Cucsa.375320 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.375320
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Nijmegen breakage syndrome 1, putative isoform 1
Location	scaffold03746 : 283562 .. 287661 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCTCATTACATAGTTGAAAGTCCCTTCGTGGACTTGATTTTTATATGTTCTTGTATTCTTTTATTTCTTTGTTAATGAAAACAGTTGTTTCTATCCTTGAAGAAAACTCCTTGTTCTTCACTCTTTTCTATCTGTGCACTGACCATTGCCAAGCATTTTTAGTATCTGCACCTGCATCGATCCTCATTATTTGTCCTGAATTTGTTGAAGAAGATGTTTCTGATGCTTTCTATTTCTAGACTCATGCTATCAATAAAAACACGAGAGAAGTGAGATTCTGCTTTCTTTCTGATTGTTACACTTCAGTTATTTTCAGGAAAAACCACCTGCAATGAGATTCCATCCTTTGATTCGTGAGTGCTGCCTTTTAAGTTCAGTTGGGAACAAATTATTATGAAGTAATAGTAAATATTTTTTGAACTCCTGCATTTCACTCGCTTTTGTCTTTGTTCTTTGAATCAGCTATCAACCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGTAATGCTATATGTTTCAATTTCAGTCTGTCTTTTCATTTTCACATTTTCTGAGAGTTGCTGGACAATCCTCTAATGAATGAATTATAAAATAAATTAGCTTTATTTATAATTCATTCATCTTCCATTGTTTATGGCAAGTCTCACTGTTTTTGAGCGTTTTGCACACTTGAAGGCGTCTACTTATTCAACATATCTGCCTTAACCAGAATGCCTTTATCTCTCATGGAACTTAAGTCTTATCCAAGATACTTGGACGCAAGTGGTGTTTAGTACTATTCCTTAGGTTTCTGTCTGCTTATTTTTGGAACTTAAGAAATAAATGTGAGGCTACTGGTTGGGGATACAGGATATTGTGGAAATGGTAGTTGGTTATTGGTAAGGGACTAAGGGTATGGTGGTTATTAGTTAGGGAGGTGTTGTAGAGTTTAGGATATAAATAGAGAGTGGGGGAAATTTGGGTTGGGAGAGGTCTCAAGAGAGAGGGTGGGAGGGGGTGGAAGTGCCTCGAATTACTTGTTTATCTCTTAGGTGGGAGAGAGAAAAAAAAGTAATTTCTTTCATTCCAGATTGATGCAATTATTGTATAATAGAGGAGGCAACATATATATAGATTACAAGGGTAATTAAATCTTAACCACCTAACTCCGGACATTCTCTTATAATATATGTTTGCTCGTAAACCATATAATCTAAACAATTCCAACAACTTCAAACTAAAACTAATTCAATAGTAGCGATGCAAGAAAGTTGTTTTCTGTCATGTTGGGTCTGGACAGTTATTAGAAGTTGTATGTTTGTGTTTGGTATCCAGATTAGGATTTAAGTGAAGTAGCTAGCTACCTACCTATGAGAAAACCATCTTATGCTTTGTTTTGTGTGGGGGGAGTTCAAACCTCTCTAATATATGGGTTGCATGGAACTTTCCTGAATGTTTGTGAATAATCTCTAAAGTCTCAACTAGGCAGTCTTTATCTCTCAACCAGCACCCTAGGCCCTGTTCTGTTTTGGTGACATTGTTTTGCATTTTGACAGCTTCGTTTTCCCCTCTCTGGCCAGCCTTCTTTGGAGCATAACTTATATTTTCTTTGGGTCTAGTTTACACAGTAGCAGCTTTTGCTTTTGTTTACAGGTTCAGCCTTTGTACTGCTTTGTTTGCCTCATTTCCTTTTCTTTATTTTTCTTTATTTCTCTGTCTCAGCTTCTGTATTAGGCTGGATTATGTCTCCATTGTACTTTGGCATTTTTTATTTCTAGCTTTAATTGGGATTGTTTTGATGCTAAGAGGTGTCAACCTAGTTGAGATGTCTGGATGCACCTTCTGATCCCCCGCTTATTGCTTTCTAGGCTTCTTTATTACGCTCATTGTATAACTCTCTTGTACTTTGAGTTATTGTTAATAAAGTAGTTTGTCTCCGTTTCAAAAAAATCTCTGAAGTTGAGTTCTTATTAAAAAAGAATCTTTTGTCTCCGTTTCAAAAAAAAAAAAACTGAAATCTGAATTTTCTGTTTCGTATTTCTAGTTTTTGACATTCATTTTTCTAAAATTTAGCAGTACAAGTATGGGGATCGGTTGAAGATGTTATTACAACAAGTTGGTGGTGCGAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGTATGAGGCTCTACCTCTTCTCACCTATACTGTATCCATCTTTTCCTAATTTCTTCTGAAGGCGTGGATAAACACTTTTATTTGACAATTTCATGTAAAATAATCTAAGTCACATTATTTCTAATAGCAATGTGGGAATTTTTCTAGTACTACGGAAGTACTCTACTCCCTTTGTTCACTCTATAAATTGGTCTTCATAAAACATCAACATATGCATAACATTTTTACTCATGAATTAGTAATTGTGTTCCAAACGGTAATGCTTCAGTTGTTAACAGTGTTTGGAAATATGTTCCAAATGGTGCTCTATGTAGTCTGTGATTAGAAAAAATATAACGGGTTGAAGTCTTTATTCCATTTCTTTTGTTTATCTCAATTCTGTGAACTTGGTGTTTGTTGGGCATTGATTTGCATGATAACTTTTGTAGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGGTAAGCAGTCTTCTTCACTGCTACTTTCTCTAGTAGTATATTTTTCTAGTGATAATTGATAAGTTACGGTTGATTTCTCGATTTTAACTTCATTTGTCTAGCTGAATGTAGAGTTTCCTTGCAGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAGTATTGCTCTTTGCCTTTGAACGTCTTTTCCTGCATCATTCCATTTTAAATGGTGTGCAAATTATTGCTTCATGTTGATGAGATCTCAGCCATTATATATTTTTGCTCATCTTGAATGATGATCGTGATCATGTTGGCATTCAACTGTCAGTATGTTGGTTTAGGAATCAGTGGAAACAGATACTTTTGCCTCAAATATGCTTAGCAATGAAAACTTTCTTGTGTCGGTTGGCATATGGAGGAAAATATTATGGAAGTTGGTACTCATCACTCATGTCCTTAAAACTTTTTTGCAGACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGTAAGTGTTTCTCTTGCTCTCTTTCTTTCTTTCTTTCCCCCTTTGAAGTGTTTTAAGATGTCACTAGATTTATTGCCTTTTTGTGGCTTTTTTTGGCCAAGCTTGATTGTTTTGGATTGAGGTCCCCTTTTCTTTGATGGTATCATCTAACATTTTCTTATGACTTTGTAGGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGTGAGTCTTTTCTAACTTTAGCATCATAAGTTAATAGACAAGGAATACTTTAGGCTTGGGACATAAGTTTTTAACTTGATCAAATTTCAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTT

