Cp4.1LG10g12290 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG10g12290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	VQ motif-containing protein
Location	Cp4.1LG10 : 9255696 .. 9256184 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

mRNA sequence

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

Coding sequence (CDS)

ATGGAGAAGGGAGGCAGCCAAAGTCGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCAACACGAGAACGTTTCAAGAGGTTGTACAACGTCTAACCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTCCAAGCTGGGCGAGAATCCTAGCAACGTTACGAGCCCGGTCGGGATGCCTTCGAAGATCTCGTCAAAGCTGTCGACGGGGGAGGACGAAAAGGAGTCAAATAAGGTGTTAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCGTCCATCTCCAAGGTCAAAGGCTGGCTATGCTCAACGAGAGTTGCTTTCATTATTTCCTTTGGAATCCCCCAAACCAACTCAGCACCATGAAACAAAAAAGAATTAA

Protein sequence

MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLTRPKLQIVKPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN

Homology

[Close]

BLAST of Cp4.1LG10g12290 vs. Swiss-Prot
Match: VQ31_ARATH (VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.9e-31
Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 1


Query: 3   KGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QT+T TF+E+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDEKE 122
           LHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
           S   N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG10g12290 vs. Swiss-Prot
Match: VQ13_ARATH (VQ motif-containing protein 13 OS=Arabidopsis thaliana GN=VQ13 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 1


Query: 16  TTFIQTNTRTFQEVVQRLTGPSETHT-------------PPSKAVGSKRSTTTSKLHERR 75
           TTFI+T+  +F++VVQ LTG  +  T             PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKLQIVKPCPSHS----------------KLGENPSNVTSPVGMPSKISSKLSTGE 135
           +  +  L I    P+HS                 L  +   ++ P   P   S   S   
Sbjct: 96  NSMKHYLNIN---PTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS--- 155

Query: 136 DEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLF---PLESPKPTQH 157
           D K S    +E++IKE+GFYLRPSP +     +  LLSLF   P+ SP P+ H
Sbjct: 156 DSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPSPH 202

[Close]

BLAST of Cp4.1LG10g12290 vs. Swiss-Prot
Match: VQ4_ARATH (VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.1e-09
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 1


Query: 16  TTFIQTNTRTFQEVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q +T +F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRH-LTRPKLQIVKPC--PSHSKLGENPSNVTSP--VGMPSKISSK 135
           + +++S    +L+ERR+ +   K+  + P   P +S        + SP  +  PS + S 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------TGEDEKESNKV-LEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 153
           ++         +G   +  N++  EEKA+KERGFYL PSP +     +  LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of Cp4.1LG10g12290 vs. Swiss-Prot
Match: VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 54/169 (31.95%), Postives = 78/169 (46.15%), Query Frame = 1


Query: 14  PLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLT--RPKLQI 73
           P T F+Q +   F+ +VQ+LTG      PP   + S   +  S  H++  LT  +P  ++
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTG-----APPD--ISSSSFSAVSAAHQKLPLTPKKPAFKL 72

Query: 74  VKPCPSHSKLGENPSNVTSPVG---------MPSKIS---------SKLSTGEDEKESNK 133
            +   S  K+    +N+T+P           + S +S         S  S  E+      
Sbjct: 73  HERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPD 132

Query: 134 VLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
             E+KAI E+GFY  PSPRS +  A  ELL LFPL SP  T H   + N
Sbjct: 133 KEEQKAIAEKGFYFLPSPRSGSEPAP-ELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of Cp4.1LG10g12290 vs. TrEMBL
Match: A0A0A0KZ05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.2e-53
Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSK--LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RR L TRPKLQIVKPCPSH K  +GE+PS +TSP+G PSKI SKLS G++EKE  N + E
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
           EKAIKER FYL PSPRS   YAQ ELLSLFPLESPK   +HETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. TrEMBL
Match: V4SRC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.1e-32
Identity = 93/173 (53.76%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHT-----PPSKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QT+T TF+EVVQRLTGPSE++T       +K  G KR   T
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQ--T 60

