CsaV3_4G030030 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G030030
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	VQ motif-containing protein
Location	chr4 : 19782890 .. 19783475 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGGAGACAGCCAAAGCCATGTTGGGTGTAAACCTTTGACCACATTCGTACAAACCGATACAAAAACGTTTCGTGAGGTCGTACAACGTCTAACCGGGCCATCAGAAAGCCACACGACGTCGTCAAAGGGATTTGGATCAAGGAGGCCAACCACAACCTCAAAACTCCATGAAAGGAGACAGTTGATCACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGGCTACAATTGGTGAGCACCCTAGCTATATTACGAGCCCGCTCGGGACACCGTCGAAGATATTGTCGAAGCTGTCTATTGGGGATGAAGAGAAGGAGGAGCTGAATAACATGGAAGAAGAAAAGGCAATCAAAGAAAGGAGATTTTATTTGCATCCATCTCCAAGGTCAATGCCTATCTATGCCCAACCAGAGTTGCTTTCATTATTTCCTTTGGAGTCTCCAAAGAAAGTCAGCAACCATGAAACCAAAATTAACTAATTAATCTTTAATTCTCATCTTTGTTCATTTTTCCAGGGACTTTCCTCACACATTTCTTCTCATTTTCTCCATGCTTTCTTCATAA

mRNA sequence

ATGGAGAAGGGAGACAGCCAAAGCCATGTTGGGTGTAAACCTTTGACCACATTCGTACAAACCGATACAAAAACGTTTCGTGAGGTCGTACAACGTCTAACCGGGCCATCAGAAAGCCACACGACGTCGTCAAAGGGATTTGGATCAAGGAGGCCAACCACAACCTCAAAACTCCATGAAAGGAGACAGTTGATCACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGGCTACAATTGGTGAGCACCCTAGCTATATTACGAGCCCGCTCGGGACACCGTCGAAGATATTGTCGAAGCTGTCTATTGGGGATGAAGAGAAGGAGGAGCTGAATAACATGGAAGAAGAAAAGGCAATCAAAGAAAGGAGATTTTATTTGCATCCATCTCCAAGGGACTTTCCTCACACATTTCTTCTCATTTTCTCCATGCTTTCTTCATAA

Coding sequence (CDS)

ATGGAGAAGGGAGACAGCCAAAGCCATGTTGGGTGTAAACCTTTGACCACATTCGTACAAACCGATACAAAAACGTTTCGTGAGGTCGTACAACGTCTAACCGGGCCATCAGAAAGCCACACGACGTCGTCAAAGGGATTTGGATCAAGGAGGCCAACCACAACCTCAAAACTCCATGAAAGGAGACAGTTGATCACAAGACCAAAGCTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGGCTACAATTGGTGAGCACCCTAGCTATATTACGAGCCCGCTCGGGACACCGTCGAAGATATTGTCGAAGCTGTCTATTGGGGATGAAGAGAAGGAGGAGCTGAATAACATGGAAGAAGAAAAGGCAATCAAAGAAAGGAGATTTTATTTGCATCCATCTCCAAGGGACTTTCCTCACACATTTCTTCTCATTTTCTCCATGCTTTCTTCATAA

Protein sequence

MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHERRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEEEKAIKERRFYLHPSPRDFPHTFLLIFSMLSS

Homology

[Close]

BLAST of CsaV3_4G030030 vs. NCBI nr
Match: KGN54753.1 (hypothetical protein Csa_4G448640 [Cucumis sativus])

HSP 1 Score: 276.2 bits (705), Expect = 6.8e-71
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60
           MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120
           RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERRFYLHPSPRDFP 140
           EKAIKERRFYLHPSPR  P
Sbjct: 121 EKAIKERRFYLHPSPRSMP 139

[Close]

BLAST of CsaV3_4G030030 vs. NCBI nr
Match: XP_022933110.1 (LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 2.6e-46
Identity = 104/136 (76.47%), Postives = 114/136 (83.82%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60
           MEKG SQS V C PLTTF+QTDT TFREVVQRLTGPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGGSQSRVVCTPLTTFIQTDTTTFREVVQRLTGPSETHTPPSKAVGSKRSTTTSKLHE 60

