Cucsa.375320.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.375320.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Nijmegen breakage syndrome 1, putative isoform 1
Location	scaffold03746 : 283562 .. 287661 (-)
Sequence length	1238

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCTCATTACATAGTTGAAAGTCCCTTCGTGGACTTGATTTTTATATGTTCTTGTATTCTTTTATTTCTTTGTTAATGAAAACAGTTGTTTCTATCCTTGAAGAAAACTCCTTGTTCTTCACTCTTTTCTATCTGTGCACTGACCATTGCCAAGCATTTTTAGTATCTGCACCTGCATCGATCCTCATTATTTGTCCTGAATTTGTTGAAGAAGATGTTTCTGATGCTTTCTATTTCTAGACTCATGCTATCAATAAAAACACGAGAGAAGTGAGATTCTGCTTTCTTTCTGATTGTTACACTTCAGTTATTTTCAGGAAAAACCACCTGCAATGAGATTCCATCCTTTGATTCGTGAGTGCTGCCTTTTAAGTTCAGTTGGGAACAAATTATTATGAAGTAATAGTAAATATTTTTTGAACTCCTGCATTTCACTCGCTTTTGTCTTTGTTCTTTGAATCAGCTATCAACCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGTAATGCTATATGTTTCAATTTCAGTCTGTCTTTTCATTTTCACATTTTCTGAGAGTTGCTGGACAATCCTCTAATGAATGAATTATAAAATAAATTAGCTTTATTTATAATTCATTCATCTTCCATTGTTTATGGCAAGTCTCACTGTTTTTGAGCGTTTTGCACACTTGAAGGCGTCTACTTATTCAACATATCTGCCTTAACCAGAATGCCTTTATCTCTCATGGAACTTAAGTCTTATCCAAGATACTTGGACGCAAGTGGTGTTTAGTACTATTCCTTAGGTTTCTGTCTGCTTATTTTTGGAACTTAAGAAATAAATGTGAGGCTACTGGTTGGGGATACAGGATATTGTGGAAATGGTAGTTGGTTATTGGTAAGGGACTAAGGGTATGGTGGTTATTAGTTAGGGAGGTGTTGTAGAGTTTAGGATATAAATAGAGAGTGGGGGAAATTTGGGTTGGGAGAGGTCTCAAGAGAGAGGGTGGGAGGGGGTGGAAGTGCCTCGAATTACTTGTTTATCTCTTAGGTGGGAGAGAGAAAAAAAAGTAATTTCTTTCATTCCAGATTGATGCAATTATTGTATAATAGAGGAGGCAACATATATATAGATTACAAGGGTAATTAAATCTTAACCACCTAACTCCGGACATTCTCTTATAATATATGTTTGCTCGTAAACCATATAATCTAAACAATTCCAACAACTTCAAACTAAAACTAATTCAATAGTAGCGATGCAAGAAAGTTGTTTTCTGTCATGTTGGGTCTGGACAGTTATTAGAAGTTGTATGTTTGTGTTTGGTATCCAGATTAGGATTTAAGTGAAGTAGCTAGCTACCTACCTATGAGAAAACCATCTTATGCTTTGTTTTGTGTGGGGGGAGTTCAAACCTCTCTAATATATGGGTTGCATGGAACTTTCCTGAATGTTTGTGAATAATCTCTAAAGTCTCAACTAGGCAGTCTTTATCTCTCAACCAGCACCCTAGGCCCTGTTCTGTTTTGGTGACATTGTTTTGCATTTTGACAGCTTCGTTTTCCCCTCTCTGGCCAGCCTTCTTTGGAGCATAACTTATATTTTCTTTGGGTCTAGTTTACACAGTAGCAGCTTTTGCTTTTGTTTACAGGTTCAGCCTTTGTACTGCTTTGTTTGCCTCATTTCCTTTTCTTTATTTTTCTTTATTTCTCTGTCTCAGCTTCTGTATTAGGCTGGATTATGTCTCCATTGTACTTTGGCATTTTTTATTTCTAGCTTTAATTGGGATTGTTTTGATGCTAAGAGGTGTCAACCTAGTTGAGATGTCTGGATGCACCTTCTGATCCCCCGCTTATTGCTTTCTAGGCTTCTTTATTACGCTCATTGTATAACTCTCTTGTACTTTGAGTTATTGTTAATAAAGTAGTTTGTCTCCGTTTCAAAAAAATCTCTGAAGTTGAGTTCTTATTAAAAAAGAATCTTTTGTCTCCGTTTCAAAAAAAAAAAAACTGAAATCTGAATTTTCTGTTTCGTATTTCTAGTTTTTGACATTCATTTTTCTAAAATTTAGCAGTACAAGTATGGGGATCGGTTGAAGATGTTATTACAACAAGTTGGTGGTGCGAATGTTTTGTCTATTGAGGACTTCTCTTCAGATAGCCAAGTATGAGGCTCTACCTCTTCTCACCTATACTGTATCCATCTTTTCCTAATTTCTTCTGAAGGCGTGGATAAACACTTTTATTTGACAATTTCATGTAAAATAATCTAAGTCACATTATTTCTAATAGCAATGTGGGAATTTTTCTAGTACTACGGAAGTACTCTACTCCCTTTGTTCACTCTATAAATTGGTCTTCATAAAACATCAACATATGCATAACATTTTTACTCATGAATTAGTAATTGTGTTCCAAACGGTAATGCTTCAGTTGTTAACAGTGTTTGGAAATATGTTCCAAATGGTGCTCTATGTAGTCTGTGATTAGAAAAAATATAACGGGTTGAAGTCTTTATTCCATTTCTTTTGTTTATCTCAATTCTGTGAACTTGGTGTTTGTTGGGCATTGATTTGCATGATAACTTTTGTAGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGGTAAGCAGTCTTCTTCACTGCTACTTTCTCTAGTAGTATATTTTTCTAGTGATAATTGATAAGTTACGGTTGATTTCTCGATTTTAACTTCATTTGTCTAGCTGAATGTAGAGTTTCCTTGCAGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAGTATTGCTCTTTGCCTTTGAACGTCTTTTCCTGCATCATTCCATTTTAAATGGTGTGCAAATTATTGCTTCATGTTGATGAGATCTCAGCCATTATATATTTTTGCTCATCTTGAATGATGATCGTGATCATGTTGGCATTCAACTGTCAGTATGTTGGTTTAGGAATCAGTGGAAACAGATACTTTTGCCTCAAATATGCTTAGCAATGAAAACTTTCTTGTGTCGGTTGGCATATGGAGGAAAATATTATGGAAGTTGGTACTCATCACTCATGTCCTTAAAACTTTTTTGCAGACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGTAAGTGTTTCTCTTGCTCTCTTTCTTTCTTTCTTTCCCCCTTTGAAGTGTTTTAAGATGTCACTAGATTTATTGCCTTTTTGTGGCTTTTTTTGGCCAAGCTTGATTGTTTTGGATTGAGGTCCCCTTTTCTTTGATGGTATCATCTAACATTTTCTTATGACTTTGTAGGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGTGAGTCTTTTCTAACTTTAGCATCATAAGTTAATAGACAAGGAATACTTTAGGCTTGGGACATAAGTTTTTAACTTGATCAAATTTCAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTT

mRNA sequence

tagctcattacatagttgaaagtcccttcgtggacttgatttttatatgttcttgtattcttttatttctttgttaatgaaaacagttgtttctatCCTTGAAGAAAACTCCTTGTTCTTCACTCTTTTCTATCTGTGCACTGACCATTGCCAAGCATTTTTAGTATCTGCACCTGCATCGATCCTCATTATTTGTCCTGAATTTGTTGAAGAAGATGTTTCTGATGCTTTCTATTTCTAGACTCATGCTATCAATAAAAACACGAGAGAAGTGAGATTCTGCTTTCTTTCTGATTGTTACACTTCAGTTATTTTCAGGAAAAACCACCTGCAATGAGATTCCATCCTTTGATTCCTATCAACCAACAATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAAAAGCAAATATTTAGGTTT

Coding sequence (CDS)

ATGACTGTGGAAGGGATGCATGTCAAAGTTGTTGACCCAAACACTCGAAAAAACTGTTTGAGTGGATACACTTTTTTACTAGGCAACGCACAGTCGGATTTGGGTAATGGAGAAAATGATCGTGTAGTATTCGTTATGCCTGGAGGATCAGTTGAAAAGTTGGATTCATCCTTTAAGGTTGATTCGTATTATAAAATAACTGAGTTGATTTTGATATCTTCTGTTTTGAGTGGAACACTAGACAGAGACAATTTGATACATCCCTGTGAACCTGGTTCCTCTACATGCTCCACTGACGAGACTGTGGTAGCAGAATCCGATCTTGAAACAGAAACAAGTAAACCAGCTGTTTCTAATGTCCAAGGGCCAGATGCATATGTAAGCAAATCAGATGAATATTTAAGTAGACCACTGATTTCTGTTGACAATGCTACTACTGGATCAGTGGGTGGCCATGAAACAGTAAAAAATAGTTGCAGTGATATCGAGATGAGAAAGGACAAGATCGATGAATCCGACAGCAGAAATATAGACATAATATTCAGCCAAAATTTAATTGTGCAGCATGCCACGAAACCCTCCACTTTAGTAACTGCAGAAAACAATGGGATTAACTTCAAACGATTCAGAAAAACACAAACTCACTCTGGGAATAGCTTTAACAATCTTGTCCCATTTGATAAGTATCCTTACAAGGATAATGGTGATGGGAGGGAGGAAATTGCAGAGTCCTTGAAAGAAGAAAGAAGGCGGAAGGAAACAGAAGCTATAGCCGAAGATCTATTTCATAATGAGAAGGGACGGCGACGTGGAATGGCGGGTTCTCTTCAAGAGCTTTTTACTCGTTCTTAA

Protein sequence

MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGSLQELFTRS*

Homology

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BLAST of Cucsa.375320.2 vs. Swiss-Prot
Match: NBS1_ARATH (Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.0e-35
Identity = 103/328 (31.40%), Postives = 163/328 (49.70%), Query Frame = 1


Query: 3   VEGMHVKVVDPNTRKNCLSGYTFLL-----------------------------GNAQSD 62
           VE   V V++ N R+ CL G+TF+L                              +   D
Sbjct: 218 VEEALVDVLELNVREKCLEGFTFVLEPTDTYRFGCSFPSLLEVCGAETVTIEDISSMSQD 277

Query: 63  LGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGS 122
              GE +R++ V+P  + +K      +    ++ E+ L+ +V SG L   +LI P    S
Sbjct: 278 SQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVIS 337

Query: 123 STCSTDETVVAESDLETETS-----------------KPAVSNVQGPDAYVSKSDEYLSR 182
           S+CSTDETVVA+S+ E E +                 KPA   ++     + +    L+ 
Sbjct: 338 SSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNE 397

Query: 183 PLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTL 242
              SV+        GH   KNS   + +R+D+ DE+++   +II++Q+LIV+       +
Sbjct: 398 -FKSVNLLADTESRGHMDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKV 457

Query: 243 VTAENNG-INFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETE 284
            +    G ++FKRFRK     GNSF++L+PF K PYK+      ++ + +KEE++RK+ E
Sbjct: 458 QSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQME 517

[Close]

BLAST of Cucsa.375320.2 vs. Swiss-Prot
Match: NBS1_ORYSJ (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.5e-30
Identity = 93/340 (27.35%), Postives = 167/340 (49.12%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           +T++GM ++VV+    ++CL+GYTF+LG+++                             
Sbjct: 211 LTLDGMEIQVVEIKLIESCLAGYTFILGSSEKYKFGDKLHALLESTGAKYLHVDEFCANS 270

Query: 61  -DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 120
            D G GEND+ + ++P  S  +      +    KIT++ L +++LSG L+   +  P   
Sbjct: 271 QDSGAGENDKDILLVPAKSPLEFSKIRGLFPLSKITDVKLFAAILSGHLEATAIEPPAYI 330

Query: 121 GSSTCSTDETVVAESDLE------------------------------TETSKPAVSNVQ 180
            +S+ STDET+V +SD+E                                + + AV+ V+
Sbjct: 331 VASSNSTDETIVVDSDVEIDTATSDHTVAASKSEHHIEHISDDKKEVVAISEEDAVNLVE 390

