Cucsa.362120 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.362120
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRNA-binding ASCH domain protein
Locationscaffold03611 : 106557 .. 109778 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTACGCAGCTAAAAGGTATTGTGAACTGAAAGTCAAATGTTATTAGTCTAGAGCAATAGGTATATCCAAGTTCCATAGTTTGTTGATTCACCACCTCAATGGACTGCCTTATAAATTTGTTTGTAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGGTATTTCTTTTAACACATATCATCATCGTACAAAATTCATTTCAAGTCTCACTTTAAATATAATTTAGTGCATAATTGTTCATTTGATCTATAATCCCATAGATTCCTTGTCAGTGTCATGCACTCTCGTCTCAATTGAACTAGAGCCCTCCTGGTTTTCTTTATAAAGCTAATTTTTtTTtAAAATAACAATAACAATAATATTGCCTATTCATAGATTTGATTTCCCCCTTTTCTTTGTGGCTGCAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGGTATATTGTATTGTTGCTTTTCATTTTGTATTCCTTTGGCTTAAGTTATTTTTTGTAACTTGCTAAACGATTGAGTATTGAAGGATATCCATCGGTATGTGTCTTTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTAATACCAAAACATAAAAACAGAAATTGGTTTGATACCAAACAGTCCAACGTTTTTGTAGAAACAGAAAATTTACTTCATGGAACATCTTTGCAGTTAATCTTATTGACTCAGATGGAACATGTTAACTTGATGAAGAAATTAGTTAAAGAACCAACTTTGGTTGAGTTGCTCCTTTGATGCATTTTTTATTCTTCTTGGAATAGTGATAATTGACCAGTCCATTTAATTCAACCATTAAAGCTATGATCAGCAAGACTGGCCCTTTTTTCAACTCTTAACCAGTTTGCAAGGATAAACATTAGAGAAGTGAGAAACTGGGCATATAATATTTGAGAGAGAGAAATAAAAATGAAACAAACCTAAAAAGTAGTAAATAGAGATGGTTGAAGTTGTTGAATTGAAACAGTGAATTTCTTCATAGGAAACAATTATGCTGCACATATTTTCAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGTGAGTTTTCTTTGTTGCTAAAATATATGGTGATAGAATAGCAAAATTTAAAAGAATTTCAGCATGTAGTCAAAGTTGTGAATATTTAGGAGTACATCTTGAATTGAATTAAATCATCTTAAAGTTCTAGGTCAATGCTACATGCCAGTCAAAGTTGTAGGACTAATAATATGAAGTTGTTAACAGACTTGTAACCTTAGATCACAAGTCCGATCTGTGGTACTGCATCTTCTAGTTTATTCTAATTGTGTACTTATGTTTATATATACGTATATATATGAAGTTATTAGCAGTTAGTCCTATGTGCTATTCGTTTATCTTTGACATAAGATCCGTTTAAATGAGGAGGAATATTGAAGTAGTATCAATGCTCGTGATGATAAGGTATGAATTCAATTCAAGAAGTCCTTCAGTTATATGTTGTGAACGCTATAAAGTTCAACTGCTGGATGTCTTTACATTTTGGACTCTTGTACCGATTTTCATTTTGCTTCATTCTTTGGCGCTTTCAGTTTAAATAAGGAAGTATATTTCATCTAATGTCGTTTTTGTGATTTTCTTTTACTTTCCCTGCTGTATTTTCCTCTTCTCAATGGCCCTCACATACAGCAAACTTTTTGTGTTAACTTGCTGACATTAGTCATATAGAAGTGCATGGTATACTATATAGTTTGCATTGATTATCAAATTCTCTACTCCAGGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGTCAGATTATATAATTCATGATGAGTTGCTTCATTTTTTATCCCAAGCGAAAAGAGTTTATTATGCTGCATGCGCTGTCCAGTCAATTCTATTGGTATTGAATAGTATTTTGACATCTAAATCAATTACTCCAAATTTCTGAAGTTTGGATATAGTGCTCTGCCTTCAACTTTAATCTCCTTATTTATAAATTTTACATCAAATAATAATCGCACTCCATTAAaAAAAAAGAAAGCATAAAATGTCAATCCTGAAAGAGAATAAGTAATTGAAATTTGGAATGGTTGAATTTAGTATGTCTTAACTATTGGATAGTACTTTAAGAAAAGTATAACTACTTTTCAAATCAAGCTTTGAAAGATGAACATTTACAGTTCTGTTTGTTACATACTTGTTTTTTGTGGTTTACTTGTCGCCCATTTATGGAAGTTAGTTTTCTTAATGAATCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGATTTTGTGATCTTGCATATGATGACTTGGATGAAGATTTTCATTCATGTGATTTCATCAATCAACTGTATATGCTACTCATTCGTTGATAGAATTTTCCTGCTATATATCTAACTATAAATTGAAGTATGTTTGCTATATAGTTCTAAGATTTAGGATATGATGTTTTATTCCTGTTGCATTAGTTGCACAATATATATGGACTCCATTGTTTTATTTTGCTTACCATCAAAATCATTTCTGCTTTAAGTTGTGAATTCCATTAAATTTTCATGTGTTATCTAAAAGTTCCATTTGTTAAGTACTTCCTTTCTTAGTTTTCTATTTTTGAAACTTAGGTTTCTTTCCTCTCAATTTCTTTACTACGGTGTTACTTTGTTTGTGAGGATAATTTTAGTTTAAATTGATCTACGATTCTCAATATGAAAATAATTTAATTTAACCAATAATGACATCATTTATAATAACCAATAAAACTATATAATATAACTTTGGTGATTAAAATAACATTATTTTTTtCTAAAAGTGTGAATGATAGTTTCTATTTTTTTTtGTTATCTCTTAATTTAAAATTACTTAAAAAGAACGTTACA

