MELO3C020249 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020249
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionnijmegen breakage syndrome 1
Locationchr6 : 14613616 .. 14615776 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAGATGTTATTACAACAAGTTGGTGGTGCGAATGTTTTGTCAATCGAGGACTTCTCTTCTGATAGCCAAGTATGAGGCTCCACCTCTTTTTCACCTATACTGGATCCATCTTTTCCTAATTTCTTCTGAAAGCGTGGTTAAACACTTTTATTTGACAATTTCATGTAAAGACAATCTAATTTACATTATTTCTAATAGCAATGTGGGAAATTTTCTAGTACCACGGAAGTACTATACTCACTCCCTTTGTTCAGACTATAAATTTACCTTCATAAAGCATCAACATATACATAATATTTTTACTCATGAAATAATAATTGCGTTCCAAACGGTAATGCTTCAGTTGTTAACAGTGGTTGGAACATGTTCCAAATGGTGCTCTATGTATTCTGTGATTAGAAAAAATATAATGGCTTGAAGTCTTTATTCTATTTCTTTTGTTTATCTCAGTTCTGCAAACCTGGTGTTTGTTGGGCATTGATTTGCATGATAACTTTTGTAGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTGGGATTCATCCTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGGTAAGCAGTCTTCTTTGCTACTAGTTTCTCTAGTTTACTAGTGATAATTGATAAGTTACGATGATTTTTCGATTTTAACTTCATTCATCTGAATGTAGAGTTTTCTTGCAGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATATCTAAGCAAATCAGATGAATATTTAAGTAGATCACTGGTGTCTGTTGACAATGCTACTACTGGATCATTGGGTGGCCATGAAATAGTAAAAAATAGTAGCAGTGACATCGAGATGAGAAAAGACAAGATCAATGAATCCGACAACAGAAACATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGACGAAAGCCTCCACTTTAGTAACTGCAGAAAACAGTGGGATTACAAACTTCAAACGATTCAGAAAAGTATTGCTCTTTGCCTTTGAATGTCTTTTCCTGCATCATTCCATTTTAAATGGTGTGCAAATTACTGCTTCATGTTGATGAGATTCAGCCATATCCTCTTATTATGTCGTAAGATCATTACCGATGCGCGTTAATCAACCATTACTTTTGCCTCAAATATGCTTAGCAATGAAAACTTTCTTGTGTCGGTTGGCATATGGCGAAAAATATTATGGAAGATGGCACACATCACTCATGTCCTTTCAACATTTTTGCAGACACAAACTCACTCTGGGAATAGCTTTAGCAATCTTGTCCCATTTGATAAGTATCCTTACAAGTAAGTGTTTCTCTTGCTTTCTTTCTTTCTTTCCCCCTTTGAAGTGTTTTAAGATGTCATTAGATTTATTGCCTTTTTGTGGCTTTTTTTGGTCAAGCTTGATTATTTTGGATAAGGTCCCGTTTTCTTTGATGGAATCTTCAAACATTTTTTTATGACTTTGTAGGGATAATGGTGATGGGAGGGAGGAAATTGCTGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCAGAAGATTTATTTCATAATGAGAAGGTGAGTATTTTTTAACTTATTTTAGCATCATAGGTTAATAGGCAAAGCATGGCTTGGGACATACATTTTTAACTTGATCAAATTTCAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTTTCATCAAAGAATGCTCTCTCTCTCAAGACGTTCGTGATGGTCTCATGTCAATGCAAAATAGTTTAGTCTTTTCTTGGTCTGTATTTTGGCAGTCATACACAAAGAGTACATTATTTGCAGGAAGAATGCTATCGGCCAAATTTGGGATGTCGATATATTAATTCTTCTTTTCCACATTGCCTTTAGTTTTGTAAGTATATAAATATATATATTTAATCTTTACTTCGGAGGTGATGTATGTCTAAGGACATTATTAAC