Query: 181 GPDAYVSKSDEY---LSRPL---ISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSR 240
              +    SD+    + +P+   + V   T    G     ++     ++ KD+  +S   
Sbjct: 391 AKTSINLHSDQEKDEIVKPMEEDVKVIEKTATMRGFKVEGEDIPVMTKVPKDETLDSRDE 450

Query: 241 NIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVPFDKYPYKDNG 276
              +I++QNL+V+   + +   + E  GINFKRFRK    SGNSF +L+P+ + PY+++ 
Sbjct: 451 TCHVIYTQNLVVKSILQSARAESIETGGINFKRFRKRGAVSGNSFKDLIPYSREPYRESD 510

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BLAST of Cucsa.375320.2 vs. Swiss-Prot
Match: NBS1_ORYSI (Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 7.6e-19
Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 166 KDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFRKTQTHSGNSFNNLVP 225
           KD+  +S      +I++QNL+V+   + +   + E  GINFKRFRK    SGNSF +L+P
Sbjct: 441 KDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGINFKRFRKRGAVSGNSFKDLIP 500

Query: 226 FDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRRGMAGS 276
           + + PY+++   R  + + ++EE++R++ EAIAEDLF+N K +++  AGS
Sbjct: 501 YSREPYRESDYKRGTVIDFMREEKKRRQMEAIAEDLFNNAKPKKKAAAGS 550

HSP 2 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 41/142 (28.87%), Postives = 74/142 (52.11%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           +T++GM ++VV+    ++CL+GYTF+LG+++                             
Sbjct: 211 LTLDGMEIQVVEIKLIESCLAGYTFILGSSEKYKFGDKLHALLESTGAKYLHVDEFCANS 270

Query: 61  -DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 114
            D G GEND+ + ++P  S  +      +    KIT++ L +++LSG L+   +  P   
Sbjct: 271 QDSGAGENDKDILLVPAKSPLEFSKISGLFPLSKITDVKLFAAILSGHLEATAIEPPAYI 330

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BLAST of Cucsa.375320.2 vs. TrEMBL
Match: A0A0A0LA01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1)

HSP 1 Score: 545.8 bits (1405), Expect = 3.1e-152
Identity = 281/313 (89.78%), Postives = 282/313 (90.10%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS                            
Sbjct: 196 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRLKMLLQQVGGANVLSIEDFSSD 255

Query: 61  --DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
             DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE
Sbjct: 256 SQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 315

Query: 121 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVG 180
           PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSVG
Sbjct: 316 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSVG 375

Query: 181 GHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 240
           GHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR
Sbjct: 376 GHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 435

Query: 241 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 284
           KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR
Sbjct: 436 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 495

[Close]

BLAST of Cucsa.375320.2 vs. TrEMBL
Match: A0A067K4W4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.3e-53
Identity = 130/316 (41.14%), Postives = 185/316 (58.54%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGN-----------------------------AQ 60
           +TV+G  VKV D  TR NCL GYTFLL +                             + 
Sbjct: 209 LTVKGAPVKVADSITRANCLKGYTFLLESVNMYKFGDRLRSLLELGGAKVIFIEEFCSSS 268

Query: 61  SDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 120
             L  GEN R+V V+P GS +K     K+ S  ++ E+ ++ +V+SG LD   LI P   
Sbjct: 269 QGLDYGENLRMVCVIPQGSTDKFGHFSKLSSLSRVNEVDVLCAVVSGYLDSSMLILPTVL 328

Query: 121 GSSTCSTDETVVAESDLETE-TSKPAVSNV---QGPDAYVSKSDEYLSRPLISVDNATTG 180
            SS+CSTDETVVA+SD E E TS  A +N+   + P             P I + +    
Sbjct: 329 VSSSCSTDETVVADSDEEVETTSVHATANICKEEAPKCGNKVEISTFQHPPIKLGDTHVA 388

Query: 181 SVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NF 240
           S  G+        ++  +++K+DE +S N DII+SQ+LIV+    P+T  +  N+G+ NF
Sbjct: 389 STTGNH------GEMLGKREKVDEPESTNSDIIYSQDLIVRDWHVPATTRSTTNDGVLNF 448