mRNA sequence

tagctcattacatagttgaaagtcccttcgtggacttgatttttatatgttcttgtattcttttatttctttgttaatgaaaacagttgtttctatCCTTGAAGAAAACTCCTTGTTCTTCACTCTTTTCTATCTGTGCACTGACCATTGCCAAGCATTTTTAGTATCTGCACCTGCATCGATCCTCATTATTTGTCCTGAATTTGTTGAAGAAGATGTTTCTGATGCTTTCTATTTCTAGACTCATGCTATCAATAAAAACACGAGAGAAGTGAGATTCTGCTTTCTTTCTGATTGTTACACTTCAGTTATTTTCAGGAAAAACCACCTGCAATGAGATTCCATCCTTTGATTCCTATCAACCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTT

Coding sequence (CDS)

ATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAA

Protein sequence

MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS*

Homology

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BLAST of Cucsa.375320 vs. Swiss-Prot
Match: NBS1_ARATH (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.6e-44
Identity = 117/330 (35.45%), Postives = 182/330 (55.15%), Query Frame = 1


Query: 3   VEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSSDS 62
           VE   V V++ N R+ CL G+TF+L    + Y++G     LL +V GA  ++IED SS S
Sbjct: 218 VEEALVDVLELNVREKCLEGFTFVLEPTDT-YRFGCSFPSLL-EVCGAETVTIEDISSMS 277

Query: 63  QDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 122
           QD   GE +R++ V+P  + +K      +    ++ E+ L+ +V SG L   +LI P   
Sbjct: 278 QDSQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVV 337

Query: 123 GSSTCSTDETVVAESDLETETS-----------------KPAVSNVQGPDAYVSKSDEYL 182
            SS+CSTDETVVA+S+ E E +                 KPA   ++     + +    L
Sbjct: 338 ISSSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNL 397

Query: 183 SRPLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPS 242
           +    SV+        GH   KNS   + +R+D+ DE+++   +II++Q+LIV+      
Sbjct: 398 NE-FKSVNLLADTESRGHMDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTR 457

Query: 243 TLVTAENNG-INFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKE 302
            + +    G ++FKRFRK     GNSF++L+PF K PYK+      ++ + +KEE++RK+
Sbjct: 458 KVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQ 517

Query: 303 TEAIAEDLFHNEKGRRRGMAGSLQELFTRS 315
            EAIAEDLF  EK R+RG AGS++   + S
Sbjct: 518 MEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

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BLAST of Cucsa.375320 vs. Swiss-Prot
Match: NBS1_ORYSJ (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-41
Identity = 106/342 (30.99%), Postives = 189/342 (55.26%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +T++GM ++VV+    ++CL+GYTF+LG+++ +YK+GD+L  LL+  G A  L +++F +
Sbjct: 211 LTLDGMEIQVVEIKLIESCLAGYTFILGSSE-KYKFGDKLHALLESTG-AKYLHVDEFCA 270

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           +SQD G GEND+ + ++P  S  +      +    KIT++ L +++LSG L+   +  P 
Sbjct: 271 NSQDSGAGENDKDILLVPAKSPLEFSKIRGLFPLSKITDVKLFAAILSGHLEATAIEPPA 330

Query: 121 EPGSSTCSTDETVVAESDLE------------------------------TETSKPAVSN 180
              +S+ STDET+V +SD+E                                + + AV+ 
Sbjct: 331 YIVASSNSTDETIVVDSDVEIDTATSDHTVAASKSEHHIEHISDDKKEVVAISEEDAVNL 390

Query: 181 VQGPDAYVSKSDEY---LSRPL---ISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESD 240
           V+   +    SD+    + +P+   + V   T    G     ++     ++ KD+  +S 
Sbjct: 391 VEAKTSINLHSDQEKDEIVKPMEEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSR 450

Query: 241 SRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVPFDKYPYKD 300
                +I++QNL+V+   + +   + E  GINFKRFRK    SGNSF +L+P+ + PY++
Sbjct: 451 DETCHVIYTQNLVVKSILQSARAESIETGGINFKRFRKRGAVSGNSFKDLIPYSREPYRE 510

Query: 301 NGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGS 307
           +   R  + + ++EE++R++ EAIAEDLF+N K +++  AGS
Sbjct: 511 SDYERGTVTDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550

[Close]