mRNA sequence

TGAAGATGTTATTACAACAAGTTGGTGGTGCGAATGTTTTGTCAATCGAGGACTTCTCTTCTGATAGCCAAGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTGGGATTCATCCTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATATCTAAGCAAATCAGATGAATATTTAAGTAGATCACTGGTGTCTGTTGACAATGCTACTACTGGATCATTGGGTGGCCATGAAATAGTAAAAAATAGTAGCAGTGACATCGAGATGAGAAAAGACAAGATCAATGAATCCGACAACAGAAACATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGACGAAAGCCTCCACTTTAGTAACTGCAGAAAACAGTGGGATTACAAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAGCAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCTGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCAGAAGATTTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTTTCATCAAAGAATGCTCTCTCTCTCAAGACGTTCGTGATGGTCTCATGTCAATGCAAAATAGTTTAGTCTTTTCTTGGTCTGTATTTTGGCAGTCATACACAAAGAGTACATTATTTGCAGGAAGAATGCTATCGGCCAAATTTGGGATGTCGATATATTAATTCTTCTTTTCCACATTGCCTTTAGTTTTGTAAGTATATAAATATATATATTTAATCTTTACTTCGGAGGTGATGTATGTCTAAGGACATTATTAAC

Coding sequence (CDS)

ATGTTATTACAACAAGTTGGTGGTGCGAATGTTTTGTCAATCGAGGACTTCTCTTCTGATAGCCAAGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTGGGATTCATCCTCTAAGGTTGATTCTTATTATAAAATAACCGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGATGAGACCGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGTTGTTTCTAATGTCCAAGGGCCAGATGAATATCTAAGCAAATCAGATGAATATTTAAGTAGATCACTGGTGTCTGTTGACAATGCTACTACTGGATCATTGGGTGGCCATGAAATAGTAAAAAATAGTAGCAGTGACATCGAGATGAGAAAAGACAAGATCAATGAATCCGACAACAGAAACATAGACATTATATTCAGTCAAAATTTAATTGTGCAGCATGCGACGAAAGCCTCCACTTTAGTAACTGCAGAAAACAGTGGGATTACAAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAGCAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCTGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCAGAAGATTTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAA

Protein sequence

MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS*
Homology
[Close]
BLAST of MELO3C020249 vs. Swiss-Prot
Match: NBS1_ARATH (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-40
Identity = 103/293 (35.15%), Postives = 160/293 (54.61%), Query Frame = 1 

Query: 3   LQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILI 62
           L +V GA  ++IED SS SQD   GE +R++ V+P  + +K+     +    ++ E+ L+
Sbjct: 257 LLEVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLV 316

Query: 63  SSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPD-------- 122
            +V SG L   +LI P    SS+CSTDETVVA+S+ E E +   V  +   +        
Sbjct: 317 CAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKP 376

Query: 123 -------------EYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINE 182
                        E  S  +E+ S +L++   +      GH   KNSS  + +R+D+ +E
Sbjct: 377 AAIVIEDSPVTILEETSNLNEFKSVNLLADTESR-----GHMDEKNSSDSVTIRRDRNDE 436

Query: 183 SDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYP 242
           ++    +II++Q+LIV+       + +    G+ +FKRFRK     GNSFS+L+PF K P
Sbjct: 437 AETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDP 496

Query: 243 YKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           YK+      ++ + +KEE++RK+ EAIAEDLF  EK R+RG AGS++   + S
Sbjct: 497 YKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

[Close]
BLAST of MELO3C020249 vs. Swiss-Prot
Match: NBS1_ORYSJ (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16
Identity = 43/111 (38.74%), Postives = 72/111 (64.86%), Query Frame = 1 

Query: 156 KDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLV 215
           KD+  +S +    +I++QNL+V+   + S    +  +G  NFKRFRK    SGNSF +L+
Sbjct: 441 KDETLDSRDETCHVIYTQNLVVKSILQ-SARAESIETGGINFKRFRKRGAVSGNSFKDLI 500

Query: 216 PFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGS 267
           P+ + PY+++   R  + + ++EE++R++ EAIAEDLF+N K +++  AGS
Sbjct: 501 PYSREPYRESDYERGTVTDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550


HSP 2 Score: 66.2 bits (160), Expect = 6.2e-10
Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = 1 

Query: 8   GANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLS 67
           GA  L +++F ++SQD G GEND+ + ++P  S  ++     +    KIT++ L +++LS
Sbjct: 257 GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKIRGLFPLSKITDVKLFAAILS 316

