Bhi12G002086 (gene) Wax gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Bhi12G002086
Type	gene
Organism	Benincasa hispida (Wax gourd)
Description	TPR_11 domain-containing protein
Location	chr12 : 74386344 .. 74388929 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAACTTTTGATGCCAACGTGGTGGTAAGGAAAAGGAAAGTTGGGGTGTTTTTTCGTGAGGTTTCCTCTTTACATTAAAACAAAAAGAGGTGACCACCGACCGTCCTTTTGGTATTGCGTATCTTCCAGTGGCATCTACATCCACTCCTCATCAAGATTCAATATCAACTACTTCCTTCCTCTTCTACCTTACAATTATATCTTCTAAACTCTTTCCATTATAATTTTTTCAATACACAAAACAAATCAAAATTATGCTGCTCAAAAGCTCTTCAACGCCGCTTCTTAGCTCTCTTCTCCCGCCGGACCACCACCACGACACCGTCCGAAAACACTCCTCCTCCCCTTCTCCTCCCCCCTTCGCCTTCCACTGCAATAACAAAACACTTTCTTTCTCCACCATTGCTTCTCTCAACTCCTCGCCTTCTTTCTCCGCCACTCCCACGGGCTTCCGGAGAACCCACTCCGAAGGAAATTTGAATACACTTTCCCATGCTCCCGATGTAATTGATGTCCATGAAGACCCCTTCTCCTTTGATTCCTTCAATTTCAAACCCTCCAACTCCCATAGCCTCAAACGCTCCCTTCTCCAGACTATACCCTCGTTTTCCTTCTACACCTCTAGAGCCAGGACTGAGGAAGATGATGACGACGATGATCAACATACTGATCCAGAGGAAGATGAAGATGGCTTGGGGAGTTTTGGCATTCAAAACAGGATGGTGACGGACGCTGCCATTGTAACTCCGGAGGTTAAGGCCATGGAGCACGCTTGGACTGATGGGATAGGGTTTGTGGGTGATTCACAGAAAGAGATGTATCTAACTAGTGAGCTAGGCATTGGAGGACAGGGGGATGGCGGCGGTGGTGGTCGACGGTGGAGTGGTGGCGGTGGTGGCGGAGGGGGTGAGCAACATGGCATGGAGGAGTATTACAAGAAAATGGTGATGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGTCCTAACGTTGTTTGAGTTTCCATCTCTTATGCTATGTATTATTTAGGCTAAATTATAAACTTAATTGGACTTAAAACTAGTATGACAGTGGCCTAAAATAAGGATTAGGACTGCCACACGATTTCTAGTCACGTTTTTCATCTGATTTTGAAAATAACAAGGTATTAATTATTGTTAAGCTGGTCAATCTAAGGCATTTCCATTTTATTTGGCTGGCAGAGGAGAGGAGACCTGCGAGGAGCAGAAGAGTATTACAGCAGAGCCATTTTGATGGATGCCCAAGATGGAGAAATTTTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTAACCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGGTCAACATTTTCCCACTTTGCTATAACTACAAAATGATTTGCTTAAACTATTTTAATCCTCAACTCAGTTATGAGGTTTAAGTGAAACTTATATTCCCCTGTATAAACTGTAAATAAACACAACCTTACTAAATTTCTGGTTTGTCCATAAGAAGATGGATACTAAGGTCAGGATATTATGGTAATTGAACCCTTGTGGTTATAGTAGCTTTTACTGTGTAAGAAGAGAATAATAAGAAAGAAATGTTTGACGCAAAAAAAAATAAAATAAAATAAAAAATTACATTGTGTGAATCTTCAGCTATGTGCAAGCTGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGACGAACACAGCTTAGGAAAAGGGATGGCAACACAGACTTACACGGCAGCCGCAACTAGCTTGAGATGAAAGTGATTGCCTATTGCTTTTTCTTGTTTCCTTCTTTGTAGAATAATCTCATCCTCACTGATAATAAACATTGTCGCAGCATTTTTAAAGTAGTTCCATGTTTCTGCAATGCAATGGACGTGAAGAAACAAACAAGAATAACAGAGAGGTAGTAGGGCAAAAGCAAATAAGTTCAGTATAAGATTTAATGAAAAAGATCATCTCTAAGTCTTTTTCCCTCACATTGCCTAACAAGTGCTTTTACTTGAAATGCCAAAATTTCCCCACTTGAATTGCATCTCAAAAACCATCCAAGGGGGAAAATTACCATCTTAACTTAATAATTAGTTCCTCACAAATTAACATTTTCAGTAACGTCAACTCACACGCTCAAAACACAAAGTACAAACCAATTCCCTAAACCACACACCGGAGACGCTTGCTTTCTTTGAACCATCAAACATAGTAACCACCTTCATATCAAAAACTCCTCCAAAGTTTCATCTCCATAATGGTTATGCACAAACAACTGGATGATTGATGATACTATTGAACCTTGTGGTAACCCCGCTGAGGGAAACCGTTGCCTCTCAACCGACCATAGTCACTGCCATCCTGGCTGCTTCCTCGACCCAAACTCCGAGAACCAAATCGTCCTCTTGGGGCCTCTGACTGGTAACTACCTCTCCCTCTTCCCCTTCCTGTTCATGGCACCAATAAATGCATCAGAAACTATCCATGAAAAGCCAATGCAAACAAATAATCTCAAGGAGGGTGGGAG

