Csa7G447110 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G447110
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionFerredoxin; contains IPR012675 (Beta-grasp domain)
LocationChr7 : 17874485 .. 17876131 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTCAGCTTTGTGAAACCTTACCCATAACGATCGACGGCGACACCAGATAAGGCCACAAAGAACCACACAAACACAGCCATTATGATTTATCTTTCACCAAAACACTTCATTTCTTCAACCCTCAATTCCCCAAAATGGAGGCTCTCCATCTGGGTTCATACCATTTATTATCTTCATCCTCCTTTCGTTCCTTTAACTACATTACGAATTCCTCCCACACCCTTAAACGCTTTCGCCCTCTTACTTTCCGTAGAACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATGTAAGTTGTAAACTTGGTAATGTCAAATTTGAGGGGTTTGTTTTGGCTTATCGAGTATGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTCAGTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATGTGAGTTTCCCCGTTCATTAACTTGTTGAGGAACCTGGGAATTTCAATTAGTTTTGATTATCGTATGGCTTTGATGTTGTTTTTCAGTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGGTGATTTTTCTGTATTAGTTCACGTTCTCAACAGGATTTAATCACTGCCCTTTTCATTTCTACTATCTGAATCATTGTTTATTTGATCATCATGGTAAATTTATTCAGTTCATGACTTAGACAAACTGACTTAGAAGTTAAAAGAGTTCAAAAGTCGGTGCTATGGCCATTGGAAAATGAAAGAAATGAAGAAGAAATTCAATCCTAATGTTCTGCTACAAGTCTTCTGACTGAAAATTTTACCGTTTCAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGGTAAGAACACCGATGCCATTGGCATTATAAGCTGAGAAACCAAAACGAGTCAATAACTATGGACACTGTCATGTAGATGTTAAGTTCATTTGAATTTTTCATTCAAATCCTTTTAACATCATGTTGTGGTTGAATCAAACGAGAGCACGAGGCGATACAATGATAGAAGTATAATGATTTTGTTTTCATGCACAGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGGTAAATAGTTGAAGCTTGATTGATGATGTTCTTGAGTAGAATAGTCTCACAGTCATCTCTTTTTCACAAAAGTTGATGAGTCTTAATTGTTTGTTTTCTTTGGATGCAGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAAAATTTAACTCATTTACTCTTTTTTGACCTATCGGAGTCAGCTGTGAAGATTGAGCTATGGATATTAACTACTCATCCACTTTGGAGCCTACAAAGACAAGCTCCCTGCCTCAGTATCATCAATGTAATTATTCCTTGTCTATATTCAACAGTTCATTCTTTTTTTGGGCAATAAATTGT

mRNA sequence

ATGGAGGCTCTCCATCTGGGTTCATACCATTTATTATCTTCATCCTCCTTTCGTTCCTTTAACTACATTACGAATTCCTCCCACACCCTTAAACGCTTTCGCCCTCTTACTTTCCGTAGAACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA

Coding sequence (CDS)

ATGGAGGCTCTCCATCTGGGTTCATACCATTTATTATCTTCATCCTCCTTTCGTTCCTTTAACTACATTACGAATTCCTCCCACACCCTTAAACGCTTTCGCCCTCTTACTTTCCGTAGAACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA

Protein sequence

MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST*
Homology
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BLAST of Csa7G447110 vs. Swiss-Prot
Match: PNSB3_ARATH (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana GN=PNSB3 PE=2 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 1.7e-62
Identity = 123/188 (65.43%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 6   LGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTF---------RRTQVRAVGTVPQSQSEA 65
           +GS  L  S    S     + SH  K  +P ++         R   VRA+ T P SQ  A
Sbjct: 1   MGSVQLSGSGLVASLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPPA 60

Query: 66  TD-PEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNC 125
            D P+EPP VD AFV+SVLLPDGTPDVH RRA GGQKLR+IMLDSNI+LYGPYS+ L NC
Sbjct: 61  ADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSNC 120

Query: 126 AGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 184
           AG GTC TCMVEIV GKELLNPRTDIEK+KLKRKPKNWRLACQT VG PDS G++V+QQL
Sbjct: 121 AGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQL 180

[Close]
BLAST of Csa7G447110 vs. TrEMBL
Match: A0A0A0KC78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447110 PE=4 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 2.0e-110
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
           MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE
Sbjct: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60