Query: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120
           RR L TRPKLQIVKPCPSHFK+   EHPSY+TSP+ TPSKILSKL +G++EKE  N +EE
Sbjct: 61  RRHL-TRPKLQIVKPCPSHFKS--DEHPSYVTSPVRTPSKILSKLLMGEDEKES-NKVEE 120

Query: 121 EKAIKERRFYLHPSPR 137
           EKAIKER FYLHPS R
Sbjct: 121 EKAIKERGFYLHPSLR 132

[Close]

BLAST of CsaV3_4G030030 vs. NCBI nr
Match: XP_022149395.1 (VQ motif-containing protein 31 [Momordica charantia])

HSP 1 Score: 193.4 bits (490), Expect = 5.8e-46
Identity = 110/144 (76.39%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFG-SRRPTTTSKLH 60
           MEK  +QS VGCKPLTTFVQTDT TFREVVQRLTGPSESHT  SK  G S+RP  TSKLH
Sbjct: 1   MEKAANQSLVGCKPLTTFVQTDTTTFREVVQRLTGPSESHTPPSKAAGSSKRPIATSKLH 60

Query: 61  ERRQLITRPKLQIVKPCPSHF----KATIGEHPSYITSPLGTPSKILSKLSIGDEEKEEL 120
           ERR L TRPKLQIVKP  SHF         EHPS  +SPLGTPSKILSKLSIGD EK EL
Sbjct: 61  ERRHL-TRPKLQIVKPAASHFFKPTSCISSEHPSCTSSPLGTPSKILSKLSIGDGEK-EL 120

Query: 121 NNMEEEKAIKERRFYLHPSPRDFP 140
           N MEEEKAIKERRFYLHPSPR  P
Sbjct: 121 NAMEEEKAIKERRFYLHPSPRSMP 142

[Close]

BLAST of CsaV3_4G030030 vs. NCBI nr
Match: XP_023518304.1 (VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 2.6e-38
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHT-TSSKGFGSRRPTTTSKLH 60
           MEK  +Q+ V CKPLTTFVQTDT  FRE+VQRLTGPSES+T  SSK  GS+RPT+TSKLH
Sbjct: 1   MEKPGTQTPVKCKPLTTFVQTDTTAFREIVQRLTGPSESYTLPSSKAAGSKRPTSTSKLH 60

Query: 61  ERRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSK----------------ILS 120
           ERR L TRPKLQIVKP  SHFK      PS+ITSP+GTP +                I+S
Sbjct: 61  ERRHL-TRPKLQIVKPSLSHFKP-----PSFITSPIGTPPRADXXXXXXXXXXXXXXIMS 120

Query: 121 KLSIGDEEKEELNNMEEEKAIKERRFYLHPSPR 137
           KLSIGD EK ELN++EEEKA +E+RFYLHPSPR
Sbjct: 121 KLSIGDGEK-ELNSIEEEKATREKRFYLHPSPR 146

[Close]

BLAST of CsaV3_4G030030 vs. NCBI nr
Match: XP_022966462.1 (VQ motif-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 166.8 bits (421), Expect = 5.8e-38
Identity = 99/153 (64.71%), Postives = 113/153 (73.86%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHT-TSSKGFGSRRPTTTSKLH 60
           MEK  +Q+ V CKPLTTFVQTDT  FREVVQRLTGPSES+T  SSK  GS+RPT+TSKLH
Sbjct: 25  MEKPGTQTPVKCKPLTTFVQTDTTAFREVVQRLTGPSESYTLPSSKATGSKRPTSTSKLH 84

Query: 61  ERRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSK----------------ILS 120
           ERR L TRPKLQIVKP  SHFK      PS+ITSP+GTP +                I+S
Sbjct: 85  ERRHL-TRPKLQIVKPSLSHFKP-----PSFITSPVGTPPRADXXXXXXXXXXXXXXIMS 144