BLAST of Cucsa.375320 vs. Swiss-Prot
Match: NBS1_ORYSI (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 54/144 (37.50%), Postives = 96/144 (66.67%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +T++GM ++VV+    ++CL+GYTF+LG+++ +YK+GD+L  LL+  G A  L +++F +
Sbjct: 211 LTLDGMEIQVVEIKLIESCLAGYTFILGSSE-KYKFGDKLHALLESTG-AKYLHVDEFCA 270

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           +SQD G GEND+ + ++P  S  +      +    KIT++ L +++LSG L+   +  P 
Sbjct: 271 NSQDSGAGENDKDILLVPAKSPLEFSKISGLFPLSKITDVKLFAAILSGHLEATAIEPPA 330

Query: 121 EPGSSTCSTDETVVAESDLETETS 145
              +S+ STDET+V +SD+E +T+
Sbjct: 331 YIVASSNSTDETIVVDSDVEIDTA 352

HSP 2 Score: 95.9 bits (237), Expect = 8.4e-19
Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 197 KDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVP 256
           KD+  +S      +I++QNL+V+   + +   + E  GINFKRFRK    SGNSF +L+P
Sbjct: 441 KDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGINFKRFRKRGAVSGNSFKDLIP 500

Query: 257 FDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGS 307
           + + PY+++   R  + + ++EE++R++ EAIAEDLF+N K +++  AGS
Sbjct: 501 YSREPYRESDYKRGTVIDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550

[Close]

BLAST of Cucsa.375320 vs. TrEMBL
Match: A0A0A0LA01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1)

HSP 1 Score: 614.8 bits (1584), Expect = 6.0e-173
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS YKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 196 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS-YKYGDRLKMLLQQVGGANVLSIEDFSS 255

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 256 DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 315

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSV
Sbjct: 316 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSV 375

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 240
           GGHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF
Sbjct: 376 GGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 435

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 300
           RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 436 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 495

Query: 301 RGMAGSLQELFTRS 315
           RGMAGSLQELFTRS
Sbjct: 496 RGMAGSLQELFTRS 508

[Close]

BLAST of Cucsa.375320 vs. TrEMBL
Match: A0A067K4W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.9e-66
Identity = 148/318 (46.54%), Postives = 209/318 (65.72%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +TV+G  VKV D  TR NCL GYTFLL +  + YK+GDRL+ LL+ +GGA V+ IE+F S
Sbjct: 209 LTVKGAPVKVADSITRANCLKGYTFLLESV-NMYKFGDRLRSLLE-LGGAKVIFIEEFCS 268

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
            SQ L  GEN R+V V+P GS +K     K+ S  ++ E+ ++ +V+SG LD   LI P 
Sbjct: 269 SSQGLDYGENLRMVCVIPQGSTDKFGHFSKLSSLSRVNEVDVLCAVVSGYLDSSMLILPT 328

Query: 121 EPGSSTCSTDETVVAESDLETE-TSKPAVSNV---QGPDAYVSKSDEYLSRPLISVDNAT 180
              SS+CSTDETVVA+SD E E TS  A +N+   + P             P I + +  
Sbjct: 329 VLVSSSCSTDETVVADSDEEVETTSVHATANICKEEAPKCGNKVEISTFQHPPIKLGDTH 388

Query: 181 TGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI- 240
             S  G+        ++  +++K+DE +S N DII+SQ+LIV+    P+T  +  N+G+ 
Sbjct: 389 VASTTGNH------GEMLGKREKVDEPESTNSDIIYSQDLIVRDWHVPATTRSTTNDGVL 448

Query: 241 NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHN 300
           NFKRF+K  T SGNSFN+L+PF K+PYKD+  G +E+ +S+KEER+RK+ EA+AEDLF+N
Sbjct: 449 NFKRFKKKNTQSGNSFNSLIPFSKHPYKDSDYGNQEMVDSVKEERKRKQMEAVAEDLFNN 508

