Cucsa.348890 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.348890
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	scaffold03487 : 298737 .. 301681 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAAAaGGTTGTTTTTCCGTGAGGGGACACCGACCTTTTTtATTGGTATCTTCCATTGCCAATCTCCTCATCATCTTCATCCACTTCTTCCTCCTCATAAACAATCAAATATCTTCTAAAACTCAACTAAATCCTAATTATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCACGGGAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTTTCTTTCTCCACCACCACTGCTTCTCTTAGCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTGAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTTAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTGAGGAAGAGGAGGAGGAGGAGGATCGAGAGATTGATGGGAAGGAAGAGGAAGATGGTTTGGGGAATTTTAGCATTGACGCTGCCATTGTAACTCCGGAGGTTAGGGCTATGGAACAAGCTTGGAGTAGAGTGGGTGCTGGTGGTGATGGGATGGGATTTGTGGGTGATTTACGGAAAGAGATGTACCTGGCTAGAGGGCTCGGCATCGGAGGAGGACCGGGTGATGGTGGCGGTGGTGGTCGACTGCAGGGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTATGCAGAGTTCTTGTACCAGGCAAGTTCGTTTTACCCTTGTTTCCATTTCTCTACTATGCTATGAATTTTTTAGGCCAAACGGTAAACATTTTGGTTAGAATAACCATCACTCTTTTATTATAAATCTTCAATTCAGTCCTTTTGTTTTCCAAATTTATAGTAAAAAAaCAACAATACAAAAAGAAGATTTTTACAAAAATCAGCATTCAAAATTGGACAATTGATAGTACTAAAGAGCAAAACTGAAGAACTTCAAAGGAAAAGAAATGAAATTATATTTTATTTAACTTTTCAAAAAAAaTTAATGTTGTTCTATCAACCACCATAAATTGTACTAAAAAACAATCATTCAACGTGGAGTTTGTTATAATAGTTTGCACATACACATTATAGTATGTTAAGGGTAGACTATTTTAGTATAGGTTAAAAAGTTGAAGAGATTTTTCAAACAATTGAGAACTTCAATACCGATTCCGATTCCAATTCCAATTCCGCCCTTTCATATGGTCATAATTAGCGAGACAATCTAAAGGAATTTCTTTGCATATGATTTTGATCGCAGAGGAAAGGAGACCTGGGAAGAGCAGAAGAATATTACAGCAGAGCTATTTTAATGGATTCCCACGATGGAGAAACTTTGTCAAAATATGCCAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTTCAAAGGGCTCTGCAAGCTTCTCCACTTGACAGGTACTCACTTCCCACCTTCATTCTATCTTTTCCCTCTTTACTATTTCACAACTAAGTCATCAACGGTAAATATACACAAACAACCTTGACTAGTGGTTTAAAGCACTTATTCTTTTGTTTAATATTCATGTGCACTGGTTGAACATGTATCAGACACTTGTTAGAGTAACAAATGTGTTAAACATGCATAGAATTTTCGTCAAGTAGATTAGAAAGATGAATAATACTAACTTTGTGTAAATACATTAAGCTAGGTTTTTTAAGCATATAAATGCATCAGAATGTCTAGATTTTTAAAACATGATGAGTCTTGTGTCCATGCCATGTCAGCTTAGATGGAGACTAGGTCAACAAGATATTAGTATAAACTGAATCCCTATGGTATAGCGCTTTTACTGTGTTAAGAATGAGAATAATAAGAAAGAAATGTTTGAGGAGGAAGATGCTATAATTTGATGCAAAAAAaTTTACATTGTGTGAATCTTTCAGCCACGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGAATGAAGATGAACAAAGCTTAGTTAAAGAGACAGCAACTAAAACTTACACGGCAGCAGCAACTGCTTGAGATGAAAGTGAATGGCAATGGCAACTTCTTTTTCTTGTTTCCTTCTTTGTAGAATAATCTCATCATCATTGATAATAAACATTGCTGCAACATTTTCAAATTTGTTCCAAGTTTCTGAAATGCAATGTTAGTGAAGAAACAAACAAGAATAAACAGAGGCAGTAGGGTGAAAGCAAACAAGTTTAAGTATAAGATTTAATGAAAAGGATAATTATCTCTCAAGTCTATTTCCCTCACATTGCCTAACAAGTGCTTGTACTTGAAATGCCAAAATTTCCCCACTTGAATTGCATCTTAAAAACCATCCAAGGGGgAAAAGTACCATCTTATCTTAATAATTAATTCCTCACAAATTAACATTTCCAGTAATGTCAACTCACACGCTCAAAAACACAAACTACAAACCAATTCCTAAACCACTCAACACCGGAGACGCTGCTTTTTCTCTGAACCATCAAACGTAGTAACCACCTTCCATATCAAAAACTCTTCCAAAGTTTCATCTCCATAATGGTTATAAACAAACTGGTACTGATTGATTGATGATACTATTGAACCTTGTGGTAACCCCGCTGAGGGAAACCGTTGCCTCTCAACCGACCATAGTCACTTCCGTCCTGGCTGCTTCCTCGACCCAAACTACGAGAACCAAATCGTCCTCTGGGGGCATCTGACTGGTAACTACCTCTCGCTCTGCCTCTTCCTGTTCATGGCA

