Cla007023 (gene) Watermelon (97103) v1

Overview
NameCla007023
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRNA-binding ASCH domain protein (AHRD V1 **-- F4IR54_ARATH); contains Interpro domain(s) IPR010759 ProFAR isomerase-like
LocationChr6 : 921080 .. 925771 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTAAAAATGGAAAACTCGCTCTTTCTTTTGTGTATTCTCTGTTTATTTAAGTTTTCCCTCCAAGTGCTGTTGCAAGATTTGTAAGGCTTTAGGAAGAAAGTAGGGAAGAATCGCTGAGAAGTTTTTTATAACTGAATGTCAGGACTCACTCGTTGCATTATATGCTTAGGACCCATCCCACCAACAAGGGTTTTCTTTATTGAAGTTGTCTTCATTTAGTCCATGTCTAGTTCAAATTTTGTAATGACGTAGTCTATCAAATTTAGTATGTGATAATTTAAGGTGTATTTGAAATACATTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGGAAGAAATTAGAGTGTTTGACAACTACTCTTTAATCAATTTTTATAAAAAATATTTAAATAAAAATGAGTTTTTTGAAAAACATTGTTTTCTTAAATCAATCCAAATGGGTCCTTAATTGTTGTAGTCCAAGGGTGTCTTTGGTTCAATTTTCAAATGTTTAATTTAAAAAATAAGTCATTTTGGAAAAAGTTGGAGTGTTTGATAACCACTCAAAATAGTTTTTGAAACAATTTAAAATGTATTTTAAATAATTTTTATTAGAAGAGTTTAAATAAAAATGAATTTTTTGAAAAATATTTTTTTCTTCTATTCAATCCAAACAGGCCCTAAGATTTATATTGATTAGCTCCTGTTGTAGAAAATCCAGCTAAGGGGCAATGGGTTCTTCTTTTTTCATTTGTAGATGAACAAATCATTCAAAGGACTACACGTGTTTCAATTGCTACATTTTGAAGGTCTTTTTGTTATTATTCGCCAAGTCTCATGATACTTGATTGGAGCCCTCTTCTTTTGAGTTGGCTCCCTGTTTTGTGGGCTTCTCCTTTTTGTATGCCAATGTGTTCTTTCATTTCTTTTTTCCATTAAAAGTCCAGTTTTTTCATAGAAAAAAAAGTTGCTACATGTTGAAGGTTGGTATTTCACCATGATAGAAATTTTCACAGCAAGGGTCTAATGGTTCAATAATCCACAAGGACTAATAAAAACAACCTTAGGGAGTAGATCATACTTTAATGAAAGTACCGGGACCAAATATATTTTAGCTGGGTCAAAACCAATCCTAAAGTTGAGGATGTTGACAATTTCTGTTCTTTAATGATTTGTGGGAAAGAAAAATCCTTTCGTTAACAAACAAATTGAGCCCCCTCCTACTTCCCCTGTTCTGGTGGGAATGAGGATGAATGGAGGAAAATGGAGATGCTTACTTAAAAAAAAAACTATTTGGTTTGAAGAATATTTCATTGCCTACTCAGATTGTCAATAACTCATCAGGATGACTTTTTGATTTAGCTCAAGGGCATCAATATAAAATTGTATGGTTCTTTTTAATGAAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGGTAACCGATAGATGTAATTTTCTTTTTGTAGTAACTGATAAGATCAACTTTATCCTGCATTAAAAGACTCTTTTATTTCAGCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGGTATTGTGAATTGGAAGTCAATGTTATTAATCTAGACTCTAGAGCAATGGGTATATCCAAGTTTCGTAGTTTGTTGATTGACCACACCAATATGGATTGCCTTATAAATTTGTTTGTAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGGTATTTTTTTTTTTTTTGTCACATGTCATCATTGTACAAATTTGATGTCAACTCTCACCTTAAATATAACTAAGTTAGTGTAGTACCTTAACATATATTGTTTATTTGATCCATAACCCAACCCAACCCAAATGAGTTAATAGTCCATGCACTCTTGATTGAACTAGCTCTCCTGGTTTGCTTTATTTATTTATTTATAACAATAATAATAATAATAATAATAATAATAATAATAATAATAATATTGCCAATTCATAGTTTTGATTTCCCCCTTTTCTCTCTTGCTGCAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGTAAATTGTGTTCTTGCTTTCTATTTTGTATCCCTTTGGCTTTATTCTTTGTAACTTGGTAAACTATTGAGTATTGAAGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTAATCTCTTGTAAATCTATACAACTTTTTCTTGACTGTTTAAATAGTTAAACAAGTTTTTCCATCTTGAAAAATGTACTACTTTATAAATTATTATGCAGACTTTTGAAATTTTTATCAAAATTTAAGATGATATTTAAAGATCCATTTGATTGGTGATCTAAAAAAAGATTGTTTTATTGTATTTCTTTAATCGGAATATGCATTTGATAGCAGAACTTGTAGCAGATTTTTTAAATTTAAAGTTGGAGAACTGTATTTGTGATTGAATATTGAAAAGGTAGAAAATAGAGCGTGTGGTTGTTATCATCATCTCTTTTTTTTTTTTTTTTTTTAAATGACGCAATGAAATATGTTTTTGGTGGAGAGGTGGATATTTCTTATAAAGAGATGCTATGATTTATGAGATTAGCACAAGGCTCCATAATTTAGAAAATTTTGTTCTGTTTTTCCACAATTTAAAACTATTGAATCTGAAAACAAAGGAAATATTAAAAATGAAGTTTTAAAAATTGACTTCACTATATTACTGTTTTTGGAAATAATTGGTGAAAATAAGCATGCCAAATGCAAATTTAGGATACTTTGGGTTTTTTTCCCCCAAGAGATAAAAACAGAAACTGGTTAGATACCAAACAGTCCCCAAGTTAGAAAAGTTACTTCTTAGAACATCTTTGCAGTTATTCTTATTGCCTCAGATAGAACAGGTTAACTTGGTGAAGAGATTAATTAAGGAACCAACTTTGGTTGAGTTGCTCCTTTGATGCATTTCATTTTCTTCTCGGAATAATGATCATTGACCAGTCCATTTAATTCCACCATTTAAGCTATGACTATGACCAGCAATACTGGCCCTTTTTTTTCAACTCTGAACCAGTTTGCAACGATAAACATTTGAGAACTGAGAAAGTGGGCATAGAATATTTGAGAAAGAGAATAACAAAAGAGAAACAAACCTAAAAAGTAGTAAATAGAGATGGTGAAGTTGTTGAATTGAATCAGTGAATTTATTCATAGTGAACGATTATGTTGCATTACACATATTTTCAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGTGAGTTTTCTTTCTTTCTTAAATCCATGATGATGCACTAGCAAAATTAAGAATTTCAGCATGTAGTCAGAATTTTGGATATTTTGGACTAAATCTTGATTTGAATTAATTATCTGTCATTTCAGAGTTCTACGTAAATGCTACATGCCATTCTCCAATGTAGTAGGTCTTATAATATGAAGTTATGAACAGACTTGTAACCTTGAGGGCACAAGTTTGATATGCGGTATTGCATCTTCTTGTTTATTATAATCATATACATATGTATATATATGTATATGAAATTATTAACAGTTAGTCCTATGTGCTGTTAGTTTATCTTTGACATAAGAACTGTTTAAATAAGGAGGAATGTTGAAGTAGTATCAAAGCACGTGATGATAATGTAAGAATTTAATTCAAGAAATCCTTCAATTATATGTTGTGATTTGTGAACGCTATAAGTTCAAACTGCTGGATGTCTATACTCTTTTAAGGGTTGAAGCTTTAAGATAGTGCTAGACTATTTTTTCCAGATTTTGCAAGGAATAAGGATATAAGTAGTATAGGAATATTGGTTTTTTCCCACCAAATGTCGTTTTTGTGATTTCCTTTTATTTTTCCTGCTGTGTTTTCCTTTTCTAAATGGTCCTCGTATAGAGCAAATTTTTGTATTAACTTCCTGACATTAGTTATATAGAAGTGAGGTATCTAGTTTGTTTTGATTATCTAATTCTCTAGTCCAGGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGGTCAGATTCTGTATTCATGATGAGTTGCTTCACCTTTGCTCCCAAGCGAAAAGAGTTATAATACATGTTGCATGTGCTGTCTATTCAATTTTGTTGGTATTGAATAGCATGTTTTGA