Query: 301 EKGRRRGMAGSLQELFTR 314
           EKGRRRG+AGS++ + +R
Sbjct: 509 EKGRRRGVAGSIRSILSR 518

[Close]

BLAST of Cucsa.375320 vs. TrEMBL
Match: B9SIQ5_RICCO (Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.9e-65
Identity = 152/319 (47.65%), Postives = 211/319 (66.14%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +TVEG+ VKVVD  TR NCL GYTFLL  + + YK+GDRL+ +L+ VGGAN++ IE+F S
Sbjct: 212 LTVEGVPVKVVDSVTRANCLKGYTFLL-ESLNMYKFGDRLQAMLE-VGGANIVFIEEFYS 271

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
            ++ L   EN R+V V+P GS +K     K+ S  ++ E+ L+ +V+SG LD   LI P 
Sbjct: 272 SNEGLDYKENFRMVCVIPQGSADKFGRFSKLSSLSRVNEVDLLYAVVSGHLDLSKLILPT 331

Query: 121 EPGSSTCSTDETVVAESDLETET-SKPAVSNV-QGPDAYVSKSDEYLSRPLIS---VDNA 180
              SS+CSTDETVVA+SD E ET S  A +N+      +V+K +    +  +    VDN 
Sbjct: 332 VVVSSSCSTDETVVADSDEEVETMSTHATANICSEAPKFVNKVETSPIQAKVETSPVDNP 391

Query: 181 TTGSVGGHETVKNSCSDIEM--RKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENN 240
            T     H  V++  ++I M  +++K+DE +S N DII+SQNLI++    P  + +    
Sbjct: 392 CTKLEDRH-VVRSMGNNIGMTAKREKVDEPESANSDIIYSQNLIIRDWQLPVRISSTNER 451

Query: 241 GINFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLF 300
            I+FKRF+K QT SGNSFNNL+PF KY YKD+  G +E+  S+KEER+RK+ EAIAEDLF
Sbjct: 452 FIDFKRFKKKQTQSGNSFNNLIPFSKYSYKDSDPGNQEMLHSMKEERKRKQMEAIAEDLF 511

Query: 301 HNEKGRRRGMAGSLQELFT 313
           ++EKGRRRG AGS+  L +
Sbjct: 512 NSEKGRRRGGAGSICSLLS 527

[Close]

BLAST of Cucsa.375320 vs. TrEMBL
Match: B9IDC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-62
Identity = 144/319 (45.14%), Postives = 204/319 (63.95%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +TVEG+ VKV    TR  CL G+T LL +  + YK+ DRL+ LL+ V GA ++ +E+F S
Sbjct: 208 LTVEGVSVKVAASGTRAKCLEGFTCLLESI-NMYKFKDRLQSLLE-VCGAKIVLVEEFCS 267

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           +++ L  G++  VV V+P GS +K +   K+ S  ++ EL L+ +VL+G LD   L+ P 
Sbjct: 268 NAKGLDCGQDSHVVCVIPRGSPDKFNLFNKLGSLSRVNELDLLRAVLAGHLDLSVLVSPS 327

Query: 121 EPGSSTCSTDETVVAESDLETETSKPA-----VSNVQGPDAYVSKSDEYLSRPLISVDNA 180
              SS+CSTDETVVA+S+ E ET         +SN +G   YV+K +  +   L S +N 
Sbjct: 328 VLVSSSCSTDETVVADSEAEVETPTSEHFTADISN-EGAPKYVNKLEMSIDPHLRSENNH 387

Query: 181 TTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI 240
              S         S   +  +++ +DE++S N DII+SQ+LI++    P+ + +  NN +
Sbjct: 388 VVSST-------YSIGKMTAKRETVDEAESGNSDIIYSQDLIIRDLNLPAQISSTPNNEV 447