Query: 121 KLSIGDEEKEELNNMEEEKAIKERRFYLHPSPR 137
           KLSIGD EK ELN++EEE+A +E+RFYLHPSPR
Sbjct: 145 KLSIGDGEK-ELNSIEEERATREKRFYLHPSPR 170

[Close]

BLAST of CsaV3_4G030030 vs. TAIR10
Match: AT5G08480.2 (VQ motif-containing protein)

HSP 1 Score: 128.3 bits (321), Expect = 4.2e-30
Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 3   KGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSS-------KGFGSRRPTTT 62
           KG       CKP+TTFVQTDT TFRE+VQRLTGP+E++  ++       K    +RP  T
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRP--T 63

Query: 63  SKLHERRQLITRPKLQIVKPCPSHFKATIGEHPS-------YITSPLGTPSKILSKLSI- 122
           SKLHERRQ + RPKL+IVKP P  FK T G  PS        +TSP+GTPS + S LS+ 
Sbjct: 64  SKLHERRQCM-RPKLEIVKP-PLSFKPT-GTTPSSKSGNTNLLTSPVGTPSSLFSNLSLI 123

Query: 123 -GDEEKEELNNMEEEKAIKERRFYLHPSPRDFP 140
            G+ +    N  EEEKAIKERRFYLHPSPR  P
Sbjct: 124 EGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKP 151

[Close]

BLAST of CsaV3_4G030030 vs. TAIR10
Match: AT1G80450.1 (VQ motif-containing protein)

HSP 1 Score: 52.8 bits (125), Expect = 2.2e-07
Identity = 46/139 (33.09%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 13  KPLTTFVQTDTKTFREVVQRLTGP----SESHTTSSKGFGSRRPTTTS----KLHERRQL 72
           +P T FVQ D   FR +VQ+LTG     S S  ++      + P T      KLHERRQ 
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 73  ITRPKLQI-----VKPCPSHFKATIGEHPSYITSPLGTPSKILSKLS--IGDEEKEELNN 132
             + +L++          SHF      H  ++ SP+       +++S     EE     +
Sbjct: 72  SKKMELKVNNITNPNDAFSHF------HRGFLVSPVSHLDPFWARVSPHSAREEHHAQPD 131

Query: 133 MEEEKAIKERRFYLHPSPR 137
            EE+KAI E+ FY  PSPR
Sbjct: 132 KEEQKAIAEKGFYFLPSPR 144

[Close]

BLAST of CsaV3_4G030030 vs. TAIR10
Match: AT1G28280.1 (VQ motif-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 0


Query: 16  TTFVQTDTKTFREVVQRLTG------------PSESH-------TTSS------KGFGSR 75
           TTFVQ DT +F++VVQ LTG            P+ +H       T SS      K   ++
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RPTTTS----KLHERRQLITRPKLQIVKPCPSHFKATIGEHPSYITSP--LGTPSKILSK 135
           + +++S    +L+ERR  +   K+  + P               I SP  L  PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFXXXXXXXXXRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------IGDEEKEELNNMEEEKAIKERRFYLHPSPRDFP 140
           ++          G   +       EEKA+KER FYLHPSP   P
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTP 220

[Close]

BLAST of CsaV3_4G030030 vs. Swiss-Prot
Match: sp|Q9FNP0|VQ31_ARATH (VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.5e-29
Identity = 83/153 (54.25%), Postives = 99/153 (64.71%), Query Frame = 0


Query: 3   KGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSS-------KGFGSRRPTTT 62
           KG       CKP+TTFVQTDT TFRE+VQRLTGP+E++  ++       K    +RP  T
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRP--T 63

Query: 63  SKLHERRQLITRPKLQIVKPCPSHFKATIGEHPS-------YITSPLGTPSKILSKLSI- 122
           SKLHERRQ + RPKL+IVKP P  FK T G  PS        +TSP+GTPS + S LS+ 
Sbjct: 64  SKLHERRQCM-RPKLEIVKP-PLSFKPT-GTTPSSKSGNTNLLTSPVGTPSSLFSNLSLI 123