mRNA sequence

CTTTCTTTACGCAGCTAAAAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGATTTTGTGATCTTGCATATGATGACTTGGATGAAGATTTTCATTCATGTGATTTCATCAATCAACTGTATATGCTACTCATTCGTTGATAGAATTTTCCTGCTATATATCTAACTATAAATTGAAGTATGTTTGCTATATAGTTCTAAGATTTAGGATATGATGTTTTATTCCTGTTGCATTAGTTGCACAATATATATGGACTCCATTGTTTTATTTTGCTTACCATCAAAATCATTTCTGCTTTAAGTTGTGAATTCCATTAAATTTTCATGTGTTATCTAAAAGTTCCATTTGTTAAGTACTTCCTTTCTTAgttttctatttttgaaacttaggtttctttcctctcaatttctttactacggtgttACTTTGTTTGTGAGGATAATTTTAGTTTAAATTGATCTACGATTCTCAATATGAAAATAATTTAATTTAACCAATAATGACATCATTTATAATAACCAATAAAACTATATAATATAACTTTGGTGATTAAAATAACATTATTTTTTTCTAAAAGTGTGAATGATAGTTTCTATTTTTTTTTGTTATCTCTTAATTTAAAATTACTTAAAAAGAACGTTACA

Coding sequence (CDS)

TTCTTTACGCAGCTAAAAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGA

Protein sequence

FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILSENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGNGEQCLDFYNS*
Homology
[Close]
BLAST of Cucsa.362120 vs. TrEMBL
Match: A0A0A0KBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.5e-67
Identity = 139/152 (91.45%), Postives = 139/152 (91.45%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL             SENLQS
Sbjct: 130 FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDMLESENLQS 189

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL
Sbjct: 190 ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 249

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPE 140
           LGLAHTAGTVADALPPPRSALLSSFVLPYKPE
Sbjct: 250 LGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