Query: 61  SKLHERRHLTRPKLQIVKPCPSHSKLGENPSN------VTSPVGMPSKISSKLSTGEDEK 120
           SKLHERR  TRPKL+IVKP P   K G +PS         SPVG PS I +KLS  EDE 
Sbjct: 61  SKLHERRQYTRPKLEIVKP-PIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDEN 120

Query: 121 ESNKVL-------EEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 156
           +    +       EEKAIKER FYL PSPRS+ GY + ELL+LFPL SP+ ++
Sbjct: 121 KVESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSE 170

[Close]

BLAST of Cp4.1LG10g12290 vs. TrEMBL
Match: A0A067EY24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.3e-32
Identity = 94/173 (54.34%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QT+T TF+EVVQRLTGPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKLQIV------KPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEK 120
           SKLHERR  TRPKL+IV      KP  S SK G  PS   SPVG PS I +KLS  EDE 
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSG-TPSFPASPVGTPSTIFAKLSIMEDEN 120

Query: 121 ESNKVL-------EEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 156
           +    +       EEKAIKER FYL PSPRS+ GY + ELL+LFPL SP+ ++
Sbjct: 121 KVESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSE 170

[Close]

BLAST of Cp4.1LG10g12290 vs. TrEMBL
Match: D7MXP5_ARALL (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_655406 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.6e-31
Identity = 89/176 (50.57%), Postives = 110/176 (62.50%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTT 60
           M   GSQ+   C P+TTF+QT+T TF+E+VQRLTGPSE +    TP +  + +  +   T
Sbjct: 18  MNNKGSQNVATCKPVTTFVQTDTNTFREIVQRLTGPSENNAAAATPEATVIKTAIQKRPT 77

Query: 61  SKLHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDE 120
           SKLHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E
Sbjct: 78  SKLHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGE 137

Query: 121 KE------SNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHE 159
           K       +N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP  + +H+
Sbjct: 138 KAEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLASPNSSGNHK 193

[Close]

BLAST of Cp4.1LG10g12290 vs. TrEMBL
Match: A0A067JK32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.2e-30
Identity = 89/163 (54.60%), Postives = 105/163 (64.42%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSKRSTTTS 60
           MEK  SQ+   C P+TTF+QT+T  F+E+VQRLTGPSE+     T  +K  G +R T  S
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRPT--S 60

Query: 61  KLHERRHLTRPKLQIVKPCPSHSKL-----GENPSNVTSPVGMPSKISSKLSTGEDE--- 120
           KLHERR   RPKL+I+KP  +   L       NPS + SPVG PS I SKLS  E E   
Sbjct: 61  KLHERRQHLRPKLEIIKPPVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELEDKI 120

Query: 121 KESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
            E N   EEKAIKER FYL PSPRS+ GYA+  LL+LFPL SP
Sbjct: 121 SELNSEEEEKAIKERRFYLHPSPRSRPGYAEPVLLTLFPLRSP 161

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR10
Match: AT5G08480.2 (AT5G08480.2 VQ motif-containing protein)

HSP 1 Score: 136.3 bits (342), Expect = 1.6e-32
Identity = 85/164 (51.83%), Postives = 103/164 (62.80%), Query Frame = 1


Query: 3   KGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QT+T TF+E+VQRLTGP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDEKE 122
           LHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 152
           S   N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR10
Match: AT2G33780.1 (AT2G33780.1 VQ motif-containing protein)

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11
Identity = 58/173 (33.53%), Postives = 84/173 (48.55%), Query Frame = 1


Query: 16  TTFIQTNTRTFQEVVQRLTGPSETHT-------------PPSKAVGSKRSTTTSKLHERR 75
           TTFI+T+  +F++VVQ LTG  +  T             PP KAV +K+ +++ +L ERR
Sbjct: 36  TTFIRTDPSSFKQVVQLLTGIPKNPTHQPDPRFPPFHSIPPIKAVTNKKQSSSFRLSERR 95

