CmoCh03G000080 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh03G000080
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	VQ motif-containing protein, putative
Location	Cmo_Chr03 : 114564 .. 115053 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGGGAGGCAGCCAAAGTTGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCGACATGACAACGTTTCGAGAGGTTGTACAACGTCTAATCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAAGTTGCAAATTGTGAAACCATGTCCTTCCCATTTCAAGTCGGACAAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTTGAAGATCTTGTCAAAGCTGTCGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATGCTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

mRNA sequence

ATGGAGAAGGGAGGCAGCCAAAGTTGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCGACATGACAACGTTTCGAGAGGTTGTACAACGTCTAATCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAATCGGACAAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTTGAAGATCTTGTCAAAGCTGTCGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATGCTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

Coding sequence (CDS)

ATGGAGAAGGGAGGCAGCCAAAGTTGTGTCGTGTGTACACCTTTGACGACGTTCATACAGACCGACATGACAACGTTTCGAGAGGTTGTACAACGTCTAATCGGGCCATCAGAAACCCACACGCCACCATCGAAAGCAGTTGGATCAAAGAGGTCAACTACGACCTCCAAACTCCATGAAAGGAGACACTTGACTAGACCAAAATCGGACAAGCATCCTAGCTACGTTACGAGCCCGGTCAGGACGCCTTTGAAGATCTTGTCAAAGCTGTCGATGGGGGAGGACGAGAAGGAGTCGAATAAGGTGGAAGAAGAGAAGGCAATCAAAGAAAGGGGATTCTATTTGCATCCATCTCTAAGGTCAAAGCTTGGCTATGCTCAACCAGAGTTGCTTTCATTATTTCCTTTGGAATCTCCCAAACCAACTCAGCGCAATGAAACAAAAAAGAATTAA

Homology

[Close]

BLAST of CmoCh03G000080 vs. Swiss-Prot
Match: VQ31_ARATH (VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.0e-27
Identity = 79/164 (48.17%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 3   KGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QTD  TFRE+VQRL GP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKSD--KHP-----------------SYVTSPVRTPLKILSKLSMGEDEKE 122
           LHERR   RPK +  K P                 + +TSPV TP  + S LS+ E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESP 140
           S   N  EEEKAIKER FYLHPS RSK GY +PELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of CmoCh03G000080 vs. Swiss-Prot
Match: VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-07
Identity = 55/162 (33.95%), Postives = 74/162 (45.68%), Query Frame = 1


Query: 14  PLTTFIQTDMTTFREVVQRLIG-PSETHTPPSKAVGSKRSTT-------TSKLHERR--- 73
           P T F+Q D + FR +VQ+L G P +  +    AV +              KLHERR   
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSS 72

Query: 74  --------HLTRPK---SDKHPSYVTSPVRTPLKILSKLSMGEDEKESNKV---EEEKAI 133
                   ++T P    S  H  ++ SPV       +++S     +E +     EE+KAI
Sbjct: 73  KKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAI 132

Query: 134 KERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQRNETKKN 151
            E+GFY  PS RS    A PELL LFPL SP  T     + N
Sbjct: 133 AEKGFYFLPSPRSGSEPA-PELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of CmoCh03G000080 vs. TrEMBL
Match: A0A0A0KZ05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-45
Identity = 110/166 (66.27%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QTD  TFREVVQRL GPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKSD--------------KHPSYVTSPVRTPLKILSKLSMGEDEKES-NKVEE 120
           RR L TRPK                +HPSY+TSP+ TP KILSKLS+G++EKE  N +EE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   YAQPELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of CmoCh03G000080 vs. TrEMBL
Match: A0A067EY24_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-30
Identity = 88/173 (50.87%), Postives = 103/173 (59.54%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QTD  TFREVVQRL GPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKSD-----------------KHPSYVTSPVRTPLKILSKLSMGEDEKE 120
           SKLHERR  TRPK +                   PS+  SPV TP  I +KLS+ EDE +
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 S-------NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
                   N  EEEKAIKER FYLHPS RS+ GY +PELL+LFPL SP+ ++R
Sbjct: 121 VESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSER 171