mRNA sequence

ATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGGTCAGATTCTGTATTCATGATGAGTTGCTTCACCTTTGCTCCCAAGCGAAAAGAGTTATAATACATGTTGCATGTGCTGTCTATTCAATTTTGTTGGTATTGAATAGCATGTTTTGA

Coding sequence (CDS)

ATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGGTCAGATTCTGTATTCATGATGAGTTGCTTCACCTTTGCTCCCAAGCGAAAAGAGTTATAATACATGTTGCATGTGCTGTCTATTCAATTTTGTTGGTATTGAATAGCATGTTTTGA

Protein sequence

MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEVRFCIHDELLHLCSQAKRVIIHVACAVYSILLVLNSMF
Homology
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BLAST of Cla007023 vs. TrEMBL
Match: A0A0A0KBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.2e-138
Identity = 246/280 (87.86%), Postives = 264/280 (94.29%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

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BLAST of Cla007023 vs. TrEMBL
Match: D7SPV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.2e-82
Identity = 155/285 (54.39%), Postives = 211/285 (74.04%), Query Frame = 1 

Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPST--SNPLPDSKAGVPPY 61
           ++L +CV+EL+K+ L+SS NGTL+ DLGL   +CS LLK D  T  ++   DS  GVPPY
Sbjct: 17  VDLANCVEELVKYTLYSSVNGTLEIDLGLSKDYCSALLKDDHLTDPTSISTDSFEGVPPY 76

Query: 62  PLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTL 121
           PLYKR++ AL+ ++ SG F  +Y  M + + +SSLKQKEE W KL++DKG E+V +LKT+
Sbjct: 77  PLYKRLSAALYRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKGLELVNILKTI 136

Query: 122 NLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSD 181
           + EL+V EPFF+QLKDG K +EG+ A+G Y+R+  G LI+FNKCLV E+ D+RRYAS S 
Sbjct: 137 DFELHVQEPFFSQLKDGLKIIEGRCAVGDYNRIGSGALILFNKCLVLEVQDVRRYASFSQ 196

Query: 182 MLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISG 241
           +LESE L  +LPGV++I+EG+QI +    +E+  ++ VLAIC++    QPYI LA I+ G
Sbjct: 197 LLESEGLAEVLPGVKTIEEGVQIYRKFYTKEKERSNGVLAICVAKPAAQPYIFLAYILFG 256

Query: 242 LSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEVRFC 285
           LSY G+Q LLG  HT+GT+P+ LPPPRS LLSSF+ P+KP V  C
Sbjct: 257 LSYGGVQRLLGFMHTVGTIPEALPPPRSTLLSSFMSPHKPNVESC 300

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BLAST of Cla007023 vs. TrEMBL
Match: W9QWJ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.0e-79
Identity = 154/282 (54.61%), Postives = 205/282 (72.70%), Query Frame = 1 

Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLP-----DSKAGV 61
           +NL +C +ELLK+ + S  + TL+FD+GL   FCS LL  DP   +P P     DS  GV
Sbjct: 4   VNLRNCTEELLKYTIQSRISETLEFDIGLSEDFCSRLLNSDPC-DDPFPASHSTDSMEGV 63

Query: 62  PPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQML 121
           PP+PLYK +  AL +++ SGTF   Y RM M   E+SLKQKE  W KLI +KGSE V +L
Sbjct: 64  PPHPLYKHLAYALQQSMTSGTFYRTYNRMPMIGTENSLKQKEHFWQKLISEKGSEFVNVL 123

Query: 122 KTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYAS 181
           +T++LELYV+EPFF+Q+KDG K++EG+ A GKY R++ G LI+ N+CL+FE+ D+  YAS
Sbjct: 124 RTIDLELYVEEPFFSQMKDGLKTIEGRCATGKYSRIKSGSLILLNECLLFEVQDVHWYAS 183

Query: 182 VSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAI 241
            S MLE+E L  +LPGV+SI EG++I +    +E+ M++ VLAI IS V  QPY  LAAI
Sbjct: 184 FSKMLEAEGLAEVLPGVKSIIEGVEIYRKFYTKEKEMSNGVLAISISKVDPQPYTYLAAI 243

Query: 242 ISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYK 279
           +SGL+Y G+QGLLGLT+T GT+   LPPPRSAL+SSF++PYK
Sbjct: 244 LSGLNYGGVQGLLGLTNTNGTIEHALPPPRSALVSSFMMPYK 284

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BLAST of Cla007023 vs. TrEMBL
Match: A0A067DQD7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022692mg PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.6e-75
Identity = 146/291 (50.17%), Postives = 206/291 (70.79%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDP------STSNPLP---D 60
           M  L+DC++ELLKF L S  + TLDFDLG+ S FC+ LL+ DP      STS       D
Sbjct: 1   MERLKDCMEELLKFTLSSHIDETLDFDLGISSKFCTNLLQDDPNDAVSPSTSFDFDSDED 60

