ClCG06G001010 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG06G001010
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RNA-binding ASCH domain protein
Location	CG_Chr06 : 979205 .. 988092 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATTGATTCCTATCCTTATTCCCTTCCCAATTTCGTCGAACTAAACAGTGAAAAGAGAAATGTAGCGAGTTAGAACTTTGGTGCCATCATCTTCTTGTACAGAAGGCGTCTTCGATTATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTAAAAATGGAAAACTCGCTCTTTCTTTTGTGTATTCTCTGTTTATTTAAGTTTTCCCTCCAAGTGCTGTTGCAAGATTTGTAAGGCTTTAGGAAGAAAGTAGGGAAGAATCGCTGAGAAGTTTTTTATAACTGAATGTCAGGACTCACTCGTTGCATTATATGCTTAGGACCCATCCCACCAACAAGGGTTTTCTTTATTGAAGTTGTCTTCATTTAGTCCATGTCTAGTTCAAATTTTGTAATGACGTAGTCTATCAAATTTAGTATGTGATAATTTAAGGTGTATTTGAAATACATTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGGAAGAAATTAGAGTGTTTGACAACTACTCTTTAATCAATTTTTATAAAAAATATTTAAATAAAAATGAGTTTTTTGAAAAACATTGTTTTCTTAAATCAATCCAAATGGGTCCTTAATTGTTGTAGTCCAAGGGTGTCTTTGGTTCAATTTTCAAATGTTTAATTTAAAAAATAAGTCATTTTGGAAAAAGTTGGAGTGTTTGATAACCACTCAAAATAGTTTTTGAAACAATTTAAAATGTATTTTAAATAATTTTTATTAGAAGAGTTTAAATAAAAATGAATTTTTTGAAAAATATTTTTTTCTTCTATTCAATCCAAACAGGCCCTAAGATTTATATTGATTAGCTCCTGTTGTAGAAAATCCAGCTAAGGGGCAATGGGTTCTTCTTTTTTCATTTGTAGATGAACAAATCATTCAAAGGACTACACGTGTTTCAATTGCTACATTTTGAAGGTCTTTTTGTTATTATTCGCCAAGTCTCATGATACTTGATTGGAGCCCTCTTCTTTTGAGTTGGCTCCCTGTTTTGTGGGCTTCTCCTTTTTGTATGCCAATGTGTTCTTTCATTTCTTTTTTCCATTAAAAGTCCAGTTTTTTCATAGAAAAAAAAGTTGCTACATGTTGAAGGTTGGTATTTCACCATGATAGAAATTTTCACAGCAAGGGTCTAATGGTTCAATAATCCACAAGGACTAATAAAAACAACCTTAGGGAGTAGATCATACTTTAATGAAAGTACCGGGACCAAATATATTTTAGCTGGGTCAAAACCAATCCTAAAGTTGAGGATGTTGACAATTTCTGTTCTTTAATGATTTGTGGGAAAGAAAAATCCTTTCGTTAACAAACAAATTGAGCCCCCTCCTACTTCCCCTGTTCTGGTGGGAATGAGGATGAATGGAGGAAAATGGAGATGCTTACTTAAAAAAAAAACTATTTGGTTTGAAGAATATTTCATTGCCTACTCAGATTGTCAATAACTCATCAGGATGACTTTTTGATTTAGCTCAAGGGCATCAATATAAAATTGTATGGTTCTTTTTAATGAAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGGTAACCGATAGATGTAATTTTCTTTTTGTAGTAACTGATAAGATCAACTTTATCCTGCATTAAAAGACTCTTTTATTTCAGCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGGTATTGTGAATTGGAAGTCAATGTTATTAATCTAGACTCTAGAGCAATGGGTATATCCAAGTTTCGTAGTTTGTTGATTGACCACACCAATATGGATTGCCTTATAAATTTGTTTGTAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGGTATTTTTTTTTTTTTTGTCACATGTCATCATTGTACAAATTTGATGTCAACTCTCACCTTAAATATAACTAAGTTAGTGTAGTACCTTAACATATATTGTTTATTTGATCCATAACCCAACCCAACCCAAATGAGTTAATAGTCCATGCACTCTTGATTGAACTAGCTCTCCTGGTTTGCTTTATTTATTTATTTATAACAATAATAATAATAATAATAATAATAATAATATTGCCAATTCATAGTTTTGATTTCCCCCTTTTCTCTCTTGCTGCAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGTAAATTGTGTTCTTGCTTTCTATTTTGTATCCCTTTGGCTTTATTCTTTGTAACTTGGTAAACTATTGAGTATTGAAGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTAATCTCTTGTAAATCTATACAACTTTTTCTTGACTGTTTAAATAGTTAAACAAGTTTTTCCATCTTGAAAAATGTACTACTTTATAAATTATTATGCAGACTTTTGAAATTTTTATCAAAATTTAAGATGATATTTAAAGATCCATTTGATTGGTGATCTAAAAAAAGATTGTTTTATTGTATTTCTTTAATCGGAATATGCATTTGATAGCAGAACTTGTAGCAGATTTTTTAAATTTAAAGTTGGAGAACTGTATTTGTGATTGAATATTGAAAAGGTAGAAAATAGAGCGTGTGGTTGTTATCATCATTTTTTTTTTTTTTTTTTTTTTTAAATGACGCAATGAAATATGTTTTTGGTGGAGAGGTGGATATTTCTTATAAAGAGATGCTATGATTTATGAGATTAGCACAAGGCTCCATAATTTAGAAAATTTTGTTCTGTTTTTCCACAATTTAAAACTATTGAATCTGAAAACAAAGGAAATATTAAAAATGAAGTTTTAAAAATTGACTTCACTATATTACTGTTTTTGGAAATAATTGGTGAAAATAAGCATGCCAAATGCAAATTTAGGATACTTTGGGTTTTTTTCCCCCAAGAGATAAAAACAGAAACTGGTTAGATACCAAACAGTCCCCAAGTTAGAAAAGTTACTTCTTAGAACATCTTTGCAGTTATTCTTATTGCCTCAGATAGAACAGGTTAACTTGGTGAAGAGATTAATTAAGGAACCAACTTTGGTTGAGTTGCTCCTTTGATGCATTTCATTTTCTTCTCGGAATAATGATCATTGACCAGTCCATTTAATTCCACCATTTAAGCTATGACTATGACCAGCAATACTGGCCCTTTTTTTTCAACTCTGAACCAGTTTGCAACGATAAACATTTGAGAACTGAGAAAGTGGGCATAGAATATTTGAGAAAGAGAATAACAAAAGAGAAACAAACCTAAAAAGTAGTAAATAGAGATGGTGAAGTTGTTGAATTGAATCAGTGAATTTATTCATAGTGAACGATTATGTTGCATTACACATATTTTCAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGTGAGTTTTCTTTCTTTCTTAAATCCATGATGATGCACTAGCAAAATTAAGAATTTCAGCATGTAGTCAGAATTTTGGATATTTTGGACTAAATCTTGATTTGAATTAATTATCTGTCATTTCAGAGTTCTACGTAAATGCTACATGCCATTCTCCAATGTAGTAGGTCTTATAATATGAAGTTATGAACAGACTTGTAACCTTGAGGGCACAAGTTTGATATGCGGTATTGCATCTTCTTGTTTATTATAATCATATACATATGTATATATATGTATATGAAATTATTAACAGTTAGTCCTATGTGCTGTTAGTTTATCTTTGACATAAGAACTGTTTAAATAAGGAGGAATGTTGAAGTAGTATCAAAGCACGTGATGATAATGTAAGAATTTAATTCAAGAAATCCTTCAATTATATGTTGTGATTTGTGAACGCTATAAGTTCAAACTGCTGGATGTCTATACTCTTTTAAGGGTTGAAGCTTTAAGATAGTGCTAGACTATTTTTTCCAGATTTTGCAAGGAATAAGGATATAAGTAGTATAGGAATATTGGTTTTTTCCCACCAAATGTCGTTTTTGTGATTTCCTTTTATTTTTCCTGCTGTGTTTTCCTTTTCTAAATGGTCCTCGTATAGAGCAAATTTTTGTATTAACTTCCTGACATTAGTTATATAGAAGTGAGGTATCTAGTTTGTTTTGATTATCTAATTCTCTAGTCCAGGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGGTCAGATTCTGTATTCATGATGAGTTGCTTCACCTTTGCTCCCAAGCGAAAAGAGTTATAATACATGTTGCATGTGCTGTCTATTCAATTTTGTTGGTATTGAATAGCATGTTTTGACATCCAAAACAATTACTTCAAATGTTCAGAAGCTTGGATATAGTGGTTAGTGGTTACTCTGAGCATCTAAATGCATGTTTTATTTTTCAATAATCCATATTTTCAGAACTAAAATTGTATTATGATATCAAAGAGATATTGCATGGGTAATATGACTTTTCCAGAGGGCTCTCTCTCCAAGGTGCCATGATTAATGAACTAATTCCTAAAATTCTGCCTTCAACTTTGATCCCCCTATTTATAATCACCCATTCTAACAAACTACATGGTAATTATAATTGTGCCACTACTAACATTCCTTAGGCAACTGTACTCTAACAGTAGCTTTCTGGTTTTTGCTTTAAAAGATAACAATCGTGGATACAGATTACTAATATTTCATAATATTTCGAATCTCTCCATCCATTAGTGTGTATATTGTTATAAGTCAACCAAATGTGCAATAAATATCATTATGAATGTTAAGCTGCTTGTAACGAAATGTTTTGAGAGCATCATAACACATGCTTTTGAACAAAATGAAAAAGATATGATTGGATGATATTTTAGCATCTTCAAACTATCCGACAGACTAATGTGGTCAATAAATTTTCTCCAACCCTTTCTTCTTATTTGCGTTAAGTTTGCATTTATTAATTTATCACAAACTTAAGGGCTGACATGAAGATTAACTGCATATTAGATGAATGGGGCGATTAAGCCACAAGATAATTTGCTGATTCTGGTATGCTAAGAAGCACGGACATGGACATGAGACAGTCATGATGATATGCGAATTCTTTTTTTAAAAAAAAGAAAGAGAAAAATAGGACACGGACACATTGGGGATACACTCTTATTATTATTATTATTTTTAGGATAAATATAAATTTTCATAAAATACTAAATGCACTCTAGTAAAAAAGTATAAAATGTCAATCCTGAAAGAGACCAAGTAAACGAAATTTGGAAGGGTTGAATTTGGTATGTCTTAACTATTGGATGGTACTTTCAAAAAAAAAAAAAAAAAAAACCCAAAGGTTTAAGAAATGTATTAACTATTTTTCTAATCAAGCTTTTAAAGATGCACGTTTACTATTCTGTTTGTTACATATTTGTTTTTTGTGATTACTAGTCGCCCAATTATGAAAGTTAGTTTTCTTATGGATCGAGGGTAAAGGCATAAAGTTAACTCATGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAATATTGGGGTACTTTTGATGGAAATGGTGAGCAGTTTCTTTATTACTATAATTATTAATTATTTATTTTAGTTCAAGATCTATTTTTGTGAATATCAATTTCTTCTTATTATGGATTTAAAGATTTAGCATATGATAATTTGGAGGAAGATTCTCATTTGTGTGATTTCATTAATCAACTATATATGCTACCATACTCGTGAATAGAATTTTCCTGCTATATAATTCTAACTATAAATTGAAGTGTATTTTCTAATGTTCTATTCTTGATAATTGAAGTCACTGATATTCTTGCACTTATCAATTTGTTGCATTGGACAATTATCGAGCATAATGAAGTCGGCTGCAAAACTAATTGCACAATATGGATTCCATTGTTTTATTTTGCTGACCATAAAAGTCATACCTGCTTGAGTTGTGAATTCCATTAAATTTTCTTTTGTTATTTAAGCCCTGTTTGATAACCATTTCGTTTTTTAGTTTTTTGTGTTTGAAATTTATATTTCTTTCCTCCAATTTATTTACTATAGTGGTACTTTGTTCGAGGGAAGAATGGTTAGGTGCAAACAATTAGTTAGAAAAAGGGGAGATCCATAGTATATGAGAATGCATCTTTTTGGCAGCCCATTCTGGATAAGCTGATAACAAGCTTGATCGTTGGAAGAGATTCCATCTTTCAAGGGGTGGATGGCTCACACTTTGCAAATCGGTGGTGTCTCATCTTCCCACTTATTACATGTCTATCTTTCAAATGCCTTTAGATATTGGATGGAGTTGAGACGTATCTTACGTAACTTCTTTTGGGAAGGAAACAATGGAGGCAAGATTTCTCATCTTGTGCATTGGAAAATAGTTATTAGTTCTCAGTTGGATGGAGGTTTGGGTATTGGTGGTTTATCCATTCAAAATTCGACTTTGCTTGCAAAATGGAGTTAGTGCTATTTTATGGAACCTCTCTCTTTGGAAATTGTTGATTTCTAGTATTCATGGCACTGATGTATTTGATTGGCATACACTTGGAAAACATCATTCTAGTCTTCAAAGCCGATGGATCAATATATCTCAAATTTGGACATCTGTGGATTCGTTTGCTCCATTCTCCATGAAATCTAGTACAATAATCCTTTTTTGGCATCATCTTTGGGTTGGTTCTAAGGCTTTAAAAGATAAATTTCTTCGTCTTTTTCCGCTCTCCTGTTTGCCGAATGGGGCCATTAGTGATTTTTGGGATGCTACTTGTTCAACTTGGCAAATAGTCTCTAGGAGACTTTTAAAAGATGATGAAACTTCAGATTTTCCTGCTCTCATGGAAGCTCTCTCCATGGTTACAATTAGTGTGTGGGCTGATTCCAGATTTTGGAGTTTGGTTGCGTAGCAAATTAAGATCCTCTTCCCCTTTATCAAAAGGGATTTACGTGGCTTTATGGCAATCTGGTAGTCCTTTGAGGGTTGCCATTTTATCTAGGATTCTTTTGAACCGTAGCCTCAACATAGCAGATATTCTTTAGAAGAAATTGGCTACTTCGTGCCTTCAACCCTCAATTTGTTTCCTATGTCATTTGAATGTGGAAAGCTACAACCATGTGTTTCTTACCTTTTTCTTACAATTGCTAGAGCAAGCTTCTTAATTTCTTCAGATTTTCATGGGTGTTTTACTCAAGTGTCAAAAACAATGTGCTTCAGCGGCATATTTTATTTGGATTAATGCTGTAAAAGCTTTGCTATCAGGTTTATGGATGAAAAGGAACCTAAGAATTTTTTAAGAAAAGTTATGTTCTAGTTCAGATATTTTTGGTGCTCTCTTACTACAACCTTTGTCGGCTACTCTTCTCAGGACTTCAGTCTCAATTGGCCATCCTTCCTTTTCCCTTATTAGTTCAACTTTTGTTCTCTTCTCTTTATATCTATGTATTTTCTATTTTTGGAGTTTTTCTATTTACTTTTTTCTCCTCCGTGGAGTTCTGTATCATTGAGCAGTAGTCTTTCTTTTCGTTTCATCAATGAAAAATTTAAGTAAGGACAATTATCTTTATTGGTATGAGGCATTTTGGGTGAAACCAAAAGCAAAGCCATGGGTTTAGGCCCAAAGTGGACAATATCATACCAGTATGAGATAGGTGGAGGTTCCGTTGTCCTTATAAGATTACCAAAGAAAAAAAAATGTAGGTGGAATTAGTATTTATAATTTCAACTTTCAAAAACTAAAAACAAAAAGCCAAATGGTTATCAAATAGGGCCTAAATAATTCTCAAACCTTGAAGTCAAAATTCGGTTGGACCTAAGTGCACACAAATGTCTTACTCGATTATGACTAGACGTAGAAGTTTCAAAAATTACAATCATTTTTCACTTGATAGACATTTATATAGAAGTTTTATATAGAAGTTTTTTACTGTACTTGACTGATCATCCTTTGCACAATAATATCTTTTGCCAGATTCTGATAAGAACAGGCTTGCCATGAATACGATTGTTCACTTGATAGCTCATTGTTGCTGGATGAATATTCATATTGTTGCACCACATGGGGTAGTTTTTGAGATAAGGATAGCAGAAGGATACGGTGCCAGGTGGTCAAAAGATGGAAACAAGGTATCGTTATCATACAAGACTTTTTTCTTATCTATAGATCTTGGAGTAATTGATACATGCCAACTCAGTTTATTTTTGGTAATGCTACAGTTCTTCGAGGAAAGAAATGCTGGAAATAATGAATAAGACTATTTAATTAATTTTAAAGATGTAAGGGAGATTTTCTTTGAAAGGGACATAAACTTATATGAAAGGACGCATATGTTAGTTCATACGTTAGGTACTTAGTACATTAGAGAACAACACCCCAAAATCTAGCTATTGAGGTGAGAGAGCCA