Query: 68  GTLDRDNLIHPCEPGSSTCSTDETVVAESDLE--TETSKPVVSNVQGPDEYLSKSDEYLS 127
           G L+   +  P    +S+ STDET+V +SD+E  T TS   V+  +        SD+   
Sbjct: 317 GHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDHTVAASKSEHHIEHISDD--K 376

Query: 128 RSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDII 171
           + +V++      +L   +   N  SD E  KD+I +    ++ +I
Sbjct: 377 KEVVAISEEDAVNLVEAKTSINLHSDQE--KDEIVKPMEEDVKVI 417

[Close]
BLAST of MELO3C020249 vs. Swiss-Prot
Match: NBS1_ORYSI (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-16
Identity = 43/111 (38.74%), Postives = 72/111 (64.86%), Query Frame = 1 

Query: 156 KDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLV 215
           KD+  +S +    +I++QNL+V+   + S    +  +G  NFKRFRK    SGNSF +L+
Sbjct: 441 KDETLDSRDETCHVIYTQNLVVKSILQ-SARAESIETGGINFKRFRKRGAVSGNSFKDLI 500

Query: 216 PFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGS 267
           P+ + PY+++   R  + + ++EE++R++ EAIAEDLF+N K +++  AGS
Sbjct: 501 PYSREPYRESDYKRGTVIDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550


HSP 2 Score: 67.4 bits (163), Expect = 2.8e-10
Identity = 35/96 (36.46%), Postives = 59/96 (61.46%), Query Frame = 1 

Query: 8   GANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLS 67
           GA  L +++F ++SQD G GEND+ + ++P  S  ++   S +    KIT++ L +++LS
Sbjct: 257 GAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKISGLFPLSKITDVKLFAAILS 316

Query: 68  GTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETS 104
           G L+   +  P    +S+ STDET+V +SD+E +T+
Sbjct: 317 GHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTA 352

[Close]
BLAST of MELO3C020249 vs. TrEMBL
Match: A0A0A0LA01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 4.5e-140
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELI
Sbjct: 236 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELI 295

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKS
Sbjct: 296 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKS 355

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSR L+SVDNA TGS+GGHE VKNS SDIEMRKDKINESD+RNIDIIFSQNLIVQHA
Sbjct: 356 DEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHA 415

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TK STLVTAEN+GI NFKRFRKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 416 TKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEER 475

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 476 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 508

[Close]
BLAST of MELO3C020249 vs. TrEMBL
Match: A0A067K4W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.1e-52
Identity = 120/273 (43.96%), Postives = 177/273 (64.84%), Query Frame = 1 

Query: 3   LQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILI 62
           L ++GGA V+ IE+F S SQ L  GEN R+V V+P GS +K+   SK+ S  ++ E+ ++
Sbjct: 250 LLELGGAKVIFIEEFCSSSQGLDYGENLRMVCVIPQGSTDKFGHFSKLSSLSRVNEVDVL 309

Query: 63  SSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDE 122
            +V+SG LD   LI P    SS+CSTDETVVA+SD E ET+  V +      E   K   
Sbjct: 310 CAVVSGYLDSSMLILPTVLVSSSCSTDETVVADSDEEVETTS-VHATANICKEEAPKCGN 369

Query: 123 YLSRSLVSVDNATTGSLGGHEIVKNSSSDIEM--RKDKINESDNRNIDIIFSQNLIVQHA 182
            +    +S        LG   +   + +  EM  +++K++E ++ N DII+SQ+LIV+  
Sbjct: 370 KVE---ISTFQHPPIKLGDTHVASTTGNHGEMLGKREKVDEPESTNSDIIYSQDLIVRDW 429

Query: 183 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 242
              +T  +  N G+ NFKRF+K  T SGNSF++L+PF K+PYKD+  G +E+ +S+KEER
Sbjct: 430 HVPATTRSTTNDGVLNFKRFKKKNTQSGNSFNSLIPFSKHPYKDSDYGNQEMVDSVKEER 489

Query: 243 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTR 274
           +RK+ EA+AEDLF+NEKGRRRG+AGS++ + +R
Sbjct: 490 KRKQMEAVAEDLFNNEKGRRRGVAGSIRSILSR 518

[Close]
BLAST of MELO3C020249 vs. TrEMBL
Match: B9IDC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 3.9e-51
Identity = 116/275 (42.18%), Postives = 181/275 (65.82%), Query Frame = 1 

