Bhi09G000152 (gene) Wax gourd

Overview
NameBhi09G000152
Typegene
OrganismBenincasa hispida (Wax gourd)
DescriptionPhotosynthetic NDH subunit of subcomplex B 3 like
Locationchr9 : 4010587 .. 4013291 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTGTTCATTTCACTTACTCATAAGGCCATAACGATCGACGGCGACAACAGATAAGGGCACAAAGAACCACACAAAACAACCATCATGATTTACCTTTCATTGAACACTTCATTTCTTCAATCCCCAATTTCCCAAAATGGAGGCTCTCCATCTGGGTTCATATCGTTTATCATCTTCATCTTCCTTTCGCTCCTTCAACTACATTACAAGTTCCTCCCAAACCCTCAAACGCTTTCGCCCTCTAAGTTTCCGTAGAGCCCACATCAGAGCTGTTGGCACTGTTCCACAGAATCAATCTGAAACCACTGACCCTGAAGAGCCTCCGGTTGTCGATTTCGCTTTCGTTAATGTAAGTTGTAATGTCCAATTTTAGGTTTTTTTTTTTTTTTTTGGGTGGATTTCCAAGTATGATTGTGTGTTTTTTTCAGTCTGTGTTGCTTCCTGATGGAACCCCAGATGTGCACTTTCGTCGAGCATGTGGTGGGCAAAAACTTAGAAACATAATGTTGGATTCCAATATTGAGTTGTATGGACCTTATGTGAGTTTCCCAGTTCATTAACTTGATGAGACATTTGGGTTTTCAATTAGTTTTGATTATCATATGGTTTGATGTTCTTTTGCAGTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGCACCTGTGGGACTTGTATGGTGGAGGTGACTTTACTGCATTGGATCATGTTTTCAACAGGATTGGGCCTAAATGTCCGGATGACCCATCCTCAGCCCTAAATGATGAATCACTCGTCCCAAAAATAAATAAAATTTAACTTTCTGCTTAATTTAAAGCACACTATCGTGTTTTATATAGTATTACATTAGGATAAATATATCTATCATAGCCTTAACACAATGATCATGCGTATCGCGATATTCATTTTTCTCCACTCTATTGCAATATTCATGGCGAAAGCACAGCAAACCACGAGAAAAATGAATATCGTGATAGACATGGAAGTTAGGGTTATGATAGATATAGCCATCCCTAATGCTATACTACATAAAACACGGTAGTGCGCTTTGACGTAAGCAGAAGGTCATATTTCATTTATTTTTTAGGGACAGGTCATAATCATTTAGGAGATAAGAATGGGTCATCCGTATAAAAATACACTTCTATCAATACCCTTTTCATTTCCACTTTCTGAATCTTTGTTTATTTGATCATTATGGTAAAATCATTCAGTTCATGACTTGGATGTGACATAGAAGTTAACAAAGTTCAAAACTTGGTGCTATGACCATTAGAAAGTGAAACAAATGAAGAAGGAATTCATTCTTAATGTTCTGCTACAAGTCTTCTGAATGAAATGTTTACCATTTCAGATCATTGAAGGGAAAGAGTTGCTGAACTCTCGCACAGACATAGAGAAAGACAAACTTAAAAGGGTAAGAATACAGATGCCATTGGCATTAATCTGACAAATCAAAACGAGTCAATAACTATGGACACTGTCATGCAGATGTCAAGTCCATTTGTATTTTTCATTCAATTCCTTTGAACATCGTTTCGTAGCCGAATCAAACGATAGCTCGAGGATAAAAGTATAATGATTTTGTTTTCATATACAGAAACCCAAAAACTGGAGACTAGCTTGCCAGACCACTGTGGGGAAACCAGATTCCAGAGGGATGGTAATTAGTTGAAGTTTGATGGATGATGTTGTTGAATAGAACAGTCTCAGTTTCTTCTTTTCACAAAAATTGATGAGTTTATTGTTTGTTTTCTTTGGATGTAGCTTGTTGTTCAACAGTTGCCCGAGTGGAAAGCTCATGAATGGGGTTATGAAAAAGTAGAGATTTCAGAGTCATCTGAGTCTGCATAATTTAACTCTTTTATTTTATTTTTGACCCATCAGAGTCAGCTGATCAGAAGATTGAGCTATGGACATTAACTCATCCACTTTGGAGCCTACAAAGACAAGCTCCTTGCCCCATTATTCAATAGTGTAATTATTTCTTGTTTATTTAATACAGTTTGTTATTTTTTTGGGCAATAAATGGAAGATTTGGTATTTGACTATCTGTATGAGATGCAACTAACATAAGCTTGAGATATTATATTTTTTTTACTAAAACCAACCGTTCAAATCACTATTCCTTATATTATTGAATTAAAAAAAAAAAAAGAAAAAAAAGAAAAAAAAAGAAGAAAAAAAAGATTAGCATGATACAAGGAGTGAGCTTCAGTATCTCGATAATCCCTTAAACTAAAGGGAAATTGCATCGAGTAGCAAAATATACCTGTGTATTTGCAAGCGTGGCTCCAGTTTTTTAAGTTTGCATCTATAGCAAAATTCTCCTTCTTTGTTAAGAATTCCTCCACCGATGCATAACCAACATCTCCTCCTCTCTTCCCGATGTTGTCCCACCACTGCTGCTTCTTTTTCTTAAGCCCATTTTCTGCTCCTTTTTCTTCTTCCCGAAAATCGCATTCCACTGTTGCTTATTCTCCTAAGGTCATTTTCAGGCTTAGATTATCGGAGAAGAACAAATTCAAGTTGAATTAGGGTCAGAATCGGTGCAACTATAAGAGAATTTCAAAACCATGAAGGATCATATAGATCTCGATTCACACATGAAGAAGCCAATCGGAAGGAGAAGAAGCAGAGTAACAGCAGTGGATTTACGAACTTTGCTATATTTACTTAGAAGGCTCTTAAATTTAAAACACTTC

