Cla97C06G110730 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C06G110730
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cla97Chr06 : 1390025 .. 1391552 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTTAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCGCCGGACCACCACCACCACCACCACGACGCCGTCGGAAAACACTCCTCCCCTTCCCCTTCCCCTTCCCCTTCCCCCTTCGCCTTCCACTCCAAAAATAAAACGCTTTCTTTCTCCACCACTGCTTCTCTTCACTCCTCGCCTTCTTTCTCCGATCACCACCACACCACTCCCACTGGCTTCCGGAGAACCCACTCCGATGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCAATGTCCATGAAGATCCCTTCTCCTTTGATTCCTTCAATTTCAAATCCTCTAATAACCTCTGCCATAGCCTCAAACGCTCAATTCTCCAGACTATACCCTCGTTTTCCTTCTATGGTTCTAGAGCCAGGATTGAAGAAGATGATGACGATGATGATCAACATACTGATCTAGAGGTGGATGAAGATGACTTGGGGAATTTTGGCATTGACAACAGGTTCAGGATGGACGCTGCTGCCGTTGTAACTCCCGAGGTTAGGGCCATGGAACAAGCTTGGACTAGAGAAGATGCTGGTGATAGGATGGGTTTTGTGGGTGATTTACAGAAAGAGATGTATCTGGCTAGAGGGCTCGGCATCGGAGGATCGGATGGTGGCGGCGGTGGTGGTCGACGGTGGAGTAGTGGCGGCAGCGGTGGTGGAGGTGAGCAACATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTTTGGTTTTAAGTAACTATGCGGAGTTCTTATACCAGGCAAGTTCTAACATTGTTTCCGTTTCTATCTAATGCTGTGTCATTTAGGCGATGTGACAGTTGGCCTGAGAATAAGGTATTAATTATTGCCATACTTAGCCAGTCAATCTAAGGCATTTCCATTGAATTTTGTTGGCAGAAGAAAAGAGACCTGCGAGGAGCTGAAGAGTATTACAGTAGAGCCATTTTGATGGATTCCCAAGATGGAGAAATTCTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGGTAATCACTTCCCACCTTAATTCCTTCTTTTTCCTCTTTACTTATTTCTACAAAACGATTTGCTTGAATTATAACTTTAATCCTCAACTCATTATGAGGTTAAGTGAAGTTTATATTCTCCTGTATGAACCATAAATAAACGCAACCTCACTAAACCTGTGGTTTATCTATTTGACTAAGGTCAGGGTATTATGGTATCTTTTACTGTCTAAGAAAGAGAATAATAAGAAAGAAATGTTTGAAGAGGAAGATGCTAAATCTGATGCAAAAAAAAATTACATTGTGTGAATCTTTCAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGATGAACACAGCTTAGGAAAAGTGATGGCAACACAGACTTACAAAGCAGCTGCAACTGCTTGA

mRNA sequence

ATGCTTCTTAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCGCCGGACCACCACCACCACCACCACGACGCCGTCGGAAAACACTCCTCCCCTTCCCCTTCCCCTTCCCCTTCCCCCTTCGCCTTCCACTCCAAAAATAAAACGCTTTCTTTCTCCACCACTGCTTCTCTTCACTCCTCGCCTTCTTTCTCCGATCACCACCACACCACTCCCACTGGCTTCCGGAGAACCCACTCCGATGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCAATGTCCATGAAGATCCCTTCTCCTTTGATTCCTTCAATTTCAAATCCTCTAATAACCTCTGCCATAGCCTCAAACGCTCAATTCTCCAGACTATACCCTCGTTTTCCTTCTATGGTTCTAGAGCCAGGATTGAAGAAGATGATGACGATGATGATCAACATACTGATCTAGAGGTGGATGAAGATGACTTGGGGAATTTTGGCATTGACAACAGGTTCAGGATGGACGCTGCTGCCGTTGTAACTCCCGAGGTTAGGGCCATGGAACAAGCTTGGACTAGAGAAGATGCTGGTGATAGGATGGGTTTTGTGGGTGATTTACAGAAAGAGATGTATCTGGCTAGAGGGCTCGGCATCGGAGGATCGGATGGTGGCGGCGGTGGTGGTCGACGGTGGAGTAGTGGCGGCAGCGGTGGTGGAGGTGAGCAACATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTTTGGTTTTAAGTAACTATGCGGAGTTCTTATACCAGGCAAGTTCTAACATTGTTTCCAAGAAAAGAGACCTGCGAGGAGCTGAAGAGTATTACAGTAGAGCCATTTTGATGGATTCCCAAGATGGAGAAATTCTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGATGAACACAGCTTAGGAAAAGTGATGGCAACACAGACTTACAAAGCAGCTGCAACTGCTTGA