mRNA sequence

CTTATTGATTCCTATCCTTATTCCCTTCCCAATTTCGTCGAACTAAACAGTGAAAAGAGAAATGTAGCGAGTTAGAACTTTGGTGCCATCATCTTCTTGTACAGAAGGCGTCTTCGATTATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGATGAATGGGGCGATTAAGCCACAAGATAATTTGCTGATTCTGTTAGTTTTCTTATGGATCGAGGGTAAAGGCATAAAGTTAACTCATGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAATATTGGGGTACTTTTGATGGAAATGATTCTGATAAGAACAGGCTTGCCATGAATACGATTGTTCACTTGATAGCTCATTGTTGCTGGATGAATATTCATATTGTTGCACCACATGGGGTAGTTTTTGAGATAAGGATAGCAGAAGGATACGGTGCCAGGTGGTCAAAAGATGGAAACAAGGTATCGTTATCATACAAGACTTTTTTCTTATCTATAGATCTTGGAGTAATTGATACATGCCAACTCAGTTTATTTTTGGTAATGCTACAGTTCTTCGAGGAAAGAAATGCTGGAAATAATGAATAAGACTATTTAATTAATTTTAAAGATGTAAGGGAGATTTTCTTTGAAAGGGACATAAACTTATATGAAAGGACGCATATGTTAGTTCATACGTTAGGTACTTAGTACATTAGAGAACAACACCCCAAAATCTAGCTATTGAGGTGAGAGAGCCA