mRNA sequence

AAATCTGTTCATTTCACTTACTCATAAGGCCATAACGATCGACGGCGACAACAGATAAGGGCACAAAGAACCACACAAAACAACCATCATGATTTACCTTTCATTGAACACTTCATTTCTTCAATCCCCAATTTCCCAAAATGGAGGCTCTCCATCTGGGTTCATATCGTTTATCATCTTCATCTTCCTTTCGCTCCTTCAACTACATTACAAGTTCCTCCCAAACCCTCAAACGCTTTCGCCCTCTAAGTTTCCGTAGAGCCCACATCAGAGCTGTTGGCACTGTTCCACAGAATCAATCTGAAACCACTGACCCTGAAGAGCCTCCGGTTGTCGATTTCGCTTTCGTTAATTCTGTGTTGCTTCCTGATGGAACCCCAGATGTGCACTTTCGTCGAGCATGTGGTGGGCAAAAACTTAGAAACATAATGTTGGATTCCAATATTGAGTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGCACCTGTGGGACTTGTATGGTGGAGATCATTGAAGGGAAAGAGTTGCTGAACTCTCGCACAGACATAGAGAAAGACAAACTTAAAAGGAAACCCAAAAACTGGAGACTAGCTTGCCAGACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTTGTTGTTCAACAGTTGCCCGAGTGGAAAGCTCATGAATGGGGTTATGAAAAAGTAGAGATTTCAGAGTCATCTGAGTCTGCATAATTTAACTCTTTTATTTTATTTTTGACCCATCAGAGTCAGCTGATCAGAAGATTGAGCTATGGACATTAACTCATCCACTTTGGAGCCTACAAAGACAAGCTCCTTGCCCCATTATTCAATAGTGCTTAGATTATCGGAGAAGAACAAATTCAAGTTGAATTAGGGTCAGAATCGGTGCAACTATAAGAGAATTTCAAAACCATGAAGGATCATATAGATCTCGATTCACACATGAAGAAGCCAATCGGAAGGAGAAGAAGCAGAGTAACAGCAGTGGATTTACGAACTTTGCTATATTTACTTAGAAGGCTCTTAAATTTAAAACACTTC