Query: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
           EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEEVELSDSSEST 198
           HEWGYEEVELSDSSEST
Sbjct: 181 HEWGYEEVELSDSSEST 197

[Close]
BLAST of Csa7G447110 vs. TrEMBL
Match: W9REH7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_026246 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.4e-71
Identity = 134/197 (68.02%), Postives = 162/197 (82.23%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKR--FRPLTFRRTQ---VRAVGTVPQSQSE 60
           M A  L S  L SSS   +FNYITN+  T K+  ++PL+F RT+   +RA+ T+P S+SE
Sbjct: 1   MGAFQLSSLALYSSSVSLNFNYITNTQKTPKKTYYKPLSFSRTRGGKIRAITTIPDSESE 60

Query: 61  ATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNC 120
             + + PP VD AF +S LLPDGTPDV LRRACGGQKLR+IML++NIDLYGPYSR LLNC
Sbjct: 61  DIEADGPPSVDFAFFSSSLLPDGTPDVLLRRACGGQKLRDIMLEANIDLYGPYSRPLLNC 120

Query: 121 AGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 180
           AGGGTCGTCMVE++EGKELL+PRTD EK+KLKRKPKNWRLACQT VG+PDSRG++VVQQL
Sbjct: 121 AGGGTCGTCMVEVIEGKELLSPRTDKEKEKLKRKPKNWRLACQTKVGEPDSRGLVVVQQL 180

Query: 181 PEWKAHEWGYEEVELSD 193
           PEWK+HEW YEE++ S+
Sbjct: 181 PEWKSHEWSYEEIDPSE 197

[Close]
BLAST of Csa7G447110 vs. TrEMBL
Match: A0A061GCI5_THECC (NDH-dependent cyclic electron flow 1 isoform 1 OS=Theobroma cacao GN=TCM_028838 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 3.5e-70
Identity = 132/192 (68.75%), Postives = 155/192 (80.73%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
           M  L L ++ L + S    FN+ ++S   L   R L+  R ++RAV TV +S+S A +PE
Sbjct: 1   MGTLQLNTHGLATLSVPYKFNFTSSSHKALGLSRHLSISRGRIRAVRTVLESESLAREPE 60

Query: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
           EPP VD AFV+SVLLPDGTPDVH R ACGGQKLR+IMLD+NI+LYGPY+R LLNCAGGGT
Sbjct: 61  EPPAVDFAFVHSVLLPDGTPDVHFRSACGGQKLRDIMLDNNIELYGPYARPLLNCAGGGT 120

Query: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVE+VEGKELL PRTD EK+KLKRKPKNWRLACQTTVGKPDSRG+LV+QQLPEWKA
Sbjct: 121 CGTCMVEVVEGKELLTPRTDKEKEKLKRKPKNWRLACQTTVGKPDSRGLLVIQQLPEWKA 180

Query: 181 HEWGYEEVELSD 193
           HEW YE +  S+
Sbjct: 181 HEWTYETIAPSE 192

[Close]
BLAST of Csa7G447110 vs. TrEMBL
Match: V4SMR8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026544mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.0e-69
Identity = 126/192 (65.62%), Postives = 154/192 (80.21%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
           M +L L SY L S S   +FN  TNS  +LK +  ++F R+++RA  T+P+S S+A   E
Sbjct: 1   MGSLQLNSYRLASHSLPYNFNCTTNSHKSLKFYNRVSFSRSRIRATATIPKSDSQANAAE 60

Query: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
           EPP+V+ AFV+SVLLPDGTPD+H R ACGGQKLR+IML+SNIDLYGPY+R L NCAGGGT
Sbjct: 61  EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120

Query: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVE++EG ELL  RTD EK+KLKRKPKNWRLACQTTVG PDS G++V+QQLPEWK 
Sbjct: 121 CGTCMVEVIEGNELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180

Query: 181 HEWGYEEVELSD 193
           HEW YE++  S+
Sbjct: 181 HEWKYEKIPTSE 192

[Close]
BLAST of Csa7G447110 vs. TrEMBL
Match: D7U0F6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04010 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.9e-69
Identity = 129/188 (68.62%), Postives = 154/188 (81.91%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSH-TLKRFRPLTFRRTQVRAVGTVPQSQSEATDP 60
           M  L L SY L S S  ++F   T+ +H TLK F P +  R +++A+GT+P+SQS+AT  
Sbjct: 1   MGTLQLNSYGLSSFSLTQNF---TSKTHKTLKPFNPPSSSRPKIKAIGTIPESQSQATPS 60