Coding sequence (CDS)

ATGATCAACCTCGAGGACTGTGTGCAGGAGCTGCTCAAGTTTGTTCTGCACTCATCTAGTAACGGAACCCTAGACTTCGATTTGGGTCTCTGCAGTGCCTTCTGCTCTGGTCTCCTTAAACATGATCCTTCCACTTCCAATCCCTTACCAGACTCCAAAGCAGGTGTTCCTCCGTATCCTTTATACAAGCGTATAACATTAGCTTTGTGGGAAACCCTCTGTTCTGGCACTTTCTGTCCAATGTATAAGAGAATGTTAATGAAGAATGGAGAAAGTTCTTTAAAGCAGAAAGAGGAAATATGGATGAAGCTGATTATAGATAAGGGGTCTGAAATGGTTCAGATGCTTAAAACTCTTAACCTTGAACTTTATGTCGATGAGCCTTTCTTTACGCAGCTAAAAGATGGCCAAAAATCAATGGAAGGGAAGTATGCTTTGGGCAAATATGATAGACTTGAACCAGGAATGCTGATTATCTTCAATAAATGTCTTGTATTTGAAATATTGGATATCCGCCGGTATGCGTCAGTTTCTGATATGTTGGAGTCTGAAAATCTTCAAAGCATCCTGCCTGGAGTTGAAAGCATTGACGAAGGTTTGCAAATATTGAAATCTTTGAACAAAGAAGAGGAAGGAATGGCTGACAGTGTTCTTGCTATATGTATTTCAAGTGTGCCATTTCAGCCTTACATTTCTTTAGCTGCAATAATCTCAGGGCTGAGTTATGAAGGTCTTCAAGGTCTTCTCGGCTTGACACATACCATAGGAACGGTTCCTGATGTTCTTCCCCCTCCAAGATCAGCTCTTTTGTCTTCATTTGTGCTTCCATATAAACCCGAGATGAATGGGGCGATTAAGCCACAAGATAATTTGCTGATTCTGTTAGTTTTCTTATGGATCGAGGGTAAAGGCATAAAGTTAACTCATGGAGCTAAGGCATTGGCAAAGCATCATCATAGATCTAGCAGCAAATATTGGGGTACTTTTGATGGAAATGATTCTGATAAGAACAGGCTTGCCATGAATACGATTGTTCACTTGATAGCTCATTGTTGCTGGATGAATATTCATATTGTTGCACCACATGGGGTAGTTTTTGAGATAAGGATAGCAGAAGGATACGGTGCCAGGTGGTCAAAAGATGGAAACAAGGTATCGTTATCATACAAGACTTTTTTCTTATCTATAGATCTTGGAGTAATTGATACATGCCAACTCAGTTTATTTTTGGTAATGCTACAGTTCTTCGAGGAAAGAAATGCTGGAAATAATGAATAA

Protein sequence

MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLWIEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIVAPHGVVFEIRIAEGYGARWSKDGNKVSLSYKTFFLSIDLGVIDTCQLSLFLVMLQFFEERNAGNNE

Homology

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BLAST of ClCG06G001010 vs. TrEMBL
Match: A0A0A0KBT7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.9e-138
Identity = 246/280 (87.86%), Postives = 264/280 (94.29%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

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BLAST of ClCG06G001010 vs. TrEMBL
Match: W9QWJ8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 2.6e-115
Identity = 213/388 (54.90%), Postives = 276/388 (71.13%), Query Frame = 1


Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLP-----DSKAGV 61
           +NL +C +ELLK+ + S  + TL+FD+GL   FCS LL  DP   +P P     DS  GV
Sbjct: 4   VNLRNCTEELLKYTIQSRISETLEFDIGLSEDFCSRLLNSDPC-DDPFPASHSTDSMEGV 63

Query: 62  PPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQML 121
           PP+PLYK +  AL +++ SGTF   Y RM M   E+SLKQKE  W KLI +KGSE V +L
Sbjct: 64  PPHPLYKHLAYALQQSMTSGTFYRTYNRMPMIGTENSLKQKEHFWQKLISEKGSEFVNVL 123

Query: 122 KTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYAS 181
           +T++LELYV+EPFF+Q+KDG K++EG+ A GKY R++ G LI+ N+CL+FE+ D+  YAS
Sbjct: 124 RTIDLELYVEEPFFSQMKDGLKTIEGRCATGKYSRIKSGSLILLNECLLFEVQDVHWYAS 183

Query: 182 VSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAI 241
            S MLE+E L  +LPGV+SI EG++I +    +E+ M++ VLAI IS V  QPY  LAAI
Sbjct: 184 FSKMLEAEGLAEVLPGVKSIIEGVEIYRKFYTKEKEMSNGVLAISISKVDPQPYTYLAAI 243

Query: 242 ISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLV 301
           +SGL+Y G+QGLLGLT+T GT+   LPPPRSAL+SSF++PYK +                
Sbjct: 244 LSGLNYGGVQGLLGLTNTNGTIEHALPPPRSALVSSFMMPYKID---------------- 303

Query: 302 FLWIEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNI 361
               E KGI LTHGA+ALAKH HR ++KYWGT +GNDSDKNR A++ I  LI  CCW+N+
Sbjct: 304 ---AEVKGITLTHGAQALAKHAHRCTNKYWGTLNGNDSDKNRRALDVITQLITQCCWLNL 363

Query: 362 HIVAPHGVVFEIRIAEGYGARWSKDGNK 385
           HIV PHG VFEIR+A+GYGARWS DG+K
Sbjct: 364 HIVPPHGDVFEIRVADGYGARWSIDGSK 371

[Close]

BLAST of ClCG06G001010 vs. TrEMBL
Match: D7SPV8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 2.9e-114
Identity = 207/385 (53.77%), Postives = 279/385 (72.47%), Query Frame = 1


Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPST--SNPLPDSKAGVPPY 61
           ++L +CV+EL+K+ L+SS NGTL+ DLGL   +CS LLK D  T  ++   DS  GVPPY
Sbjct: 17  VDLANCVEELVKYTLYSSVNGTLEIDLGLSKDYCSALLKDDHLTDPTSISTDSFEGVPPY 76