Query: 123 -GDEEKEELNNMEEEKAIKERRFYLHPSPRDFP 140
            G+ +    N  EEEKAIKERRFYLHPSPR  P
Sbjct: 124 EGEPDSCTTNIEEEEKAIKERRFYLHPSPRSKP 151

[Close]

BLAST of CsaV3_4G030030 vs. Swiss-Prot
Match: sp|Q9M8L3|VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06
Identity = 46/139 (33.09%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 13  KPLTTFVQTDTKTFREVVQRLTGP----SESHTTSSKGFGSRRPTTTS----KLHERRQL 72
           +P T FVQ D   FR +VQ+LTG     S S  ++      + P T      KLHERRQ 
Sbjct: 12  EPNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQS 71

Query: 73  ITRPKLQI-----VKPCPSHFKATIGEHPSYITSPLGTPSKILSKLS--IGDEEKEELNN 132
             + +L++          SHF      H  ++ SP+       +++S     EE     +
Sbjct: 72  SKKMELKVNNITNPNDAFSHF------HRGFLVSPVSHLDPFWARVSPHSAREEHHAQPD 131

Query: 133 MEEEKAIKERRFYLHPSPR 137
            EE+KAI E+ FY  PSPR
Sbjct: 132 KEEQKAIAEKGFYFLPSPR 144

[Close]

BLAST of CsaV3_4G030030 vs. Swiss-Prot
Match: sp|Q5M750|VQ4_ARATH (VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.4e-05
Identity = 51/164 (31.10%), Postives = 72/164 (43.90%), Query Frame = 0


Query: 16  TTFVQTDTKTFREVVQRLTG------------PSESH-------TTSS------KGFGSR 75
           TTFVQ DT +F++VVQ LTG            P+ +H       T SS      K   ++
Sbjct: 57  TTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPDPRSTPSSFSIPPIKAVPNK 116

Query: 76  RPTTTS----KLHERRQLITRPKLQIVKPCPSHFKATIGEHPSYITSP--LGTPSKILSK 135
           + +++S    +L+ERR  +   K+  + P               I SP  L  PS +LS 
Sbjct: 117 KQSSSSASGFRLYERRNSMKNLKINPLNPVFXXXXXXXXXRKPEILSPSILDFPSLVLSP 176

Query: 136 LS---------IGDEEKEELNNMEEEKAIKERRFYLHPSPRDFP 140
           ++          G   +       EEKA+KER FYLHPSP   P
Sbjct: 177 VTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTP 220

[Close]

BLAST of CsaV3_4G030030 vs. TrEMBL
Match: tr|A0A0A0KZ05|A0A0A0KZ05_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.5e-71
Identity = 137/139 (98.56%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60
           MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120
           RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERRFYLHPSPRDFP 140
           EKAIKERRFYLHPSPR  P
Sbjct: 121 EKAIKERRFYLHPSPRSMP 139

[Close]

BLAST of CsaV3_4G030030 vs. TrEMBL
Match: tr|A0A067JK32|A0A067JK32_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25869 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.5e-34
Identity = 93/149 (62.42%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESH----TTSSKGFGSRRPTTTS 60
           MEK  SQ+  GCKP+TTFVQTDT  FRE+VQRLTGPSES     T ++K  G RRP  TS
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRP--TS 60

Query: 61  KLHERRQLITRPKLQIVKPCPSHFK----ATIGEHPSYITSPLGTPSKILSKLSIGDEEK 120
           KLHERRQ + RPKL+I+KP P +FK     T   +PS + SP+GTPS I SKLSI + E 
Sbjct: 61  KLHERRQHL-RPKLEIIKP-PVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELED 120

Query: 121 E--ELNNMEEEKAIKERRFYLHPSPRDFP 140
           +  ELN+ EEEKAIKERRFYLHPSPR  P
Sbjct: 121 KISELNSEEEEKAIKERRFYLHPSPRSRP 145

