Cucsa.359350.1 (mRNA) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATGTAAGTTGTAAACTTGGTAATGTCAAATTTGAGGGGTTTGTTTTGGCTTATCGAGTATGGTTTTGTGTGTGTGTGTGTGTGTGTGTGTTTTTTCAGTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATGTGAGTTTCCCCGTTCATTAACTTGTTGAGGAACCTGGGAATTTCAATTAGTTTTGATTATCGTATGGCTTTGATGTTGTTTTTCAGTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGGTGATTTTTCTGTATTAGTTCACGTTCTCAACAGGATTTAATCACTGCCCTTTTCATTTCTACTATCTGAATCATTGTTTATTTGATCATCATGGTAAATTTATTCAGTTCATGACTTAGACAAACTGACTTAGAAGTTAAAAGAGTTCAAAAGTCGGTGCTATGGCCATTGGAAAATGAAAGAAATGAAGAAGAAATTCAATCCTAATGTTCTGCTACAAGTCTTCTGACTGAAAATTTTACCGTTTCAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGGTAAGAACACCGATGCCATTGGCATTATAAGCTGAGAAACCAAAACGAGTCAATAACTATGGACACTGTCATGTAGATGTTAAGTTCATTTGAATTTTTCATTCAAATCCTTTTAACATCATGTTGTGGTTGAATCAAACGAGAGCACGAGGCGATACAATGATAGAAGTATAATGATTTTGTTTTCATGCACAGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGGTAAATAGTTGAAGCTTGATTGATGATGTTCTTGAGTAGAATAGTCTCACAGTCATCTCTTTTTCACAAAAGTTGATGAGTCTTAATTGTTTGTTTTCTTTGGATGCAGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA AACCCAAGTTAGAGCTGTTGGCACTGTTCCCCAGAGTCAATCTGAAGCCACTGACCCTGAGGAGCCTCCGATTGTTGATTTGGCTTTTGTTAATTCTGTGCTGCTTCCTGATGGAACTCCAGATGTGCACTTACGTCGAGCATGTGGTGGGCAAAAGCTTAGAAACATAATGTTGGATTCTAATATTGACTTGTATGGACCTTATTCGAGATTTCTGTTGAACTGTGCTGGTGGAGGAACCTGTGGGACTTGTATGGTGGAGATTGTTGAAGGGAAAGAGCTACTGAATCCTCGAACAGACATAGAGAAAGACAAACTCAAAAGGAAACCTAAAAACTGGAGACTAGCTTGTCAAACCACTGTGGGGAAACCAGATTCCAGAGGGATGCTCGTTGTTCAACAGTTGCCTGAGTGGAAAGCTCATGAATGGGGCTATGAAGAAGTAGAGCTTTCAGACTCATCTGAGTCTACATAA TQVRAVGTVPQSQSEATDPEEPPIVDLAFVNSVLLPDGTPDVHLRRACGGQKLRNIMLDSNIDLYGPYSRFLLNCAGGGTCGTCMVEIVEGKELLNPRTDIEKDKLKRKPKNWRLACQTTVGKPDSRGMLVVQQLPEWKAHEWGYEEVELSDSSEST*
BLAST of Cucsa.359350.1 vs. Swiss-Prot
Match: PNSB3_ARATH (Photosynthetic NDH subunit of subcomplex B 3, chloroplastic OS=Arabidopsis thaliana GN=PNSB3 PE=2 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.2e-61 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TrEMBL
Match: A0A0A0KC78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447110 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 1.3e-86 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TrEMBL
Match: A0A061GCI5_THECC (NDH-dependent cyclic electron flow 1 isoform 1 OS=Theobroma cacao GN=TCM_028838 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 4.2e-66 Identity = 120/151 (79.47%), Postives = 136/151 (90.07%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TrEMBL
Match: M5XDL1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011732mg PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 7.9e-65 Identity = 118/155 (76.13%), Postives = 135/155 (87.10%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TrEMBL
Match: A9PFE5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s18740g PE=2 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 7.9e-65 Identity = 115/151 (76.16%), Postives = 135/151 (89.40%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TrEMBL
Match: A0A0D2UQF0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G072900 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 1.8e-64 Identity = 116/149 (77.85%), Postives = 133/149 (89.26%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TAIR10
Match: AT3G16250.1 (AT3G16250.1 NDH-dependent cyclic electron flow 1) HSP 1 Score: 237.3 bits (604), Expect = 6.6e-63 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. TAIR10
Match: AT4G32590.3 (AT4G32590.3 2Fe-2S ferredoxin-like superfamily protein) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-23 Identity = 56/123 (45.53%), Postives = 80/123 (65.04%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. NCBI nr
Match: gi|449448008|ref|XP_004141758.1| (PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 1.8e-86 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. NCBI nr
Match: gi|659124472|ref|XP_008462178.1| (PREDICTED: uncharacterized protein LOC103500602 [Cucumis melo]) HSP 1 Score: 315.5 bits (807), Expect = 5.4e-83 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. NCBI nr
Match: gi|658014654|ref|XP_008342650.1| (PREDICTED: uncharacterized protein LOC103405430 [Malus domestica]) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67 Identity = 126/156 (80.77%), Postives = 140/156 (89.74%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. NCBI nr
Match: gi|694315965|ref|XP_009377887.1| (PREDICTED: uncharacterized protein LOC103966441 [Pyrus x bretschneideri]) HSP 1 Score: 263.5 bits (672), Expect = 2.4e-67 Identity = 126/156 (80.77%), Postives = 139/156 (89.10%), Query Frame = 1
BLAST of Cucsa.359350.1 vs. NCBI nr
Match: gi|694325240|ref|XP_009353576.1| (PREDICTED: uncharacterized protein LOC103944839 [Pyrus x bretschneideri]) HSP 1 Score: 263.1 bits (671), Expect = 3.2e-67 Identity = 125/156 (80.13%), Postives = 139/156 (89.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
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