[Close]
BLAST of Cucsa.362120 vs. TrEMBL
Match: B9T6H1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1205550 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48
Identity = 94/183 (51.37%), Postives = 131/183 (71.58%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FF+ LKDG KT+EG+ A   Y R+EPG L+++NK +V E+              +E+L  
Sbjct: 134 FFSLLKDGLKTIEGRCADDNYSRIEPGALLLINKSVVLEVKDVRRYPSFLKMLEAESLSK 193

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           +LPGV++I+EG+++ +    E++EM++ VLA+C+S  P+QPY+SLA ++SGL Y G+Q L
Sbjct: 194 VLPGVKTIEEGVEVYRKFYTEEKEMSNGVLAICVSKSPYQPYLSLARMLSGLGYTGIQSL 253

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 171
           LG+AHT GT++DALPP RS LLSSF LPY+P  KG  LTHGA+ALAKH  R S K+WG  
Sbjct: 254 LGIAHTVGTISDALPPSRSTLLSSFTLPYRPNVKGSALTHGARALAKHSERCSIKYWGIL 313

[Close]
BLAST of Cucsa.362120 vs. TrEMBL
Match: W9QWJ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 100/185 (54.05%), Postives = 136/185 (73.51%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FF+Q+KDG KT+EG+ A GKY R++ G LI++N+CL+FE+              +E L  
Sbjct: 135 FFSQMKDGLKTIEGRCATGKYSRIKSGSLILLNECLLFEVQDVHWYASFSKMLEAEGLAE 194

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           +LPGV+SI EG++I +    +++EM++ VLA+ IS V  QPY  LAAI+SGL+Y G+QGL
Sbjct: 195 VLPGVKSIIEGVEIYRKFYTKEKEMSNGVLAISISKVDPQPYTYLAAILSGLNYGGVQGL 254

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYK--PEGKGIKLTHGAKALAKHHHRSSSKHWG 171
           LGL +T GT+  ALPPPRSAL+SSF++PYK   E KGI LTHGA+ALAKH HR ++K+WG
Sbjct: 255 LGLTNTNGTIEHALPPPRSALVSSFMMPYKIDAEVKGITLTHGAQALAKHAHRCTNKYWG 314

[Close]
BLAST of Cucsa.362120 vs. TrEMBL
Match: A0A0D2RJP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 94/183 (51.37%), Postives = 133/183 (72.68%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FF+  +DG KT+EG  A+GKY+ +EPG +I++NKCLV E+              +E++  
Sbjct: 127 FFSMSRDGFKTIEGWCAVGKYNNIEPGSMILLNKCLVLEVQDVRHYATFSKMLEAESISQ 186

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           +LPGV+S +EGLQ  +    E+EE +  V+A+C+S++  QP I LA+I+S LS+EG+Q L
Sbjct: 187 VLPGVKSTEEGLQTYRKFYTEEEERSYGVIAICVSNLVVQPAILLASILSELSHEGVQSL 246

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 171
           LGLAHT GT++DALPPP+S LLSSF+L Y P+ KG  LTHGA+ALAKH +RSS+K+WG  
Sbjct: 247 LGLAHTTGTISDALPPPKSTLLSSFMLSYNPDVKGSTLTHGARALAKHINRSSNKYWGNL 306

[Close]
BLAST of Cucsa.362120 vs. TrEMBL
Match: A0A0D2RDB6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46
Identity = 94/183 (51.37%), Postives = 133/183 (72.68%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FF+  +DG KT+EG  A+GKY+ +EPG +I++NKCLV E+              +E++  
Sbjct: 127 FFSMSRDGFKTIEGWCAVGKYNNIEPGSMILLNKCLVLEVQDVRHYATFSKMLEAESISQ 186

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           +LPGV+S +EGLQ  +    E+EE +  V+A+C+S++  QP I LA+I+S LS+EG+Q L
Sbjct: 187 VLPGVKSTEEGLQTYRKFYTEEEERSYGVIAICVSNLVVQPAILLASILSELSHEGVQSL 246