Query: 61  EEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGG 120
           +EPP V+ AFVNSVLLPDGTPDVH R ACGGQKLR+IMLDSNIDLYGPY+R LLNC GGG
Sbjct: 61  DEPPSVNFAFVNSVLLPDGTPDVHFRSACGGQKLRDIMLDSNIDLYGPYARPLLNCGGGG 120

Query: 121 TCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWK 180
           TCGTC+VE++EGK+LL PRTD EK+KLKR PK WRLACQTTVGK DSRG++V+QQLPEWK
Sbjct: 121 TCGTCIVEVIEGKDLLTPRTDKEKEKLKRNPKTWRLACQTTVGKADSRGLVVIQQLPEWK 180

Query: 181 AHEWGYEE 188
           AHEW YE+
Sbjct: 181 AHEWTYEK 185

[Close]
BLAST of Csa7G447110 vs. TAIR10
Match: AT3G16250.1 (AT3G16250.1 NDH-dependent cyclic electron flow 1)

HSP 1 Score: 240.4 bits (612), Expect = 9.8e-64
Identity = 123/188 (65.43%), Postives = 136/188 (72.34%), Query Frame = 1 

Query: 6   LGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTF---------RRTQVRAVGTVPQSQSEA 65
           +GS  L  S    S     + SH  K  +P ++         R   VRA+ T P SQ  A
Sbjct: 1   MGSVQLSGSGLVASLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPPA 60

Query: 66  TD-PEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNC 125
            D P+EPP VD AFV+SVLLPDGTPDVH RRA GGQKLR+IMLDSNI+LYGPYS+ L NC
Sbjct: 61  ADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSNC 120

Query: 126 AGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 184
           AG GTC TCMVEIV GKELLNPRTDIEK+KLKRKPKNWRLACQT VG PDS G++V+QQL
Sbjct: 121 AGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQL 180

[Close]
BLAST of Csa7G447110 vs. TAIR10
Match: AT4G32590.3 (AT4G32590.3 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-24
Identity = 58/135 (42.96%), Postives = 83/135 (61.48%), Query Frame = 1 

Query: 40  RTQVRAVGTVPQSQSEATDPE-----EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKL- 99
           R +V +  +   S S+A+ P+      P  ++L F       DG+  V   +A  G KL 
Sbjct: 28  RARVISCNSSSSSSSQASSPQGISAVTPLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLL 87

Query: 100 RNIMLDSNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNW 159
           R+IM D+ I+LY  Y + ++NC GGG+CGTC+VEI++G++LLN RTD E   LK+KP++W
Sbjct: 88  RSIMQDNKIELYAAYGK-VMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESW 147

Query: 160 RLACQTTVGKPDSRG 169
           RLACQT VG  ++ G
Sbjct: 148 RLACQTIVGNKENSG 161

[Close]
BLAST of Csa7G447110 vs. NCBI nr
Match: gi|449448008|ref|XP_004141758.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 2.9e-110
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
           MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE
Sbjct: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60

Query: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
           EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEEVELSDSSEST 198
           HEWGYEEVELSDSSEST
Sbjct: 181 HEWGYEEVELSDSSEST 197

[Close]
BLAST of Csa7G447110 vs. NCBI nr
Match: gi|659124472|ref|XP_008462178.1| (PREDICTED: uncharacterized protein LOC103500602 [Cucumis melo])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 1 

Query: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60
           ME LHLGSYHL SSSSFRSFNYITNSSHTLKRFR LTFRRTQVRAVGTV QSQSEATDPE
Sbjct: 1   METLHLGSYHLSSSSSFRSFNYITNSSHTLKRFRSLTFRRTQVRAVGTVSQSQSEATDPE 60

Query: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120
           EPPIVDLAFVNSVLLPDGTPDVH RRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEEVELSDSSES 197
           HEWGYEEV+LS+ SES
Sbjct: 181 HEWGYEEVDLSELSES 196