mRNA sequence

AAGGAAAAAGGTTGTTTTTCCGTGAGGGGACACCGACCTTTTTTATTGGTATCTTCCATTGCCAATCTCCTCATCATCTTCATCCACTTCTTCCTCCTCATAAACAATCAAATATCTTCTAAAACTCAACTAAATCCTAATTATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCACGGGAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTTTCTTTCTCCACCACCACTGCTTCTCTTAGCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTGAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTTAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTgaggaagaggaggaggaggaggaTCGAGAGATTGATGGGAAGGAAGAGGAAGATGGTTTGGGGAATTTTAGCATTGACGCTGCCATTGTAACTCCGGAGGTTAGGGCTATGGAACAAGCTTGGAGTAGAGTGGGTGCTGGTGGTGATGGGATGGGATTTGTGGGTGATTTACGGAAAGAGATGTACCTGGCTAGAGGGCTCGGCATCGGAGGAGGACCGGGTGATGGTGGCGGTGGTGGTCGACTGCAGGGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTATGCAGAGTTCTTGTACCAGAGGAAAGGAGACCTGGGAAGAGCAGAAGAATATTACAGCAGAGCTATTTTAATGGATTCCCACGATGGAGAAACTTTGTCAAAATATGCCAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTTCAAAGGGCTCTGCAAGCTTCTCCACTTGACAGCCACGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGAATGAAGATGAACAAAGCTTAGTTAAAGAGACAGCAACTAAAACTTACACGGCAGCAGCAACTGCTTGAGATGAAAGTGAATGGCAATGGCAACTTCTTTTTCTTGTTTCCTTCTTTGTAGAATAATCTCATCATCATTGATAATAAACATTGCTGCAACATTTTCAAATTTGTTCCAAGTTTCTGAAATGCAATGTTAGTGAAGAAACAAACAAGAATAAACAGAGGCAGTAGGGTGAAAGCAAACAAGTTTAAGTATAAGATTTAATGAAAAGGATAATTATCTCTCAAGTCTATTTCCCTCACATTGCCTAACAAGTGCTTGTACTTGAAATGCCAAAATTTCCCCACTTGAATTGCATCTTAAAAACCATCCAAGGGGGAAAAGTACCATCTTATCTTAATAATTAATTCCTCACAAATTAACATTTCCAGTAATGTCAACTCACACGCTCAAAAACACAAACTACAAACCAATTCCTAAACCACTCAACACCGGAGACGCTGCTTTTTCTCTGAACCATCAAACGTAGTAACCACCTTCCATATCAAAAACTCTTCCAAAGTTTCATCTCCATAATGGTTATAAACAAACTGGTACTGATTGATTGATGATACTATTGAACCTTGTGGTAACCCCGCTGAGGGAAACCGTTGCCTCTCAACCGACCATAGTCACTTCCGTCCTGGCTGCTTCCTCGACCCAAACTACGAGAACCAAATCGTCCTCTGGGGGCATCTGACTGGTAACTACCTCTCGCTCTGCCTCTTCCTGTTCATGGCA

Coding sequence (CDS)

ATGCTCCTCAAATCCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCCCCGGATCACCACCACCATGACCTCCACGGGAAACACTCCCCTTCCACTTTCCCTTTCCACTGCAATAATAAACCGCTTTCTTTCTCCACCACCACTGCTTCTCTTAGCTCCTCCCCTGCTTTCTCCGACCACCATCGTGCCGCTGCTCCATCTGGCTTCCGGAGAACCAACTCTGAAGGGAATTTGAATACTGTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGATCCGTTTTCTTTTGATTCTGTCAATTTCAAATCTTCTAAGAAGTTTTGTCATGGCCTTAAACGCTCTATTCTCCAGACTATTCCCTCGTTTTCCTTCTACGGTTCTAGAGCTAGGACTGAGGAAGAGGAGGAGGAGGAGGATCGAGAGATTGATGGGAAGGAAGAGGAAGATGGTTTGGGGAATTTTAGCATTGACGCTGCCATTGTAACTCCGGAGGTTAGGGCTATGGAACAAGCTTGGAGTAGAGTGGGTGCTGGTGGTGATGGGATGGGATTTGTGGGTGATTTACGGAAAGAGATGTACCTGGCTAGAGGGCTCGGCATCGGAGGAGGACCGGGTGATGGTGGCGGTGGTGGTCGACTGCAGGGTGGAGGCGGCGGTGGGGGAGGAGGTGAAGAATATGGCATGGAGGAGTATTACAAGAAAATGGTGGTGGAGAATCCGAGCAATGCTCTTGTTTTAAGTAACTATGCAGAGTTCTTGTACCAGAGGAAAGGAGACCTGGGAAGAGCAGAAGAATATTACAGCAGAGCTATTTTAATGGATTCCCACGATGGAGAAACTTTGTCAAAATATGCCAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTTCAAAGGGCTCTGCAAGCTTCTCCACTTGACAGCCACGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGAATGAAGATGAACAAAGCTTAGTTAAAGAGACAGCAACTAAAACTTACACGGCAGCAGCAACTGCTTGA