Query: 76  HLTRPKLQIVKPCPSHS----------------KLGENPSNVTSPVGMPSKISSKLSTGE 135
           +  +  L I    P+HS                 L  +   ++ P   P   S   S   
Sbjct: 96  NSMKHYLNIN---PTHSGPPEILTPTILNFPALDLSPDTPLMSDPFYRPGSFSQSPS--- 155

Query: 136 DEKESNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLF---PLESPKPTQH 157
           D K S    +E++IKE+GFYLRPSP +     +  LLSLF   P+ SP P+ H
Sbjct: 156 DSKPSFDDDQERSIKEKGFYLRPSPSTTPRDTEPRLLSLFPMTPIHSPAPSPH 202

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR10
Match: AT1G28280.1 (AT1G28280.1 VQ motif-containing protein)

HSP 1 Score: 62.8 bits (151), Expect = 2.3e-10
Identity = 58/181 (32.04%), Postives = 90/181 (49.72%), Query Frame = 1


Query: 16  TTFIQTNTRTFQEVVQRLTG------------PSETH-------------TPPSKAVGSK 75
           TTF+Q +T +F++VVQ LTG            P+ TH              PP KAV +K
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RSTTTS----KLHERRH-LTRPKLQIVKPC--PSHSKLGENPSNVTSP--VGMPSKISSK 135
           + +++S    +L+ERR+ +   K+  + P   P +S        + SP  +  PS + S 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------TGEDEKESNKV-LEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESP 153
           ++         +G   +  N++  EEKA+KERGFYL PSP +     +  LL LFP+ SP
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLPLFPVTSP 236

[Close]

BLAST of Cp4.1LG10g12290 vs. TAIR10
Match: AT1G80450.1 (AT1G80450.1 VQ motif-containing protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08
Identity = 54/169 (31.95%), Postives = 78/169 (46.15%), Query Frame = 1


Query: 14  PLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHERRHLT--RPKLQI 73
           P T F+Q +   F+ +VQ+LTG      PP   + S   +  S  H++  LT  +P  ++
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTG-----APPD--ISSSSFSAVSAAHQKLPLTPKKPAFKL 72

Query: 74  VKPCPSHSKLGENPSNVTSPVG---------MPSKIS---------SKLSTGEDEKESNK 133
            +   S  K+    +N+T+P           + S +S         S  S  E+      
Sbjct: 73  HERRQSSKKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPD 132

Query: 134 VLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
             E+KAI E+GFY  PSPRS +  A  ELL LFPL SP  T H   + N
Sbjct: 133 KEEQKAIAEKGFYFLPSPRSGSEPAP-ELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: gi|700199595|gb|KGN54753.1| (hypothetical protein Csa_4G448640 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-53
Identity = 120/166 (72.29%), Postives = 134/166 (80.72%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSK--LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RR L TRPKLQIVKPCPSH K  +GE+PS +TSP+G PSKI SKLS G++EKE  N + E
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
           EKAIKER FYL PSPRS   YAQ ELLSLFPLESPK   +HETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: gi|659069434|ref|XP_008449818.1| (PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo])

HSP 1 Score: 212.2 bits (539), Expect = 6.6e-52
Identity = 121/166 (72.89%), Postives = 133/166 (80.12%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QT+T+TF+EVVQRLTGPSE+HT  SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKLQIVKPCPSHSK--LGENPSNVTSPVGMPSKISSKLSTGEDEKES-NKVLE 120
           RRHL TRPKLQIVKPCPS+ K    E+ S +TSPVG PSKI SKLS G++EKE  N   E
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHETKKN 163
           EKAIKER FYL PSPRS A YAQ ELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: gi|567867567|ref|XP_006426406.1| (hypothetical protein CICLE_v10026619mg [Citrus clementina])