Query: 241 -NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFH 300
            NFKRFRK  T SGNSFNNL+PF KYPYKD   G +++ ES+KEE+RRK+ EAIAEDLF+
Sbjct: 448 LNFKRFRKGNTQSGNSFNNLIPFSKYPYKDFDYGNQDMLESVKEEKRRKQMEAIAEDLFN 507

Query: 301 NEKGRRRGMAGSLQELFTR 314
            EKGRRRG+AGSL  L TR
Sbjct: 508 TEKGRRRGVAGSLHVLLTR 516

[Close]

BLAST of Cucsa.375320 vs. TrEMBL
Match: M5W7W1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004302mg PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 6.2e-61
Identity = 143/313 (45.69%), Postives = 199/313 (63.58%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           +T EG+ VK+ DP TR+NCL GYTFLL +++  YK+ +RL+ LL+ V GA +L+I+ F+ 
Sbjct: 212 LTFEGVSVKLADPRTRENCLEGYTFLL-DSKPVYKFMNRLRSLLE-VSGAKILTIDGFNL 271

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           +SQ     ENDRVV V+P  S +  D   K+ S  ++ E  LIS +L+G LD   L  PC
Sbjct: 272 NSQSSDCRENDRVVCVIPEQSSD--DWFNKLGSLLRVNETGLISGILNGRLDPAMLKSPC 331

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
              SS+CSTDETVVA+SD E   +    +   G    V           IS + A   S 
Sbjct: 332 VVVSSSCSTDETVVADSDTEEIATSVLATASLGTKGVVENVPHE-----ISTNYAAPKSE 391

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKR 240
             +       SDI   + K+DES+S N+DII+SQ+LIV+ A+ P T+ T  N+ + NFKR
Sbjct: 392 DNYVMSCRRSSDISTVRGKLDESESGNVDIIYSQDLIVRDASIPYTVATTANHRVVNFKR 451

Query: 241 FRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 300
           FRK    SGNSFNN++PF KYPYKD+  G EE+ ES+KEE+RRK+ EA++E+LF+NE   
Sbjct: 452 FRKPNIQSGNSFNNIIPFLKYPYKDSDYGGEEVLESVKEEKRRKQMEAVSEELFNNEGRS 511

Query: 301 RRGMAGSLQELFT 313
           RRG+AGS++ + +
Sbjct: 512 RRGVAGSIRGILS 515

[Close]

BLAST of Cucsa.375320 vs. TAIR10
Match: AT3G02680.1 (AT3G02680.1 nijmegen breakage syndrome 1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-45
Identity = 117/330 (35.45%), Postives = 182/330 (55.15%), Query Frame = 1


Query: 3   VEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSSDS 62
           VE   V V++ N R+ CL G+TF+L    + Y++G     LL +V GA  ++IED SS S
Sbjct: 218 VEEALVDVLELNVREKCLEGFTFVLEPTDT-YRFGCSFPSLL-EVCGAETVTIEDISSMS 277

Query: 63  QDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 122
           QD   GE +R++ V+P  + +K      +    ++ E+ L+ +V SG L   +LI P   
Sbjct: 278 QDSQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVV 337

Query: 123 GSSTCSTDETVVAESDLETETS-----------------KPAVSNVQGPDAYVSKSDEYL 182
            SS+CSTDETVVA+S+ E E +                 KPA   ++     + +    L
Sbjct: 338 ISSSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNL 397

Query: 183 SRPLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPS 242
           +    SV+        GH   KNS   + +R+D+ DE+++   +II++Q+LIV+      
Sbjct: 398 NE-FKSVNLLADTESRGHMDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTR 457

Query: 243 TLVTAENNG-INFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKE 302
            + +    G ++FKRFRK     GNSF++L+PF K PYK+      ++ + +KEE++RK+
Sbjct: 458 KVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQ 517

Query: 303 TEAIAEDLFHNEKGRRRGMAGSLQELFTRS 315
            EAIAEDLF  EK R+RG AGS++   + S
Sbjct: 518 MEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