Protein sequence

MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATKTYTAAATA*

Homology

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BLAST of Cucsa.348890 vs. Swiss-Prot
Match: FOXD1_CHICK (Forkhead box protein D1 OS=Gallus gallus GN=FOXD1 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.8e-09
Identity = 50/140 (35.71%), Postives = 65/140 (46.43%), Query Frame = 1


Query: 129 RARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGGDGMGF-VG 188
           R+  E+EEEEE+      EEE+  G+   DA +    VRA        G GG G G   G
Sbjct: 43  RSYAEDEEEEEE------EEEEDAGDLHDDALLPRSPVRAGGGGGGGGGGGGAGGGDGPG 102

Query: 189 DLRKEM----YLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKM------V 248
             R         A   G GG  G GGGGG   GGGGGGGGG+   ++  Y  +      +
Sbjct: 103 GSRPPSRGGPQKAAAAGGGGAGGGGGGGGGAGGGGGGGGGGKNSLVKPPYSYIALITMAI 162

Query: 249 VENPSNALVLSNYAEFLYQR 258
           +++P   L LS   EF+  R
Sbjct: 163 LQSPKKRLTLSEICEFISGR 176

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BLAST of Cucsa.348890 vs. TrEMBL
Match: A0A0A0KA70_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088010 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 7.9e-182
Identity = 313/315 (99.37%), Postives = 314/315 (99.68%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180
           PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG
Sbjct: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180

Query: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240
           DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN
Sbjct: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240

Query: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300
           PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL
Sbjct: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300

Query: 301 SYFQRALQASPLDSH 316
           SYFQRALQASPLD +
Sbjct: 301 SYFQRALQASPLDRY 315

[Close]

BLAST of Cucsa.348890 vs. TrEMBL
Match: A0A061DPH6_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_003908 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.0e-72
Identity = 185/381 (48.56%), Postives = 231/381 (60.63%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLL------PPDHHHHDLHG--KHSPSTFPFHCNNKPLSFS------- 60
           MLL+SSSTPLLGSLL      P +++H++     +H PST  FH N+  +SF        
Sbjct: 31  MLLRSSSTPLLGSLLSSITDSPSNNNHYETSTPIRHYPST-SFHHNHNRISFHPSPGSLH 90

Query: 61  -TTTASLSSSPA-------FSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSF 120
            +TT S  SSP        FSD  R     GFRR  SEGNL  + HA+   D +ED +  
Sbjct: 91  LSTTVSCGSSPISPSVVHQFSDFDR----QGFRRAQSEGNLEGLVHAA--CDTNEDFY-- 150

Query: 121 DSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEE---EDREIDGKEEEDGL-- 180
              N    KK     +R +LQTIPSFSFY S AR EEEE+E   E+ E + KE E+ L  
Sbjct: 151 ---NHNQPKKLSARHQRLMLQTIPSFSFYNSNARCEEEEDESDLEEEEEELKENEELLDS 210

Query: 181 ---------GN-----FSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARG 240
                    GN     F ++  ++  EV+   ++W+ VG   +G G VG+   +M+LARG
Sbjct: 211 GEERVTAMNGNLEFNAFRMENILLNEEVKG--KSWN-VGFEDEG-GLVGE---KMFLARG 270

Query: 241 L--------GIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNY 300
           L        G+ GG G GGGGG     G GG G   +G+EE+Y++MV ENP N L L NY
Sbjct: 271 LSTDGGSAGGVSGGSG-GGGGGEFNPAGSGGDGANNHGVEEHYRRMVEENPGNPLFLGNY 330

Query: 301 AEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQAS 332
           A+FLYQ K DL  AEEYYSRAIL D  DGETLS+YAKLVWELHHDQ++A SYF+RA+QAS
Sbjct: 331 AQFLYQSKKDLEAAEEYYSRAILADPKDGETLSQYAKLVWELHHDQERASSYFERAVQAS 390

[Close]

BLAST of Cucsa.348890 vs. TrEMBL
Match: A0A061DWD9_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_003908 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.0e-72
Identity = 185/381 (48.56%), Postives = 231/381 (60.63%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLL------PPDHHHHDLHG--KHSPSTFPFHCNNKPLSFS------- 60
           MLL+SSSTPLLGSLL      P +++H++     +H PST  FH N+  +SF        
Sbjct: 1   MLLRSSSTPLLGSLLSSITDSPSNNNHYETSTPIRHYPST-SFHHNHNRISFHPSPGSLH 60

Query: 61  -TTTASLSSSPA-------FSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSF 120
            +TT S  SSP        FSD  R     GFRR  SEGNL  + HA+   D +ED +  
Sbjct: 61  LSTTVSCGSSPISPSVVHQFSDFDR----QGFRRAQSEGNLEGLVHAA--CDTNEDFY-- 120

