MELO3C022438 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022438
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA-binding ASCH domain protein
Location	chr11 : 30682831 .. 30683941 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTAAAACAACAAACTTGAGTACCCATCATCGATCTTCATCTTGTCCAGAAGGCTCTCCGTCTCCGATTATGATCAAACTCGAGGATTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCAATCATCCACTAATGGAACGCTAGACTTTGATTTGGGTCTCTCCACTGCCTTCTGCTCTGTTCTCCTTAAACATGATCCTTCCACTTCCAATCCATTACCAGACTCCAAAGCAGGTGACAATGGGAAACCCCCTGTTCAATTTTGTGTGTTCTCTGTTTATTTAAATTTTTCCTCCAACTGGTTGTAAGGTTTTTGTAAGAAAGATCGTTGAGAAGCTTTTTGTAACTGAATGTCAAGGGCAGCTCACTCGTTGCATTATATGCTTAGGACCCATCCCACCGAACAGGGTTTTCTTTATTGAAGTAACTGGTCTTTGTTTAGTTCATGTCTAGTTTAAGTTTTGTCTACAATACATTAGGATGACTTTTTGATTTAGCTCAAGGGCATCAATACAAAATTGTATGGTTCTTTTTAATGAAGGTGTTCCTCCATATCCTTTATACGAACGCTTAACGTTAGCTTTGTGGGAATCTCTCTGTTCTGGCACTTTCTGTCCAATGTATGAGAAAATGTCAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGTTGAAGCTGATTATGGATAAGGGATCTGAAATGGTACAGGTAAGTAGTAGATGTAGTTTTCTTTTTTGTAGTATCTGATAAGATCGAATTTCTCCTGCGTTAAAAGACTTTTATTTCAGCAGATGCTTAAAACTATTAACCTTGATCTTTATATCGATGAGCCTTTCTTTACGCAGCTAAAAGGTATTGTGAATTGAAAGTCAATGTTATTAGTCTAAAGCAATAGGTATGTCAAAGTTACCTAGTTTTTTGATTCACCACCTCAATGGATTGCCTTATAAATTTGTTTGTAGATGGCCAAAAAACAATTGAAGGAAAGTATGCTTTGGGCAAATACGATAGGTATTTCTTTTAACACATGTCGTCATCGTACAAAATCATTTCAAGTCTCACTTTAAATATAAGTTAGTGTGGTACCTTAACATAATT

mRNA sequence

ATGACTAAAACAACAAACTTGAGTACCCATCATCGATCTTCATCTTGTCCAGAAGGCTCTCCGTCTCCGATTATGATCAAACTCGAGGATTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCAATCATCCACTAATGGAACGCTAGACTTTGATTTGGGTCTCTCCACTGCCTTCTGCTCTGTTCTCCTTAAACATGATCCTTCCACTTCCAATCCATTACCAGACTCCAAAGCAGGTGTTCCTCCATATCCTTTATACGAACGCTTAACGTTAGCTTTGTGGGAATCTCTCTGTTCTGGCACTTTCTGTCCAATGTATGAGAAAATGTCAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGTTGAAGCTGATTATGGATAAGGGATCTGAAATGGTACAGATGCTTAAAACTATTAACCTTGATCTTTATATCGATGAGCCTTTCTTTACGCAGCTAAAAGGTATTGTGAATTGAAAGTCAATGTTATTAGTCTAAAGCAATAGGTATGTCAAAGTTACCTAGTTTTTTGATTCACCACCTCAATGGATTGCCTTATAAATTTGTTTGTAGATGGCCAAAAAACAATTGAAGGAAAGTATGCTTTGGGCAAATACGATAGGTATTTCTTTTAACACATGTCGTCATCGTACAAAATCATTTCAAGTCTCACTTTAAATATAAGTTAGTGTGGTACCTTAACATAATT

Coding sequence (CDS)

ATGACTAAAACAACAAACTTGAGTACCCATCATCGATCTTCATCTTGTCCAGAAGGCTCTCCGTCTCCGATTATGATCAAACTCGAGGATTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCAATCATCCACTAATGGAACGCTAGACTTTGATTTGGGTCTCTCCACTGCCTTCTGCTCTGTTCTCCTTAAACATGATCCTTCCACTTCCAATCCATTACCAGACTCCAAAGCAGGTGTTCCTCCATATCCTTTATACGAACGCTTAACGTTAGCTTTGTGGGAATCTCTCTGTTCTGGCACTTTCTGTCCAATGTATGAGAAAATGTCAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGTTGAAGCTGATTATGGATAAGGGATCTGAAATGGTACAGATGCTTAAAACTATTAACCTTGATCTTTATATCGATGAGCCTTTCTTTACGCAGCTAAAAGGTATTGTGAATTGA

Protein sequence

MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTINLDLYIDEPFFTQLKGIVN*

Homology

[Close]

