL----------------NNMEEEKAIKERRFYLHPSPRSMPVYVQP 153
               KL +      L                N+ EE+KAI ++ FYLHPSP S P   QP
Sbjct: 169 LDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYLHPSPVSTPRDSQP 228

[Close]
BLAST of Lsi01G020480 vs. TAIR10
Match: AT2G33780.1 (AT2G33780.1 VQ motif-containing protein)

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1 

Query: 16  TTFVQTDTTTFREVVQRLTGPSESHT-------------TPSKAAGSKRPTTTSKLHERR 75
           TTF++TD ++F++VVQ LTG  ++ T              P KA  +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  QLTRPKL----------QIVKPCPSHFKLTTEHPS--YITSPVGTPSKILSKLSIGDEEK 135
              +  L          +I+ P   +F      P    ++ P   P       S   + K
Sbjct: 96  NSMKHYLNINPTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS---DSK 155

Query: 136 ELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPL 150
              + ++E++IKE+ FYL PSP + P   +P LLSLFP+
Sbjct: 156 PSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPM 191

[Close]
BLAST of Lsi01G020480 vs. NCBI nr
Match: gi|700199595|gb|KGN54753.1| (hypothetical protein Csa_4G448640 [Cucumis sativus])

HSP 1 Score: 268.5 bits (685), Expect = 7.6e-69
Identity = 142/156 (91.03%), Postives = 145/156 (92.95%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTPSKAAGSKRPTTTSKLHE 60
           MEKG SQSHVGCKPLTTFVQTDT TFREVVQRLTGPSESHTT SK  GS+RPTTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRQL-TRPKLQIVKPCPSHFKLTT-EHPSYITSPVGTPSKILSKLSIGDEEK-ELNNMEE 120
           RRQL TRPKLQIVKPCPSHFK T  EHPSYITSP+GTPSKILSKLSIGDEEK ELNNMEE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPK 154
           EKAIKERRFYLHPSPRSMP+Y QPELLSLFPLESPK
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPK 156

[Close]
BLAST of Lsi01G020480 vs. NCBI nr
Match: gi|659069434|ref|XP_008449818.1| (PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo])

HSP 1 Score: 260.0 bits (663), Expect = 2.7e-66
Identity = 140/156 (89.74%), Postives = 142/156 (91.03%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTPSKAAGSKRPTTTSKLHE 60
           MEKGGSQSHVGCKPLTTFVQTDT TFREVVQRLTGPSESHT  SK  GS+RPTTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRQL-TRPKLQIVKPCPSHFKLTT-EHPSYITSPVGTPSKILSKLSIGDEEK-ELNNMEE 120
           RR L TRPKLQIVKPCPS+FK TT EH SYITSPVGTPSKILSKLSIGDEEK ELNN EE
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPK 154
           EKAIKERRFYLHPSPRSM VY QPELLSLFPLESPK
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPK 156

[Close]
BLAST of Lsi01G020480 vs. NCBI nr
Match: gi|802752957|ref|XP_012088377.1| (PREDICTED: VQ motif-containing protein 31 [Jatropha curcas])

HSP 1 Score: 181.8 bits (460), Expect = 9.3e-43
Identity = 107/170 (62.94%), Postives = 124/170 (72.94%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESH----TTPSKAAGSKRPTTTS 60
           MEK  SQ+  GCKP+TTFVQTDT  FRE+VQRLTGPSES     T  +K AG +RPT  S
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRPT--S 60

Query: 61  KLHERRQLTRPKLQIVKPCPSHFK-----LTTEHPSYITSPVGTPSKILSKLSIGDEE-- 120
           KLHERRQ  RPKL+I+KP P +FK      T+ +PS + SPVGTPS I SKLSI + E  
Sbjct: 61  KLHERRQHLRPKLEIIKP-PVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELEDK 120

Query: 121 -KELNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
             ELN+ EEEKAIKERRFYLHPSPRS P Y +P LL+LFPL SP T ++P
Sbjct: 121 ISELNSEEEEKAIKERRFYLHPSPRSRPGYAEPVLLTLFPLRSPTTIEKP 167