Query: 121 DSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEE---EDREIDGKEEEDGL-- 180
              N    KK     +R +LQTIPSFSFY S AR EEEE+E   E+ E + KE E+ L  
Sbjct: 121 ---NHNQPKKLSARHQRLMLQTIPSFSFYNSNARCEEEEDESDLEEEEEELKENEELLDS 180

Query: 181 ---------GN-----FSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARG 240
                    GN     F ++  ++  EV+   ++W+ VG   +G G VG+   +M+LARG
Sbjct: 181 GEERVTAMNGNLEFNAFRMENILLNEEVKG--KSWN-VGFEDEG-GLVGE---KMFLARG 240

Query: 241 L--------GIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNY 300
           L        G+ GG G GGGGG     G GG G   +G+EE+Y++MV ENP N L L NY
Sbjct: 241 LSTDGGSAGGVSGGSG-GGGGGEFNPAGSGGDGANNHGVEEHYRRMVEENPGNPLFLGNY 300

Query: 301 AEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQAS 332
           A+FLYQ K DL  AEEYYSRAIL D  DGETLS+YAKLVWELHHDQ++A SYF+RA+QAS
Sbjct: 301 AQFLYQSKKDLEAAEEYYSRAILADPKDGETLSQYAKLVWELHHDQERASSYFERAVQAS 360

[Close]

BLAST of Cucsa.348890 vs. TrEMBL
Match: A0A0D2M2D7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237800 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.5e-68
Identity = 175/389 (44.99%), Postives = 224/389 (57.58%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPP--------DHHHHDLHG--KHSPST-FPFHCNNKPLSFSTTTA 60
           MLL+SSSTP+LGSL+          ++H+++     +H PS+ F  H ++  LSF  +  
Sbjct: 1   MLLRSSSTPVLGSLVSSIAADSPSNNNHYYETSSPFRHYPSSSFHGHTHHNRLSFHPSPG 60

Query: 61  SLSSS-----------PAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFD 120
           S+  S           P+  D        GFRR  SEGNL  ++HA+   D +++ +  +
Sbjct: 61  SVHLSTVVYCGSSPVSPSVVDQFSDFELKGFRRAQSEGNLEGLAHAA--CDGNDEFYERN 120

Query: 121 SVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEEEDREIDGKEEEDGL------ 180
                S++   H  K  +LQTIPSFSFY S AR EEE+EEE+ E D +EEE+ L      
Sbjct: 121 QPKKFSAR---HNNKCLMLQTIPSFSFYKSGARCEEEDEEEEEESDFEEEEEVLNENEER 180

Query: 181 -----GNFSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIG----G 240
                G+   +A I    +   EQ    VG G           +EM+L RGLGIG    G
Sbjct: 181 LMAASGSHGFNA-ISMENILLKEQVKEYVGVG-----------QEMFLPRGLGIGTTTDG 240

Query: 241 GPGDGGGGGRLQGGGGGGG----------GGEEYGMEEYYKKMVVENPSNALVLSNYAEF 300
           G   G GGG   GGGGGGG          GG+ + +EEYYK+MV ENP N L L NYA F
Sbjct: 241 GISGGSGGGWGGGGGGGGGEFNSGGKNGDGGDNHEVEEYYKRMVEENPGNPLFLGNYARF 300

Query: 301 LYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLD 343
           LYQ K DL  AEEYYSRAIL+D  DGETLS+YAKLVWELH D+++A SYF+RA+Q SP D
Sbjct: 301 LYQSKRDLQGAEEYYSRAILVDPKDGETLSQYAKLVWELHRDEERASSYFERAVQVSPQD 360

[Close]

BLAST of Cucsa.348890 vs. TrEMBL
Match: A0A0B0NB65_GOSAR (Beta-lactamase hcpB OS=Gossypium arboreum GN=F383_16008 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.9e-67
Identity = 169/386 (43.78%), Postives = 220/386 (56.99%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPP--------DHHHHDLHG--KHSPST-FPFHCNNKPLSFSTTTA 60
           MLL+SSSTP+LGSL+          ++H+++     +H PS+ F  H ++  LSF  +  
Sbjct: 1   MLLRSSSTPVLGSLVSSIAADSPSNNNHYYETSSPFRHYPSSSFHGHTHHNRLSFHPSPG 60

Query: 61  SLSSSPAFSDHHRAAAPS-----------GFRRTNSEGNLNTVSHASDVIDVHEDPFSFD 120
           S+  S   S      +PS           GFRR  SEGNL  ++HA+   D +++ +  +
Sbjct: 61  SVHLSTVVSCGSSPVSPSVVDQFSDFELTGFRRAQSEGNLEGLAHAA--CDGNDEFYERN 120

Query: 121 SVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSID 180
                S++   H  K  +LQTIPSFSFY S AR EEE++EE+   D +EE++ L      
Sbjct: 121 QPKKFSAR---HNKKCLMLQTIPSFSFYKSGARCEEEDDEEEGS-DFEEEKEVLNENEER 180

Query: 181 AAIVT----------PEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIG------ 240
              V+            +   EQ    VG G           +EM+L RGLGIG      
Sbjct: 181 VMAVSGSHGFNPISMENILLKEQVKEYVGVG-----------QEMFLPRGLGIGTTTDGG 240

