Cucsa.359350 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.359350
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPhotosynthetic NDH subcomplex B 3
Locationscaffold03588 : 297639 .. 298851 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATGTAAGTTGTAAACTTGGTAATGTCAAATTTGAGGGGTTTGTTTTGGCTTATCGAGTATGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTCAGTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATGTGAGTTTCCCCGTTCATTAACTTGTTGAGGAACCTGGGAATTTCAATTAGTTTTGATTATCGTATGGCTTTGATGTTGTTTTTCAGTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGGTGATTTTTCTGTATTAGTTCACGTTCTCAACAGGATTTAATCACTGCCCTTTTCATTTCTACTATCTGAATCATTGTTTATTTGATCATCATGGTAAATTTATTCAGTTCATGACTTAGACAAACTGACTTAGAAGTTAAAAGAGTTCAAAAGTCGGTGCTATGGCCATTGGAAAATGAAAGAAATGAAGAAGAAATTCAATCCTAATGTTCTGCTACAAGTCTTCTGACTGAAAATTTTACCGTTTCAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGGTAAGAACACCGATGCCATTGGCATTATAAGCTGAGAAACCAAAACGAGTCAATAACTATGGACACTGTCATGTAGATGTTAAGTTCATTTGAATTTTTCATTCAAATCCTTTTAACATCATGTTGTGGTTGAATCAAACGAGAGCACGAGGCGATACAATGATAGAAGTATAATGATTTTGTTTTCATGCACAGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGGTAAATAGTTGAAGCTTGATTGATGATGTTCTTGAGTAGAATAGTCTCACAGTCATCTCTTTTTCACAAAAGTTGATGAGTCTTAATTGTTTGTTTTCTTTGGATGCAGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA

mRNA sequence

AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA

Coding sequence (CDS)

AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA

Protein sequence

TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST*
Homology
[Close]
BLAST of Cucsa.359350 vs. Swiss-Prot
Match: PNSB3_ARATH (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana GN=PNSB3 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.2e-61
Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1 

Query: 3   VRAVGTVPQSQSEATD-PEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 62
           VRA+ T P SQ  A D P+EPP VD AFV+SVLLPDGTPDVH RRA GGQKLR+IMLDSN
Sbjct: 47  VRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSN 106

Query: 63  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 122
           I+LYGPYS+ L NCAG GTC TCMVEIV GKELLNPRTDIEK+KLKRKPKNWRLACQT V
Sbjct: 107 IELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNV 166

Query: 123 GKPDSRGMLVVQQLPEWKAHEW 144
           G PDS G++V+QQLPEWKAHEW
Sbjct: 167 GNPDSTGLVVIQQLPEWKAHEW 188

[Close]
BLAST of Cucsa.359350 vs. TrEMBL
Match: A0A0A0KC78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447110 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-86
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS 60
           TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS
Sbjct: 41  TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS 100

Query: 61  NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 120
           NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT
Sbjct: 101 NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 160

Query: 121 VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 158
           VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST
Sbjct: 161 VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 197

[Close]
BLAST of Cucsa.359350 vs. TrEMBL
Match: A0A061GCI5_THECC (NDH-dependent cyclic electron flow 1 isoform 1 OS=Theobroma cacao GN=TCM_028838 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 4.2e-66
Identity = 120/151 (79.47%), Postives = 136/151 (90.07%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV TV +S+S A +PEEPP VD AFV+SVLLPDGTPDVH R ACGGQKLR+IMLD+N
Sbjct: 42  RIRAVRTVLESESLAREPEEPPAVDFAFVHSVLLPDGTPDVHFRSACGGQKLRDIMLDNN 101

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           I+LYGPY+R LLNCAGGGTCGTCMVE+VEGKELL PRTD EK+KLKRKPKNWRLACQTTV
Sbjct: 102 IELYGPYARPLLNCAGGGTCGTCMVEVVEGKELLTPRTDKEKEKLKRKPKNWRLACQTTV 161

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSD 153
           GKPDSRG+LV+QQLPEWKAHEW YE +  S+
Sbjct: 162 GKPDSRGLLVIQQLPEWKAHEWTYETIAPSE 192

[Close]
BLAST of Cucsa.359350 vs. TrEMBL
Match: M5XDL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011732mg PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.9e-65
Identity = 118/155 (76.13%), Postives = 135/155 (87.10%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV T  ++ S A DPE+PP+VD AFV+SVLLPD TPDVHLR+ACGGQKLRNIMLDSN
Sbjct: 45  KIRAVSTSQENPSGAIDPEQPPLVDFAFVSSVLLPDQTPDVHLRQACGGQKLRNIMLDSN 104