[Close]

BLAST of CmoCh03G000080 vs. TrEMBL
Match: V4SRC0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.6e-30
Identity = 88/173 (50.87%), Postives = 103/173 (59.54%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QTD  TFREVVQRL GPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKSD-----------------KHPSYVTSPVRTPLKILSKLSMGEDEKE 120
           SKLHERR  TRPK +                   PS+  SPV TP  I +KLS+ EDE +
Sbjct: 61  SKLHERRQYTRPKLEIVKPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 S-------NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
                   N  EEEKAIKER FYLHPS RS+ GY +PELL+LFPL SP+ ++R
Sbjct: 121 VESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSER 171

[Close]

BLAST of CmoCh03G000080 vs. TrEMBL
Match: A0A067JK32_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.6e-28
Identity = 84/168 (50.00%), Postives = 101/168 (60.12%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETH----TPPSKAVGSKRSTTTS 60
           MEK  SQ+   C P+TTF+QTD   FRE+VQRL GPSE+     T  +K  G +R T  S
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRPT--S 60

Query: 61  KLHERRH-----------------LTRPKSDKHPSYVTSPVRTPLKILSKLSMGEDE--- 120
           KLHERR                  LT P + ++PS + SPV TP  I SKLS+ E E   
Sbjct: 61  KLHERRQHLRPKLEIIKPPVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELEDKI 120

Query: 121 KESNKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
            E N  EEEKAIKER FYLHPS RS+ GYA+P LL+LFPL SP   ++
Sbjct: 121 SELNSEEEEKAIKERRFYLHPSPRSRPGYAEPVLLTLFPLRSPTTIEK 166

[Close]

BLAST of CmoCh03G000080 vs. TrEMBL
Match: D7M1E3_ARALL (VQ motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_908821 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.9e-26
Identity = 77/150 (51.33%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETH----TPPSKAVGSK-RSTTT 60
           M   GSQ+   C P+TTF+QTD  TFRE+VQRL GPSE +    TP +  + +  +   T
Sbjct: 1   MNNKGSQNVATCKPVTTFVQTDTNTFREIVQRLTGPSENNAAAATPEATVIKTAIQKRPT 60

Query: 61  SKLHERRHLTRPKSDKHPSYVTSPVRTPLKILSKLSMGEDEKE------SNKVEEEKAIK 120
           SKLHERR   RP          +PV TP  + S LS+ E EK       +N  EEEKAIK
Sbjct: 61  SKLHERRQCMRP----------NPVGTPSSLFSNLSLIEGEKAEPDSCTTNIEEEEKAIK 120

Query: 121 ERGFYLHPSLRSKLGYAQPELLSLFPLESP 140
           ER FYLHPS RSK GY +PELL+LFPL SP
Sbjct: 121 ERRFYLHPSPRSKPGYTEPELLTLFPLASP 140

[Close]

BLAST of CmoCh03G000080 vs. TAIR10
Match: AT5G08480.2 (AT5G08480.2 VQ motif-containing protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.2e-28
Identity = 79/164 (48.17%), Postives = 96/164 (58.54%), Query Frame = 1


Query: 3   KGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETH----TPPSKAVGSK-RSTTTSK 62
           KG       C P+TTF+QTD  TFRE+VQRL GP+E +    TP +  + +  +   TSK
Sbjct: 4   KGSQNVATTCKPVTTFVQTDTNTFREIVQRLTGPTENNAAAATPEATVIKTAIQKRPTSK 63

Query: 63  LHERRHLTRPKSD--KHP-----------------SYVTSPVRTPLKILSKLSMGEDEKE 122
           LHERR   RPK +  K P                 + +TSPV TP  + S LS+ E E +
Sbjct: 64  LHERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEPD 123

Query: 123 S---NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESP 140
           S   N  EEEKAIKER FYLHPS RSK GY +PELL+LFPL SP
Sbjct: 124 SCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFPLTSP 167

[Close]

BLAST of CmoCh03G000080 vs. TAIR10
Match: AT1G80450.1 (AT1G80450.1 VQ motif-containing protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.0e-08
Identity = 55/162 (33.95%), Postives = 74/162 (45.68%), Query Frame = 1