Query: 241 ------GGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYQ 300
                 GG G GGGGG    GG  G GG+ + +EEYYK+MV ENP N L L NYA+FLYQ
Sbjct: 241 ISGGSGGGWGGGGGGGEFNSGGKNGDGGDNHEVEEYYKRMVEENPGNPLFLGNYAQFLYQ 300

Query: 301 RKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSHV 343
            K DL  AEEYYSRAIL+D  DGETLS+YAKLVWELH D+++A SYF+RA+Q SP DSHV
Sbjct: 301 SKRDLQGAEEYYSRAILVDPKDGETLSQYAKLVWELHRDEERASSYFERAVQVSPQDSHV 360

[Close]

BLAST of Cucsa.348890 vs. TAIR10
Match: AT1G80130.1 (AT1G80130.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.9e-33
Identity = 69/144 (47.92%), Postives = 101/144 (70.14%), Query Frame = 1


Query: 202 GGGPGDGGGGGRLQGGGGG-GGGGEEYGMEE-----YYKKMVVENPSNALVLSNYAEFLY 261
           GGG G GG GG +  GGGG GG G + G  E     YY++M+  NP N+L+  NYA+FL 
Sbjct: 132 GGGGGMGGSGGNICNGGGGVGGSGVDGGRSEDATDTYYREMIDSNPGNSLLTGNYAKFLK 191

Query: 262 QRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSH 321
           + KGD+ +AEEY  RAIL +++DG  LS YA L+   H D+Q+A SY+++A++ SP D +
Sbjct: 192 EVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQAVKMSPEDCY 251

Query: 322 VQAAYANFLWETEENEDEQSLVKE 340
           VQA+YA FLW+ +E+E++++L +E
Sbjct: 252 VQASYARFLWDVDEDEEDEALGEE 275

HSP 2 Score: 38.5 bits (88), Expect = 1.0e-02
Identity = 43/164 (26.22%), Postives = 63/164 (38.41%), Query Frame = 1


Query: 190 RKEMYLARGLGIGGGPGDGGGGG----RLQGGGGGGGGGEEYGMEEYYKKMVVENPSNAL 249
           R   +L   L    G GD          L  GGGGG GG             + N    +
Sbjct: 101 RSSPFLVERLFSSSGQGDKASSNDRLETLVSGGGGGMGGSGGN---------ICNGGGGV 160

Query: 250 VLSNYAEFLYQRKGDLGRAEE----YYSRAILMDSHDGETL--SKYAKLVWELHHDQQKA 309
             S           D GR+E+    YY   I  DS+ G +L    YAK + E+  D +KA
Sbjct: 161 GGSGV---------DGGRSEDATDTYYREMI--DSNPGNSLLTGNYAKFLKEVKGDMKKA 220

Query: 310 LSYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATK 344
             Y +RA+  +  D +V + YA+ +    ++        + A K
Sbjct: 221 EEYCERAILGNTNDGNVLSLYADLILHNHQDRQRAHSYYKQAVK 244

[Close]

BLAST of Cucsa.348890 vs. TAIR10
Match: AT4G17940.1 (AT4G17940.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.7e-32
Identity = 70/162 (43.21%), Postives = 99/162 (61.11%), Query Frame = 1


Query: 178 AGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMV 237
           A G G    G L  E     G G+GGG G  GG     G GGGGG  ++  + +YY++M+
Sbjct: 103 ADGWGSMISGGLPVEEKCFTGGGVGGGSGYSGG----YGNGGGGGYEDKSKIGDYYREML 162

Query: 238 VENPSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQ 297
             NP+N+L+L NY +FLY+ + D   AEEYY RAIL +  DGE LS Y +L+WE   D++
Sbjct: 163 RSNPNNSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEK 222

Query: 298 KALSYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKE 340
           +A  YF +A+ ASP D  V  +YA F+WE E+++D+    +E
Sbjct: 223 RAQGYFDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEE 260

[Close]

BLAST of Cucsa.348890 vs. TAIR10
Match: AT5G20190.1 (AT5G20190.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-32
Identity = 65/135 (48.15%), Postives = 92/135 (68.15%), Query Frame = 1


Query: 200 GIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYQRKG 259
           G GGG   GGG GR  G   GG GG++   + +Y+KM+  NP N + LSNYA+FL + + 
Sbjct: 128 GGGGGMFHGGGKGRSGGRSDGGDGGDD-NTDVHYRKMIEANPGNGIFLSNYAKFLKEVRK 187

Query: 260 DLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSHVQAA 319
           D  +AEEY  RAIL+  +DG  L+ YA+LVW++H D  +A +YF +A+ A+P D +VQA+
Sbjct: 188 DYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDSSRAENYFNQAVAAAPEDCYVQAS 247

Query: 320 YANFLWETEENEDEQ 335
           YA FLW+ EE E+E+
Sbjct: 248 YARFLWDAEEEEEEE 261

[Close]

BLAST of Cucsa.348890 vs. TAIR10
Match: AT4G32340.1 (AT4G32340.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 9.6e-30
Identity = 67/134 (50.00%), Postives = 88/134 (65.67%), Query Frame = 1