Query: 62  PLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTL 121
           PLYKR++ AL+ ++ SG F  +Y  M + + +SSLKQKEE W KL++DKG E+V +LKT+
Sbjct: 77  PLYKRLSAALYRSIISGAFWEIYSTMALIHEDSSLKQKEE-WNKLVVDKGLELVNILKTI 136

Query: 122 NLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSD 181
           + EL+V EPFF+QLKDG K +EG+ A+G Y+R+  G LI+FNKCLV E+ D+RRYAS S 
Sbjct: 137 DFELHVQEPFFSQLKDGLKIIEGRCAVGDYNRIGSGALILFNKCLVLEVQDVRRYASFSQ 196

Query: 182 MLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISG 241
           +LESE L  +LPGV++I+EG+QI +    +E+  ++ VLAIC++    QPYI LA I+ G
Sbjct: 197 LLESEGLAEVLPGVKTIEEGVQIYRKFYTKEKERSNGVLAICVAKPAAQPYIFLAYILFG 256

Query: 242 LSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLW 301
           LSY G+Q LLG  HT+GT+P+ LPPPRS LLSSF+ P+KP +                  
Sbjct: 257 LSYGGVQRLLGFMHTVGTIPEALPPPRSTLLSSFMSPHKPNV------------------ 316

Query: 302 IEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIV 361
              +   LT GA+ALAKH +RSS K+WG FDG+DS+KN+LAM+ I  +IA+CCW+N+HIV
Sbjct: 317 ---ESCTLTDGARALAKHVNRSSQKFWGNFDGSDSNKNQLAMDAITRVIANCCWLNMHIV 376

Query: 362 APHGVVFEIRIAEGYGARWSKDGNK 385
            PHG VFEIR+A+GYGARWS+DG K
Sbjct: 377 PPHGAVFEIRVADGYGARWSQDGTK 379

[Close]

BLAST of ClCG06G001010 vs. TrEMBL
Match: A0A061EJI0_THECC (RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_019975 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.6e-107
Identity = 197/385 (51.17%), Postives = 264/385 (68.57%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNP-LPDSKAGVPPY 60
           M  L +C++ELLKF L S  N +L+F+L L   FCSGLL  DP+  NP  PD   GVP Y
Sbjct: 1   MERLGECIEELLKFTLQSHINKSLNFELRLSPEFCSGLLNSDPADPNPGPPDILKGVPSY 60

Query: 61  PLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTL 120
           PLYK + LAL++++ SG+ C     + + + E S KQKEE W KL+ +KG E++ ++  +
Sbjct: 61  PLYKHLALALYQSIVSGSICNTQHNLGLMHDEISTKQKEE-WNKLVSNKGLELINIMDNI 120

Query: 121 NLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSD 180
             EL+V EPFF+ L+DG K++EG+ A GKY+ +EPG +I+FNKCLV E+ D+ RYA+ S 
Sbjct: 121 EFELHVQEPFFSMLRDGLKTIEGRCAGGKYNNIEPGAMILFNKCLVLEVQDVHRYATFSK 180

Query: 181 MLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISG 240
           MLE+E+L  +LPGV+S +EGLQI +    EE+  ++ V AIC+S++  QP I LA+I+S 
Sbjct: 181 MLEAESLLQVLPGVKSTEEGLQIYRKFYTEEKESSNGVFAICVSNLVAQPSILLASILSE 240

Query: 241 LSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLW 300
           LSYEG+Q LL L HT GT+   LPPP+S LL SF+LPY P++ G+               
Sbjct: 241 LSYEGVQRLLALAHTPGTISGALPPPKSTLLLSFMLPYNPDVRGS--------------- 300

Query: 301 IEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIV 360
                  LTHGA+AL+KH  RSSSKYWG  +G+DS+KN LAM  I HLI +CCW+N++IV
Sbjct: 301 ------TLTHGARALSKHADRSSSKYWGNLNGSDSNKNNLAMGVITHLITNCCWLNVYIV 360

Query: 361 APHGVVFEIRIAEGYGARWSKDGNK 385
             HG VFEIR+ EGYGARWSKDG K
Sbjct: 361 QLHGAVFEIRVGEGYGARWSKDGTK 363

[Close]

BLAST of ClCG06G001010 vs. TrEMBL
Match: B9HGY8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s01640g PE=4 SV=2)

HSP 1 Score: 391.3 bits (1004), Expect = 1.5e-105
Identity = 197/384 (51.30%), Postives = 265/384 (69.01%), Query Frame = 1


Query: 8   VQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDP------STSNPLP-DSKAGVPPYP 67
           ++ELLKF L S  N TL+F+LGL   FC  LL+ DP      ST  P P DS  GV  YP
Sbjct: 21  IEELLKFTLESHINQTLEFNLGLSKDFCINLLEEDPNDMLCHSTPTPTPTDSFDGVALYP 80

Query: 68  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 127
           LYKR+  AL+ ++ SG  C  Y++M+  + +S+LKQKEE W +LI +KG E++ +L+ ++
Sbjct: 81  LYKRLASALYRSVKSGAVCRTYEKMVFGDKDSNLKQKEENWDQLIKEKGLELINVLEGIS 140

Query: 128 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 187
            E++V EP+F+ LKDG+K++EG+ A G Y R+EPG LI+ NK +V ++ D+RRYAS S M
Sbjct: 141 CEIHVQEPYFSLLKDGRKTIEGRCATGDYIRIEPGDLILVNKIVVLKVEDVRRYASFSKM 200

Query: 188 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 247
           L++ENL+ +LPGV++++EG++I +    EE+ M++ VLAIC+S +  QPY+SLA+I+ GL
Sbjct: 201 LQAENLEKVLPGVKTVEEGVKIYRKFYTEEKEMSNGVLAICVSKLAAQPYLSLASILFGL 260

Query: 248 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLWI 307
           SY G++ LLGL  T GTV + LPPPRS LLSSF+ PY P +                   
Sbjct: 261 SYGGVRSLLGLADTGGTVSNALPPPRSTLLSSFIFPYNPNI------------------- 320