Query: 3   LQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILI 62
           L +V GA ++ +E+F S+++ L  G++  VV V+P GS +K++  +K+ S  ++ EL L+
Sbjct: 249 LLEVCGAKIVLVEEFCSNAKGLDCGQDSHVVCVIPRGSPDKFNLFNKLGSLSRVNELDLL 308

Query: 63  SSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESD--LETETSKPVVSNV--QGPDEYLS 122
            +VL+G LD   L+ P    SS+CSTDETVVA+S+  +ET TS+   +++  +G  +Y++
Sbjct: 309 RAVLAGHLDLSVLVSPSVLVSSSCSTDETVVADSEAEVETPTSEHFTADISNEGAPKYVN 368

Query: 123 KSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQ 182
           K +  +   L S +N    S         S   +  +++ ++E+++ N DII+SQ+LI++
Sbjct: 369 KLEMSIDPHLRSENNHVVSST-------YSIGKMTAKRETVDEAESGNSDIIYSQDLIIR 428

Query: 183 HATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKE 242
                + + +  N+ + NFKRFRK  T SGNSF+NL+PF KYPYKD   G +++ ES+KE
Sbjct: 429 DLNLPAQISSTPNNEVLNFKRFRKGNTQSGNSFNNLIPFSKYPYKDFDYGNQDMLESVKE 488

Query: 243 ERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTR 274
           E+RRK+ EAIAEDLF+ EKGRRRG+AGSL  L TR
Sbjct: 489 EKRRKQMEAIAEDLFNTEKGRRRGVAGSLHVLLTR 516

[Close]
BLAST of MELO3C020249 vs. TrEMBL
Match: B9SIQ5_RICCO (Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 121/275 (44.00%), Postives = 182/275 (66.18%), Query Frame = 1 

Query: 5   QVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISS 64
           +VGGAN++ IE+F S ++ L   EN R+V V+P GS +K+   SK+ S  ++ E+ L+ +
Sbjct: 255 EVGGANIVFIEEFYSSNEGLDYKENFRMVCVIPQGSADKFGRFSKLSSLSRVNEVDLLYA 314

Query: 65  VLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETET-SKPVVSNV-QGPDEYLSKSDE 124
           V+SG LD   LI P    SS+CSTDETVVA+SD E ET S    +N+     ++++K + 
Sbjct: 315 VVSGHLDLSKLILPTVVVSSSCSTDETVVADSDEEVETMSTHATANICSEAPKFVNKVET 374

Query: 125 YLSRSLVS---VDNATTGSLGGHEIVKNSSSDIEM--RKDKINESDNRNIDIIFSQNLIV 184
              ++ V    VDN  T  L    +V++  ++I M  +++K++E ++ N DII+SQNLI+
Sbjct: 375 SPIQAKVETSPVDNPCT-KLEDRHVVRSMGNNIGMTAKREKVDEPESANSDIIYSQNLII 434

Query: 185 QHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLK 244
           +   +    +++ N    +FKRF+K QT SGNSF+NL+PF KY YKD+  G +E+  S+K
Sbjct: 435 RD-WQLPVRISSTNERFIDFKRFKKKQTQSGNSFNNLIPFSKYSYKDSDPGNQEMLHSMK 494

Query: 245 EERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFT 273
           EER+RK+ EAIAEDLF++EKGRRRG AGS+  L +
Sbjct: 495 EERKRKQMEAIAEDLFNSEKGRRRGGAGSICSLLS 527

[Close]
BLAST of MELO3C020249 vs. TrEMBL
Match: A0A0R0L0E9_SOYBN (Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_02G239200 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 4.3e-50
Identity = 121/301 (40.20%), Postives = 177/301 (58.80%), Query Frame = 1 

Query: 3   LQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILI 62
           L +V GA V+S EDF SDSQ    GE++RVV V+PGG   K +  +K+ S  ++TE+ +I
Sbjct: 221 LLEVAGAKVVSSEDFCSDSQGTDYGEDNRVVCVIPGGPACKSNLFNKLSSLLRVTEMDVI 280

Query: 63  SSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNV------------ 122
            +  SG LD   L  PC   SS+CSTDET+VA+SD E ET+ P  SN             
Sbjct: 281 CAAFSGQLDLSILKSPCLLVSSSCSTDETIVADSDTEVETATPAPSNDAFSNGNNVKYGK 340