Query: 202 GGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYQRKGDL 261
           G   G GG GG   GGGGGGGGG   G   YY++M+   P + L+LSNYA FL + KGD 
Sbjct: 86  GSNGGFGGRGGDGAGGGGGGGGGSVDG---YYEEMIQRYPGDTLLLSNYARFLKEVKGDG 145

Query: 262 GRAEEYYSRAILMDS-HDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSHVQAAY 321
            +AEEY  RA+L +S  DGE LS Y  L+W+ H D  +A SY+ +A+Q+SP D +V A+Y
Sbjct: 146 RKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSPDDCNVLASY 205

Query: 322 ANFLWETEENEDEQ 335
           A FLW+ EE  +E+
Sbjct: 206 ARFLWDAEEEVEEE 216

[Close]

BLAST of Cucsa.348890 vs. TAIR10
Match: AT1G04530.1 (AT1G04530.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-25
Identity = 55/112 (49.11%), Postives = 79/112 (70.54%), Query Frame = 1


Query: 223 GGEEYGMEEYYKKMVVENPSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETL 282
           G ++    +YYK M+ E P + L+L NYA+FL + KGDL  AEEYY +  +++  DG  L
Sbjct: 115 GYDDKNCGDYYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPSDGVAL 174

Query: 283 SKYAKLVWELHHDQQKALSYFQRALQASPLDSHVQAAYANFLWETEENEDEQ 335
           + Y +LV +LH D+ KA+SYF+RA+QASP DS V AAYA+FLWE   ++D++
Sbjct: 175 ANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDE 225

HSP 2 Score: 78.6 bits (192), Expect = 8.7e-15
Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1


Query: 232 YYKKMVVENPSNALVLSNYAEFLYQRKGD-------------LGRAEEYYS-------RA 291
           Y+++ V  +P +++VL+ YA FL++   D              G+ ++ +        ++
Sbjct: 193 YFERAVQASPDDSIVLAAYASFLWEINADDDDEDDDEDDDESSGQGKDEFEADAAGKGKS 252

Query: 292 ILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQASPLDSHVQAAYANFLWETEE 330
            L  + DGETL +YAK  W +++D +KAL YF++A++ASP DS +   YA FLWE +E
Sbjct: 253 SLSKTEDGETLCRYAKAFWSINNDHEKALFYFEKAVEASPNDSIILGEYARFLWEIDE 310

[Close]

BLAST of Cucsa.348890 vs. NCBI nr
Match: gi|778711625|ref|XP_004140576.2| (PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus])

HSP 1 Score: 718.4 bits (1853), Expect = 6.2e-204
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180
           PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG
Sbjct: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180

Query: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240
           DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN
Sbjct: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240

Query: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300
           PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL
Sbjct: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300

Query: 301 SYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATKTYTAAATA 352
           SYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATKTYTAAATA
Sbjct: 301 SYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATKTYTAAATA 351

[Close]

BLAST of Cucsa.348890 vs. NCBI nr
Match: gi|659120013|ref|XP_008459965.1| (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])

HSP 1 Score: 647.5 bits (1669), Expect = 1.3e-182
Identity = 320/354 (90.40%), Postives = 333/354 (94.07%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPPDHHHH--DLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFS 60
           MLLKSSSTPLLGSLLPPDHHHH  DL GKHSPSTFPFHCNNKPLSFSTTTASL+SSP+FS
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPSTFPFHCNNKPLSFSTTTASLNSSPSFS 60

Query: 61  DHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQ 120
           DHHRA APSGFRRTNSEGNLNT+SHAS+VIDVHEDPFS DSVNFKSS KF  GLKRS+LQ
Sbjct: 61  DHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKRSVLQ 120

Query: 121 TIPSFSFYGSRARTEE-EEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVG 180
           TIPSFSFYGSR RTEE EEEEEDREID +EEED LGNF I+AA++TPEVRAMEQAWSRVG
Sbjct: 121 TIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGINAAVITPEVRAMEQAWSRVG 180

Query: 181 AGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMV 240
           AGGDG+GFVGDLRKEMYLARGLGIGGGPGDGGGGGRL  GGGGGGGGEEYGMEEYYKKMV
Sbjct: 181 AGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGMEEYYKKMV 240

Query: 241 VENPSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQ 300
           VENP NALVLSNYAEFLY+RKGDL RAEEYYSRAILMDS DGE LSKYAKLVWELHHDQQ
Sbjct: 241 VENPGNALVLSNYAEFLYKRKGDLRRAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQ 300

Query: 301 KALSYFQRALQASPLDSHVQAAYANFLWETEENEDEQSLVKETATKTYTAAATA 352
           KA+SYFQRALQASP DSHVQAAYANFLWETEENEDEQS+ KETATKTYTAAATA
Sbjct: 301 KAISYFQRALQASPHDSHVQAAYANFLWETEENEDEQSIGKETATKTYTAAATA 354

[Close]

BLAST of Cucsa.348890 vs. NCBI nr
Match: gi|700191169|gb|KGN46373.1| (hypothetical protein Csa_6G088010 [Cucumis sativus])