Query: 14  PLTTFIQTDMTTFREVVQRLIG-PSETHTPPSKAVGSKRSTT-------TSKLHERR--- 73
           P T F+Q D + FR +VQ+L G P +  +    AV +              KLHERR   
Sbjct: 13  PNTMFVQADPSNFRNIVQKLTGAPPDISSSSFSAVSAAHQKLPLTPKKPAFKLHERRQSS 72

Query: 74  --------HLTRPK---SDKHPSYVTSPVRTPLKILSKLSMGEDEKESNKV---EEEKAI 133
                   ++T P    S  H  ++ SPV       +++S     +E +     EE+KAI
Sbjct: 73  KKMELKVNNITNPNDAFSHFHRGFLVSPVSHLDPFWARVSPHSAREEHHAQPDKEEQKAI 132

Query: 134 KERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQRNETKKN 151
            E+GFY  PS RS    A PELL LFPL SP  T     + N
Sbjct: 133 AEKGFYFLPSPRSGSEPA-PELLPLFPLRSPNGTNHRIHEDN 173

[Close]

BLAST of CmoCh03G000080 vs. TAIR10
Match: AT1G28280.1 (AT1G28280.1 VQ motif-containing protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 29/68 (42.65%), Postives = 38/68 (55.88%), Query Frame = 1


Query: 73  PSYVTSPVRTPLKILSKLSMGEDEKESNKVEEEKAIKERGFYLHPSLRSKLGYAQPELLS 132
           PS V SPV   +      S   ++  +    EEKA+KERGFYLHPS  +     +P LL 
Sbjct: 170 PSLVLSPVTPLIPDPFDRSGSSNQSPNELAAEEKAMKERGFYLHPSPATTPMDPEPRLLP 229

Query: 133 LFPLESPK 141
           LFP+ SP+
Sbjct: 230 LFPVTSPR 237

[Close]

BLAST of CmoCh03G000080 vs. NCBI nr
Match: gi|659069434|ref|XP_008449818.1| (PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo])

HSP 1 Score: 198.4 bits (503), Expect = 9.1e-48
Identity = 114/166 (68.67%), Postives = 124/166 (74.70%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKGGSQS V C PLTTF+QTD  TFREVVQRL GPSE+HT  SK VGS+R TTTSKLHE
Sbjct: 1   MEKGGSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTMSSKGVGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPK--------------SDKHPSYVTSPVRTPLKILSKLSMGEDEKES-NKVEE 120
           RRHL TRPK              + +H SY+TSPV TP KILSKLS+G++EKE  N  EE
Sbjct: 61  RRHLITRPKLQIVKPCPSYFKATTSEHLSYITSPVGTPSKILSKLSIGDEEKEELNNKEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   YAQPELLSLFPLESPK   +NETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMAVYAQPELLSLFPLESPKNVSKNETKIN 166

[Close]

BLAST of CmoCh03G000080 vs. NCBI nr
Match: gi|700199595|gb|KGN54753.1| (hypothetical protein Csa_4G448640 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-45
Identity = 110/166 (66.27%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPPSKAVGSKRSTTTSKLHE 60
           MEKG SQS V C PLTTF+QTD  TFREVVQRL GPSE+HT  SK  GS+R TTTSKLHE
Sbjct: 1   MEKGDSQSHVGCKPLTTFVQTDTKTFREVVQRLTGPSESHTTSSKGFGSRRPTTTSKLHE 60

Query: 61  RRHL-TRPKSD--------------KHPSYVTSPVRTPLKILSKLSMGEDEKES-NKVEE 120
           RR L TRPK                +HPSY+TSP+ TP KILSKLS+G++EKE  N +EE
Sbjct: 61  RRQLITRPKLQIVKPCPSHFKATIGEHPSYITSPLGTPSKILSKLSIGDEEKEELNNMEE 120

Query: 121 EKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQRNETKKN 151
           EKAIKER FYLHPS RS   YAQPELLSLFPLESPK    +ETK N
Sbjct: 121 EKAIKERRFYLHPSPRSMPIYAQPELLSLFPLESPKKVSNHETKIN 166