Query: 308 EGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIVA 367
             KG  LTHGA+ALAKH  RS  +YWG   G+DS KNRLAMN I  +IA CCW NIH+V 
Sbjct: 321 --KGSALTHGARALAKHAERSRDRYWGILGGSDSTKNRLAMNVISRIIASCCWSNIHVVP 380

Query: 368 PHGVVFEIRIAEGYGARWSKDGNK 385
            HG VFEIR+A+GYGARWSKDG K
Sbjct: 381 QHGAVFEIRVADGYGARWSKDGTK 383

[Close]

BLAST of ClCG06G001010 vs. TAIR10
Match: AT2G43465.1 (AT2G43465.1 RNA-binding ASCH domain protein)

HSP 1 Score: 341.3 bits (874), Expect = 8.7e-94
Identity = 178/394 (45.18%), Postives = 253/394 (64.21%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLL-----KHD----PSTSNPLPD 60
           MI + DC+ E++KF L    +  ++FD+GL   FCSGLL      HD     S+S  L  
Sbjct: 1   MIKIRDCLDEMVKFTL----DYCVEFDIGLTGEFCSGLLCGESVLHDGERIESSSYALLH 60

Query: 61  SKAGVPPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSE 120
             +GVP YPLYK + L L +++ SG+FC  ++++ +      LK+KE+ W KLI  KGSE
Sbjct: 61  RFSGVPDYPLYKVLALGLLKSIDSGSFCGTFEKISLGKEVIRLKEKEDEWSKLINQKGSE 120

Query: 121 MVQMLKTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPG-MLIIFNKCLVFEILD 180
           +V  LK +  EL V EP F+ +KDG K++E +    +YDR+  G  +++ NKCL+FE+L+
Sbjct: 121 LVNALKDVFSELQVQEPLFSLMKDGIKTVEARCFEEEYDRIRRGGSMVMINKCLMFEVLE 180

Query: 181 IRRYASVSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPY 240
           + +YAS  ++L++E+ + + PG ++++EG+Q+ + L   ++   + V+AI +S    QP 
Sbjct: 181 LHQYASFYELLKAESSEKVFPGTKTVEEGMQMFRKLYDTDQENFNGVVAIHLSKSVAQPC 240

Query: 241 ISLAAIISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDN 300
           ++LA I+SGLSY G+Q LLGL+HT G++   LPPPRS LLSSF+LPYKP++         
Sbjct: 241 VALAHILSGLSYTGVQNLLGLSHTTGSIFHALPPPRSMLLSSFMLPYKPKI--------- 300

Query: 301 LLILLVFLWIEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAH 360
                       KG +L+HGA+ALAKH  RSS  +WG   G DSDKN  AM+ I   I +
Sbjct: 301 ------------KGCRLSHGARALAKHVDRSSDGFWGVLQGTDSDKNERAMDIINRFIGN 360

Query: 361 CCWMNIHIVAPHGVVFEIRIAEGYGARWSKDGNK 385
           CCWMNIHIV PHG VFEIR+A+GYGARWS+DG K
Sbjct: 361 CCWMNIHIVPPHGEVFEIRVAQGYGARWSRDGTK 369

[Close]

BLAST of ClCG06G001010 vs. TAIR10
Match: AT3G03320.1 (AT3G03320.1 RNA-binding ASCH domain protein)

HSP 1 Score: 158.3 bits (399), Expect = 1.0e-38
Identity = 94/249 (37.75%), Postives = 140/249 (56.22%), Query Frame = 1


Query: 2   INLEDCVQELLKFVLHSSSNGTL-DFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 61
           ++L +C++ LL+F L S  N ++  FDL L   FC  LL     ++      K+ V    
Sbjct: 12  VDLRECMESLLRFSLRSHLNESVPSFDLDLTRDFCLHLLGEATDSTE-----KSAV---- 71

Query: 62  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 121
            YK +  AL E L S               E       E + KLI   G +++ MLK +N
Sbjct: 72  -YKLLATALSECLAS---------------EGDKNSNLEKYSKLIHGLGYDLINMLKEVN 131

Query: 122 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 181
            EL+V EP+FTQLKDG K++EG+ A+G Y R+  G  ++FNKCL+ E+ D+ RY S S+M
Sbjct: 132 FELHVQEPYFTQLKDGLKTVEGRCAVGDYMRISSGDFLLFNKCLLLEVQDVHRYTSFSEM 191

Query: 182 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 241
           L+ E L  +LPGVESI+EG+Q+ ++   EE+   + V+AI ++    QP  +LA ++S L
Sbjct: 192 LKVEGLAKVLPGVESIEEGVQVYRNFYSEEKERMNGVVAIRVAKPANQPSAALAGVLSEL 235

Query: 242 SYEGLQGLL 250
              G++ LL
Sbjct: 252 KSSGIKSLL 235

[Close]

BLAST of ClCG06G001010 vs. NCBI nr
Match: gi|659120123|ref|XP_008460026.1| (PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo])

HSP 1 Score: 668.3 bits (1723), Expect = 8.8e-189
Identity = 327/384 (85.16%), Postives = 350/384 (91.15%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           MI LEDCVQELLKFVL SS+NGTLDFDLGL +AFCS LLKHDPSTSNPLPDSKAGVPPYP
Sbjct: 25  MIKLEDCVQELLKFVLQSSTNGTLDFDLGLSTAFCSVLLKHDPSTSNPLPDSKAGVPPYP 84

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R+TLALWE+LCSGTFCPMY++M MKNGESSLKQKEEIW+KLI+DKGSEMVQMLKT+N
Sbjct: 85  LYERLTLALWESLCSGTFCPMYEKMSMKNGESSLKQKEEIWLKLIMDKGSEMVQMLKTIN 144

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           L+LY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLIIFNKCL+FEILDIRRY S SDM
Sbjct: 145 LDLYIDEPFFTQLKDGQKTIEGKYALGKYDRLEPGMLIIFNKCLLFEILDIRRYVSFSDM 204

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPG+ESI+EGLQILKSLN+EEE M DSVLA+CIS VPFQPYISLAAIISGL
Sbjct: 205 LESENLQSILPGIESINEGLQILKSLNREEEEMGDSVLALCISRVPFQPYISLAAIISGL 264