mRNA sequence

TTTAAACTTTTGATGCCAACGTGGTGGTAAGGAAAAGGAAAGTTGGGGTGTTTTTTCGTGAGGTTTCCTCTTTACATTAAAACAAAAAGAGGTGACCACCGACCGTCCTTTTGGTATTGCGTATCTTCCAGTGGCATCTACATCCACTCCTCATCAAGATTCAATATCAACTACTTCCTTCCTCTTCTACCTTACAATTATATCTTCTAAACTCTTTCCATTATAATTTTTTCAATACACAAAACAAATCAAAATTATGCTGCTCAAAAGCTCTTCAACGCCGCTTCTTAGCTCTCTTCTCCCGCCGGACCACCACCACGACACCGTCCGAAAACACTCCTCCTCCCCTTCTCCTCCCCCCTTCGCCTTCCACTGCAATAACAAAACACTTTCTTTCTCCACCATTGCTTCTCTCAACTCCTCGCCTTCTTTCTCCGCCACTCCCACGGGCTTCCGGAGAACCCACTCCGAAGGAAATTTGAATACACTTTCCCATGCTCCCGATGTAATTGATGTCCATGAAGACCCCTTCTCCTTTGATTCCTTCAATTTCAAACCCTCCAACTCCCATAGCCTCAAACGCTCCCTTCTCCAGACTATACCCTCGTTTTCCTTCTACACCTCTAGAGCCAGGACTGAGGAAGATGATGACGACGATGATCAACATACTGATCCAGAGGAAGATGAAGATGGCTTGGGGAGTTTTGGCATTCAAAACAGGATGGTGACGGACGCTGCCATTGTAACTCCGGAGGTTAAGGCCATGGAGCACGCTTGGACTGATGGGATAGGGTTTGTGGGTGATTCACAGAAAGAGATGTATCTAACTAGTGAGCTAGGCATTGGAGGACAGGGGGATGGCGGCGGTGGTGGTCGACGGTGGAGTGGTGGCGGTGGTGGCGGAGGGGGTGAGCAACATGGCATGGAGGAGTATTACAAGAAAATGGTGATGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGAGGAGAGGAGACCTGCGAGGAGCAGAAGAGTATTACAGCAGAGCCATTTTGATGGATGCCCAAGATGGAGAAATTTTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTAACCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCTATGTGCAAGCTGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGACGAACACAGCTTAGGAAAAGGGATGGCAACACAGACTTACACGGCAGCCGCAACTAGCTTGAGATGAAAGTGATTGCCTATTGCTTTTTCTTGTTTCCTTCTTTGTAGAATAATCTCATCCTCACTGATAATAAACATTGTCGCAGCATTTTTAAAGTAGTTCCATGTTTCTGCAATGCAATGGACGTGAAGAAACAAACAAGAATAACAGAGAGGTAGTAGGGCAAAAGCAAATAAGTTCAGTATAAGATTTAATGAAAAAGATCATCTCTAAGTCTTTTTCCCTCACATTGCCTAACAAGTGCTTTTACTTGAAATGCCAAAATTTCCCCACTTGAATTGCATCTCAAAAACCATCCAAGGGGGAAAATTACCATCTTAACTTAATAATTAGTTCCTCACAAATTAACATTTTCAGTAACGTCAACTCACACGCTCAAAACACAAAGTACAAACCAATTCCCTAAACCACACACCGGAGACGCTTGCTTTCTTTGAACCATCAAACATAGTAACCACCTTCATATCAAAAACTCCTCCAAAGTTTCATCTCCATAATGGTTATGCACAAACAACTGGATGATTGATGATACTATTGAACCTTGTGGTAACCCCGCTGAGGGAAACCGTTGCCTCTCAACCGACCATAGTCACTGCCATCCTGGCTGCTTCCTCGACCCAAACTCCGAGAACCAAATCGTCCTCTTGGGGCCTCTGACTGGTAACTACCTCTCCCTCTTCCCCTTCCTGTTCATGGCACCAATAAATGCATCAGAAACTATCCATGAAAAGCCAATGCAAACAAATAATCTCAAGGAGGGTGGGAG

Coding sequence (CDS)