HSP 1 Score: 644.4 bits (1661), Expect = 1.1e-181
Identity = 313/315 (99.37%), Postives = 314/315 (99.68%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60
           MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHDLHGKHSPSTFPFHCNNKPLSFSTTTASLSSSPAFSDH 60

Query: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120
           HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI
Sbjct: 61  HRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKRSILQTI 120

Query: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180
           PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG
Sbjct: 121 PSFSFYGSRARTEEEEEEEDREIDGKEEEDGLGNFSIDAAIVTPEVRAMEQAWSRVGAGG 180

Query: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240
           DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN
Sbjct: 181 DGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVEN 240

Query: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300
           PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL
Sbjct: 241 PSNALVLSNYAEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKAL 300

Query: 301 SYFQRALQASPLDSH 316
           SYFQRALQASPLD +
Sbjct: 301 SYFQRALQASPLDRY 315

[Close]

BLAST of Cucsa.348890 vs. NCBI nr
Match: gi|590715332|ref|XP_007050165.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 185/381 (48.56%), Postives = 231/381 (60.63%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLL------PPDHHHHDLHG--KHSPSTFPFHCNNKPLSFS------- 60
           MLL+SSSTPLLGSLL      P +++H++     +H PST  FH N+  +SF        
Sbjct: 31  MLLRSSSTPLLGSLLSSITDSPSNNNHYETSTPIRHYPST-SFHHNHNRISFHPSPGSLH 90

Query: 61  -TTTASLSSSPA-------FSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSF 120
            +TT S  SSP        FSD  R     GFRR  SEGNL  + HA+   D +ED +  
Sbjct: 91  LSTTVSCGSSPISPSVVHQFSDFDR----QGFRRAQSEGNLEGLVHAA--CDTNEDFY-- 150

Query: 121 DSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEE---EDREIDGKEEEDGL-- 180
              N    KK     +R +LQTIPSFSFY S AR EEEE+E   E+ E + KE E+ L  
Sbjct: 151 ---NHNQPKKLSARHQRLMLQTIPSFSFYNSNARCEEEEDESDLEEEEEELKENEELLDS 210

Query: 181 ---------GN-----FSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARG 240
                    GN     F ++  ++  EV+   ++W+ VG   +G G VG+   +M+LARG
Sbjct: 211 GEERVTAMNGNLEFNAFRMENILLNEEVKG--KSWN-VGFEDEG-GLVGE---KMFLARG 270

Query: 241 L--------GIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNY 300
           L        G+ GG G GGGGG     G GG G   +G+EE+Y++MV ENP N L L NY
Sbjct: 271 LSTDGGSAGGVSGGSG-GGGGGEFNPAGSGGDGANNHGVEEHYRRMVEENPGNPLFLGNY 330

Query: 301 AEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQAS 332
           A+FLYQ K DL  AEEYYSRAIL D  DGETLS+YAKLVWELHHDQ++A SYF+RA+QAS
Sbjct: 331 AQFLYQSKKDLEAAEEYYSRAILADPKDGETLSQYAKLVWELHHDQERASSYFERAVQAS 390

[Close]

BLAST of Cucsa.348890 vs. NCBI nr
Match: gi|590715335|ref|XP_007050166.1| (Tetratricopeptide repeat-like superfamily protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 185/381 (48.56%), Postives = 231/381 (60.63%), Query Frame = 1


Query: 1   MLLKSSSTPLLGSLL------PPDHHHHDLHG--KHSPSTFPFHCNNKPLSFS------- 60
           MLL+SSSTPLLGSLL      P +++H++     +H PST  FH N+  +SF        
Sbjct: 1   MLLRSSSTPLLGSLLSSITDSPSNNNHYETSTPIRHYPST-SFHHNHNRISFHPSPGSLH 60

Query: 61  -TTTASLSSSPA-------FSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSF 120
            +TT S  SSP        FSD  R     GFRR  SEGNL  + HA+   D +ED +  
Sbjct: 61  LSTTVSCGSSPISPSVVHQFSDFDR----QGFRRAQSEGNLEGLVHAA--CDTNEDFY-- 120

Query: 121 DSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRARTEEEEEE---EDREIDGKEEEDGL-- 180
              N    KK     +R +LQTIPSFSFY S AR EEEE+E   E+ E + KE E+ L  
Sbjct: 121 ---NHNQPKKLSARHQRLMLQTIPSFSFYNSNARCEEEEDESDLEEEEEELKENEELLDS 180

Query: 181 ---------GN-----FSIDAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARG 240
                    GN     F ++  ++  EV+   ++W+ VG   +G G VG+   +M+LARG
Sbjct: 181 GEERVTAMNGNLEFNAFRMENILLNEEVKG--KSWN-VGFEDEG-GLVGE---KMFLARG 240

Query: 241 L--------GIGGGPGDGGGGGRLQGGGGGGGGGEEYGMEEYYKKMVVENPSNALVLSNY 300
           L        G+ GG G GGGGG     G GG G   +G+EE+Y++MV ENP N L L NY
Sbjct: 241 LSTDGGSAGGVSGGSG-GGGGGEFNPAGSGGDGANNHGVEEHYRRMVEENPGNPLFLGNY 300