Query: 241 KRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEK 283
           KRF+K  T SGNSFN+L+PF K+PYKD+  G +E+ +S+KEER+RK+ EA+AEDLF+NEK
Sbjct: 449 KRFKKKNTQSGNSFNSLIPFSKHPYKDSDYGNQEMVDSVKEERKRKQMEAVAEDLFNNEK 508

[Close]

BLAST of Cucsa.375320.2 vs. TrEMBL
Match: B9SIQ5_RICCO (Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.3e-53
Identity = 137/317 (43.22%), Postives = 188/317 (59.31%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGN-----------AQSDLGNG------------ 60
           +TVEG+ VKVVD  TR NCL GYTFLL +           A  ++G              
Sbjct: 212 LTVEGVPVKVVDSVTRANCLKGYTFLLESLNMYKFGDRLQAMLEVGGANIVFIEEFYSSN 271

Query: 61  ------ENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEP 120
                 EN R+V V+P GS +K     K+ S  ++ E+ L+ +V+SG LD   LI P   
Sbjct: 272 EGLDYKENFRMVCVIPQGSADKFGRFSKLSSLSRVNEVDLLYAVVSGHLDLSKLILPTVV 331

Query: 121 GSSTCSTDETVVAESDLETET-SKPAVSNV-QGPDAYVSKSDEYLSRPLIS---VDNATT 180
            SS+CSTDETVVA+SD E ET S  A +N+      +V+K +    +  +    VDN  T
Sbjct: 332 VSSSCSTDETVVADSDEEVETMSTHATANICSEAPKFVNKVETSPIQAKVETSPVDNPCT 391

Query: 181 GSVGGHETVKNSCSDIEM--RKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI 240
                H  V++  ++I M  +++K+DE +S N DII+SQNLI++    P  + +     I
Sbjct: 392 KLEDRH-VVRSMGNNIGMTAKREKVDEPESANSDIIYSQNLIIRDWQLPVRISSTNERFI 451

Query: 241 NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHN 282
           +FKRF+K QT SGNSFNNL+PF KY YKD+  G +E+  S+KEER+RK+ EAIAEDLF++
Sbjct: 452 DFKRFKKKQTQSGNSFNNLIPFSKYSYKDSDPGNQEMLHSMKEERKRKQMEAIAEDLFNS 511

[Close]

BLAST of Cucsa.375320.2 vs. TrEMBL
Match: B9IDC7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 1.1e-51
Identity = 133/318 (41.82%), Postives = 182/318 (57.23%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLL------------------------------GNA 60
           +TVEG+ VKV    TR  CL G+T LL                               NA
Sbjct: 208 LTVEGVSVKVAASGTRAKCLEGFTCLLESINMYKFKDRLQSLLEVCGAKIVLVEEFCSNA 267

Query: 61  QSDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
           +  L  G++  VV V+P GS +K +   K+ S  ++ EL L+ +VL+G LD   L+ P  
Sbjct: 268 KG-LDCGQDSHVVCVIPRGSPDKFNLFNKLGSLSRVNELDLLRAVLAGHLDLSVLVSPSV 327

Query: 121 PGSSTCSTDETVVAESDLETETSKPA-----VSNVQGPDAYVSKSDEYLSRPLISVDNAT 180
             SS+CSTDETVVA+S+ E ET         +SN +G   YV+K +  +   L S +N  
Sbjct: 328 LVSSSCSTDETVVADSEAEVETPTSEHFTADISN-EGAPKYVNKLEMSIDPHLRSENNHV 387

Query: 181 TGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI- 240
             S         S   +  +++ +DE++S N DII+SQ+LI++    P+ + +  NN + 
Sbjct: 388 VSST-------YSIGKMTAKRETVDEAESGNSDIIYSQDLIIRDLNLPAQISSTPNNEVL 447

Query: 241 NFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHN 283
           NFKRFRK  T SGNSFNNL+PF KYPYKD   G +++ ES+KEE+RRK+ EAIAEDLF+ 
Sbjct: 448 NFKRFRKGNTQSGNSFNNLIPFSKYPYKDFDYGNQDMLESVKEEKRRKQMEAIAEDLFNT 507

[Close]

BLAST of Cucsa.375320.2 vs. TrEMBL
Match: M5W7W1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004302mg PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 6.8e-51
Identity = 132/312 (42.31%), Postives = 177/312 (56.73%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLG------------------------------NA 60
           +T EG+ VK+ DP TR+NCL GYTFLL                               N+
Sbjct: 212 LTFEGVSVKLADPRTRENCLEGYTFLLDSKPVYKFMNRLRSLLEVSGAKILTIDGFNLNS 271

Query: 61  QSDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
           QS     ENDRVV V+P  S +  D   K+ S  ++ E  LIS +L+G LD   L  PC 
Sbjct: 272 QSS-DCRENDRVVCVIPEQSSD--DWFNKLGSLLRVNETGLISGILNGRLDPAMLKSPCV 331

Query: 121 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVG 180
             SS+CSTDETVVA+SD E   +    +   G    V           IS + A   S  
Sbjct: 332 VVSSSCSTDETVVADSDTEEIATSVLATASLGTKGVVENVPHE-----ISTNYAAPKSED 391

Query: 181 GHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKRF 240
            +       SDI   + K+DES+S N+DII+SQ+LIV+ A+ P T+ T  N+ + NFKRF
Sbjct: 392 NYVMSCRRSSDISTVRGKLDESESGNVDIIYSQDLIVRDASIPYTVATTANHRVVNFKRF 451

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 282
           RK    SGNSFNN++PF KYPYKD+  G EE+ ES+KEE+RRK+ EA++E+LF+NE   R
Sbjct: 452 RKPNIQSGNSFNNIIPFLKYPYKDSDYGGEEVLESVKEEKRRKQMEAVSEELFNNEGRSR 511

[Close]

BLAST of Cucsa.375320.2 vs. TAIR10
Match: AT3G02680.1 (AT3G02680.1 nijmegen breakage syndrome 1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 103/328 (31.40%), Postives = 163/328 (49.70%), Query Frame = 1


Query: 3   VEGMHVKVVDPNTRKNCLSGYTFLL-----------------------------GNAQSD 62
           VE   V V++ N R+ CL G+TF+L                              +   D
Sbjct: 218 VEEALVDVLELNVREKCLEGFTFVLEPTDTYRFGCSFPSLLEVCGAETVTIEDISSMSQD 277

Query: 63  LGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCEPGS 122
              GE +R++ V+P  + +K      +    ++ E+ L+ +V SG L   +LI P    S
Sbjct: 278 SQFGEINRMICVIPKSAGDKFGRFKHLSLLSRVNEMDLVCAVFSGNLPSTSLIPPSVVIS 337

Query: 123 STCSTDETVVAESDLETETS-----------------KPAVSNVQGPDAYVSKSDEYLSR 182
           S+CSTDETVVA+S+ E E +                 KPA   ++     + +    L+ 
Sbjct: 338 SSCSTDETVVADSEAEEEETTSSVHMIDATEKAETPEKPAAIVIEDSPVTILEETSNLNE 397

Query: 183 PLISVDNATTGSVGGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTL 242
              SV+        GH   KNS   + +R+D+ DE+++   +II++Q+LIV+       +
Sbjct: 398 -FKSVNLLADTESRGHMDEKNSSDSVTIRRDRNDEAETGKSEIIYTQDLIVRDLRSTRKV 457

Query: 243 VTAENNG-INFKRFRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETE 284
            +    G ++FKRFRK     GNSF++L+PF K PYK+      ++ + +KEE++RK+ E
Sbjct: 458 QSTGGEGVVDFKRFRKGNVTCGNSFSSLIPFAKDPYKEYDSW--DVTDFMKEEKKRKQME 517

[Close]

BLAST of Cucsa.375320.2 vs. NCBI nr
Match: gi|449456249|ref|XP_004145862.1| (PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus])

HSP 1 Score: 545.8 bits (1405), Expect = 4.4e-152
Identity = 281/313 (89.78%), Postives = 282/313 (90.10%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS                            
Sbjct: 211 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRLKMLLQQVGGANVLSIEDFSSD 270

Query: 61  --DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
             DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE
Sbjct: 271 SQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 330

Query: 121 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVG 180
           PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSVG
Sbjct: 331 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSVG 390

Query: 181 GHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 240
           GHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR
Sbjct: 391 GHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 450

Query: 241 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 284
           KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR
Sbjct: 451 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 510

[Close]