BLAST of MELO3C022438 vs. TrEMBL
Match: A0A0A0KBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.8e-64
Identity = 122/135 (90.37%), Postives = 130/135 (96.30%), Query Frame = 1


Query: 24  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPY 83
           ++IKLEDCVQELLKFVLQSSTNGT DFDLGLS+AFCS L KHDPSTSNPLP SKAGVPPY
Sbjct: 1   MIIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPY 60

Query: 84  PLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTI 143
           PLYERL+LALWESLCSGTFCPMYEKM MKNGESSLKQKEE+WLKLIMDKGSEMVQML+T+
Sbjct: 61  PLYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTL 120

Query: 144 NLDLYIDEPFFTQLK 159
           NL+LYIDEPFFTQLK
Sbjct: 121 NLELYIDEPFFTQLK 135

[Close]

BLAST of MELO3C022438 vs. TrEMBL
Match: D7SPV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.2e-33
Identity = 78/145 (53.79%), Postives = 105/145 (72.41%), Query Frame = 1


Query: 18  EGSPSPIM--IKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPST--SNPL 77
           EG PSP    + L +CV+EL+K+ L SS NGTL+ DLGLS  +CS LLK D  T  ++  
Sbjct: 7   EGPPSPARPPVDLANCVEELVKYTLYSSVNGTLEIDLGLSKDYCSALLKDDHLTDPTSIS 66

Query: 78  PDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKG 137
            DS  GVPPYPLY+RL+ AL+ S+ SG F  +Y  M++ + +SSLKQKEE W KL++DKG
Sbjct: 67  TDSFEGVPPYPLYKRLSAALYRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKG 126

Query: 138 SEMVQMLKTINLDLYIDEPFFTQLK 159
            E+V +LKTI+ +L++ EPFF+QLK
Sbjct: 127 LELVNILKTIDFELHVQEPFFSQLK 150

[Close]

BLAST of MELO3C022438 vs. TrEMBL
Match: W9QWJ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-31
Identity = 72/138 (52.17%), Postives = 96/138 (69.57%), Query Frame = 1


Query: 26  IKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLP-----DSKAGV 85
           + L +C +ELLK+ +QS  + TL+FD+GLS  FCS LL  DP   +P P     DS  GV
Sbjct: 4   VNLRNCTEELLKYTIQSRISETLEFDIGLSEDFCSRLLNSDPC-DDPFPASHSTDSMEGV 63

Query: 86  PPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQML 145
           PP+PLY+ L  AL +S+ SGTF   Y +M M   E+SLKQKE  W KLI +KGSE V +L
Sbjct: 64  PPHPLYKHLAYALQQSMTSGTFYRTYNRMPMIGTENSLKQKEHFWQKLISEKGSEFVNVL 123

Query: 146 KTINLDLYIDEPFFTQLK 159
           +TI+L+LY++EPFF+Q+K
Sbjct: 124 RTIDLELYVEEPFFSQMK 140

[Close]

BLAST of MELO3C022438 vs. TrEMBL
Match: M5XH42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018087mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-29
Identity = 70/139 (50.36%), Postives = 97/139 (69.78%), Query Frame = 1


Query: 26  IKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPST-SNPLPDSKA-----G 85
           + L+D ++ELLKF LQS TNGTL+ DLGL    CS LLK +P+  S+P     +     G
Sbjct: 13  VNLKDTIEELLKFTLQSCTNGTLEIDLGLPKELCSRLLKPEPNDLSSPSHSDSSTGIFEG 72

Query: 86  VPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQM 145
           +PPYPLY+RL LAL ES+ SGT       +++ + ES LK+KE  W KLI++KGSE+V +
Sbjct: 73  IPPYPLYKRLALALHESMASGTLFGTCNNLTIIHQESLLKEKENEWQKLILEKGSELVNV 132

Query: 146 LKTINLDLYIDEPFFTQLK 159
           LKT+ ++L++ EPFF+QLK
Sbjct: 133 LKTVKIELHVQEPFFSQLK 151

[Close]

BLAST of MELO3C022438 vs. TrEMBL
Match: A0A067DQD7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022692mg PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-27
Identity = 70/144 (48.61%), Postives = 98/144 (68.06%), Query Frame = 1


Query: 25  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDP------STSNPLP---D 84
           M +L+DC++ELLKF L S  + TLDFDLG+S+ FC+ LL+ DP      STS       D
Sbjct: 1   MERLKDCMEELLKFTLSSHIDETLDFDLGISSKFCTNLLQDDPNDAVSPSTSFDFDSDED 60

Query: 85  SKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKG-S 144
           S  GVP YPLY+RL LAL  S+  G FC  Y+K+++ N E  L+QKEE W +LI++KG S
Sbjct: 61  SLQGVPLYPLYKRLALALCRSVNCGAFCRTYKKVALMNEECFLEQKEEEWSQLILNKGSS 120