[Close]

BLAST of Cucsa.375320 vs. NCBI nr
Match: gi|778680802|ref|XP_011651398.1| (PREDICTED: nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus])

HSP 1 Score: 621.3 bits (1601), Expect = 9.2e-175
Identity = 312/314 (99.36%), Postives = 313/314 (99.68%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 211 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 270

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 271 DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 330

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSV
Sbjct: 331 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSV 390

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 240
           GGHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF
Sbjct: 391 GGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 450

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 300
           RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 451 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 510

Query: 301 RGMAGSLQELFTRS 315
           RGMAGSLQELFTRS
Sbjct: 511 RGMAGSLQELFTRS 524

[Close]

BLAST of Cucsa.375320 vs. NCBI nr
Match: gi|449456249|ref|XP_004145862.1| (PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus])

HSP 1 Score: 614.8 bits (1584), Expect = 8.6e-173
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS YKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 211 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS-YKYGDRLKMLLQQVGGANVLSIEDFSS 270

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 271 DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 330

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSV
Sbjct: 331 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSV 390

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 240
           GGHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF
Sbjct: 391 GGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 450

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 300
           RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 451 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 510

Query: 301 RGMAGSLQELFTRS 315
           RGMAGSLQELFTRS
Sbjct: 511 RGMAGSLQELFTRS 523

[Close]

BLAST of Cucsa.375320 vs. NCBI nr
Match: gi|700202671|gb|KGN57804.1| (hypothetical protein Csa_3G308200 [Cucumis sativus])

HSP 1 Score: 614.8 bits (1584), Expect = 8.6e-173
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS YKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 196 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS-YKYGDRLKMLLQQVGGANVLSIEDFSS 255

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 256 DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 315

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSV
Sbjct: 316 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSV 375

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 240
           GGHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF
Sbjct: 376 GGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 435

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 300
           RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 436 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 495

Query: 301 RGMAGSLQELFTRS 315
           RGMAGSLQELFTRS
Sbjct: 496 RGMAGSLQELFTRS 508

[Close]

BLAST of Cucsa.375320 vs. NCBI nr
Match: gi|659114410|ref|XP_008457039.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X3 [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 1.4e-162
Identity = 295/315 (93.65%), Postives = 303/315 (96.19%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDP+TRKNCLSGYTFLLG  Q QYKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 158 MTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMQYKYGDRLKMLLQQVGGANVLSIEDFSS 217

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 218 DSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPC 277

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKSDEYLSR L+SVDNATTGS+
Sbjct: 278 EPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSL 337

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKR 240
           GGHE VKNS SDIEMRKDKI+ESD+RNIDIIFSQNLIVQHATK STLVTAEN+GI NFKR
Sbjct: 338 GGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKR 397

Query: 241 FRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 300
           FRKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR
Sbjct: 398 FRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 457

Query: 301 RRGMAGSLQELFTRS 315
           RRGMAGSLQELFTRS
Sbjct: 458 RRGMAGSLQELFTRS 472

[Close]

BLAST of Cucsa.375320 vs. NCBI nr
Match: gi|659114412|ref|XP_008457040.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo])

HSP 1 Score: 580.9 bits (1496), Expect = 1.4e-162
Identity = 295/315 (93.65%), Postives = 303/315 (96.19%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 60
           MTVEGMHVKVVDP+TRKNCLSGYTFLLG  Q QYKYGDRLKMLLQQVGGANVLSIEDFSS
Sbjct: 109 MTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMQYKYGDRLKMLLQQVGGANVLSIEDFSS 168

Query: 61  DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
           DSQDLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 169 DSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPC 228

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKSDEYLSR L+SVDNATTGS+
Sbjct: 229 EPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSL 288

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKR 240
           GGHE VKNS SDIEMRKDKI+ESD+RNIDIIFSQNLIVQHATK STLVTAEN+GI NFKR
Sbjct: 289 GGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKR 348