Coding sequence (CDS)

ATGCTTCTTAAAAGCTCTTCAACGCCGCTTCTTGGCTCTCTTCTCCCGCCGGACCACCACCACCACCACCACGACGCCGTCGGAAAACACTCCTCCCCTTCCCCTTCCCCTTCCCCTTCCCCCTTCGCCTTCCACTCCAAAAATAAAACGCTTTCTTTCTCCACCACTGCTTCTCTTCACTCCTCGCCTTCTTTCTCCGATCACCACCACACCACTCCCACTGGCTTCCGGAGAACCCACTCCGATGGAAATTTGAATACCCTTTCCCATGCTTCTGATGTAATCAATGTCCATGAAGATCCCTTCTCCTTTGATTCCTTCAATTTCAAATCCTCTAATAACCTCTGCCATAGCCTCAAACGCTCAATTCTCCAGACTATACCCTCGTTTTCCTTCTATGGTTCTAGAGCCAGGATTGAAGAAGATGATGACGATGATGATCAACATACTGATCTAGAGGTGGATGAAGATGACTTGGGGAATTTTGGCATTGACAACAGGTTCAGGATGGACGCTGCTGCCGTTGTAACTCCCGAGGTTAGGGCCATGGAACAAGCTTGGACTAGAGAAGATGCTGGTGATAGGATGGGTTTTGTGGGTGATTTACAGAAAGAGATGTATCTGGCTAGAGGGCTCGGCATCGGAGGATCGGATGGTGGCGGCGGTGGTGGTCGACGGTGGAGTAGTGGCGGCAGCGGTGGTGGAGGTGAGCAACATGGGATGGAGGAGTATTACAAGAAAATGGTGGTGGAAAATCCAGGGAATGCTTTGGTTTTAAGTAACTATGCGGAGTTCTTATACCAGGCAAGTTCTAACATTGTTTCCAAGAAAAGAGACCTGCGAGGAGCTGAAGAGTATTACAGTAGAGCCATTTTGATGGATTCCCAAGATGGAGAAATTCTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTATCCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCCATGTGCAAGCAGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGATGAACACAGCTTAGGAAAAGTGATGGCAACACAGACTTACAAAGCAGCTGCAACTGCTTGA

Protein sequence

MLLKSSSTPLLGSLLPPDHHHHHHDAVGKHSSPSPSPSPSPFAFHSKNKTLSFSTTASLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKRSILQTIPSFSFYGSRARIEEDDDDDDQHTDLEVDEDDLGNFGIDNRFRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGGSDGGGGGGRRWSSGGSGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQASSNIVSKKRDLRGAEEYYSRAILMDSQDGEILSKYAKLVWELHHDQQKALSYFQRALQASPHDSHVQAAYANFLWETEEDEDEHSLGKVMATQTYKAAATA

Homology

[Close]

BLAST of Cla97C06G110730 vs. NCBI nr
Match: KGN46373.1 (hypothetical protein Csa_6G088010 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 9.7e-55
Identity = 198/276 (71.74%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 1   MLLKSSSTPLLGXXXXXXXXXXXXXXXGKHXXXXXXXXXXXXXXXXXXXXXXXXXXXSLH 60
           MLLKSSSTPLLG  XXXXXXXXXX   GKH                           SL 
Sbjct: 1   MLLKSSSTPLLG--XXXXXXXXXXDLHGKH------SPSTFPFHCNNKPLSFSTTTASLS 60

Query: 61  SSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSL 120
           SSP+FSDHH    P+GFRRT+S+GNLNT+SHASDVI+VHEDPFSFDS NFKSS   CH L
Sbjct: 61  SSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGL 120

Query: 121 KRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVTPE 180
           KRSILQTIPSFSFYGSRA  XXXXXXXXXXX  + +ED LGNF ID       AA+VTPE
Sbjct: 121 KRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGLGNFSID-------AAIVTPE 180