HSP 1 Score: 146.0 bits (367), Expect = 5.8e-32
Identity = 93/173 (53.76%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHT-----PPSKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QT+T TF+EVVQRLTGPSE++T       +K  G KR   T
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQ--T 60

Query: 61  SKLHERRHLTRPKLQIVKPCPSHSKLGENPSN------VTSPVGMPSKISSKLSTGEDEK 120
           SKLHERR  TRPKL+IVKP P   K G +PS         SPVG PS I +KLS  EDE 
Sbjct: 61  SKLHERRQYTRPKLEIVKP-PIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDEN 120

Query: 121 ESNKVL-------EEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 156
           +    +       EEKAIKER FYL PSPRS+ GY + ELL+LFPL SP+ ++
Sbjct: 121 KVESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSE 170

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: gi|568823627|ref|XP_006466212.1| (PREDICTED: VQ motif-containing protein 31 [Citrus sinensis])

HSP 1 Score: 145.6 bits (366), Expect = 7.6e-32
Identity = 94/173 (54.34%), Postives = 110/173 (63.58%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QT+T TF+EVVQRLTGPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKLQIV------KPCPSHSKLGENPSNVTSPVGMPSKISSKLSTGEDEK 120
           SKLHERR  TRPKL+IV      KP  S SK G  PS   SPVG PS I +KLS  EDE 
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSG-TPSFPASPVGTPSTIFAKLSIMEDEN 120

Query: 121 ESNKVL-------EEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQ 156
           +    +       EEKAIKER FYL PSPRS+ GY + ELL+LFPL SP+ ++
Sbjct: 121 KVESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSE 170

[Close]

BLAST of Cp4.1LG10g12290 vs. NCBI nr
Match: gi|297788762|ref|XP_002862428.1| (predicted protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 89/176 (50.57%), Postives = 110/176 (62.50%), Query Frame = 1


Query: 1   MEKGGSQSRVVCTPLTTFIQTNTRTFQEVVQRLTGPSETH----TPPSKAVGSK-RSTTT 60
           M   GSQ+   C P+TTF+QT+T TF+E+VQRLTGPSE +    TP +  + +  +   T
Sbjct: 18  MNNKGSQNVATCKPVTTFVQTDTNTFREIVQRLTGPSENNAAAATPEATVIKTAIQKRPT 77

Query: 61  SKLHERRHLTRPKLQIVKPCPSHSKLGENPSN-------VTSPVGMPSKISSKLSTGEDE 120
           SKLHERR   RPKL+IVKP  S    G  PS+       +TSPVG PS + S LS  E E
Sbjct: 78  SKLHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGE 137

Query: 121 KE------SNKVLEEKAIKERGFYLRPSPRSKAGYAQRELLSLFPLESPKPTQHHE 159
           K       +N   EEKAIKER FYL PSPRSK GY + ELL+LFPL SP  + +H+
Sbjct: 138 KAEPDSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLASPNSSGNHK 193

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ31_ARATH	2.9e-31	51.83	VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1	[more]
VQ13_ARATH	1.4e-09	33.53	VQ motif-containing protein 13 OS=Arabidopsis thaliana GN=VQ13 PE=1 SV=1	[more]
VQ4_ARATH	4.1e-09	32.04	VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1	[more]
VQ11_ARATH	3.8e-07	31.95	VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1	[more]

BLAST of Cp4.1LG10g12290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ05_CUCSA	3.2e-53	72.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1	[more]
V4SRC0_9ROSI	4.1e-32	53.76	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1	[more]
A0A067EY24_CITSI	5.3e-32	54.34	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1	[more]
D7MXP5_ARALL	7.6e-31	50.57	Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_655406 PE=4 ...	[more]
A0A067JK32_JATCU	2.2e-30	54.60	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1	[more]