[Close]

BLAST of CsaV3_4G030030 vs. TrEMBL
Match: tr|A0A2N9IBT9|A0A2N9IBT9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49435 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.0e-31
Identity = 92/159 (57.86%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHT----TSSKGFGSRRPTTTS 60
           M+K  SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+     T+ K  G +RP  T 
Sbjct: 1   MDKSGSQGTAGCKPLTTFVQTDTHTFREVVQRLTGPSESNAAQEGTAMKVVGVKRP--TP 60

Query: 61  KLHERRQLITRPKLQIVK-PCP---------SHFKATIGEHPSYITSPLGTPSKILSKLS 120
           KLHERRQ  +RPKL+IVK PCP           +  T   + S++ SP+ TPS +LSKLS
Sbjct: 61  KLHERRQ-YSRPKLEIVKPPCPFKPNTSTEKQSYSPTKSGNSSFLPSPV-TPSTMLSKLS 120

Query: 121 IGDEEKE------ELNNMEEEKAIKERRFYLHPSPRDFP 140
           I +EEK+      E N+ EEEKAIKERRFYLHPSPR  P
Sbjct: 121 ILEEEKKGESAMSEFNSQEEEKAIKERRFYLHPSPRSRP 155

[Close]

BLAST of CsaV3_4G030030 vs. TrEMBL
Match: tr|A0A2H5NF21|A0A2H5NF21_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_038460 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.5e-31
Identity = 92/154 (59.74%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTS-----SKGFGSRRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T S     +K  G +R   T
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKR--QT 60

Query: 61  SKLHERRQLITRPKLQIVKPCPSHFK----ATIGEHPSYITSPLGTPSKILSKLSIGDEE 120
           SKLHERRQ  TRPKL+IVKP P  FK     +    PS+  SP+GTPS I +KLSI ++E
Sbjct: 61  SKLHERRQ-YTRPKLEIVKP-PIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDE 120

Query: 121 KE------ELNNMEEEKAIKERRFYLHPSPRDFP 140
            +        N+ EEEKAIKERRFYLHPSPR  P
Sbjct: 121 NKVESAISAFNSQEEEKAIKERRFYLHPSPRSRP 150

[Close]

BLAST of CsaV3_4G030030 vs. TrEMBL
Match: tr|V4SRC0|V4SRC0_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026619mg PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.5e-31
Identity = 92/154 (59.74%), Postives = 104/154 (67.53%), Query Frame = 0


Query: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTS-----SKGFGSRRPTTT 60
           ME   SQ   GCKPLTTFVQTDT TFREVVQRLTGPSES+T S     +K  G +R   T
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKR--QT 60

Query: 61  SKLHERRQLITRPKLQIVKPCPSHFK----ATIGEHPSYITSPLGTPSKILSKLSIGDEE 120
           SKLHERRQ  TRPKL+IVKP P  FK     +    PS+  SP+GTPS I +KLSI ++E
Sbjct: 61  SKLHERRQ-YTRPKLEIVKP-PIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDE 120

Query: 121 KE------ELNNMEEEKAIKERRFYLHPSPRDFP 140
            +        N+ EEEKAIKERRFYLHPSPR  P
Sbjct: 121 NKVESAISAFNSQEEEKAIKERRFYLHPSPRSRP 150

The following BLAST results are available for this feature:

BLAST of CsaV3_4G030030 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN54753.1	6.8e-71	98.56	hypothetical protein Csa_4G448640 [Cucumis sativus]	[more]
XP_022933110.1	2.6e-46	76.47	LOW QUALITY PROTEIN: VQ motif-containing protein 31-like [Cucurbita moschata]	[more]
XP_022149395.1	5.8e-46	76.39	VQ motif-containing protein 31 [Momordica charantia]	[more]
XP_023518304.1	2.6e-38	64.71	VQ motif-containing protein 31 [Cucurbita pepo subsp. pepo]	[more]
XP_022966462.1	5.8e-38	64.71	VQ motif-containing protein 31 [Cucurbita maxima]	[more]

