Cucsa.362120.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTTTACGCAGCTAAAAGGTATTGTGAACTGAAAGTCAAATGTTATTAGTCTAGAGCAATAGGTATATCCAAGTTCCATAGTTTGTTGATTCACCACCTCAATGGACTGCCTTATAAATTTGTTTGTAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGGTATTTCTTTTAACACATATCATCATCGTACAAAATTCATTTCAAGTCTCACTTTAAATATAATTTAGTGCATAATTGTTCATTTGATCTATAATCCCATAGATTCCTTGTCAGTGTCATGCACTCTCGTCTCAATTGAACTAGAGCCCTCCTGGTTTTCTTTATAAAGCTAATTTTTtTTtAAAATAACAATAACAATAATATTGCCTATTCATAGATTTGATTTCCCCCTTTTCTTTGTGGCTGCAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGGTATATTGTATTGTTGCTTTTCATTTTGTATTCCTTTGGCTTAAGTTATTTTTTGTAACTTGCTAAACGATTGAGTATTGAAGGATATCCATCGGTATGTGTCTTTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTAATACCAAAACATAAAAACAGAAATTGGTTTGATACCAAACAGTCCAACGTTTTTGTAGAAACAGAAAATTTACTTCATGGAACATCTTTGCAGTTAATCTTATTGACTCAGATGGAACATGTTAACTTGATGAAGAAATTAGTTAAAGAACCAACTTTGGTTGAGTTGCTCCTTTGATGCATTTTTTATTCTTCTTGGAATAGTGATAATTGACCAGTCCATTTAATTCAACCATTAAAGCTATGATCAGCAAGACTGGCCCTTTTTTCAACTCTTAACCAGTTTGCAAGGATAAACATTAGAGAAGTGAGAAACTGGGCATATAATATTTGAGAGAGAGAAATAAAAATGAAACAAACCTAAAAAGTAGTAAATAGAGATGGTTGAAGTTGTTGAATTGAAACAGTGAATTTCTTCATAGGAAACAATTATGCTGCACATATTTTCAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGTGAGTTTTCTTTGTTGCTAAAATATATGGTGATAGAATAGCAAAATTTAAAAGAATTTCAGCATGTAGTCAAAGTTGTGAATATTTAGGAGTACATCTTGAATTGAATTAAATCATCTTAAAGTTCTAGGTCAATGCTACATGCCAGTCAAAGTTGTAGGACTAATAATATGAAGTTGTTAACAGACTTGTAACCTTAGATCACAAGTCCGATCTGTGGTACTGCATCTTCTAGTTTATTCTAATTGTGTACTTATGTTTATATATACGTATATATATGAAGTTATTAGCAGTTAGTCCTATGTGCTATTCGTTTATCTTTGACATAAGATCCGTTTAAATGAGGAGGAATATTGAAGTAGTATCAATGCTCGTGATGATAAGGTATGAATTCAATTCAAGAAGTCCTTCAGTTATATGTTGTGAACGCTATAAAGTTCAACTGCTGGATGTCTTTACATTTTGGACTCTTGTACCGATTTTCATTTTGCTTCATTCTTTGGCGCTTTCAGTTTAAATAAGGAAGTATATTTCATCTAATGTCGTTTTTGTGATTTTCTTTTACTTTCCCTGCTGTATTTTCCTCTTCTCAATGGCCCTCACATACAGCAAACTTTTTGTGTTAACTTGCTGACATTAGTCATATAGAAGTGCATGGTATACTATATAGTTTGCATTGATTATCAAATTCTCTACTCCAGGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGTCAGATTATATAATTCATGATGAGTTGCTTCATTTTTTATCCCAAGCGAAAAGAGTTTATTATGCTGCATGCGCTGTCCAGTCAATTCTATTGGTATTGAATAGTATTTTGACATCTAAATCAATTACTCCAAATTTCTGAAGTTTGGATATAGTGCTCTGCCTTCAACTTTAATCTCCTTATTTATAAATTTTACATCAAATAATAATCGCACTCCATTAAaAAAAAAGAAAGCATAAAATGTCAATCCTGAAAGAGAATAAGTAATTGAAATTTGGAATGGTTGAATTTAGTATGTCTTAACTATTGGATAGTACTTTAAGAAAAGTATAACTACTTTTCAAATCAAGCTTTGAAAGATGAACATTTACAGTTCTGTTTGTTACATACTTGTTTTTTGTGGTTTACTTGTCGCCCATTTATGGAAGTTAGTTTTCTTAATGAATCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGATTTTGTGATCTTGCATATGATGACTTGGATGAAGATTTTCATTCATGTGATTTCATCAATCAACTGTATATGCTACTCATTCGTTGATAGAATTTTCCTGCTATATATCTAACTATAAATTGAAGTATGTTTGCTATATAGTTCTAAGATTTAGGATATGATGTTTTATTCCTGTTGCATTAGTTGCACAATATATATGGACTCCATTGTTTTATTTTGCTTACCATCAAAATCATTTCTGCTTTAAGTTGTGAATTCCATTAAATTTTCATGTGTTATCTAAAAGTTCCATTTGTTAAGTACTTCCTTTCTTAGTTTTCTATTTTTGAAACTTAGGTTTCTTTCCTCTCAATTTCTTTACTACGGTGTTACTTTGTTTGTGAGGATAATTTTAGTTTAAATTGATCTACGATTCTCAATATGAAAATAATTTAATTTAACCAATAATGACATCATTTATAATAACCAATAAAACTATATAATATAACTTTGGTGATTAAAATAACATTATTTTTTtCTAAAAGTGTGAATGATAGTTTCTATTTTTTTTtGTTATCTCTTAATTTAAAATTACTTAAAAAGAACGTTACA CTTTCTTTACGCAGCTAAAAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGATTTTGTGATCTTGCATATGATGACTTGGATGAAGATTTTCATTCATGTGATTTCATCAATCAACTGTATATGCTACTCATTCGTTGATAGAATTTTCCTGCTATATATCTAACTATAAATTGAAGTATGTTTGCTATATAGTTCTAAGATTTAGGATATGATGTTTTATTCCTGTTGCATTAGTTGCACAATATATATGGACTCCATTGTTTTATTTTGCTTACCATCAAAATCATTTCTGCTTTAAGTTGTGAATTCCATTAAATTTTCATGTGTTATCTAAAAGTTCCATTTGTTAAGTACTTCCTTTCTTAgttttctatttttgaaacttaggtttctttcctctcaatttctttactacggtgttACTTTGTTTGTGAGGATAATTTTAGTTTAAATTGATCTACGATTCTCAATATGAAAATAATTTAATTTAACCAATAATGACATCATTTATAATAACCAATAAAACTATATAATATAACTTTGGTGATTAAAATAACATTATTTTTTTCTAAAAGTGTGAATGATAGTTTCTATTTTTTTTTGTTATCTCTTAATTTAAAATTACTTAAAAAGAACGTTACA