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 171
           LGLAHT GT++DALPPP+S LLSSF+L Y P+ KG  LTHGA+ALAKH +RSS+K+WG  
Sbjct: 247 LGLAHTTGTISDALPPPKSTLLSSFMLSYNPDVKGSTLTHGARALAKHINRSSNKYWGNL 306

[Close]
BLAST of Cucsa.362120 vs. TAIR10
Match: AT2G43465.1 (AT2G43465.1 RNA-binding ASCH domain protein)

HSP 1 Score: 167.9 bits (424), Expect = 5.6e-42
Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 1 

Query: 2   FTQLKDGQKTVEGKYALGKYDRLEPG-MLIIVNKCLVFEIL-------------SENLQS 61
           F+ +KDG KTVE +    +YDR+  G  ++++NKCL+FE+L             +E+ + 
Sbjct: 135 FSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEVLELHQYASFYELLKAESSEK 194

Query: 62  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 121
           + PG ++++EG+Q+ + L   D+E  + V+A+ +S    QP ++LA I+SGLSY G+Q L
Sbjct: 195 VFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQPCVALAHILSGLSYTGVQNL 254

Query: 122 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 180
           LGL+HT G++  ALPPPRS LLSSF+LPYKP+ KG +L+HGA+ALAKH  RSS   WG  
Sbjct: 255 LGLSHTTGSIFHALPPPRSMLLSSFMLPYKPKIKGCRLSHGARALAKHVDRSSDGFWGVL 314

[Close]
BLAST of Cucsa.362120 vs. TAIR10
Match: AT3G03320.1 (AT3G03320.1 RNA-binding ASCH domain protein)

HSP 1 Score: 92.4 bits (228), Expect = 3.0e-19
Identity = 50/131 (38.17%), Postives = 78/131 (59.54%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILS-------------ENLQS 60
           +FTQLKDG KTVEG+ A+G Y R+  G  ++ NKCL+ E+               E L  
Sbjct: 115 YFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEMLKVEGLAK 174

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 119
           +LPGVESI+EG+Q+ ++   E++E  + V+A+ ++    QP  +LA ++S L   G++ L
Sbjct: 175 VLPGVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLSELKSSGIKSL 234

[Close]
BLAST of Cucsa.362120 vs. NCBI nr
Match: gi|778711432|ref|XP_011656730.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 1.9e-87
Identity = 170/183 (92.90%), Postives = 170/183 (92.90%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL             SENLQS
Sbjct: 130 FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDMLESENLQS 189

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL
Sbjct: 190 ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 249

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 171
           LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF
Sbjct: 250 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 309

[Close]
BLAST of Cucsa.362120 vs. NCBI nr
Match: gi|778711436|ref|XP_011656731.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 167/180 (92.78%), Postives = 167/180 (92.78%), Query Frame = 1 

Query: 4   QLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQSILP 63
           QLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL             SENLQSILP
Sbjct: 115 QLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDMLESENLQSILP 174

Query: 64  GVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGL 123
           GVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGL
Sbjct: 175 GVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGL 234

Query: 124 AHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGN 171
           AHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGN
Sbjct: 235 AHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGN 294

[Close]
BLAST of Cucsa.362120 vs. NCBI nr
Match: gi|659120123|ref|XP_008460026.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo])

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82
Identity = 159/186 (85.48%), Postives = 167/186 (89.78%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FFTQLKDGQKT+EGKYALGKYDRLEPGMLII NKCL+FEIL             SENLQS
Sbjct: 153 FFTQLKDGQKTIEGKYALGKYDRLEPGMLIIFNKCLLFEILDIRRYVSFSDMLESENLQS 212

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           ILPG+ESI+EGLQILKSLNRE+EEM DSVLALCIS VPFQPYISLAAIISGLSYEGLQGL
Sbjct: 213 ILPGIESINEGLQILKSLNREEEEMGDSVLALCISRVPFQPYISLAAIISGLSYEGLQGL 272