Coding sequence (CDS)

ATGGAGGCTCTCCATCTGGGTTCATATCGTTTATCATCTTCATCTTCCTTTCGCTCCTTCAACTACATTACAAGTTCCTCCCAAACCCTCAAACGCTTTCGCCCTCTAAGTTTCCGTAGAGCCCACATCAGAGCTGTTGGCACTGTTCCACAGAATCAATCTGAAACCACTGACCCTGAAGAGCCTCCGGTTGTCGATTTCGCTTTCGTTAATTCTGTGTTGCTTCCTGATGGAACCCCAGATGTGCACTTTCGTCGAGCATGTGGTGGGCAAAAACTTAGAAACATAATGTTGGATTCCAATATTGAGTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGCACCTGTGGGACTTGTATGGTGGAGATCATTGAAGGGAAAGAGTTGCTGAACTCTCGCACAGACATAGAGAAAGACAAACTTAAAAGGAAACCCAAAAACTGGAGACTAGCTTGCCAGACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTTGTTGTTCAACAGTTGCCCGAGTGGAAAGCTCATGAATGGGGTTATGAAAAAGTAGAGATTTCAGAGTCATCTGAGTCTGCATAA

Protein sequence

MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPEEPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGTCGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEWGYEKVEISESSESA
Homology
[Close]
BLAST of Bhi09G000152 vs. Swiss-Prot
Match: sp|Q9LU21|PNSB3_ARATH (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB3 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 6.0e-63
Identity = 125/192 (65.10%), Postives = 141/192 (73.44%), Query Frame = 0 

Query: 6   LGSYRLSSSSSFRSFNYITSSSQTLKRFRPLS--FRRAH-------IRAVGTVPQNQSET 65
           +GS +LS S    S     S S   K  +P S  FR  H       +RA+ T P +Q   
Sbjct: 1   MGSVQLSGSGLVASLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPPA 60

Query: 66  TD-PEEPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNC 125
            D P+EPP VDFAFV+SVLLPDGTPDVH+RRA GGQKLR+IMLDSNIELYGPYS+ L NC
Sbjct: 61  ADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSNC 120

Query: 126 AGGGTCGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 185
           AG GTC TCMVEI+ GKELLN RTDIEK+KLKRKPKNWRLACQT VG PDS G++V+QQL
Sbjct: 121 AGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQL 180

Query: 186 PEWKAHEWGYEK 188
           PEWKAHEW   K
Sbjct: 181 PEWKAHEWNIPK 192

[Close]
BLAST of Bhi09G000152 vs. TAIR10
Match: AT3G16250.1 (NDH-dependent cyclic electron flow 1)

HSP 1 Score: 241.9 bits (616), Expect = 3.3e-64
Identity = 125/192 (65.10%), Postives = 141/192 (73.44%), Query Frame = 0 

Query: 6   LGSYRLSSSSSFRSFNYITSSSQTLKRFRPLS--FRRAH-------IRAVGTVPQNQSET 65
           +GS +LS S    S     S S   K  +P S  FR  H       +RA+ T P +Q   
Sbjct: 1   MGSVQLSGSGLVASLPPNHSFSHKTKLNKPNSYFFRSKHNAARTKTVRAISTAPASQPPA 60

Query: 66  TD-PEEPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNC 125
            D P+EPP VDFAFV+SVLLPDGTPDVH+RRA GGQKLR+IMLDSNIELYGPYS+ L NC
Sbjct: 61  ADEPDEPPAVDFAFVHSVLLPDGTPDVHWRRANGGQKLRDIMLDSNIELYGPYSKPLSNC 120

Query: 126 AGGGTCGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQL 185
           AG GTC TCMVEI+ GKELLN RTDIEK+KLKRKPKNWRLACQT VG PDS G++V+QQL
Sbjct: 121 AGVGTCATCMVEIVNGKELLNPRTDIEKEKLKRKPKNWRLACQTNVGNPDSTGLVVIQQL 180