Query: 61  SKAGVPPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGS- 120
           S  GVP YPLYKR+ LAL  ++  G FC  YK++ + N E  L+QKEE W +LI++KGS 
Sbjct: 61  SLQGVPLYPLYKRLALALCRSVNCGAFCRTYKKVALMNEECFLEQKEEEWSQLILNKGSS 120

Query: 121 EMVQMLKTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILD 180
           ++V +LK +  EL+V EPFF+ +KDG +++EG+  +  Y+ + PG +I+ NKC++ ++  
Sbjct: 121 DLVDILKAVEFELHVQEPFFSFIKDGLETVEGRCTISDYNSIGPGSVILLNKCMMLKVQS 180

Query: 181 IRRYASVSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPY 240
           +  Y S S+MLE+E+L  +LPGV++I+EG+QI +    EE+  ++ VLAICIS +  QPY
Sbjct: 181 VCHYDSFSEMLEAESLVKVLPGVKTIEEGVQIYRKFYTEEKERSNGVLAICISKMATQPY 240

Query: 241 ISLAAIISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEV 282
           ++LA+I+SGL Y G+Q LLGL+HT GT+ D LPPPRSALLSSF+LP+KP V
Sbjct: 241 VTLASILSGLGYVGIQSLLGLSHTAGTISDALPPPRSALLSSFMLPFKPNV 291

[Close]
BLAST of Cla007023 vs. TrEMBL
Match: A0A061EJI0_THECC (RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019975 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 7.6e-75
Identity = 144/283 (50.88%), Postives = 199/283 (70.32%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNP-LPDSKAGVPPY 60
           M  L +C++ELLKF L S  N +L+F+L L   FCSGLL  DP+  NP  PD   GVP Y
Sbjct: 1   MERLGECIEELLKFTLQSHINKSLNFELRLSPEFCSGLLNSDPADPNPGPPDILKGVPSY 60

Query: 61  PLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTL 120
           PLYK + LAL++++ SG+ C     + + + E S KQKEE W KL+ +KG E++ ++  +
Sbjct: 61  PLYKHLALALYQSIVSGSICNTQHNLGLMHDEISTKQKEE-WNKLVSNKGLELINIMDNI 120

Query: 121 NLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSD 180
             EL+V EPFF+ L+DG K++EG+ A GKY+ +EPG +I+FNKCLV E+ D+ RYA+ S 
Sbjct: 121 EFELHVQEPFFSMLRDGLKTIEGRCAGGKYNNIEPGAMILFNKCLVLEVQDVHRYATFSK 180

Query: 181 MLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISG 240
           MLE+E+L  +LPGV+S +EGLQI +    EE+  ++ V AIC+S++  QP I LA+I+S 
Sbjct: 181 MLEAESLLQVLPGVKSTEEGLQIYRKFYTEEKESSNGVFAICVSNLVAQPSILLASILSE 240

Query: 241 LSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEVR 283
           LSYEG+Q LL L HT GT+   LPPP+S LL SF+LPY P+VR
Sbjct: 241 LSYEGVQRLLALAHTPGTISGALPPPKSTLLLSFMLPYNPDVR 282

[Close]
BLAST of Cla007023 vs. NCBI nr
Match: gi|659120123|ref|XP_008460026.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 7.4e-140
Identity = 247/280 (88.21%), Postives = 267/280 (95.36%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           MI LEDCVQELLKFVL SS+NGTLDFDLGL +AFCS LLKHDPSTSNPLPDSKAGVPPYP
Sbjct: 25  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYP 84

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R+TLALWE+LCSGTFCPMY++M MKNGESSLKQKEEIW+KLI+DKGSEMVQMLKT+N
Sbjct: 85  LYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTIN 144

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           L+LY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLIIFNKCL+FEILDIRRY S SDM
Sbjct: 145 LDLYIDEPFFTQLKDGQKTIEGKYALGKYDRLEPGMLIIFNKCLLFEILDIRRYVSFSDM 204

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPG+ESI+EGLQILKSLN+EEE M DSVLA+CIS VPFQPYISLAAIISGL
Sbjct: 205 LESENLQSILPGIESINEGLQILKSLNREEEEMGDSVLALCISRVPFQPYISLAAIISGL 264