BLAST of Cp4.1LG10g12290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08480.2	1.6e-32	51.83	VQ motif-containing protein	[more]
AT2G33780.1	7.8e-11	33.53	VQ motif-containing protein	[more]
AT1G28280.1	2.3e-10	32.04	VQ motif-containing protein	[more]
AT1G80450.1	2.1e-08	31.95	VQ motif-containing protein	[more]

BLAST of Cp4.1LG10g12290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700199595\|gb\|KGN54753.1\|	4.6e-53	72.29	hypothetical protein Csa_4G448640 [Cucumis sativus]	[more]
gi\|659069434\|ref\|XP_008449818.1\|	6.6e-52	72.89	PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo]	[more]
gi\|567867567\|ref\|XP_006426406.1\|	5.8e-32	53.76	hypothetical protein CICLE_v10026619mg [Citrus clementina]	[more]
gi\|568823627\|ref\|XP_006466212.1\|	7.6e-32	54.34	PREDICTED: VQ motif-containing protein 31 [Citrus sinensis]	[more]
gi\|297788762\|ref\|XP_002862428.1\|	1.1e-30	50.57	predicted protein [Arabidopsis lyrata subsp. lyrata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12290.1	Cp4.1LG10g12290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..39 score: 4.
None	No IPR available	PANTHER	PTHR33402	FAMILY NOT NAMED	coord: 12..158 score: 2.5
None	No IPR available	PANTHER	PTHR33402:SF2	SUBFAMILY NOT NAMED	coord: 12..158 score: 2.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG10g12290	Cucsa.170100	Cucumber (Gy14) v1	cgycpeB0468
Cp4.1LG10g12290	CmoCh03G000080	Cucurbita moschata (Rifu)	cmocpeB606
Cp4.1LG10g12290	Cla001183	Watermelon (97103) v1	cpewmB089
Cp4.1LG10g12290	Csa4G448640	Cucumber (Chinese Long) v2	cpecuB073
Cp4.1LG10g12290	MELO3C003285	Melon (DHL92) v3.5.1	cpemeB066
Cp4.1LG10g12290	ClCG04G002670	Watermelon (Charleston Gray)	cpewcgB080
Cp4.1LG10g12290	CSPI04G19680	Wild cucumber (PI 183967)	cpecpiB067
Cp4.1LG10g12290	Lsi01G020480	Bottle gourd (USVL1VR-Ls)	cpelsiB050
Cp4.1LG10g12290	MELO3C003285.2	Melon (DHL92) v3.6.1	cpemedB084
Cp4.1LG10g12290	CsaV3_4G030030	Cucumber (Chinese Long) v3	cpecucB0077
Cp4.1LG10g12290	Bhi03G002358	Wax gourd	cpewgoB0095
Cp4.1LG10g12290	CsGy4G018530	Cucumber (Gy14) v2	cgybcpeB465

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG10g12290	Cp4.1LG19g00160	Cucurbita pepo (Zucchini)	cpecpeB082

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG10g12290	Melon (DHL92) v3.5.1	cpemeB075
Cp4.1LG10g12290	Melon (DHL92) v3.6.1	cpemedB097
Cp4.1LG10g12290	Silver-seed gourd	carcpeB0665
Cp4.1LG10g12290	Silver-seed gourd	carcpeB0729
Cp4.1LG10g12290	Cucurbita pepo (Zucchini)	cpecpeB085
Cp4.1LG10g12290	Cucurbita maxima (Rimu)	cmacpeB418
Cp4.1LG10g12290	Cucurbita maxima (Rimu)	cmacpeB654
Cp4.1LG10g12290	Cucurbita maxima (Rimu)	cmacpeB656
Cp4.1LG10g12290	Cucurbita maxima (Rimu)	cmacpeB863
Cp4.1LG10g12290	Cucurbita moschata (Rifu)	cmocpeB604
Cp4.1LG10g12290	Cucurbita moschata (Rifu)	cmocpeB803