BLAST of Cucsa.375320.2 vs. NCBI nr
Match: gi|700202671|gb|KGN57804.1| (hypothetical protein Csa_3G308200 [Cucumis sativus])

HSP 1 Score: 545.8 bits (1405), Expect = 4.4e-152
Identity = 281/313 (89.78%), Postives = 282/313 (90.10%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS                            
Sbjct: 196 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSYKYGDRLKMLLQQVGGANVLSIEDFSSD 255

Query: 61  --DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
             DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE
Sbjct: 256 SQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 315

Query: 121 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVG 180
           PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSVG
Sbjct: 316 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSVG 375

Query: 181 GHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 240
           GHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR
Sbjct: 376 GHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRFR 435

Query: 241 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 284
           KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR
Sbjct: 436 KTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRRR 495

[Close]

BLAST of Cucsa.375320.2 vs. NCBI nr
Match: gi|778680802|ref|XP_011651398.1| (PREDICTED: nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 5.8e-152
Identity = 281/314 (89.49%), Postives = 282/314 (89.81%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS---------------------------- 60
           MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQS                            
Sbjct: 211 MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQSQYKYGDRLKMLLQQVGGANVLSIEDFSS 270

Query: 61  ---DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
              DLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 271 DSQDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 330

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNA TGSV
Sbjct: 331 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNAATGSV 390

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 240
           GGHETVKNSCSDIEMRKDKI+ESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF
Sbjct: 391 GGHETVKNSCSDIEMRKDKINESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGINFKRF 450

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 284
           RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 451 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 510

[Close]

BLAST of Cucsa.375320.2 vs. NCBI nr
Match: gi|659114408|ref|XP_008457038.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X2 [Cucumis melo])

HSP 1 Score: 505.8 bits (1301), Expect = 5.1e-140
Identity = 264/314 (84.08%), Postives = 272/314 (86.62%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQ----------------------------- 60
           MTVEGMHVKVVDP+TRKNCLSGYTFLLG  Q                             
Sbjct: 211 MTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMYKYGDRLKMLLQQVGGANVLSIEDFSSD 270

Query: 61  -SDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPCE 120
             DLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELILISSVLSGTLDRDNLIHPCE
Sbjct: 271 SQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPCE 330

Query: 121 PGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSVG 180
           PGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKSDEYLSR L+SVDNATTGS+G
Sbjct: 331 PGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSLG 390

Query: 181 GHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKRF 240
           GHE VKNS SDIEMRKDKI+ESD+RNIDIIFSQNLIVQHATK STLVTAEN+GI NFKRF
Sbjct: 391 GHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKRF 450

Query: 241 RKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 284
           RKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR
Sbjct: 451 RKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGRR 510

[Close]

BLAST of Cucsa.375320.2 vs. NCBI nr
Match: gi|659114412|ref|XP_008457040.1| (PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 6.6e-140
Identity = 264/315 (83.81%), Postives = 272/315 (86.35%), Query Frame = 1


Query: 1   MTVEGMHVKVVDPNTRKNCLSGYTFLLGNAQ----------------------------- 60
           MTVEGMHVKVVDP+TRKNCLSGYTFLLG  Q                             
Sbjct: 109 MTVEGMHVKVVDPSTRKNCLSGYTFLLGLTQMQYKYGDRLKMLLQQVGGANVLSIEDFSS 168

Query: 61  --SDLGNGENDRVVFVMPGGSVEKLDSSFKVDSYYKITELILISSVLSGTLDRDNLIHPC 120
              DLGNGENDRVVFVMPGGSVEK DSS KVDSYYKITELILISSVLSGTLDRDNLIHPC
Sbjct: 169 DSQDLGNGENDRVVFVMPGGSVEKWDSSSKVDSYYKITELILISSVLSGTLDRDNLIHPC 228

Query: 121 EPGSSTCSTDETVVAESDLETETSKPAVSNVQGPDAYVSKSDEYLSRPLISVDNATTGSV 180
           EPGSSTCSTDETVVAESDLETETSKP VSNVQGPD Y+SKSDEYLSR L+SVDNATTGS+
Sbjct: 229 EPGSSTCSTDETVVAESDLETETSKPVVSNVQGPDEYLSKSDEYLSRSLVSVDNATTGSL 288