[Close]

BLAST of CmoCh03G000080 vs. NCBI nr
Match: gi|568823627|ref|XP_006466212.1| (PREDICTED: VQ motif-containing protein 31 [Citrus sinensis])

HSP 1 Score: 139.0 bits (349), Expect = 6.6e-30
Identity = 88/173 (50.87%), Postives = 103/173 (59.54%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QTD  TFREVVQRL GPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKSD-----------------KHPSYVTSPVRTPLKILSKLSMGEDEKE 120
           SKLHERR  TRPK +                   PS+  SPV TP  I +KLS+ EDE +
Sbjct: 61  SKLHERRQYTRPKLEIVNPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 S-------NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
                   N  EEEKAIKER FYLHPS RS+ GY +PELL+LFPL SP+ ++R
Sbjct: 121 VESAISALNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSER 171

[Close]

BLAST of CmoCh03G000080 vs. NCBI nr
Match: gi|567867567|ref|XP_006426406.1| (hypothetical protein CICLE_v10026619mg [Citrus clementina])

HSP 1 Score: 139.0 bits (349), Expect = 6.6e-30
Identity = 88/173 (50.87%), Postives = 103/173 (59.54%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETHTPP-----SKAVGSKRSTTT 60
           ME   SQ    C PLTTF+QTD  TFREVVQRL GPSE++T       +K  G KR T  
Sbjct: 1   MENPASQGAAGCKPLTTFVQTDTNTFREVVQRLTGPSESNTASQDRAAAKVAGIKRQT-- 60

Query: 61  SKLHERRHLTRPKSD-----------------KHPSYVTSPVRTPLKILSKLSMGEDEKE 120
           SKLHERR  TRPK +                   PS+  SPV TP  I +KLS+ EDE +
Sbjct: 61  SKLHERRQYTRPKLEIVKPPIIFKPGSSPSKSGTPSFPASPVGTPSTIFAKLSIMEDENK 120

Query: 121 S-------NKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
                   N  EEEKAIKER FYLHPS RS+ GY +PELL+LFPL SP+ ++R
Sbjct: 121 VESAISAFNSQEEEKAIKERRFYLHPSPRSRPGYTEPELLTLFPLTSPRTSER 171

[Close]

BLAST of CmoCh03G000080 vs. NCBI nr
Match: gi|802752957|ref|XP_012088377.1| (PREDICTED: VQ motif-containing protein 31 [Jatropha curcas])

HSP 1 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 84/168 (50.00%), Postives = 101/168 (60.12%), Query Frame = 1


Query: 1   MEKGGSQSCVVCTPLTTFIQTDMTTFREVVQRLIGPSETH----TPPSKAVGSKRSTTTS 60
           MEK  SQ+   C P+TTF+QTD   FRE+VQRL GPSE+     T  +K  G +R T  S
Sbjct: 1   MEKPASQAPAGCKPVTTFVQTDTNAFREIVQRLTGPSESDAVQGTAATKVAGIRRPT--S 60

Query: 61  KLHERRH-----------------LTRPKSDKHPSYVTSPVRTPLKILSKLSMGEDE--- 120
           KLHERR                  LT P + ++PS + SPV TP  I SKLS+ E E   
Sbjct: 61  KLHERRQHLRPKLEIIKPPVNFKPLTSPTTSRNPSLLPSPVGTPSTIFSKLSIQELEDKI 120

Query: 121 KESNKVEEEKAIKERGFYLHPSLRSKLGYAQPELLSLFPLESPKPTQR 145
            E N  EEEKAIKER FYLHPS RS+ GYA+P LL+LFPL SP   ++
Sbjct: 121 SELNSEEEEKAIKERRFYLHPSPRSRPGYAEPVLLTLFPLRSPTTIEK 166

The following BLAST results are available for this feature:

BLAST of CmoCh03G000080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ31_ARATH	4.0e-27	48.17	VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1	[more]
VQ11_ARATH	3.5e-07	33.95	VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1	[more]