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLWI 300
           SYEGLQGLLGL HT GTV DVLPPPRSALLSSFVLPYKP                     
Sbjct: 265 SYEGLQGLLGLAHTAGTVADVLPPPRSALLSSFVLPYKP--------------------- 324

Query: 301 EGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIVA 360
           +GKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDS+KNRLAMNTIVHLIAHCCWMNIHIVA
Sbjct: 325 KGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSEKNRLAMNTIVHLIAHCCWMNIHIVA 384

Query: 361 PHGVVFEIRIAEGYGARWSKDGNK 385
           PHG+VFEIRIA+GYGARWSKDGNK
Sbjct: 385 PHGIVFEIRIAQGYGARWSKDGNK 387

[Close]

BLAST of ClCG06G001010 vs. NCBI nr
Match: gi|778711432|ref|XP_011656730.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus])

HSP 1 Score: 657.9 bits (1696), Expect = 1.2e-185
Identity = 325/384 (84.64%), Postives = 345/384 (89.84%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLWI 300
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKP                     
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKP--------------------- 301

Query: 301 EGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIVA 360
           EGKGIKLTHGAKALAKHHHRSSSK+WGTFDGNDSDKNR AMNTIVHLIA CCWMNIHIVA
Sbjct: 302 EGKGIKLTHGAKALAKHHHRSSSKHWGTFDGNDSDKNRHAMNTIVHLIAQCCWMNIHIVA 361

Query: 361 PHGVVFEIRIAEGYGARWSKDGNK 385
           PHG+VFEIRIAEGYGARWSKDGNK
Sbjct: 362 PHGIVFEIRIAEGYGARWSKDGNK 364

[Close]

BLAST of ClCG06G001010 vs. NCBI nr
Match: gi|778711436|ref|XP_011656731.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus])

HSP 1 Score: 612.5 bits (1578), Expect = 5.8e-172
Identity = 309/384 (80.47%), Postives = 327/384 (85.16%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQ      
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQ------ 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
                       LKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 ------------LKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILLVFLWI 300
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKP                     
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKP--------------------- 301

Query: 301 EGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMNIHIVA 360
           EGKGIKLTHGAKALAKHHHRSSSK+WGTFDGNDSDKNR AMNTIVHLIA CCWMNIHIVA
Sbjct: 302 EGKGIKLTHGAKALAKHHHRSSSKHWGTFDGNDSDKNRHAMNTIVHLIAQCCWMNIHIVA 346

Query: 361 PHGVVFEIRIAEGYGARWSKDGNK 385
           PHG+VFEIRIAEGYGARWSKDGNK
Sbjct: 362 PHGIVFEIRIAEGYGARWSKDGNK 346

[Close]

BLAST of ClCG06G001010 vs. NCBI nr
Match: gi|778711443|ref|XP_011656732.1| (PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 4.2e-138
Identity = 246/280 (87.86%), Postives = 264/280 (94.29%), Query Frame = 1


Query: 1   MINLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPSTSNPLPDSKAGVPPYP 60
           +I LEDCVQELLKFVL SS+NGT DFDLGL SAFCS L KHDPSTSNPLP SKAGVPPYP
Sbjct: 2   IIKLEDCVQELLKFVLQSSTNGTPDFDLGLSSAFCSSLFKHDPSTSNPLPYSKAGVPPYP 61

Query: 61  LYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQMLKTLN 120
           LY+R++LALWE+LCSGTFCPMY++MLMKNGESSLKQKEE+W+KLI+DKGSEMVQML+TLN
Sbjct: 62  LYERLSLALWESLCSGTFCPMYEKMLMKNGESSLKQKEEMWLKLIMDKGSEMVQMLRTLN 121

Query: 121 LELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYASVSDM 180
           LELY+DEPFFTQLKDGQK++EGKYALGKYDRLEPGMLII NKCLVFEILDI RY S SDM
Sbjct: 122 LELYIDEPFFTQLKDGQKTVEGKYALGKYDRLEPGMLIIVNKCLVFEILDIHRYVSFSDM 181

Query: 181 LESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAAIISGL 240
           LESENLQSILPGVESIDEGLQILKSLN+E+E MADSVLA+CISSVPFQPYISLAAIISGL
Sbjct: 182 LESENLQSILPGVESIDEGLQILKSLNREDEEMADSVLALCISSVPFQPYISLAAIISGL 241

Query: 241 SYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPE 281
           SYEGLQGLLGL HT GTV D LPPPRSALLSSFVLPYKPE
Sbjct: 242 SYEGLQGLLGLAHTAGTVADALPPPRSALLSSFVLPYKPE 281

[Close]

BLAST of ClCG06G001010 vs. NCBI nr
Match: gi|645231486|ref|XP_008222417.1| (PREDICTED: uncharacterized protein LOC103322292 isoform X1 [Prunus mume])

HSP 1 Score: 435.3 bits (1118), Expect = 1.3e-118
Identity = 219/391 (56.01%), Postives = 279/391 (71.36%), Query Frame = 1


Query: 2   INLEDCVQELLKFVLHSSSNGTLDFDLGLCSAFCSGLLKHDPST-SNPLPDSKA-----G 61
           +NL+D ++ELLKF L S +NGTL+ DLGL   FCS LLK +P+  S+P     +     G
Sbjct: 14  VNLKDTIEELLKFTLQSCTNGTLEIDLGLPKEFCSRLLKSEPNDLSSPSHSDSSTGIFEG 73

Query: 62  VPPYPLYKRITLALWETLCSGTFCPMYKRMLMKNGESSLKQKEEIWMKLIIDKGSEMVQM 121
           VPPYPLYKR+ LAL E++ SGT         + + ESSLK+KE  W KLI +KGSE+V +
Sbjct: 74  VPPYPLYKRLALALHESIASGTLFGTCNNASIIHQESSLKEKENEWQKLISEKGSELVNV 133

Query: 122 LKTLNLELYVDEPFFTQLKDGQKSMEGKYALGKYDRLEPGMLIIFNKCLVFEILDIRRYA 181
           LKT+ +EL+V EPFF+QLKDG K++EG+ ALG   R++ G LI+FNKCL+FE+ DIR Y+
Sbjct: 134 LKTVKIELHVQEPFFSQLKDGLKTIEGRCALGNCSRIDSGSLILFNKCLLFEVQDIRSYS 193