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           IDLYGPY+R LLNC G GTCGTCMVE+V+GKELLNPRT  EK+ LK+KPKNWRLACQTTV
Sbjct: 105 IDLYGPYARTLLNCGGVGTCGTCMVEVVQGKELLNPRTGKEKEHLKKKPKNWRLACQTTV 164

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSES 157
           GKPDSRG++VVQQLPEWKAHEW YEE+ +  S  S
Sbjct: 165 GKPDSRGLVVVQQLPEWKAHEWRYEEILVDPSQPS 199

[Close]
BLAST of Cucsa.359350 vs. TrEMBL
Match: A9PFE5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s18740g PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 7.9e-65
Identity = 115/151 (76.16%), Postives = 135/151 (89.40%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV TVP+S SEA +PEEPP V LAFV+SVLLPDGTPDVH R A GGQKLR+IM+D+N
Sbjct: 37  KIRAVSTVPESSSEAKEPEEPPCVHLAFVHSVLLPDGTPDVHFRNAPGGQKLRDIMMDTN 96

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           I+LYGPYSR LLNC GGGTC TCMVE++EGKELL+PRTD EK+KLK+KPKNWRLACQTTV
Sbjct: 97  IELYGPYSRALLNCGGGGTCATCMVEVIEGKELLSPRTDNEKEKLKKKPKNWRLACQTTV 156

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSD 153
           G PDSRG++V+QQLPEWKAHEW YE++  S+
Sbjct: 157 GNPDSRGLVVIQQLPEWKAHEWNYEKLLFSE 187

[Close]
BLAST of Cucsa.359350 vs. TrEMBL
Match: A0A0D2UQF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G072900 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.8e-64
Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATD--PEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLD 61
           ++RAV TVP S+S A D  P+EPP VD AFV+SVLLPDGTPDVH RRACGGQKLR+IMLD
Sbjct: 38  KIRAVSTVPDSESTAKDKEPDEPPAVDFAFVHSVLLPDGTPDVHFRRACGGQKLRDIMLD 97

Query: 62  SNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQT 121
           +N++LYGPY R LLNCAGGGTCGTCMVE+VEGKELL PRTD EK+ LK+KPKNWRLACQT
Sbjct: 98  NNMELYGPYGRPLLNCAGGGTCGTCMVEVVEGKELLTPRTDKEKEHLKKKPKNWRLACQT 157

Query: 122 TVGKPDSRGMLVVQQLPEWKAHEWGYEEV 149
            VGKPDS+G+LV+QQLPEWKAHEW YE++
Sbjct: 158 IVGKPDSKGLLVIQQLPEWKAHEWSYEKI 186

[Close]
BLAST of Cucsa.359350 vs. TAIR10
Match: AT3G16250.1 (AT3G16250.1 NDH-dependent cyclic electron flow 1)

HSP 1 Score: 237.3 bits (604), Expect = 6.6e-63
Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1 

Query: 3   VRAVGTVPQSQSEATD-PEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 62
           VRA+ T P SQ  A D P+EPP VD AFV+SVLLPDGTPDVH RRA GGQKLR+IMLDSN
Sbjct: 47  VRAISTAPASQPPAADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSN 106

Query: 63  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 122
           I+LYGPYS+ L NCAG GTC TCMVEIV GKELLNPRTDIEK+KLKRKPKNWRLACQT V
Sbjct: 107 IELYGPYSKPLSNCAGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNV 166

Query: 123 GKPDSRGMLVVQQLPEWKAHEW 144
           G PDS G++V+QQLPEWKAHEW
Sbjct: 167 GNPDSTGLVVIQQLPEWKAHEW 188

[Close]
BLAST of Cucsa.359350 vs. TAIR10
Match: AT4G32590.3 (AT4G32590.3 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23
Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = 1 

Query: 12  SQSEATDPE-----EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKL-RNIMLDSNIDLY 71
           S S+A+ P+      P  ++L F       DG+  V   +A  G KL R+IM D+ I+LY
Sbjct: 40  SSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELY 99

Query: 72  GPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPD 129
             Y + ++NC GGG+CGTC+VEI++G++LLN RTD E   LK+KP++WRLACQT VG  +
Sbjct: 100 AAYGK-VMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKE 159

[Close]
BLAST of Cucsa.359350 vs. NCBI nr
Match: gi|449448008|ref|XP_004141758.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

Query: 1   TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS 60
           TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS
Sbjct: 41  TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS 100