Query: 181 VRAMEQAWTREDA-GDRMGFVGDLQKEMYLARGLGIG-XXXXXXXXXXXXXXXXXXXXXX 240
           VRAMEQAW+R  A GD MGFVGDL+KEMYLARGLGIG XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXENPGNALVLSNYAEFLYQASSNI 274
           XXXXXXXXXXXXXENP NALVLSNYAEFLYQ   ++
Sbjct: 241 XXXXXXXXXXXXXENPSNALVLSNYAEFLYQRKGDL 261

[Close]

BLAST of Cla97C06G110730 vs. NCBI nr
Match: XP_004140576.2 (PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus])

HSP 1 Score: 223.8 bits (569), Expect = 9.7e-55
Identity = 198/276 (71.74%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 1   MLLKSSSTPLLGXXXXXXXXXXXXXXXGKHXXXXXXXXXXXXXXXXXXXXXXXXXXXSLH 60
           MLLKSSSTPLLG  XXXXXXXXXX   GKH                           SL 
Sbjct: 1   MLLKSSSTPLLG--XXXXXXXXXXDLHGKH------SPSTFPFHCNNKPLSFSTTTASLS 60

Query: 61  SSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSL 120
           SSP+FSDHH    P+GFRRT+S+GNLNT+SHASDVI+VHEDPFSFDS NFKSS   CH L
Sbjct: 61  SSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGL 120

Query: 121 KRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVTPE 180
           KRSILQTIPSFSFYGSRA  XXXXXXXXXXX  + +ED LGNF ID       AA+VTPE
Sbjct: 121 KRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGLGNFSID-------AAIVTPE 180

Query: 181 VRAMEQAWTREDA-GDRMGFVGDLQKEMYLARGLGIG-XXXXXXXXXXXXXXXXXXXXXX 240
           VRAMEQAW+R  A GD MGFVGDL+KEMYLARGLGIG XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXENPGNALVLSNYAEFLYQASSNI 274
           XXXXXXXXXXXXXENP NALVLSNYAEFLYQ   ++
Sbjct: 241 XXXXXXXXXXXXXENPSNALVLSNYAEFLYQRKGDL 261

[Close]

BLAST of Cla97C06G110730 vs. NCBI nr
Match: XP_008459965.1 (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])

HSP 1 Score: 202.2 bits (513), Expect = 3.0e-48
Identity = 165/220 (75.00%), Postives = 181/220 (82.27%), Query Frame = 0


Query: 58  SLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLC 117
           SL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VHEDPFS DS NFKSSN   
Sbjct: 52  SLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFS 111

Query: 118 HSLKRSILQTIPSFSFYGSRAR-IXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAV 177
             LKRS+LQTIPSFSFYGSR R  XXXXXXXXXXX        LGNFGI+       AAV
Sbjct: 112 RGLKRSVLQTIPSFSFYGSRVRXXXXXXXXXXXXXXXXXXXXXLGNFGIN-------AAV 171

Query: 178 VTPEVRAMEQAWTREDA-GDRMGFVGDLQKEMYLARGLGIG-XXXXXXXXXXXXXXXXXX 237
           +TPEVRAMEQAW+R  A GD +GFVGDL+KEMYLARGLGIG XXXXXXXXXXXXXXXXXX
Sbjct: 172 ITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGXXXXXXXXXXXXXXXXXXX 231

Query: 238 XXXXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQASSNI 274
           XXXXXXXXXXXXXXX  ENPGNALVLSNYAEFLY+   ++
Sbjct: 232 XXXXXXXXXXXXXXXVVENPGNALVLSNYAEFLYKRKGDL 264

[Close]

BLAST of Cla97C06G110730 vs. NCBI nr
Match: GAV87988.1 (TPR_11 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 72.0 bits (175), Expect = 4.7e-09
Identity = 70/222 (31.53%), Postives = 93/222 (41.89%), Query Frame = 0


Query: 62  SPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKR 121
           SPS ++ H+++    RR  SDGNL  L+HAS   NV E       ++    N      KR
Sbjct: 153 SPSTAESHNSS---IRRAQSDGNLEGLAHASCNKNVEE------FYDTNQPNKFAARKKR 212

Query: 122 SILQTIPSFSFYGSRA--------------RIXXXXXXXXXXXDLEVDEDDLGNFGIDNR 181
            +LQTIPSFS Y SR+                XXX           V   D G FG++N 
Sbjct: 213 FMLQTIPSFSIYNSRSGREXXXXXXXXXXXXXXXXLFDRKGSSGERVTATDGGGFGLEN- 272