[Close]
BLAST of Csa7G447110 vs. NCBI nr
Match: gi|1009153334|ref|XP_015894582.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 279.3 bits (713), Expect = 5.4e-72
Identity = 136/188 (72.34%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 6   LGSYHL--LSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPEEPP 65
           +GS  L  LSSS   +FNYITN+  TLK  + L F   ++RAV T+P S+SEAT+ EEPP
Sbjct: 1   MGSLQLTSLSSSLSLNFNYITNTRKTLKPSKSLRFSGAKIRAVSTIPDSESEATESEEPP 60

Query: 66  IVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGTCGT 125
            V+ AFV+SVLLPDGTPDVHLR A GGQKLR+IMLDSNIDLYGPY+R LLNCAGGGTC T
Sbjct: 61  SVNFAFVSSVLLPDGTPDVHLRTASGGQKLRDIMLDSNIDLYGPYARPLLNCAGGGTCAT 120

Query: 126 CMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEW 185
           CMVE+VEGK LL PRTD EK+KLKRKPKNWRLACQT VG+PDSRG++V+QQLPEWKAHEW
Sbjct: 121 CMVEVVEGKHLLTPRTDKEKEKLKRKPKNWRLACQTIVGQPDSRGLVVIQQLPEWKAHEW 180

Query: 186 GYEEVELS 192
            YE+V+ S
Sbjct: 181 KYEKVDPS 188

[Close]
BLAST of Csa7G447110 vs. NCBI nr
Match: gi|1009112166|ref|XP_015866850.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 279.3 bits (713), Expect = 5.4e-72
Identity = 136/188 (72.34%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 6   LGSYHL--LSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPEEPP 65
           +GS  L  LSSS   +FNYITN+  TLK  + L F   ++RAV T+P S+SEAT+ EEPP
Sbjct: 1   MGSLQLSSLSSSLSLNFNYITNTRKTLKPSKSLRFSGAKIRAVSTIPDSESEATESEEPP 60

Query: 66  IVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGTCGT 125
            V+ AFV+SVLLPDGTPDVHLR A GGQKLR+IMLDSNIDLYGPY+R LLNCAGGGTC T
Sbjct: 61  SVNFAFVSSVLLPDGTPDVHLRTASGGQKLRDIMLDSNIDLYGPYARPLLNCAGGGTCAT 120

Query: 126 CMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEW 185
           CMVE+VEGK LL PRTD EK+KLKRKPKNWRLACQT VG+PDSRG++V+QQLPEWKAHEW
Sbjct: 121 CMVEVVEGKHLLTPRTDKEKEKLKRKPKNWRLACQTIVGQPDSRGLVVIQQLPEWKAHEW 180

Query: 186 GYEEVELS 192
            YE+V+ S
Sbjct: 181 KYEKVDPS 188

[Close]
BLAST of Csa7G447110 vs. NCBI nr
Match: gi|658014654|ref|XP_008342650.1| (PREDICTED: uncharacterized protein LOC103405430 [Malus domestica])

HSP 1 Score: 278.9 bits (712), Expect = 7.0e-72
Identity = 144/200 (72.00%), Postives = 162/200 (81.00%), Query Frame = 1 

Query: 1   MEALHLGS-YHLLSSSSFRSFNY-ITNSSHTLKRFRPL-TFRRTQVRAVGTVPQSQSEAT 60
           M AL L S +    S  F   N  ITNS  TL+  +PL +F R ++RAV T  +SQSEA 
Sbjct: 24  MVALQLSSCWSSFCSLPFNLINSNITNSHSTLRPSKPLISFSRAKIRAVSTSQESQSEAI 83

Query: 61  DPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAG 120
            PE+PP VD AFV+SVLLPD TPDVHLR+ACGGQKLRNIMLDSNIDLYGPYSR LLNCAG
Sbjct: 84  QPEQPPSVDFAFVSSVLLPDQTPDVHLRQACGGQKLRNIMLDSNIDLYGPYSRVLLNCAG 143

Query: 121 GGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPE 180
           GGTCGTCMVEIV+GKELL PRTD EK+ LK+KPKNWRLACQTTVGKPDSRG++VVQQLPE
Sbjct: 144 GGTCGTCMVEIVQGKELLTPRTDKEKEHLKKKPKNWRLACQTTVGKPDSRGLVVVQQLPE 203