Query: 301 AEFLYQRKGDLGRAEEYYSRAILMDSHDGETLSKYAKLVWELHHDQQKALSYFQRALQAS 332
           A+FLYQ K DL  AEEYYSRAIL D  DGETLS+YAKLVWELHHDQ++A SYF+RA+QAS
Sbjct: 301 AQFLYQSKKDLEAAEEYYSRAILADPKDGETLSQYAKLVWELHHDQERASSYFERAVQAS 360

The following BLAST results are available for this feature:

BLAST of Cucsa.348890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FOXD1_CHICK	1.8e-09	35.71	Forkhead box protein D1 OS=Gallus gallus GN=FOXD1 PE=2 SV=1	[more]

BLAST of Cucsa.348890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA70_CUCSA	7.9e-182	99.37	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G088010 PE=4 SV=1	[more]
A0A061DPH6_THECC	1.0e-72	48.56	Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobro...	[more]
A0A061DWD9_THECC	1.0e-72	48.56	Tetratricopeptide repeat-like superfamily protein, putative isoform 2 OS=Theobro...	[more]
A0A0D2M2D7_GOSRA	1.5e-68	44.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G237800 PE=4 SV=1	[more]
A0A0B0NB65_GOSAR	4.9e-67	43.78	Beta-lactamase hcpB OS=Gossypium arboreum GN=F383_16008 PE=4 SV=1	[more]

BLAST of Cucsa.348890 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80130.1	1.9e-33	47.92	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G17940.1	2.7e-32	43.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G20190.1	4.6e-32	48.15	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32340.1	9.6e-30	50.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G04530.1	5.5e-25	49.11	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Cucsa.348890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778711625\|ref\|XP_004140576.2\|	6.2e-204	100.00	PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus]	[more]
gi\|659120013\|ref\|XP_008459965.1\|	1.3e-182	90.40	PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]	[more]
gi\|700191169\|gb\|KGN46373.1\|	1.1e-181	99.37	hypothetical protein Csa_6G088010 [Cucumis sativus]	[more]
gi\|590715332\|ref\|XP_007050165.1\|	1.5e-72	48.56	Tetratricopeptide repeat-like superfamily protein, putative isoform 1 [Theobroma...	[more]
gi\|590715335\|ref\|XP_007050166.1\|	1.5e-72	48.56	Tetratricopeptide repeat-like superfamily protein, putative isoform 2 [Theobroma...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR013026	TPR-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008150	biological_process
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.348890.1	Cucsa.348890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 230..332 score: 1.2
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 231..331 score: 7.59
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 231..313 score: 12
None	No IPR available	unknown	Coil	Coil	coord: 129..149 scor
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 114..350 score: 7.5
None	No IPR available	PANTHER	PTHR26312:SF89	SUBFAMILY NOT NAMED	coord: 114..350 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.348890	Cla021480	Watermelon (97103) v1	cgywmB625
Cucsa.348890	Cla007065	Watermelon (97103) v1	cgywmB626
Cucsa.348890	Csa3G134570	Cucumber (Chinese Long) v2	cgycuB489
Cucsa.348890	Csa6G088010	Cucumber (Chinese Long) v2	cgycuB490
Cucsa.348890	MELO3C022390	Melon (DHL92) v3.5.1	cgymeB564
Cucsa.348890	ClCG06G001430	Watermelon (Charleston Gray)	cgywcgB595
Cucsa.348890	CSPI03G11520	Wild cucumber (PI 183967)	cgycpiB516
Cucsa.348890	CSPI06G07000	Wild cucumber (PI 183967)	cgycpiB517
Cucsa.348890	CmaCh17G013720	Cucurbita maxima (Rimu)	cgycmaB0951
Cucsa.348890	CmoCh17G013260	Cucurbita moschata (Rifu)	cgycmoB0951
Cucsa.348890	Lsi09G017980	Bottle gourd (USVL1VR-Ls)	cgylsiB562
Cucsa.348890	Cp4.1LG12g10270	Cucurbita pepo (Zucchini)	cgycpeB0907
Cucsa.348890	MELO3C022390.2	Melon (DHL92) v3.6.1	cgymedB565
Cucsa.348890	CsaV3_3G011640	Cucumber (Chinese Long) v3	cgycucB531
Cucsa.348890	CsaV3_6G007370	Cucumber (Chinese Long) v3	cgycucB532
Cucsa.348890	Cla97C06G110730	Watermelon (97103) v2	cgywmbB596
Cucsa.348890	Bhi12G002086	Wax gourd	cgywgoB696
Cucsa.348890	Carg11540	Silver-seed gourd	carcgyB0012

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cucsa.348890	Cucsa.255840	Cucumber (Gy14) v1	cgycgyB129

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.348890	Cucurbita maxima (Rimu)	cgycmaB0955
Cucsa.348890	Cucurbita moschata (Rifu)	cgycmoB0955
Cucsa.348890	Cucurbita pepo (Zucchini)	cgycpeB0911
Cucsa.348890	Silver-seed gourd	carcgyB1099