Query: 182 FRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGXXXXXXXXXXXX 241
             + A  V++ EV+A +  W        + F  +  +EM+LARGLGI             
Sbjct: 273 --VMAHMVLSEEVKAKDGVW-------NVAFGEETSQEMHLARGLGIA--HTSGGGGDHN 332

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQA 270
                                  ENPGN L L NYA+ LYQ+
Sbjct: 333 PASSGGDVGDNHSVEQYFKRMMEENPGNPLFLRNYAQLLYQS 353

[Close]

BLAST of Cla97C06G110730 vs. NCBI nr
Match: GAY40229.1 (hypothetical protein CUMW_050400 [Citrus unshiu])

HSP 1 Score: 62.0 bits (149), Expect = 4.9e-06
Identity = 87/214 (40.65%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 58  SLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCH 117
           S  SSPS +DH      G RR  S+GNL  L+HAS      E+   + +    S+  +  
Sbjct: 69  SPRSSPSVADH-----KGIRRAQSEGNLAGLAHAS---CKDEEEHLYKANQPNSNKRVLG 128

Query: 118 SLKRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVT 177
             K S+L++IPSFS        XXXXXXXXXXX           F ++N     A   ++
Sbjct: 129 RYKCSVLKSIPSFSSV-DXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGM---AGTALS 188

Query: 178 PEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIG--XXXXXXXXXXXXXXXXXXXX 237
            EV+ ME  W      +R    G + +EMYLA+GLG+G  XXXXXXXXXXXXXX      
Sbjct: 189 EEVKVMEALWNVGFEQER----GTVGQEMYLAKGLGVGXXXXXXXXXXXXXXXXYPAGSG 248

Query: 238 XXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQA 270
                          ENPGN L LSNYA+FLYQ+
Sbjct: 249 GDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQS 266

[Close]

BLAST of Cla97C06G110730 vs. TrEMBL
Match: tr|A0A0A0KA70|A0A0A0KA70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 6.4e-55
Identity = 198/276 (71.74%), Postives = 211/276 (76.45%), Query Frame = 0


Query: 1   MLLKSSSTPLLGXXXXXXXXXXXXXXXGKHXXXXXXXXXXXXXXXXXXXXXXXXXXXSLH 60
           MLLKSSSTPLLG  XXXXXXXXXX   GKH                           SL 
Sbjct: 1   MLLKSSSTPLLG--XXXXXXXXXXDLHGKH------SPSTFPFHCNNKPLSFSTTTASLS 60

Query: 61  SSPSFSDHHH-TTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSL 120
           SSP+FSDHH    P+GFRRT+S+GNLNT+SHASDVI+VHEDPFSFDS NFKSS   CH L
Sbjct: 61  SSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGL 120

Query: 121 KRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVTPE 180
           KRSILQTIPSFSFYGSRA  XXXXXXXXXXX  + +ED LGNF ID       AA+VTPE
Sbjct: 121 KRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGLGNFSID-------AAIVTPE 180

Query: 181 VRAMEQAWTREDA-GDRMGFVGDLQKEMYLARGLGIG-XXXXXXXXXXXXXXXXXXXXXX 240
           VRAMEQAW+R  A GD MGFVGDL+KEMYLARGLGIG XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXENPGNALVLSNYAEFLYQASSNI 274
           XXXXXXXXXXXXXENP NALVLSNYAEFLYQ   ++
Sbjct: 241 XXXXXXXXXXXXXENPSNALVLSNYAEFLYQRKGDL 261

[Close]

BLAST of Cla97C06G110730 vs. TrEMBL
Match: tr|A0A1S3CCM7|A0A1S3CCM7_CUCME (uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.0e-48
Identity = 165/220 (75.00%), Postives = 181/220 (82.27%), Query Frame = 0


Query: 58  SLHSSPSFSDHHHT-TPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLC 117
           SL+SSPSFSDHH    P+GFRRT+S+GNLNT+SHAS+VI+VHEDPFS DS NFKSSN   
Sbjct: 52  SLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFS 111

Query: 118 HSLKRSILQTIPSFSFYGSRAR-IXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAV 177
             LKRS+LQTIPSFSFYGSR R  XXXXXXXXXXX        LGNFGI+       AAV
Sbjct: 112 RGLKRSVLQTIPSFSFYGSRVRXXXXXXXXXXXXXXXXXXXXXLGNFGIN-------AAV 171