BLAST of CmoCh03G000080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ05_CUCSA	1.7e-45	66.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G448640 PE=4 SV=1	[more]
A0A067EY24_CITSI	4.6e-30	50.87	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0307201mg PE=4 SV=1	[more]
V4SRC0_9ROSI	4.6e-30	50.87	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026619mg PE=4 SV=1	[more]
A0A067JK32_JATCU	9.6e-28	50.00	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1	[more]
D7M1E3_ARALL	6.9e-26	51.33	VQ motif-containing protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_90...	[more]

BLAST of CmoCh03G000080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08480.2	2.2e-28	48.17	VQ motif-containing protein	[more]
AT1G80450.1	2.0e-08	33.95	VQ motif-containing protein	[more]
AT1G28280.1	1.9e-06	42.65	VQ motif-containing protein	[more]

BLAST of CmoCh03G000080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659069434\|ref\|XP_008449818.1\|	9.1e-48	68.67	PREDICTED: uncharacterized protein LOC103491589 [Cucumis melo]	[more]
gi\|700199595\|gb\|KGN54753.1\|	2.5e-45	66.27	hypothetical protein Csa_4G448640 [Cucumis sativus]	[more]
gi\|568823627\|ref\|XP_006466212.1\|	6.6e-30	50.87	PREDICTED: VQ motif-containing protein 31 [Citrus sinensis]	[more]
gi\|567867567\|ref\|XP_006426406.1\|	6.6e-30	50.87	hypothetical protein CICLE_v10026619mg [Citrus clementina]	[more]
gi\|802752957\|ref\|XP_012088377.1\|	1.4e-27	50.00	PREDICTED: VQ motif-containing protein 31 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh03G000080.1	CmoCh03G000080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 16..33 score: 7.
None	No IPR available	PANTHER	PTHR33402	FAMILY NOT NAMED	coord: 12..146 score: 4.5
None	No IPR available	PANTHER	PTHR33402:SF2	SUBFAMILY NOT NAMED	coord: 12..146 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh03G000080	Cucsa.170100	Cucumber (Gy14) v1	cgycmoB0484
CmoCh03G000080	Cla001183	Watermelon (97103) v1	cmowmB629
CmoCh03G000080	Csa4G448640	Cucumber (Chinese Long) v2	cmocuB660
CmoCh03G000080	MELO3C003285	Melon (DHL92) v3.5.1	cmomeB611
CmoCh03G000080	ClCG04G002670	Watermelon (Charleston Gray)	cmowcgB586
CmoCh03G000080	CSPI04G19680	Wild cucumber (PI 183967)	cmocpiB673
CmoCh03G000080	Lsi01G020480	Bottle gourd (USVL1VR-Ls)	cmolsiB589
CmoCh03G000080	Cp4.1LG10g12290	Cucurbita pepo (Zucchini)	cmocpeB606
CmoCh03G000080	MELO3C003285.2	Melon (DHL92) v3.6.1	cmomedB698
CmoCh03G000080	CsaV3_4G030030	Cucumber (Chinese Long) v3	cmocucB0784
CmoCh03G000080	Cla97C04G070150	Watermelon (97103) v2	cmowmbB660
CmoCh03G000080	Bhi03G002358	Wax gourd	cmowgoB0801
CmoCh03G000080	CsGy4G018530	Cucumber (Gy14) v2	cgybcmoB511

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh03G000080	Silver-seed gourd	carcmoB0702
CmoCh03G000080	Cucumber (Chinese Long) v3	cmocucB0778
CmoCh03G000080	Wax gourd	cmowgoB0789
CmoCh03G000080	Cucurbita maxima (Rimu)	cmacmoB658
CmoCh03G000080	Wild cucumber (PI 183967)	cmocpiB667
CmoCh03G000080	Cucumber (Chinese Long) v2	cmocuB663
CmoCh03G000080	Melon (DHL92) v3.5.1	cmomeB612
CmoCh03G000080	Bottle gourd (USVL1VR-Ls)	cmolsiB585
CmoCh03G000080	Cucumber (Gy14) v2	cgybcmoB504
CmoCh03G000080	Melon (DHL92) v3.6.1	cmomedB701