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV DVLPPPRSALLSSFVLPYKP+
Sbjct: 265 SYEGLQGLLGLAHTAGTVADVLPPPRSALLSSFVLPYKPK 304

[Close]
BLAST of Cla007023 vs. NCBI nr
Match: gi|778711432|ref|XP_011656730.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 3.1e-138
Identity = 246/280 (87.86%), Postives = 264/280 (94.29%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

[Close]
BLAST of Cla007023 vs. NCBI nr
Match: gi|778711443|ref|XP_011656732.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 3.1e-138
Identity = 246/280 (87.86%), Postives = 264/280 (94.29%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

[Close]
BLAST of Cla007023 vs. NCBI nr
Match: gi|778711436|ref|XP_011656731.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 1.5e-124
Identity = 230/280 (82.14%), Postives = 246/280 (87.86%), Query Frame = 1 

Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQ      
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQ------ 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
                       LKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 ------------LKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 263

[Close]
BLAST of Cla007023 vs. NCBI nr
Match: gi|359495929|ref|XP_002272151.2| (PREDICTED: uncharacterized protein LOC100242314 [Vitis vinifera])

HSP 1 Score: 313.9 bits (803), Expect = 3.2e-82
Identity = 155/285 (54.39%), Postives = 211/285 (74.04%), Query Frame = 1 

Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPST--SNPLPDSKAGVPPY 61
           ++L +CV+EL+K+ L+SS NGTL+ DLGL   +CS LLK D  T  ++   DS  GVPPY
Sbjct: 17  VDLANCVEELVKYTLYSSVNGTLEIDLGLSKDYCSALLKDDHLTDPTSISTDSFEGVPPY 76

Query: 62  PLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTL 121
           PLYKR++ AL+ ++ SG F  +Y  M + + +SSLKQKEE W KL++DKG E+V +LKT+
Sbjct: 77  PLYKRLSAALYRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKGLELVNILKTI 136

Query: 122 NLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSD 181
           + EL+V EPFF+QLKDG K +EG+ A+G Y+R+  G LI+FNKCLV E+ D+RRYAS S 
Sbjct: 137 DFELHVQEPFFSQLKDGLKIIEGRCAVGDYNRIGSGALILFNKCLVLEVQDVRRYASFSQ 196

Query: 182 MLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISG 241
           +LESE L  +LPGV++I+EG+QI +    +E+  ++ VLAIC++    QPYI LA I+ G
Sbjct: 197 LLESEGLAEVLPGVKTIEEGVQIYRKFYTKEKERSNGVLAICVAKPAAQPYIFLAYILFG 256

Query: 242 LSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEVRFC 285
           LSY G+Q LLG  HT+GT+P+ LPPPRS LLSSF+ P+KP V  C
Sbjct: 257 LSYGGVQRLLGFMHTVGTIPEALPPPRSTLLSSFMSPHKPNVESC 300

The following BLAST results are available for this feature:
BLAST of Cla007023 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBT7_CUCSA2.2e-13887.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1[more]
D7SPV8_VITVI2.2e-8254.39Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=... [more]
W9QWJ8_9ROSA1.0e-7954.61Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1[more]
A0A067DQD7_CITSI7.6e-7550.17Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022692mg PE=4 SV=1[more]
A0A061EJI0_THECC7.6e-7550.88RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_01... [more]
BLAST of Cla007023 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120123|ref|XP_008460026.1|7.4e-14088.21PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo][more]
gi|778711432|ref|XP_011656730.1|3.1e-13887.86PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus][more]
gi|778711443|ref|XP_011656732.1|3.1e-13887.86PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus][more]
gi|778711436|ref|XP_011656731.1|1.5e-12482.14PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus][more]
gi|359495929|ref|XP_002272151.2|3.2e-8254.39PREDICTED: uncharacterized protein LOC100242314 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015947PUA-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU68083watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla007023Cla007023.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU68083WMU68083transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015947PUA-like domainunknownSSF88697PUA domain-likecoord: 122..227
score: 7.21
NoneNo IPR availableGENE3DG3DSA:3.10.480.10coord: 122..224
score: 4.1
NoneNo IPR availablePANTHERPTHR34204FAMILY NOT NAMEDcoord: 1..284
score: 9.6
NoneNo IPR availablePANTHERPTHR34204:SF2RNA-BINDING ASCH DOMAIN PROTEINcoord: 1..284
score: 9.6