Query: 181 GGHETVKNSCSDIEMRKDKIDESDSRNIDIIFSQNLIVQHATKPSTLVTAENNGI-NFKR 240
           GGHE VKNS SDIEMRKDKI+ESD+RNIDIIFSQNLIVQHATK STLVTAEN+GI NFKR
Sbjct: 289 GGHEIVKNSSSDIEMRKDKINESDNRNIDIIFSQNLIVQHATKASTLVTAENSGITNFKR 348

Query: 241 FRKTQTHSGNSFNNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 284
           FRKTQTHSGNSF+NLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR
Sbjct: 349 FRKTQTHSGNSFSNLVPFDKYPYKDNGDGREEIAESLKEERRRKETEAIAEDLFHNEKGR 408

The following BLAST results are available for this feature:

BLAST of Cucsa.375320.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NBS1_ARATH	2.0e-35	31.40	Nijmegen breakage syndrome 1 protein OS=Arabidopsis thaliana GN=NBS1 PE=1 SV=1	[more]
NBS1_ORYSJ	1.5e-30	27.35	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. japonica GN=NBS1 PE=...	[more]
NBS1_ORYSI	7.6e-19	40.00	Nijmegen breakage syndrome 1 protein OS=Oryza sativa subsp. indica GN=NBS1 PE=2 ...	[more]

BLAST of Cucsa.375320.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA01_CUCSA	3.1e-152	89.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G308200 PE=4 SV=1	[more]
A0A067K4W4_JATCU	3.3e-53	41.14	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21011 PE=4 SV=1	[more]
B9SIQ5_RICCO	7.3e-53	43.22	Nibrin, putative OS=Ricinus communis GN=RCOM_0538810 PE=4 SV=1	[more]
B9IDC7_POPTR	1.1e-51	41.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s12710g PE=4 SV=2	[more]
M5W7W1_PRUPE	6.8e-51	42.31	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004302mg PE=4 SV=1	[more]

BLAST of Cucsa.375320.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02680.1	1.1e-36	31.40	nijmegen breakage syndrome 1	[more]

BLAST of Cucsa.375320.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456249\|ref\|XP_004145862.1\|	4.4e-152	89.78	PREDICTED: nijmegen breakage syndrome 1 protein isoform X2 [Cucumis sativus]	[more]
gi\|700202671\|gb\|KGN57804.1\|	4.4e-152	89.78	hypothetical protein Csa_3G308200 [Cucumis sativus]	[more]
gi\|778680802\|ref\|XP_011651398.1\|	5.8e-152	89.49	PREDICTED: nijmegen breakage syndrome 1 protein isoform X1 [Cucumis sativus]	[more]
gi\|659114408\|ref\|XP_008457038.1\|	5.1e-140	84.08	PREDICTED: uncharacterized protein LOC103496815 isoform X2 [Cucumis melo]	[more]
gi\|659114412\|ref\|XP_008457040.1\|	6.6e-140	83.81	PREDICTED: uncharacterized protein LOC103496815 isoform X4 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0051276	chromosome organization
biological_process	GO:0006310	DNA recombination
biological_process	GO:0007126	meiotic nuclear division
biological_process	GO:0008152	metabolic process
biological_process	GO:0032501	multicellular organismal process
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0044767	single-organism developmental process
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.375320	Cucsa.375320	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.375320.2	Cucsa.375320.2-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.375320.2.CDS.6	Cucsa.375320.2.CDS.6	CDS
Cucsa.375320.2.CDS.5	Cucsa.375320.2.CDS.5	CDS
Cucsa.375320.2.CDS.4	Cucsa.375320.2.CDS.4	CDS
Cucsa.375320.2.CDS.3	Cucsa.375320.2.CDS.3	CDS
Cucsa.375320.2.CDS.2	Cucsa.375320.2.CDS.2	CDS
Cucsa.375320.2.CDS.1	Cucsa.375320.2.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.375320.2.three_prime_UTR.1	Cucsa.375320.2.three_prime_UTR.1	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.375320.2.five_prime_UTR.2	Cucsa.375320.2.five_prime_UTR.2	five_prime_UTR
Cucsa.375320.2.five_prime_UTR.1	Cucsa.375320.2.five_prime_UTR.1	five_prime_UTR