Query: 181 WKAHEWGYEEVELSDSSEST 198
           WKAHEW YEEV L D ++S+
Sbjct: 204 WKAHEWKYEEV-LVDPNQSS 222

The following BLAST results are available for this feature:
BLAST of Csa7G447110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PNSB3_ARATH1.7e-6265.43Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thali... [more]
BLAST of Csa7G447110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC78_CUCSA2.0e-110100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447110 PE=4 SV=1[more]
W9REH7_9ROSA2.4e-7168.02Uncharacterized protein OS=Morus notabilis GN=L484_026246 PE=4 SV=1[more]
A0A061GCI5_THECC3.5e-7068.75NDH-dependent cyclic electron flow 1 isoform 1 OS=Theobroma cacao GN=TCM_028838 ... [more]
V4SMR8_9ROSI1.0e-6965.63Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026544mg PE=4 SV=1[more]
D7U0F6_VITVI3.9e-6968.62Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04010 PE=4 SV=... [more]
BLAST of Csa7G447110 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16250.19.8e-6465.43 NDH-dependent cyclic electron flow 1[more]
AT4G32590.33.4e-2442.96 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of Csa7G447110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448008|ref|XP_004141758.1|2.9e-110100.00PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis ... [more]
gi|659124472|ref|XP_008462178.1|1.1e-10495.92PREDICTED: uncharacterized protein LOC103500602 [Cucumis melo][more]
gi|1009153334|ref|XP_015894582.1|5.4e-7272.34PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Ziz... [more]
gi|1009112166|ref|XP_015866850.1|5.4e-7272.34PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic-like [Ziz... [more]
gi|658014654|ref|XP_008342650.1|7.0e-7272.00PREDICTED: uncharacterized protein LOC103405430 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0019252 starch biosynthetic process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0046872 metal ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088535cucumber EST collection version 3.0transcribed_cluster
CU139302cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G447110.1Csa7G447110.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU139302CU139302transcribed_cluster
CU088535CU088535transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 113..161
score: 2.8
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 86..168
score: 1.89
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 83..163
score: 1.4
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 39..194
score: 2.9E
NoneNo IPR availablePANTHERPTHR23426:SF27SUBFAMILY NOT NAMEDcoord: 39..194
score: 2.9E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G447110Cla015464Watermelon (97103) v1cuwmB566
Csa7G447110MELO3C024264Melon (DHL92) v3.5.1cumeB521
Csa7G447110ClCG09G001820Watermelon (Charleston Gray)cuwcgB524
Csa7G447110Lsi02G028170Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G447110MELO3C024264.2Melon (DHL92) v3.6.1cumedB501
Csa7G447110Cla97C09G163920Watermelon (97103) v2cuwmbB570
Csa7G447110Bhi09G000152Wax gourdcuwgoB690
Csa7G447110CSPI07G21630Wild cucumber (PI 183967)cpicuB354
Csa7G447110Cucsa.359350Cucumber (Gy14) v1cgycuB508
Csa7G447110Cp4.1LG17g05590Cucurbita pepo (Zucchini)cpecuB345
Csa7G447110CsGy7G019940Cucumber (Gy14) v2cgybcuB323
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G447110Wax gourdcuwgoB660
Csa7G447110Cucurbita maxima (Rimu)cmacuB388
Csa7G447110Cucurbita maxima (Rimu)cmacuB497
Csa7G447110Cucurbita maxima (Rimu)cmacuB915
Csa7G447110Cucurbita moschata (Rifu)cmocuB072
Csa7G447110Cucurbita moschata (Rifu)cmocuB378
Csa7G447110Cucurbita moschata (Rifu)cmocuB486
Csa7G447110Cucurbita moschata (Rifu)cmocuB901
Csa7G447110Melon (DHL92) v3.5.1cumeB552
Csa7G447110Watermelon (Charleston Gray)cuwcgB564
Csa7G447110Watermelon (97103) v1cuwmB585
Csa7G447110Watermelon (97103) v1cuwmB612
Csa7G447110Cucurbita pepo (Zucchini)cpecuB161
Csa7G447110Bottle gourd (USVL1VR-Ls)culsiB532
Csa7G447110Cucumber (Gy14) v2cgybcuB154
Csa7G447110Melon (DHL92) v3.6.1cumedB529
Csa7G447110Silver-seed gourdcarcuB0143
Csa7G447110Silver-seed gourdcarcuB0130
Csa7G447110Silver-seed gourdcarcuB0763
Csa7G447110Silver-seed gourdcarcuB1041
Csa7G447110Watermelon (97103) v2cuwmbB544
Csa7G447110Watermelon (97103) v2cuwmbB548