Query: 186 PEWKAHEWGYEK 188
           PEWKAHEW   K
Sbjct: 181 PEWKAHEWNIPK 192

[Close]
BLAST of Bhi09G000152 vs. TAIR10
Match: AT4G32590.3 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 108.2 bits (269), Expect = 5.8e-24
Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 0 

Query: 50  PQNQSETTDPEEPPVVDFAFVNSVLLPDGTPDVHFRRACGGQK-LRNIMLDSNIELYGPY 109
           PQ  S  T    P  ++  F       DG+  V   +A  G K LR+IM D+ IELY  Y
Sbjct: 47  PQGISAVT----PLEIELEFFGPKPGSDGSYPVDKAKAVSGDKLLRSIMQDNKIELYAAY 106

Query: 110 SRFLLNCAGGGTCGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRG 169
            + ++NC GGG+CGTC+VEI++G++LLN RTD E   LK+KP++WRLACQT VG  ++ G
Sbjct: 107 GK-VMNCGGGGSCGTCIVEILDGRDLLNERTDTENRYLKKKPESWRLACQTIVGNKENSG 161

[Close]
BLAST of Bhi09G000152 vs. TrEMBL
Match: tr|A0A0A0KC78|A0A0A0KC78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447110 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.0e-99
Identity = 177/196 (90.31%), Postives = 187/196 (95.41%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           MEALHLGSY L SSSSFRSFNYIT+SS TLKRFRPL+FRR  +RAVGTVPQ+QSE TDPE
Sbjct: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VD AFVNSVLLPDGTPDVH RRACGGQKLRNIMLDSNI+LYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSES 197
           HEWGYE+VE+S+SSES
Sbjct: 181 HEWGYEEVELSDSSES 196

[Close]
BLAST of Bhi09G000152 vs. TrEMBL
Match: tr|A0A1S3CGA8|A0A1S3CGA8_CUCME (photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500602 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 176/197 (89.34%), Postives = 186/197 (94.42%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           ME LHLGSY LSSSSSFRSFNYIT+SS TLKRFR L+FRR  +RAVGTV Q+QSE TDPE
Sbjct: 1   METLHLGSYHLSSSSSFRSFNYITNSSHTLKRFRSLTFRRTQVRAVGTVSQSQSEATDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VD AFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNI+LYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSESA 198
           HEWGYE+V++SE SESA
Sbjct: 181 HEWGYEEVDLSELSESA 197

[Close]
BLAST of Bhi09G000152 vs. TrEMBL
Match: tr|A0A2N9IWM7|A0A2N9IWM7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56860 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 6.0e-76
Identity = 138/192 (71.88%), Postives = 160/192 (83.33%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           M  L L SY LSS S+  +FNYIT+S + LK  +  SF R  IRAVGT+P+NQS++TDPE
Sbjct: 1   MGTLQLSSYALSSFSTSLNFNYITNSHKALKTSKHPSFSRGKIRAVGTIPENQSQSTDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP V FAFV+SVLLPDGTPDVHFR+ACGG+KLR IMLDSN+ELYGPY+R LLNC GGG 
Sbjct: 61  EPPFVAFAFVSSVLLPDGTPDVHFRKACGGEKLRQIMLDSNVELYGPYARPLLNCGGGGN 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEII+GKELL  RTD EK+KL++KPKNWRLACQTTVGK DSRG++V+QQLPEWK 
Sbjct: 121 CGTCMVEIIQGKELLTPRTDKEKEKLRKKPKNWRLACQTTVGKKDSRGLVVIQQLPEWKG 180