Query: 178 VTPEVRAMEQAWTREDA-GDRMGFVGDLQKEMYLARGLGIG-XXXXXXXXXXXXXXXXXX 237
           +TPEVRAMEQAW+R  A GD +GFVGDL+KEMYLARGLGIG XXXXXXXXXXXXXXXXXX
Sbjct: 172 ITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGXXXXXXXXXXXXXXXXXXX 231

Query: 238 XXXXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQASSNI 274
           XXXXXXXXXXXXXXX  ENPGNALVLSNYAEFLY+   ++
Sbjct: 232 XXXXXXXXXXXXXXXVVENPGNALVLSNYAEFLYKRKGDL 264

[Close]

BLAST of Cla97C06G110730 vs. TrEMBL
Match: tr|A0A1Q3D6W5|A0A1Q3D6W5_CEPFO (TPR_11 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31412 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.1e-09
Identity = 70/222 (31.53%), Postives = 93/222 (41.89%), Query Frame = 0


Query: 62  SPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCHSLKR 121
           SPS ++ H+++    RR  SDGNL  L+HAS   NV E       ++    N      KR
Sbjct: 153 SPSTAESHNSS---IRRAQSDGNLEGLAHASCNKNVEE------FYDTNQPNKFAARKKR 212

Query: 122 SILQTIPSFSFYGSRA--------------RIXXXXXXXXXXXDLEVDEDDLGNFGIDNR 181
            +LQTIPSFS Y SR+                XXX           V   D G FG++N 
Sbjct: 213 FMLQTIPSFSIYNSRSGREXXXXXXXXXXXXXXXXLFDRKGSSGERVTATDGGGFGLEN- 272

Query: 182 FRMDAAAVVTPEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIGXXXXXXXXXXXX 241
             + A  V++ EV+A +  W        + F  +  +EM+LARGLGI             
Sbjct: 273 --VMAHMVLSEEVKAKDGVW-------NVAFGEETSQEMHLARGLGIA--HTSGGGGDHN 332

Query: 242 XXXXXXXXXXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQA 270
                                  ENPGN L L NYA+ LYQ+
Sbjct: 333 PASSGGDVGDNHSVEQYFKRMMEENPGNPLFLRNYAQLLYQS 353

[Close]

BLAST of Cla97C06G110730 vs. TrEMBL
Match: tr|A0A2H5NJ79|A0A2H5NJ79_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_050400 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.2e-06
Identity = 87/214 (40.65%), Postives = 110/214 (51.40%), Query Frame = 0


Query: 58  SLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCH 117
           S  SSPS +DH      G RR  S+GNL  L+HAS      E+   + +    S+  +  
Sbjct: 69  SPRSSPSVADH-----KGIRRAQSEGNLAGLAHAS---CKDEEEHLYKANQPNSNKRVLG 128

Query: 118 SLKRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVT 177
             K S+L++IPSFS        XXXXXXXXXXX           F ++N     A   ++
Sbjct: 129 RYKCSVLKSIPSFSSV-DXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGM---AGTALS 188

Query: 178 PEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIG--XXXXXXXXXXXXXXXXXXXX 237
            EV+ ME  W      +R    G + +EMYLA+GLG+G  XXXXXXXXXXXXXX      
Sbjct: 189 EEVKVMEALWNVGFEQER----GTVGQEMYLAKGLGVGXXXXXXXXXXXXXXXXYPAGSG 248

Query: 238 XXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQA 270
                          ENPGN L LSNYA+FLYQ+
Sbjct: 249 GDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQS 266

[Close]

BLAST of Cla97C06G110730 vs. TrEMBL
Match: tr|V4VUN7|V4VUN7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020687mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.2e-06
Identity = 93/218 (42.66%), Postives = 117/218 (53.67%), Query Frame = 0


Query: 58  SLHSSPSFSDHHHTTPTGFRRTHSDGNLNTLSHASDVINVHEDPFSFDSFNFKSSNNLCH 117
           S  SSPS +DH      G RR  S+GNL  L+HAS      E+   +++    S+  +  
Sbjct: 69  SPRSSPSAADH-----KGIRRAQSEGNLAGLAHAS---CKDEEEHLYNANQPNSNKRVLG 128

Query: 118 SLKRSILQTIPSFSFYGSRARIXXXXXXXXXXXDLEVDEDDLGNFGIDNRFRMDAAAVVT 177
             K S+L++IPSFS        XXXXXXXXXXX           F ++N     A   ++
Sbjct: 129 RYKCSVLKSIPSFSSV-DXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGM---AGTALS 188