Query: 123 ------------QGPDEYLSKSDEYLSRSLVSVDNATTG-SLGGHEI------VKNSSSD 182
                       +   E +  S + +S  L  + +A T  SL G          +N++  
Sbjct: 341 TEELYDDSDPLDKRKHERIEASSDDVSTRLHDIKHAKTETSLDGASARSHSTSFRNANDG 400

Query: 183 IEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSF 242
           I+++K  +++ ++ N D+++SQ L+V+     + + TA NS + NFK FRK QT SGNSF
Sbjct: 401 IKIKKGMVDDYESGNSDMVYSQYLVVRDTNICTIISTAPNSSVPNFKHFRKAQTQSGNSF 460

Query: 243 SNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELF 273
            NLVPF KYPYKD+  G E++ E +K+E+R+K+ EA+A+D+FHNE  R+RG  GSL+ + 
Sbjct: 461 DNLVPFGKYPYKDSDCGNEDVTELVKKEKRQKKMEAMADDMFHNE-ARKRGTVGSLRGIL 520

[Close]
BLAST of MELO3C020249 vs. TAIR10
Match: AT3G02680.1 (AT3G02680.1 nijmegen breakage syndrome 1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-41
Identity = 103/293 (35.15%), Postives = 160/293 (54.61%), Query Frame = 1 

Query: 3   LQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILI 62
           L +V GA  ++IED SS SQD   GE +R++ V+P  + +K+     +    ++ E+ L+
Sbjct: 257 LLEVCGAETVTIEDISSMSQDSQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLV 316

Query: 63  SSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPD-------- 122
            +V SG L   +LI P    SS+CSTDETVVA+S+ E E +   V  +   +        
Sbjct: 317 CAVFSGNLPSTSLIPPSVVISSSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKP 376

Query: 123 -------------EYLSKSDEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINE 182
                        E  S  +E+ S +L++   +      GH   KNSS  + +R+D+ +E
Sbjct: 377 AAIVIEDSPVTILEETSNLNEFKSVNLLADTESR-----GHMDEKNSSDSVTIRRDRNDE 436

Query: 183 SDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYP 242
           ++    +II++Q+LIV+       + +    G+ +FKRFRK     GNSFS+L+PF K P
Sbjct: 437 AETGKSEIIYTQDLIVRDLRSTRKVQSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDP 496

Query: 243 YKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           YK+      ++ + +KEE++RK+ EAIAEDLF  EK R+RG AGS++   + S
Sbjct: 497 YKEYDSW--DVTDFMKEEKKRKQMEAIAEDLFKTEKARKRGTAGSIRGFLSGS 542

[Close]
BLAST of MELO3C020249 vs. NCBI nr
Match: gi|659114410|ref|XP_008457039.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X3 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI
Sbjct: 199 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 258

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS
Sbjct: 259 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 318

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA
Sbjct: 319 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 378

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 379 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 438

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 439 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 472

[Close]
BLAST of MELO3C020249 vs. NCBI nr
Match: gi|659114408|ref|XP_008457038.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X2 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI
Sbjct: 251 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 310

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS
Sbjct: 311 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 370

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA
Sbjct: 371 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 430

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 431 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 490

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 491 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 524

[Close]
BLAST of MELO3C020249 vs. NCBI nr
Match: gi|659114406|ref|XP_008457036.1| (PREDICTED: nibrin isoform X1 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI
Sbjct: 252 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 311

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS
Sbjct: 312 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 371

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA
Sbjct: 372 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 431

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 432 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 491

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 492 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 525

[Close]
BLAST of MELO3C020249 vs. NCBI nr
Match: gi|659114412|ref|XP_008457040.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo])

HSP 1 Score: 539.7 bits (1389), Expect = 3.1e-150
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI
Sbjct: 150 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 209

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS
Sbjct: 210 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 269

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA
Sbjct: 270 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 329

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 330 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 389

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 390 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 423

[Close]
BLAST of MELO3C020249 vs. NCBI nr
Match: gi|449456249|ref|XP_004145862.1| (PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus])

HSP 1 Score: 505.4 bits (1300), Expect = 6.4e-140
Identity = 258/274 (94.16%), Postives = 264/274 (96.35%), Query Frame = 1 