Query: 181 HEWGYEKVEISE 193
           HEW YE +  SE
Sbjct: 181 HEWNYETISPSE 192

[Close]
BLAST of Bhi09G000152 vs. TrEMBL
Match: tr|A0A2P4GPB1|A0A2P4GPB1_QUESU (Photosynthetic ndh subunit of subcomplex b 3, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_40898 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 3.9e-75
Identity = 139/192 (72.40%), Postives = 157/192 (81.77%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           M  L L SY LSS S+  +FNYIT+S +TLK  +   F R  IRAVGT+P+N+S++TDPE
Sbjct: 1   MGTLQLSSYALSSFSTSLNFNYITNSHKTLKTSKHPRFSRGKIRAVGTIPENESQSTDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP V  AFV+SVLLPDGTPDVHFR+ACGGQKLRNIMLDSNIELYGPY R LLNCAGGGT
Sbjct: 61  EPPFVALAFVSSVLLPDGTPDVHFRKACGGQKLRNIMLDSNIELYGPYGRPLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           C TCMVEI++GKELL  RTD EK+KLK+KPKNWRLACQ TVGK DS G+LVVQQLPEWK 
Sbjct: 121 CATCMVEIVQGKELLTPRTDKEKEKLKKKPKNWRLACQLTVGKKDSTGLLVVQQLPEWKG 180

Query: 181 HEWGYEKVEISE 193
           HEW YE +   E
Sbjct: 181 HEWNYETISPEE 192

[Close]
BLAST of Bhi09G000152 vs. TrEMBL
Match: tr|V4SMR8|V4SMR8_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026544mg PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 9.0e-72
Identity = 132/192 (68.75%), Postives = 158/192 (82.29%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           M +L L SYRL+S S   +FN  T+S ++LK +  +SF R+ IRA  T+P++ S+    E
Sbjct: 1   MGSLQLNSYRLASHSLPYNFNCTTNSHKSLKFYNRVSFSRSRIRATATIPKSDSQANAAE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPPVV+FAFV+SVLLPDGTPD+HFR ACGGQKLR+IML+SNI+LYGPY+R L NCAGGGT
Sbjct: 61  EPPVVNFAFVHSVLLPDGTPDIHFRTACGGQKLRDIMLNSNIDLYGPYARPLSNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVE+IEG ELL SRTD EK+KLKRKPKNWRLACQTTVG PDS G++V+QQLPEWK 
Sbjct: 121 CGTCMVEVIEGNELLGSRTDKEKEKLKRKPKNWRLACQTTVGTPDSTGLVVIQQLPEWKG 180

Query: 181 HEWGYEKVEISE 193
           HEW YEK+  SE
Sbjct: 181 HEWKYEKIPTSE 192

[Close]
BLAST of Bhi09G000152 vs. NCBI nr
Match: XP_022145222.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Momordica charantia])

HSP 1 Score: 380.9 bits (977), Expect = 2.5e-102
Identity = 183/197 (92.89%), Postives = 191/197 (96.95%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           MEA HLGSYRLSSSSS RSFNYIT+S+ TLKR RPL+FRRA IRAVGTVPQ+QSETTDPE
Sbjct: 1   MEAYHLGSYRLSSSSSLRSFNYITNSTHTLKRLRPLNFRRAKIRAVGTVPQSQSETTDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSESA 198
           HEWGYEKVE+SESSES+
Sbjct: 181 HEWGYEKVELSESSESS 197

[Close]
BLAST of Bhi09G000152 vs. NCBI nr
Match: XP_004141758.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis sativus] >KGN45396.1 hypothetical protein Csa_7G447110 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 1.5e-99
Identity = 177/196 (90.31%), Postives = 187/196 (95.41%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           MEALHLGSY L SSSSFRSFNYIT+SS TLKRFRPL+FRR  +RAVGTVPQ+QSE TDPE
Sbjct: 1   MEALHLGSYHLLSSSSFRSFNYITNSSHTLKRFRPLTFRRTQVRAVGTVPQSQSEATDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VD AFVNSVLLPDGTPDVH RRACGGQKLRNIMLDSNI+LYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSES 197
           HEWGYE+VE+S+SSES
Sbjct: 181 HEWGYEEVELSDSSES 196

[Close]
BLAST of Bhi09G000152 vs. NCBI nr
Match: XP_008462178.1 (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis melo])

HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98
Identity = 176/197 (89.34%), Postives = 186/197 (94.42%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           ME LHLGSY LSSSSSFRSFNYIT+SS TLKRFR L+FRR  +RAVGTV Q+QSE TDPE
Sbjct: 1   METLHLGSYHLSSSSSFRSFNYITNSSHTLKRFRSLTFRRTQVRAVGTVSQSQSEATDPE 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VD AFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNI+LYGPYSRFLLNCAGGGT
Sbjct: 61  EPPIVDLAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSESA 198
           HEWGYE+V++SE SESA
Sbjct: 181 HEWGYEEVDLSELSESA 197

[Close]
BLAST of Bhi09G000152 vs. NCBI nr
Match: XP_022964207.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucurbita moschata] >XP_023000397.1 photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucurbita maxima] >XP_023514199.1 photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355.1 bits (910), Expect = 1.5e-94
Identity = 169/197 (85.79%), Postives = 185/197 (93.91%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           MEALHLG      SSSFRSFNYIT+S+ TL RFRPL+FRR+ IRAVGTVPQ+QS+T++P+
Sbjct: 1   MEALHLG------SSSFRSFNYITNSTHTLNRFRPLTFRRSKIRAVGTVPQSQSDTSEPQ 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP+VDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSN+ELYGPYSRFLLNCAGGGT
Sbjct: 61  EPPMVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNVELYGPYSRFLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVEI+EGKELLN RTDIEKDKLK+KPKNWRLACQT VGKPDSRGM+ VQQLPEWKA
Sbjct: 121 CGTCMVEIVEGKELLNPRTDIEKDKLKKKPKNWRLACQTIVGKPDSRGMVAVQQLPEWKA 180

Query: 181 HEWGYEKVEISESSESA 198
           HEWGYEKVE+SESSES+
Sbjct: 181 HEWGYEKVELSESSESS 191

[Close]
BLAST of Bhi09G000152 vs. NCBI nr
Match: XP_022724754.1 (photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Durio zibethinus])

HSP 1 Score: 290.8 bits (743), Expect = 3.5e-75
Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 0 

Query: 1   MEALHLGSYRLSSSSSFRSFNYITSSSQTLKRFRPLSFRRAHIRAVGTVPQNQSETTDPE 60
           M  +HL ++ L++ S    FN+ +SS++ L   R  SF R  IRA+ TVP+++S   +P+
Sbjct: 1   MGTIHLNTHSLTTLSEPCKFNFTSSSNKVLTLSRHFSFPRGKIRALSTVPESESVAKEPD 60

Query: 61  EPPVVDFAFVNSVLLPDGTPDVHFRRACGGQKLRNIMLDSNIELYGPYSRFLLNCAGGGT 120
           EPP VDFAFV+SVLLPDGTPDVHFRRACGGQKLR+IMLD+NIELYGPY+R LLNCAGGGT
Sbjct: 61  EPPAVDFAFVHSVLLPDGTPDVHFRRACGGQKLRDIMLDNNIELYGPYARPLLNCAGGGT 120

Query: 121 CGTCMVEIIEGKELLNSRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKA 180
           CGTCMVE++EGKELLN RT+ EK+KLKRKPKNWRLACQTTVGKPDSRGMLV+QQLPEWKA
Sbjct: 121 CGTCMVEVVEGKELLNPRTNKEKEKLKRKPKNWRLACQTTVGKPDSRGMLVIQQLPEWKA 180