Query: 145 EMVQMLKTINLDLYIDEPFFTQLK 159
           ++V +LK +  +L++ EPFF+ +K
Sbjct: 121 DLVDILKAVEFELHVQEPFFSFIK 144

[Close]

BLAST of MELO3C022438 vs. TAIR10
Match: AT2G43465.1 (AT2G43465.1 RNA-binding ASCH domain protein)

HSP 1 Score: 104.4 bits (259), Expect = 6.9e-23
Identity = 61/143 (42.66%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 25  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLL-----KHD----PSTSNPLPD 84
           MIK+ DC+ E++KF L       ++FD+GL+  FCS LL      HD     S+S  L  
Sbjct: 1   MIKIRDCLDEMVKFTLDYC----VEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALLH 60

Query: 85  SKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSE 144
             +GVP YPLY+ L L L +S+ SG+FC  +EK+S+      LK+KE+ W KLI  KGSE
Sbjct: 61  RFSGVPDYPLYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKGSE 120

Query: 145 MVQMLKTINLDLYIDEPFFTQLK 159
           +V  LK +  +L + EP F+ +K
Sbjct: 121 LVNALKDVFSELQVQEPLFSLMK 139

[Close]

BLAST of MELO3C022438 vs. TAIR10
Match: AT3G03320.1 (AT3G03320.1 RNA-binding ASCH domain protein)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 45/140 (32.14%), Postives = 66/140 (47.14%), Query Frame = 1


Query: 20  SPSPIMIKLEDCVQELLKFVLQSSTNGTL-DFDLGLSTAFCSVLLKHDPSTSNPLPDSKA 79
           SP    + L +C++ LL+F L+S  N ++  FDL L+  FC  LL     ++      K+
Sbjct: 6   SPGTKSVDLRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGEATDSTE-----KS 65

Query: 80  GVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQ 139
            V     Y+ L  AL E L S               E       E + KLI   G +++ 
Sbjct: 66  AV-----YKLLATALSECLAS---------------EGDKNSNLEKYSKLIHGLGYDLIN 120

Query: 140 MLKTINLDLYIDEPFFTQLK 159
           MLK +N +L++ EP+FTQLK
Sbjct: 126 MLKEVNFELHVQEPYFTQLK 120

[Close]

BLAST of MELO3C022438 vs. NCBI nr
Match: gi|659120123|ref|XP_008460026.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 9.2e-86
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS 60
           MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS
Sbjct: 1   MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS 60

Query: 61  VLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQ 120
           VLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQ
Sbjct: 61  VLLKHDPSTSNPLPDSKAGVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQ 120

Query: 121 KEEIWLKLIMDKGSEMVQMLKTINLDLYIDEPFFTQLK 159
           KEEIWLKLIMDKGSEMVQMLKTINLDLYIDEPFFTQLK
Sbjct: 121 KEEIWLKLIMDKGSEMVQMLKTINLDLYIDEPFFTQLK 158

[Close]

BLAST of MELO3C022438 vs. NCBI nr
Match: gi|778711432|ref|XP_011656730.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 2.6e-64
Identity = 122/135 (90.37%), Postives = 130/135 (96.30%), Query Frame = 1


Query: 24  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPY 83
           ++IKLEDCVQELLKFVLQSSTNGT DFDLGLS+AFCS L KHDPSTSNPLP SKAGVPPY
Sbjct: 1   MIIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPY 60

Query: 84  PLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTI 143
           PLYERL+LALWESLCSGTFCPMYEKM MKNGESSLKQKEE+WLKLIMDKGSEMVQML+T+
Sbjct: 61  PLYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTL 120

Query: 144 NLDLYIDEPFFTQLK 159
           NL+LYIDEPFFTQLK
Sbjct: 121 NLELYIDEPFFTQLK 135

[Close]

BLAST of MELO3C022438 vs. NCBI nr
Match: gi|778711443|ref|XP_011656732.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 2.6e-64
Identity = 122/135 (90.37%), Postives = 130/135 (96.30%), Query Frame = 1


Query: 24  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPY 83
           ++IKLEDCVQELLKFVLQSSTNGT DFDLGLS+AFCS L KHDPSTSNPLP SKAGVPPY
Sbjct: 1   MIIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPY 60

Query: 84  PLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTI 143
           PLYERL+LALWESLCSGTFCPMYEKM MKNGESSLKQKEE+WLKLIMDKGSEMVQML+T+
Sbjct: 61  PLYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTL 120

Query: 144 NLDLYIDEPFFTQLK 159
           NL+LYIDEPFFTQLK
Sbjct: 121 NLELYIDEPFFTQLK 135

[Close]