Query: 178 PEVRAMEQAWTREDAGDRMGFVGDLQKEMYLARGLGIG------XXXXXXXXXXXXXXXX 237
            EV+ ME  W      +R    G + +EMYLA+GLG+G      XXXXXXXXXXXXXXXX
Sbjct: 189 EEVKVMEALWNVGFEEER----GTVGQEMYLAKGLGVGGXXXXXXXXXXXXXXXXXXXXX 248

Query: 238 XXXXXXXXXXXXXXXXXXXENPGNALVLSNYAEFLYQA 270
           XXXX               ENPGN L LSNYA+FLYQ+
Sbjct: 249 XXXXGDSQGVEEYYKKMVEENPGNPLFLSNYAQFLYQS 270

The following BLAST results are available for this feature:

BLAST of Cla97C06G110730 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46373.1	9.7e-55	71.74	hypothetical protein Csa_6G088010 [Cucumis sativus]	[more]
XP_004140576.2	9.7e-55	71.74	PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus]	[more]
XP_008459965.1	3.0e-48	75.00	PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]	[more]
GAV87988.1	4.7e-09	31.53	TPR_11 domain-containing protein [Cephalotus follicularis]	[more]
GAY40229.1	4.9e-06	40.65	hypothetical protein CUMW_050400 [Citrus unshiu]	[more]

BLAST of Cla97C06G110730 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA70\|A0A0A0KA70_CUCSA	6.4e-55	71.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1	[more]
tr\|A0A1S3CCM7\|A0A1S3CCM7_CUCME	2.0e-48	75.00	uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=...	[more]
tr\|A0A1Q3D6W5\|A0A1Q3D6W5_CEPFO	3.1e-09	31.53	TPR_11 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_3...	[more]
tr\|A0A2H5NJ79\|A0A2H5NJ79_CITUN	3.2e-06	40.65	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_050400 PE=4 SV=1	[more]
tr\|V4VUN7\|V4VUN7_9ROSI	7.2e-06	42.66	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020687mg PE=4 ...	[more]

BLAST of Cla97C06G110730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cla97C06G110730 vs. TAIR10


Match Name	E-value	Identity	Description

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf
IPR003107	HAT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0006396	RNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C06G110730.1	Cla97C06G110730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 313..345 e-value: 25.0 score: 12.5 coord: 236..268 e-value: 91.0 score: 8.4 coord: 278..310 e-value: 55.0 score: 10.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 236..369 e-value: 2.8E-12 score: 48.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 242..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..238
None	No IPR available	PANTHER	PTHR26312:SF89	CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN	coord: 1..359
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 1..359
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 264..332 score: 11.484

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C06G110730	Cla007065	Watermelon (97103) v1	wmwmbB407
Cla97C06G110730	Csa6G088010	Cucumber (Chinese Long) v2	cuwmbB468
Cla97C06G110730	MELO3C022390	Melon (DHL92) v3.5.1	mewmbB127
Cla97C06G110730	ClCG06G001430	Watermelon (Charleston Gray)	wcgwmbB273
Cla97C06G110730	CSPI06G07000	Wild cucumber (PI 183967)	cpiwmbB495
Cla97C06G110730	Cucsa.348890	Cucumber (Gy14) v1	cgywmbB596
Cla97C06G110730	CmaCh17G013720	Cucurbita maxima (Rimu)	cmawmbB369
Cla97C06G110730	CmoCh17G013260	Cucurbita moschata (Rifu)	cmowmbB354
Cla97C06G110730	Lsi09G017980	Bottle gourd (USVL1VR-Ls)	lsiwmbB026
Cla97C06G110730	CsGy6G007030	Cucumber (Gy14) v2	cgybwmbB446
Cla97C06G110730	MELO3C022390.2	Melon (DHL92) v3.6.1	medwmbB118
Cla97C06G110730	Carg11540	Silver-seed gourd	carwmbB0011
Cla97C06G110730	CsaV3_6G007370	Cucumber (Chinese Long) v3	cucwmbB487
Cla97C06G110730	Bhi12G002086	Wax gourd	wgowmbB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C06G110730	Silver-seed gourd	carwmbB1032
Cla97C06G110730	Cucurbita maxima (Rimu)	cmawmbB922
Cla97C06G110730	Cucurbita moschata (Rifu)	cmowmbB897