Query: 181 HEWGYEKVEISE 193
           HEW YEK+  SE
Sbjct: 181 HEWTYEKIAPSE 192

The following BLAST results are available for this feature:
BLAST of Bhi09G000152 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LU21|PNSB3_ARATH6.0e-6365.10Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thali... [more]
BLAST of Bhi09G000152 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G16250.13.3e-6465.10NDH-dependent cyclic electron flow 1[more]
AT4G32590.35.8e-2446.672Fe-2S ferredoxin-like superfamily protein[more]
BLAST of Bhi09G000152 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KC78|A0A0A0KC78_CUCSA1.0e-9990.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447110 PE=4 SV=1[more]
tr|A0A1S3CGA8|A0A1S3CGA8_CUCME1.1e-9889.34photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Cucumis melo OX=3... [more]
tr|A0A2N9IWM7|A0A2N9IWM7_FAGSY6.0e-7671.88Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56860 PE=4 SV=1[more]
tr|A0A2P4GPB1|A0A2P4GPB1_QUESU3.9e-7572.40Photosynthetic ndh subunit of subcomplex b 3, chloroplastic OS=Quercus suber OX=... [more]
tr|V4SMR8|V4SMR8_9ROSI9.0e-7268.75Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10026544mg PE=4 ... [more]
BLAST of Bhi09G000152 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022145222.12.5e-10292.89photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Momordica charantia... [more]
XP_004141758.11.5e-9990.31PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis ... [more]
XP_008462178.11.7e-9889.34PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis ... [more]
XP_022964207.11.5e-9485.79photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucurbita moschata]... [more]
XP_022724754.13.5e-7571.35photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Durio zibethinus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0051536iron-sulfur cluster binding
GO:0009055electron carrier activity
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009773 photosynthetic electron transport in photosystem I
biological_process GO:0030003 cellular cation homeostasis
biological_process GO:0070838 divalent metal ion transport
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi09M000152Bhi09M000152mRNA


InterPro
Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3DG3DSA:3.10.20.30coord: 78..183
e-value: 7.3E-19
score: 69.5
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 113..161
e-value: 3.9E-10
score: 39.4
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 90..161
e-value: 5.5902E-8
score: 46.6192
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 4..193
NoneNo IPR availablePANTHERPTHR23426:SF27PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 3, CHLOROPLASTICcoord: 4..193
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 83..168

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Bhi09G000152Csa7G447110Cucumber (Chinese Long) v2cuwgoB690
Bhi09G000152MELO3C024264Melon (DHL92) v3.5.1mewgoB239
Bhi09G000152ClCG09G001820Watermelon (Charleston Gray)wcgwgoB068
Bhi09G000152CSPI07G21630Wild cucumber (PI 183967)cpiwgoB702
Bhi09G000152Cucsa.359350Cucumber (Gy14) v1cgywgoB719
Bhi09G000152Lsi02G028170Bottle gourd (USVL1VR-Ls)lsiwgoB270
Bhi09G000152Cp4.1LG17g05590Cucurbita pepo (Zucchini)cpewgoB0422
Bhi09G000152CsGy7G019940Cucumber (Gy14) v2cgybwgoB659
Bhi09G000152MELO3C024264.2Melon (DHL92) v3.6.1medwgoB240
Bhi09G000152CsaV3_7G033530Cucumber (Chinese Long) v3cucwgoB715
Bhi09G000152Cla015464Watermelon (97103) v1wgowmB585
Bhi09G000152Cla97C09G163920Watermelon (97103) v2wgowmbB614
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Bhi09G000152Wax gourdwgowgoB065
Bhi09G000152Cucumber (Gy14) v2cgybwgoB339
Bhi09G000152Cucurbita maxima (Rimu)cmawgoB0492
Bhi09G000152Cucurbita maxima (Rimu)cmawgoB0628
Bhi09G000152Cucurbita maxima (Rimu)cmawgoB1120
Bhi09G000152Cucurbita moschata (Rifu)cmowgoB0491
Bhi09G000152Cucurbita moschata (Rifu)cmowgoB0626
Bhi09G000152Cucurbita moschata (Rifu)cmowgoB1119
Bhi09G000152Cucurbita pepo (Zucchini)cpewgoB0208
Bhi09G000152Bottle gourd (USVL1VR-Ls)lsiwgoB578
Bhi09G000152Melon (DHL92) v3.6.1medwgoB433
Bhi09G000152Melon (DHL92) v3.5.1mewgoB432
Bhi09G000152Watermelon (Charleston Gray)wcgwgoB602
Bhi09G000152Watermelon (97103) v2wgowmbB596
Bhi09G000152Watermelon (97103) v1wgowmB615
Bhi09G000152Silver-seed gourdcarwgoB0149
Bhi09G000152Silver-seed gourdcarwgoB0883
Bhi09G000152Silver-seed gourdcarwgoB1204