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTF 174
           LGLAHTAGTVAD LPPPRSALLSSFVLPYKP+GKGIKLTHGAKALAKHHHRSSSK+WGTF
Sbjct: 273 LGLAHTAGTVADVLPPPRSALLSSFVLPYKPKGKGIKLTHGAKALAKHHHRSSSKYWGTF 332

[Close]
BLAST of Cucsa.362120 vs. NCBI nr
Match: gi|659120126|ref|XP_008460027.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X2 [Cucumis melo])

HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79
Identity = 153/180 (85.00%), Postives = 161/180 (89.44%), Query Frame = 1 

Query: 7   DGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQSILPGVE 66
           DGQKT+EGKYALGKYDRLEPGMLII NKCL+FEIL             SENLQSILPG+E
Sbjct: 79  DGQKTIEGKYALGKYDRLEPGMLIIFNKCLLFEILDIRRYVSFSDMLESENLQSILPGIE 138

Query: 67  SIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGLAHT 126
           SI+EGLQILKSLNRE+EEM DSVLALCIS VPFQPYISLAAIISGLSYEGLQGLLGLAHT
Sbjct: 139 SINEGLQILKSLNREEEEMGDSVLALCISRVPFQPYISLAAIISGLSYEGLQGLLGLAHT 198

Query: 127 AGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGNGEQ 174
           AGTVAD LPPPRSALLSSFVLPYKP+GKGIKLTHGAKALAKHHHRSSSK+WGTFDGN  +
Sbjct: 199 AGTVADVLPPPRSALLSSFVLPYKPKGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSE 258

[Close]
BLAST of Cucsa.362120 vs. NCBI nr
Match: gi|778711443|ref|XP_011656732.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus])

HSP 1 Score: 263.1 bits (671), Expect = 3.6e-67
Identity = 139/152 (91.45%), Postives = 139/152 (91.45%), Query Frame = 1 

Query: 1   FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL-------------SENLQS 60
           FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEIL             SENLQS
Sbjct: 130 FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDMLESENLQS 189

Query: 61  ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 120
           ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL
Sbjct: 190 ILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGL 249

Query: 121 LGLAHTAGTVADALPPPRSALLSSFVLPYKPE 140
           LGLAHTAGTVADALPPPRSALLSSFVLPYKPE
Sbjct: 250 LGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

The following BLAST results are available for this feature:
BLAST of Cucsa.362120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBT7_CUCSA2.5e-6791.45Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1[more]
B9T6H1_RICCO1.5e-4851.37Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1205550 PE=4 SV=1[more]
W9QWJ8_9ROSA1.3e-4754.05Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1[more]
A0A0D2RJP5_GOSRA1.4e-4651.37Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1[more]
A0A0D2RDB6_GOSRA1.4e-4651.37Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1[more]
BLAST of Cucsa.362120 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43465.15.6e-4244.39 RNA-binding ASCH domain protein[more]
AT3G03320.13.0e-1938.17 RNA-binding ASCH domain protein[more]
BLAST of Cucsa.362120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778711432|ref|XP_011656730.1|1.9e-8792.90PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus][more]
gi|778711436|ref|XP_011656731.1|1.7e-8592.78PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus][more]
gi|659120123|ref|XP_008460026.1|1.1e-8285.48PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo][more]
gi|659120126|ref|XP_008460027.1|4.2e-7985.00PREDICTED: uncharacterized protein LOC103498964 isoform X2 [Cucumis melo][more]
gi|778711443|ref|XP_011656732.1|3.6e-6791.45PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.362120.1Cucsa.362120.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015947PUA-like domainunknownSSF88697PUA domain-likecoord: 1..86
score: 3.7
NoneNo IPR availableGENE3DG3DSA:3.10.480.10coord: 2..87
score: 1.
NoneNo IPR availablePANTHERPTHR34204FAMILY NOT NAMEDcoord: 1..170
score: 8.3
NoneNo IPR availablePANTHERPTHR34204:SF2RNA-BINDING ASCH DOMAIN PROTEINcoord: 1..170
score: 8.3