BLAST of CsaV3_4G030030 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08480.2	4.2e-30	54.25	VQ motif-containing protein	[more]
AT1G80450.1	2.2e-07	33.09	VQ motif-containing protein	[more]
AT1G28280.1	1.9e-06	31.10	VQ motif-containing protein	[more]

BLAST of CsaV3_4G030030 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FNP0\|VQ31_ARATH	7.5e-29	54.25	VQ motif-containing protein 31 OS=Arabidopsis thaliana OX=3702 GN=VQ31 PE=1 SV=1	[more]
sp\|Q9M8L3\|VQ11_ARATH	4.0e-06	33.09	VQ motif-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=VQ11 PE=1 SV=1	[more]
sp\|Q5M750\|VQ4_ARATH	3.4e-05	31.10	VQ motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=VQ4 PE=1 SV=1	[more]

BLAST of CsaV3_4G030030 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KZ05\|A0A0A0KZ05_CUCSA	4.5e-71	98.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G448640 PE=4 SV=1	[more]
tr\|A0A067JK32\|A0A067JK32_JATCU	7.5e-34	62.42	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25869 PE=4 SV=1	[more]
tr\|A0A2N9IBT9\|A0A2N9IBT9_FAGSY	2.0e-31	57.86	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49435 PE=4 SV=1	[more]
tr\|A0A2H5NF21\|A0A2H5NF21_CITUN	4.5e-31	59.74	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_038460 PE=4 SV=1	[more]
tr\|V4SRC0\|V4SRC0_9ROSI	4.5e-31	59.74	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026619mg PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G030030.1	CsaV3_4G030030.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..60
None	No IPR available	PANTHER	PTHR33402:SF2	VQ MOTIF-CONTAINING PROTEIN 31	coord: 1..137
None	No IPR available	PANTHER	PTHR33402	FAMILY NOT NAMED	coord: 1..137
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..38 e-value: 1.6E-9 score: 37.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G030030	CSPI04G19680	Wild cucumber (PI 183967)	cpicucB212
CsaV3_4G030030	Cucsa.170100	Cucumber (Gy14) v1	cgycucB271
CsaV3_4G030030	CmaCh07G013680	Cucurbita maxima (Rimu)	cmacucB1023
CsaV3_4G030030	CmoCh03G000080	Cucurbita moschata (Rifu)	cmocucB0784
CsaV3_4G030030	CmoCh07G014070	Cucurbita moschata (Rifu)	cmocucB1007
CsaV3_4G030030	Cp4.1LG10g12290	Cucurbita pepo (Zucchini)	cpecucB0077
CsaV3_4G030030	Cp4.1LG19g00160	Cucurbita pepo (Zucchini)	cpecucB0603
CsaV3_4G030030	CsGy4G018530	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G030030	Cla001183	Watermelon (97103) v1	cucwmB357
CsaV3_4G030030	MELO3C003285	Melon (DHL92) v3.5.1	cucmeB329
CsaV3_4G030030	ClCG04G002670	Watermelon (Charleston Gray)	cucwcgB319
CsaV3_4G030030	Lsi01G020480	Bottle gourd (USVL1VR-Ls)	cuclsiB274
CsaV3_4G030030	MELO3C003285.2	Melon (DHL92) v3.6.1	cucmedB323
CsaV3_4G030030	Cla97C04G070150	Watermelon (97103) v2	cucwmbB308
CsaV3_4G030030	Bhi03G002358	Wax gourd	cucwgoB406

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G030030	Silver-seed gourd	carcucB0510
CsaV3_4G030030	Silver-seed gourd	carcucB0551
CsaV3_4G030030	Cucurbita maxima (Rimu)	cmacucB0793
CsaV3_4G030030	Wax gourd	cucwgoB398
CsaV3_4G030030	Wax gourd	cucwgoB418
CsaV3_4G030030	Wax gourd	cucwgoB419