Query: 1   MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELI 60
           MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELI
Sbjct: 251 MLLQQVGGANVLSIEDFSSDSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELI 310

Query: 61  LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKS 120
           LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKS
Sbjct: 311 LISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKS 370

Query: 121 DEYLSRSLVSVDNATTGSLGGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHA 180
           DEYLSR L+SVDNA TGS+GGHE VKNS SDIEMRKDKINESD+RNIDIIFSQNLIVQHA
Sbjct: 371 DEYLSRPLISVDNAATGSVGGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHA 430

Query: 181 TKASTLVTAENSGITNFKRFRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEER 240
           TK STLVTAEN+GI NFKRFRKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEER
Sbjct: 431 TKPSTLVTAENNGI-NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEER 490

Query: 241 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 275
           RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS
Sbjct: 491 RRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS 523

The following BLAST results are available for this feature:
BLAST of MELO3C020249 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NBS1_ARATH3.4e-4035.15Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1[more]
NBS1_ORYSJ1.2e-1638.74Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=... [more]
NBS1_ORYSI1.5e-1638.74Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 ... [more]
BLAST of MELO3C020249 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA01_CUCSA4.5e-14094.16Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1[more]
A0A067K4W4_JATCU2.1e-5243.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1[more]
B9IDC7_POPTR3.9e-5142.18Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2[more]
B9SIQ5_RICCO1.1e-5044.00Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1[more]
A0A0R0L0E9_SOYBN4.3e-5040.20Uncharacterized protein (Fragment) OS=Glycine max GN=GLYMA_02G239200 PE=4 SV=1[more]
BLAST of MELO3C020249 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G02680.11.9e-4135.15 nijmegen breakage syndrome 1[more]
BLAST of MELO3C020249 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114410|ref|XP_008457039.1|3.1e-150100.00PREDICTED: uncharacterized protein LOC103496815 isoform X3 [Cucumis melo][more]
gi|659114408|ref|XP_008457038.1|3.1e-150100.00PREDICTED: uncharacterized protein LOC103496815 isoform X2 [Cucumis melo][more]
gi|659114406|ref|XP_008457036.1|3.1e-150100.00PREDICTED: nibrin isoform X1 [Cucumis melo][more]
gi|659114412|ref|XP_008457040.1|3.1e-150100.00PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo][more]
gi|449456249|ref|XP_004145862.1|6.4e-14094.16PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048856 anatomical structure development
biological_process GO:0022402 cell cycle process
biological_process GO:0009987 cellular process
biological_process GO:0008152 metabolic process
biological_process GO:0032501 multicellular organismal process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0050896 response to stimulus
biological_process GO:0044767 single-organism developmental process
biological_process GO:0065007 biological regulation
biological_process GO:0071479 cellular response to ionizing radiation
biological_process GO:0044702 single organism reproductive process
biological_process GO:0032508 DNA duplex unwinding
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0007095 mitotic G2 DNA damage checkpoint
biological_process GO:0006312 mitotic recombination
biological_process GO:0007131 reciprocal meiotic recombination
biological_process GO:0042770 signal transduction in response to DNA damage
biological_process GO:0016233 telomere capping
biological_process GO:0006464 cellular protein modification process
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0019219 regulation of nucleobase-containing compound metabolic process
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0051276 chromosome organization
biological_process GO:0007059 chromosome segregation
biological_process GO:0006310 DNA recombination
biological_process GO:0007126 meiotic nuclear division
biological_process GO:0007275 multicellular organism development
biological_process GO:0033043 regulation of organelle organization
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0044710 single-organism metabolic process
biological_process GO:0009653 anatomical structure morphogenesis
biological_process GO:0003006 developmental process involved in reproduction
biological_process GO:0007127 meiosis I
biological_process GO:0009791 post-embryonic development
biological_process GO:0070647 protein modification by small protein conjugation or removal
cellular_component GO:0005575 cellular_component
cellular_component GO:0030870 Mre11 complex
cellular_component GO:0000784 nuclear chromosome, telomeric region
molecular_function GO:0003674 molecular_function
molecular_function GO:0004003 ATP-dependent DNA helicase activity
molecular_function GO:0003684 damaged DNA binding
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59900melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020249T1MELO3C020249T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59900MU59900transcribed_cluster