Query: 61  NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 120
           NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT
Sbjct: 101 NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 160

Query: 121 VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 158
           VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST
Sbjct: 161 VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 197

[Close]
BLAST of Cucsa.359350 vs. NCBI nr
Match: gi|659124472|ref|XP_008462178.1| (PREDICTED: uncharacterized protein LOC103500602 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 5.4e-83
Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 1 

Query: 1   TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDS 60
           TQVRAVGTV QSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVH RRACGGQKLRNIMLDS
Sbjct: 41  TQVRAVGTVSQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDS 100

Query: 61  NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 120
           NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT
Sbjct: 101 NIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTT 160

Query: 121 VGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSES 157
           VGKPDSRGMLVVQQLPEWKAHEWGYEEV+LS+ SES
Sbjct: 161 VGKPDSRGMLVVQQLPEWKAHEWGYEEVDLSELSES 196

[Close]
BLAST of Cucsa.359350 vs. NCBI nr
Match: gi|658014654|ref|XP_008342650.1| (PREDICTED: uncharacterized protein LOC103405430 [Malus domestica])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 126/156 (80.77%), Postives = 140/156 (89.74%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV T  +SQSEA  PE+PP VD AFV+SVLLPD TPDVHLR+ACGGQKLRNIMLDSN
Sbjct: 68  KIRAVSTSQESQSEAIQPEQPPSVDFAFVSSVLLPDQTPDVHLRQACGGQKLRNIMLDSN 127

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           IDLYGPYSR LLNCAGGGTCGTCMVEIV+GKELL PRTD EK+ LK+KPKNWRLACQTTV
Sbjct: 128 IDLYGPYSRVLLNCAGGGTCGTCMVEIVQGKELLTPRTDKEKEHLKKKPKNWRLACQTTV 187

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 158
           GKPDSRG++VVQQLPEWKAHEW YEEV L D ++S+
Sbjct: 188 GKPDSRGLVVVQQLPEWKAHEWKYEEV-LVDPNQSS 222

[Close]
BLAST of Cucsa.359350 vs. NCBI nr
Match: gi|694315965|ref|XP_009377887.1| (PREDICTED: uncharacterized protein LOC103966441 [Pyrus x bretschneideri])

HSP 1 Score: 263.5 bits (672), Expect = 2.4e-67
Identity = 126/156 (80.77%), Postives = 139/156 (89.10%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV    +SQSEA  PE+PP VD AFV+SVLLPD TPDVHLR+ACGGQKLRNIMLDSN
Sbjct: 45  KIRAVSASQESQSEAIQPEQPPSVDFAFVSSVLLPDQTPDVHLRQACGGQKLRNIMLDSN 104

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           IDLYGPYSR LLNCAGGGTCGTCMVEIV+GKELL PRTD EK+ LK+KPKNWRLACQTTV
Sbjct: 105 IDLYGPYSRVLLNCAGGGTCGTCMVEIVQGKELLTPRTDKEKEHLKKKPKNWRLACQTTV 164

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 158
           GKPDSRG++VVQQLPEWKAHEW YEEV L D S+S+
Sbjct: 165 GKPDSRGLVVVQQLPEWKAHEWKYEEV-LVDPSQSS 199

[Close]
BLAST of Cucsa.359350 vs. NCBI nr
Match: gi|694325240|ref|XP_009353576.1| (PREDICTED: uncharacterized protein LOC103944839 [Pyrus x bretschneideri])

HSP 1 Score: 263.1 bits (671), Expect = 3.2e-67
Identity = 125/156 (80.13%), Postives = 139/156 (89.10%), Query Frame = 1 

Query: 2   QVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSN 61
           ++RAV T  +SQSEA  P++PP VD  FVNSVLLPD TPDVHLR+ACGGQKLRNIMLDSN
Sbjct: 71  KIRAVSTSQESQSEALQPQQPPSVDFVFVNSVLLPDQTPDVHLRQACGGQKLRNIMLDSN 130

Query: 62  IDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTV 121
           IDLYGPYSR LLNCAGGGTCGTC+VEIV+GKELL PRTD EK+ LK+KPKNWRLACQTTV
Sbjct: 131 IDLYGPYSRVLLNCAGGGTCGTCVVEIVQGKELLTPRTDKEKEHLKKKPKNWRLACQTTV 190

Query: 122 GKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST 158
           GKPDSRG++VVQQLPEWKAHEW YEEV L D S+S+
Sbjct: 191 GKPDSRGLVVVQQLPEWKAHEWKYEEV-LVDPSQSS 225