BLAST of MELO3C022438 vs. NCBI nr
Match: gi|778711436|ref|XP_011656731.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 105/116 (90.52%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 24  IMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPY 83
           ++IKLEDCVQELLKFVLQSSTNGT DFDLGLS+AFCS L KHDPSTSNPLP SKAGVPPY
Sbjct: 1   MIIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPY 60

Query: 84  PLYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQM 140
           PLYERL+LALWESLCSGTFCPMYEKM MKNGESSLKQKEE+WLKLIMDKGSEMVQ+
Sbjct: 61  PLYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQL 116

[Close]

BLAST of MELO3C022438 vs. NCBI nr
Match: gi|659120126|ref|XP_008460027.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X2 [Cucumis melo])

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-37
Identity = 94/154 (61.04%), Postives = 109/154 (70.78%), Query Frame = 1


Query: 1   MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS 60
           MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS
Sbjct: 1   MTKTTNLSTHHRSSSCPEGSPSPIMIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCS 60

Query: 61  VLLKHDPSTSNPLPDSKA-------GVPPYPLYERLTLALWESLCSGTFCPMYEKMSMKN 120
           VLLKHDPSTSNPLPDSKA       G      Y+RL   +   L     C ++E + ++ 
Sbjct: 61  VLLKHDPSTSNPLPDSKADGQKTIEGKYALGKYDRLEPGM---LIIFNKCLLFEILDIRR 120

Query: 121 GESSLKQKEEIWLKLIM---DKGSEMVQMLKTIN 145
             S     E   L+ I+   +  +E +Q+LK++N
Sbjct: 121 YVSFSDMLESENLQSILPGIESINEGLQILKSLN 151

The following BLAST results are available for this feature:

BLAST of MELO3C022438 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBT7_CUCSA	1.8e-64	90.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1	[more]
D7SPV8_VITVI	8.2e-33	53.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=...	[more]
W9QWJ8_9ROSA	2.0e-31	52.17	Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1	[more]
M5XH42_PRUPE	1.9e-29	50.36	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018087mg PE=4 SV=1	[more]
A0A067DQD7_CITSI	3.9e-27	48.61	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022692mg PE=4 SV=1	[more]

BLAST of MELO3C022438 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43465.1	6.9e-23	42.66	RNA-binding ASCH domain protein	[more]
AT3G03320.1	1.1e-09	32.14	RNA-binding ASCH domain protein	[more]

BLAST of MELO3C022438 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120123\|ref\|XP_008460026.1\|	9.2e-86	100.00	PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo]	[more]
gi\|778711432\|ref\|XP_011656730.1\|	2.6e-64	90.37	PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus]	[more]
gi\|778711443\|ref\|XP_011656732.1\|	2.6e-64	90.37	PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus]	[more]
gi\|778711436\|ref\|XP_011656731.1\|	1.2e-53	90.52	PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus]	[more]
gi\|659120126\|ref\|XP_008460027.1\|	7.9e-37	61.04	PREDICTED: uncharacterized protein LOC103498964 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022438T1	MELO3C022438T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34204	FAMILY NOT NAMED	coord: 18..158 score: 1.0
None	No IPR available	PANTHER	PTHR34204:SF2	RNA-BINDING ASCH DOMAIN PROTEIN	coord: 18..158 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C022438	Csa6G082020	Cucumber (Chinese Long) v2	cumeB442
MELO3C022438	Cla007023	Watermelon (97103) v1	mewmB140
MELO3C022438	ClCG06G001010	Watermelon (Charleston Gray)	mewcgB124
MELO3C022438	Cla97C06G110260	Watermelon (97103) v2	mewmbB127
MELO3C022438	Bhi12G002207	Wax gourd	mewgoB095
MELO3C022438	CSPI06G06480	Wild cucumber (PI 183967)	cpimeB433
MELO3C022438	CmaCh17G006130	Cucurbita maxima (Rimu)	cmameB317
MELO3C022438	CmoCh17G005980	Cucurbita moschata (Rifu)	cmomeB310
MELO3C022438	Lsi09G018400	Bottle gourd (USVL1VR-Ls)	lsimeB017
MELO3C022438	CsGy6G006500	Cucumber (Gy14) v2	cgybmeB379
MELO3C022438	Carg18913	Silver-seed gourd	carmeB0761
MELO3C022438	CsaV3_6G006850	Cucumber (Chinese Long) v3	cucmeB444

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022438	Cucurbita moschata (Rifu)	cmomeB804
MELO3C022438	Cucurbita pepo (Zucchini)	cpemeB003
MELO3C022438	Cucurbita pepo (Zucchini)	cpemeB288
MELO3C022438	Silver-seed gourd	carmeB0081
MELO3C022438	Wax gourd	mewgoB103
MELO3C022438	Cucumber (Gy14) v1	cgymeB586
MELO3C022438	Cucurbita maxima (Rimu)	cmameB820