Cucsa.363280 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGA ATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGA ATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGA MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSIPTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFSMHLH*
BLAST of Cucsa.363280 vs. Swiss-Prot
Match: AGP25_ARATH (Classical arabinogalactan protein 25 OS=Arabidopsis thaliana GN=AGP25 PE=3 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13 Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Cucsa.363280 vs. TrEMBL
Match: A0A0A0KBF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G067960 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 3.3e-66 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1
BLAST of Cucsa.363280 vs. TrEMBL
Match: A0A061ENG2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_021121 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21 Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 1
BLAST of Cucsa.363280 vs. TrEMBL
Match: K7MAL5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.4e-18 Identity = 64/113 (56.64%), Postives = 70/113 (61.95%), Query Frame = 1
BLAST of Cucsa.363280 vs. TrEMBL
Match: A0A0R0G9N0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G098700 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.4e-18 Identity = 64/113 (56.64%), Postives = 70/113 (61.95%), Query Frame = 1
BLAST of Cucsa.363280 vs. TrEMBL
Match: B9HY55_POPTR (Hydroxyproline-rich glycoprotein OS=Populus trichocarpa GN=POPTR_0010s03290g PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.7e-18 Identity = 59/118 (50.00%), Postives = 70/118 (59.32%), Query Frame = 1
BLAST of Cucsa.363280 vs. TAIR10
Match: AT5G18690.1 (AT5G18690.1 arabinogalactan protein 25) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-14 Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 1
BLAST of Cucsa.363280 vs. NCBI nr
Match: gi|778710996|ref|XP_011656664.1| (PREDICTED: classical arabinogalactan protein 25 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 4.7e-66 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1
BLAST of Cucsa.363280 vs. NCBI nr
Match: gi|659117243|ref|XP_008458497.1| (PREDICTED: classical arabinogalactan protein 25 [Cucumis melo]) HSP 1 Score: 256.9 bits (655), Expect = 1.8e-65 Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 1
BLAST of Cucsa.363280 vs. NCBI nr
Match: gi|590660668|ref|XP_007035460.1| (Uncharacterized protein TCM_021121 [Theobroma cacao]) HSP 1 Score: 110.2 bits (274), Expect = 2.7e-21 Identity = 62/108 (57.41%), Postives = 73/108 (67.59%), Query Frame = 1
BLAST of Cucsa.363280 vs. NCBI nr
Match: gi|1009149765|ref|XP_015892654.1| (PREDICTED: classical arabinogalactan protein 26-like [Ziziphus jujuba]) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 1
BLAST of Cucsa.363280 vs. NCBI nr
Match: gi|1009159634|ref|XP_015897918.1| (PREDICTED: classical arabinogalactan protein 26-like [Ziziphus jujuba]) HSP 1 Score: 104.4 bits (259), Expect = 1.5e-19 Identity = 66/133 (49.62%), Postives = 82/133 (61.65%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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