Query: 182 SVSDMLESENLQSILPGVESIDEGLQILKSLNKEEEGMADSVLAICISSVPFQPYISLAA 241
           S SDM+E+E L  +LPGVE+I++G+QI +    EE+  ++ VLAIC+S  P QPYISLA 
Sbjct: 194 SFSDMMEAEGLSKVLPGVETIEQGVQIYRKFYTEEKERSNGVLAICVSKFPHQPYISLAR 253

Query: 242 IISGLSYEGLQGLLGLTHTIGTVPDVLPPPRSALLSSFVLPYKPEMNGAIKPQDNLLILL 301
           ++ GLS  GLQGLLGL HT G+ PD LPPP   LLSSFVLPYK  + G+           
Sbjct: 254 MLFGLSLGGLQGLLGLAHTTGSTPDALPPPTFTLLSSFVLPYKLNVEGS----------- 313

Query: 302 VFLWIEGKGIKLTHGAKALAKHHHRSSSKYWGTFDGNDSDKNRLAMNTIVHLIAHCCWMN 361
                      LTHGA+ALAKH HRSSSKYWGT  G+DS+KNRLA++ I  L+ HCCW+N
Sbjct: 314 ----------ALTHGARALAKHAHRSSSKYWGTLVGSDSNKNRLALDVISQLMTHCCWLN 373

Query: 362 IHIVAPHGVVFEIRIAEGYGARWSKDGNKVS 387
           +H V PHGVVFEIR+AEGYGARWS+DG+KVS
Sbjct: 374 VHSVQPHGVVFEIRVAEGYGARWSEDGSKVS 383

The following BLAST results are available for this feature:

BLAST of ClCG06G001010 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBT7_CUCSA	2.9e-138	87.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G082020 PE=4 SV=1	[more]
W9QWJ8_9ROSA	2.6e-115	54.90	Uncharacterized protein OS=Morus notabilis GN=L484_016164 PE=4 SV=1	[more]
D7SPV8_VITVI	2.9e-114	53.77	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0226g00060 PE=4 SV=...	[more]
A0A061EJI0_THECC	2.6e-107	51.17	RNA-binding ASCH domain protein, putative isoform 1 OS=Theobroma cacao GN=TCM_01...	[more]
B9HGY8_POPTR	1.5e-105	51.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s01640g PE=4 SV=2	[more]

BLAST of ClCG06G001010 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43465.1	8.7e-94	45.18	RNA-binding ASCH domain protein	[more]
AT3G03320.1	1.0e-38	37.75	RNA-binding ASCH domain protein	[more]

BLAST of ClCG06G001010 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120123\|ref\|XP_008460026.1\|	8.8e-189	85.16	PREDICTED: uncharacterized protein LOC103498964 isoform X1 [Cucumis melo]	[more]
gi\|778711432\|ref\|XP_011656730.1\|	1.2e-185	84.64	PREDICTED: uncharacterized protein LOC101215607 isoform X1 [Cucumis sativus]	[more]
gi\|778711436\|ref\|XP_011656731.1\|	5.8e-172	80.47	PREDICTED: uncharacterized protein LOC101215607 isoform X2 [Cucumis sativus]	[more]
gi\|778711443\|ref\|XP_011656732.1\|	4.2e-138	87.86	PREDICTED: uncharacterized protein LOC101215607 isoform X3 [Cucumis sativus]	[more]
gi\|645231486\|ref\|XP_008222417.1\|	1.3e-118	56.01	PREDICTED: uncharacterized protein LOC103322292 isoform X1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015947	PUA-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG06G001010.1	ClCG06G001010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015947	PUA-like domain	unknown	SSF88697	PUA domain-like	coord: 122..227 score: 1.27
None	No IPR available	GENE3D	G3DSA:3.10.480.10		coord: 122..224 score: 7.2
None	No IPR available	PANTHER	PTHR34204	FAMILY NOT NAMED	coord: 306..384 score: 2.2E-143coord: 1..284 score: 2.2E
None	No IPR available	PANTHER	PTHR34204:SF2	RNA-BINDING ASCH DOMAIN PROTEIN	coord: 306..384 score: 2.2E-143coord: 1..284 score: 2.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG06G001010	Csa6G082020	Cucumber (Chinese Long) v2	cuwcgB476
ClCG06G001010	MELO3C022438	Melon (DHL92) v3.5.1	mewcgB124
ClCG06G001010	Cla007023	Watermelon (97103) v1	wcgwmB345
ClCG06G001010	Cla97C06G110260	Watermelon (97103) v2	wcgwmbB273
ClCG06G001010	Bhi12G002207	Wax gourd	wcgwgoB502
ClCG06G001010	CSPI06G06480	Wild cucumber (PI 183967)	cpiwcgB503
ClCG06G001010	Cucsa.362120	Cucumber (Gy14) v1	cgywcgB620
ClCG06G001010	CmaCh17G006130	Cucurbita maxima (Rimu)	cmawcgB324
ClCG06G001010	CmoCh17G005980	Cucurbita moschata (Rifu)	cmowcgB320
ClCG06G001010	Lsi09G018400	Bottle gourd (USVL1VR-Ls)	lsiwcgB029
ClCG06G001010	CsGy6G006500	Cucumber (Gy14) v2	cgybwcgB438
ClCG06G001010	MELO3C022439.2	Melon (DHL92) v3.6.1	medwcgB119
ClCG06G001010	Carg18913	Silver-seed gourd	carwcgB0742
ClCG06G001010	CsaV3_6G006850	Cucumber (Chinese Long) v3	cucwcgB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG06G001010	Wax gourd	wcgwgoB498
ClCG06G001010	Cucurbita maxima (Rimu)	cmawcgB808
ClCG06G001010	Cucurbita moschata (Rifu)	cmowcgB803
ClCG06G001010	Cucurbita pepo (Zucchini)	cpewcgB016
ClCG06G001010	Cucurbita pepo (Zucchini)	cpewcgB302
ClCG06G001010	Silver-seed gourd	carwcgB0084