TTCTTTACGCAGCTAAAAGATGGCCAAAAGACAGTAGAAGGAAAGTATGCTTTGGGCAAATACGATAGACTTGAACCAGGAATGCTGATTATCGTCAATAAATGTCTTGTATTTGAAATCTTGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATCGATGAAGGTTTGCAAATATTGAAATCTTTGAACAGAGAAGACGAAGAAATGGCTGACAGTGTTCTTGCTCTATGCATTTCAAGTGTGCCATTTCAGCCATACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTTGGCTTGGCACATACCGCAGGAACGGTTGCTGATGCTCTTCCCCCACCAAGATCAGCTCTTTTATCTTCGTTTGTGCTTCCATATAAACCCGAGGGTAAAGGCATAAAGTTAACTCACGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAACATTGGGGTACTTTTGATGGAAATGGTGAGCAGTGTCTTGATTTCTATAATTCTTGA FFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILSENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGLSYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPEGKGIKLTHGAKALAKHHHRSSSKHWGTFDGNGEQCLDFYNS*
BLAST of Cucsa.362120.1 vs. TrEMBL
Match: A0A0A0KBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 2.5e-67 Identity = 139/152 (91.45%), Postives = 139/152 (91.45%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TrEMBL
Match: B9T6H1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1205550 PE=4 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.5e-48 Identity = 94/183 (51.37%), Postives = 131/183 (71.58%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TrEMBL
Match: W9QWJ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47 Identity = 100/185 (54.05%), Postives = 136/185 (73.51%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TrEMBL
Match: A0A0D2RJP5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46 Identity = 94/183 (51.37%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TrEMBL
Match: A0A0D2RDB6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G126300 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.4e-46 Identity = 94/183 (51.37%), Postives = 133/183 (72.68%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TAIR10
Match: AT2G43465.1 (AT2G43465.1 RNA-binding ASCH domain protein) HSP 1 Score: 167.9 bits (424), Expect = 5.6e-42 Identity = 87/196 (44.39%), Postives = 128/196 (65.31%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. TAIR10
Match: AT3G03320.1 (AT3G03320.1 RNA-binding ASCH domain protein) HSP 1 Score: 92.4 bits (228), Expect = 3.0e-19 Identity = 50/131 (38.17%), Postives = 78/131 (59.54%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. NCBI nr
Match: gi|778711432|ref|XP_011656730.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus]) HSP 1 Score: 330.5 bits (846), Expect = 1.9e-87 Identity = 170/183 (92.90%), Postives = 170/183 (92.90%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. NCBI nr
Match: gi|778711436|ref|XP_011656731.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus]) HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85 Identity = 167/180 (92.78%), Postives = 167/180 (92.78%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. NCBI nr
Match: gi|659120123|ref|XP_008460026.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo]) HSP 1 Score: 314.7 bits (805), Expect = 1.1e-82 Identity = 159/186 (85.48%), Postives = 167/186 (89.78%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. NCBI nr
Match: gi|659120126|ref|XP_008460027.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X2 [Cucumis melo]) HSP 1 Score: 302.8 bits (774), Expect = 4.2e-79 Identity = 153/180 (85.00%), Postives = 161/180 (89.44%), Query Frame = 1
BLAST of Cucsa.362120.1 vs. NCBI nr
Match: gi|778711443|ref|XP_011656732.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus]) HSP 1 Score: 263.1 bits (671), Expect = 3.6e-67 Identity = 139/152 (91.45%), Postives = 139/152 (91.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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