[Close]
BLAST of Lsi01G020480 vs. NCBI nr
Match: gi|567867567|ref|XP_006426406.1| (hypothetical protein CICLE_v10026619mg [Citrus clementina])

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 107/174 (61.49%), Postives = 123/174 (70.69%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTP-----SKAAGSKRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T       +K AG KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRQLTRPKLQIVKPC----PSHFKLTTEHPSYITSPVGTPSKILSKLSIGDEEKE 120
           SKLHERRQ TRPKL+IVKP     P      +  PS+  SPVGTPS I +KLSI ++E +
Sbjct: 61  SKLHERRQYTRPKLEIVKPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 L-------NNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
           +       N+ EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP+TS++P
Sbjct: 121 VESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSERP 172

[Close]
BLAST of Lsi01G020480 vs. NCBI nr
Match: gi|568823627|ref|XP_006466212.1| (PREDICTED: VQ motif-containing protein 31 [Citrus sinensis])

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 107/174 (61.49%), Postives = 122/174 (70.11%), Query Frame = 1 

Query: 1   MEKGGSQSHVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTTP-----SKAAGSKRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T       +K AG KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRQLTRPKLQIVKPC----PSHFKLTTEHPSYITSPVGTPSKILSKLSIGDEEKE 120
           SKLHERRQ TRPKL+IV P     P      +  PS+  SPVGTPS I +KLSI ++E +
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 -------LNNMEEEKAIKERRFYLHPSPRSMPVYVQPELLSLFPLESPKTSQQP 159
                  LN+ EEEKAIKERRFYLHPSPRS P Y +PELL+LFPL SP+TS++P
Sbjct: 121 VESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSERP 172

The following BLAST results are available for this feature:
BLAST of Lsi01G020480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VQ31_ARATH1.1e-3858.38VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1[more]
VQ11_ARATH4.7e-1037.50VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1[more]
VQ4_ARATH3.3e-0831.15VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1[more]
VQ33_ARATH6.3e-0732.46VQ motif-containing protein 33 OS=Arabidopsis thaliana GN=VQ33 PE=1 SV=1[more]
VQ13_ARATH6.3e-0730.19VQ motif-containing protein 13 OS=Arabidopsis thaliana GN=VQ13 PE=1 SV=1[more]
BLAST of Lsi01G020480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ05_CUCSA5.3e-6991.03Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1[more]
A0A067JK32_JATCU6.5e-4362.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1[more]
V4SRC0_9ROSI8.5e-4361.49Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1[more]
A0A067EY24_CITSI1.4e-4261.49Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1[more]
V4LAV0_EUTSA1.3e-3859.32Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10015866mg PE=4 SV=1[more]
BLAST of Lsi01G020480 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G08480.26.0e-4058.38 VQ motif-containing protein[more]
AT1G80450.12.6e-1137.50 VQ motif-containing protein[more]
AT1G28280.11.9e-0931.15 VQ motif-containing protein[more]
AT5G53830.13.6e-0832.46 VQ motif-containing protein[more]
AT2G33780.13.6e-0830.19 VQ motif-containing protein[more]
BLAST of Lsi01G020480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199595|gb|KGN54753.1|7.6e-6991.03hypothetical protein Csa_4G448640 [Cucumis sativus][more]
gi|659069434|ref|XP_008449818.1|2.7e-6689.74PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo][more]
gi|802752957|ref|XP_012088377.1|9.3e-4362.94PREDICTED: VQ motif-containing protein 31 [Jatropha curcas][more]
gi|567867567|ref|XP_006426406.1|1.2e-4261.49hypothetical protein CICLE_v10026619mg [Citrus clementina][more]
gi|568823627|ref|XP_006466212.1|2.1e-4261.49PREDICTED: VQ motif-containing protein 31 [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008889VQ
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G020480.1Lsi01G020480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008889VQPFAMPF05678VQcoord: 16..38
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 105..125
scor
NoneNo IPR availablePANTHERPTHR33402FAMILY NOT NAMEDcoord: 12..157
score: 1.7
NoneNo IPR availablePANTHERPTHR33402:SF2SUBFAMILY NOT NAMEDcoord: 12..157
score: 1.7