Query: 241 FRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 300
           FRKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR
Sbjct: 349 FRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 408

Query: 301 RRGMAGSLQELFTRS 315
           RRGMAGSLQELFTRS
Sbjct: 409 RRGMAGSLQELFTRS 423

The following BLAST results are available for this feature:

BLAST of Cucsa.375320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NBS1_ARATH	2.6e-44	35.45	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1	[more]
NBS1_ORYSJ	2.7e-41	30.99	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=...	[more]
NBS1_ORYSI	3.1e-21	37.50	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 ...	[more]

BLAST of Cucsa.375320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA01_CUCSA	6.0e-173	99.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1	[more]
A0A067K4W4_JATCU	2.9e-66	46.54	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1	[more]
B9SIQ5_RICCO	1.9e-65	47.65	Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1	[more]
B9IDC7_POPTR	5.6e-62	45.14	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2	[more]
M5W7W1_PRUPE	6.2e-61	45.69	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004302mg PE=4 SV=1	[more]

BLAST of Cucsa.375320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02680.1	1.5e-45	35.45	nijmegen breakage syndrome 1	[more]

BLAST of Cucsa.375320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680802\|ref\|XP_011651398.1\|	9.2e-175	99.36	PREDICTED: nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus]	[more]
gi\|449456249\|ref\|XP_004145862.1\|	8.6e-173	99.04	PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus]	[more]
gi\|700202671\|gb\|KGN57804.1\|	8.6e-173	99.04	hypothetical protein Csa_3G308200 [Cucumis sativus]	[more]
gi\|659114410\|ref\|XP_008457039.1\|	1.4e-162	93.65	PREDICTED: uncharacterized protein LOC103496815 isoform X3 [Cucumis melo]	[more]
gi\|659114412\|ref\|XP_008457040.1\|	1.4e-162	93.65	PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0006310	DNA recombination
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0008152	metabolic process
biological_process	GO:0032501	multicellular organismal process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.375320.2	Cucsa.375320.2	mRNA
Cucsa.375320.1	Cucsa.375320.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.375320	Cla013203	Watermelon (97103) v1	cgywmB677
Cucsa.375320	Csa3G308200	Cucumber (Chinese Long) v2	cgycuB525
Cucsa.375320	MELO3C020249	Melon (DHL92) v3.5.1	cgymeB609
Cucsa.375320	ClCG05G011330	Watermelon (Charleston Gray)	cgywcgB640
Cucsa.375320	CSPI03G21350	Wild cucumber (PI 183967)	cgycpiB554
Cucsa.375320	CmaCh01G003680	Cucurbita maxima (Rimu)	cgycmaB1035
Cucsa.375320	CmoCh01G003860	Cucurbita moschata (Rifu)	cgycmoB1034
Cucsa.375320	Lsi05G003380	Bottle gourd (USVL1VR-Ls)	cgylsiB607
Cucsa.375320	Cp4.1LG02g16910	Cucurbita pepo (Zucchini)	cgycpeB0989
Cucsa.375320	MELO3C020249.2	Melon (DHL92) v3.6.1	cgymedB606
Cucsa.375320	CsaV3_3G021130	Cucumber (Chinese Long) v3	cgycucB569
Cucsa.375320	Cla97C05G093440	Watermelon (97103) v2	cgywmbB644
Cucsa.375320	Bhi01G001507	Wax gourd	cgywgoB750
Cucsa.375320	Carg07456	Silver-seed gourd	carcgyB0866

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.375320	Cucurbita maxima (Rimu)	cgycmaB1034
Cucsa.375320	Cucurbita moschata (Rifu)	cgycmoB1033
Cucsa.375320	Cucurbita pepo (Zucchini)	cgycpeB0990
Cucsa.375320	Silver-seed gourd	carcgyB0586