The following BLAST results are available for this feature:
BLAST of Cucsa.359350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNSB3_ARATH1.2e-6179.58Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thali... [more]
BLAST of Cucsa.359350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC78_CUCSA1.3e-86100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447110 PE=4 SV=1[more]
A0A061GCI5_THECC4.2e-6679.47NDH-dependent cyclic electron flow 1 isoform 1 OS=Theobroma cacao GN=TCM_028838 ... [more]
M5XDL1_PRUPE7.9e-6576.13Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011732mg PE=4 SV=1[more]
A9PFE5_POPTR7.9e-6576.16Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s18740g PE=2 SV=1[more]
A0A0D2UQF0_GOSRA1.8e-6477.85Uncharacterized protein OS=Gossypium raimondii GN=B456_011G072900 PE=4 SV=1[more]
BLAST of Cucsa.359350 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16250.16.6e-6379.58 NDH-dependent cyclic electron flow 1[more]
AT4G32590.31.0e-2345.53 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of Cucsa.359350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448008|ref|XP_004141758.1|1.8e-86100.00PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis ... [more]
gi|659124472|ref|XP_008462178.1|5.4e-8396.79PREDICTED: uncharacterized protein LOC103500602 [Cucumis melo][more]
gi|658014654|ref|XP_008342650.1|1.4e-6780.77PREDICTED: uncharacterized protein LOC103405430 [Malus domestica][more]
gi|694315965|ref|XP_009377887.1|2.4e-6780.77PREDICTED: uncharacterized protein LOC103966441 [Pyrus x bretschneideri][more]
gi|694325240|ref|XP_009353576.1|3.2e-6780.13PREDICTED: uncharacterized protein LOC103944839 [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.359350.1Cucsa.359350.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 73..121
score: 1.7
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 45..128
score: 9.18
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 43..123
score: 7.9
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 3..154
score: 1.3E
NoneNo IPR availablePANTHERPTHR23426:SF27SUBFAMILY NOT NAMEDcoord: 3..154
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.359350Cla015464Watermelon (97103) v1cgywmB647
Cucsa.359350Csa7G447110Cucumber (Chinese Long) v2cgycuB508
Cucsa.359350MELO3C024264Melon (DHL92) v3.5.1cgymeB579
Cucsa.359350ClCG09G001820Watermelon (Charleston Gray)cgywcgB610
Cucsa.359350CSPI07G21630Wild cucumber (PI 183967)cgycpiB535
Cucsa.359350Lsi02G028170Bottle gourd (USVL1VR-Ls)cgylsiB577
Cucsa.359350Cp4.1LG17g05590Cucurbita pepo (Zucchini)cgycpeB0938
Cucsa.359350MELO3C024264.2Melon (DHL92) v3.6.1cgymedB580
Cucsa.359350CsaV3_7G033530Cucumber (Chinese Long) v3cgycucB550
Cucsa.359350Cla97C09G163920Watermelon (97103) v2cgywmbB619
Cucsa.359350Bhi09G000152Wax gourdcgywgoB719
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.359350Cucurbita maxima (Rimu)cgycmaB0984
Cucsa.359350Cucurbita maxima (Rimu)cgycmaB0986
Cucsa.359350Cucurbita maxima (Rimu)cgycmaB0987
Cucsa.359350Cucurbita moschata (Rifu)cgycmoB0979
Cucsa.359350Cucurbita moschata (Rifu)cgycmoB0986
Cucsa.359350Cucurbita moschata (Rifu)cgycmoB0988
Cucsa.359350Cucurbita moschata (Rifu)cgycmoB0989
Cucsa.359350Melon (DHL92) v3.5.1cgymeB581
Cucsa.359350Watermelon (Charleston Gray)cgywcgB615
Cucsa.359350Watermelon (97103) v1cgywmB651
Cucsa.359350Cucurbita pepo (Zucchini)cgycpeB0936
Cucsa.359350Bottle gourd (USVL1VR-Ls)cgylsiB581
Cucsa.359350Melon (DHL92) v3.6.1cgymedB582
Cucsa.359350Silver-seed gourdcarcgyB0147
Cucsa.359350Silver-seed gourdcarcgyB0162
Cucsa.359350Silver-seed gourdcarcgyB0839
Cucsa.359350Silver-seed gourdcarcgyB1148
Cucsa.359350Cucumber (Chinese Long) v3cgycucB548
Cucsa.359350Watermelon (97103) v2cgywmbB615
Cucsa.359350Watermelon (97103) v2cgywmbB617
Cucsa.359350Wax gourdcgywgoB718