ATGCTGCTCAAAAGCTCTTCAACGCCGCTTCTTAGCTCTCTTCTCCCGCCGGACCACCACCACGACACCGTCCGAAAACACTCCTCCTCCCCTTCTCCTCCCCCCTTCGCCTTCCACTGCAATAACAAAACACTTTCTTTCTCCACCATTGCTTCTCTCAACTCCTCGCCTTCTTTCTCCGCCACTCCCACGGGCTTCCGGAGAACCCACTCCGAAGGAAATTTGAATACACTTTCCCATGCTCCCGATGTAATTGATGTCCATGAAGACCCCTTCTCCTTTGATTCCTTCAATTTCAAACCCTCCAACTCCCATAGCCTCAAACGCTCCCTTCTCCAGACTATACCCTCGTTTTCCTTCTACACCTCTAGAGCCAGGACTGAGGAAGATGATGACGACGATGATCAACATACTGATCCAGAGGAAGATGAAGATGGCTTGGGGAGTTTTGGCATTCAAAACAGGATGGTGACGGACGCTGCCATTGTAACTCCGGAGGTTAAGGCCATGGAGCACGCTTGGACTGATGGGATAGGGTTTGTGGGTGATTCACAGAAAGAGATGTATCTAACTAGTGAGCTAGGCATTGGAGGACAGGGGGATGGCGGCGGTGGTGGTCGACGGTGGAGTGGTGGCGGTGGTGGCGGAGGGGGTGAGCAACATGGCATGGAGGAGTATTACAAGAAAATGGTGATGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGAGGAGAGGAGACCTGCGAGGAGCAGAAGAGTATTACAGCAGAGCCATTTTGATGGATGCCCAAGATGGAGAAATTTTGTCAAAATATGCTAAGTTAGTGTGGGAGTTGCATCATGACCAACAAAAAGCTTTAACCTATTTCCAACGGGCTCTCCAAGCTTCTCCACATGACAGCTATGTGCAAGCTGCCTATGCCAATTTCCTGTGGGAAACAGAAGAGGATGAAGACGAACACAGCTTAGGAAAAGGGATGGCAACACAGACTTACACGGCAGCCGCAACTAGCTTGAGATGA

Protein sequence

MLLKSSSTPLLSSLLPPDHHHDTVRKHSSSPSPPPFAFHCNNKTLSFSTIASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSNSHSLKRSLLQTIPSFSFYTSRARTEEDDDDDDQHTDPEEDEDGLGSFGIQNRMVTDAAIVTPEVKAMEHAWTDGIGFVGDSQKEMYLTSELGIGGQGDGGGGGRRWSGGGGGGGGEQHGMEEYYKKMVMENPGNALVLSNYAEFLYQRRGDLRGAEEYYSRAILMDAQDGEILSKYAKLVWELHHDQQKALTYFQRALQASPHDSYVQAAYANFLWETEEDEDEHSLGKGMATQTYTAAATSLR

Homology

[Close]

BLAST of Bhi12G002086 vs. TrEMBL
Match: tr|A0A0A0KA70|A0A0A0KA70_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 4.2e-48
Identity = 170/232 (73.28%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 36  FAFHCNNKTLSFS-TIASLNSSPSFS-----ATPTGFRRTHSEGNLNTLSHAPDVIDVHE 95
           F FHCNNK LSFS T ASL+SSP+FS     A P+GFRRT+SEGNLNT+SHA DVIDVHE
Sbjct: 33  FPFHCNNKPLSFSTTTASLSSSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHE 92

Query: 96  DPFSFDSFNFKPSNS--HSLKRSLLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGL 155
           DPFSFDS NFK S    H LKRS+LQTIPSFSFY SR XXXXXXXXXXXXXX      GL
Sbjct: 93  DPFSFDSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGL 152

Query: 156 GSFGIQNRMVTDAAIVTPEVKAMEHAWT------DGIGFVGDSQKEMYLTSELGIG-GQG 215
           G+F I      DAAIVTPEV+AME AW+      DG+GFVGD +KEMYL   LGIG    
Sbjct: 153 GNFSI------DAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXX 212

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ENP NALVLSNYAEFLYQR+
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPSNALVLSNYAEFLYQRK 258

[Close]

BLAST of Bhi12G002086 vs. TrEMBL
Match: tr|A0A1S3CCM7|A0A1S3CCM7_CUCME (uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.1e-45
Identity = 173/233 (74.25%), Postives = 188/233 (80.69%), Query Frame = 0


Query: 36  FAFHCNNKTLSFS-TIASLNSSPSFS-----ATPTGFRRTHSEGNLNTLSHAPDVIDVHE 95
           F FHCNNK LSFS T ASLNSSPSFS       P+GFRRT+SEGNLNT+SHA +VIDVHE
Sbjct: 35  FPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHE 94

Query: 96  DPFSFDSFNFKPSN--SHSLKRSLLQTIPSFSFYTSR-XXXXXXXXXXXXXXXXXXXXXG 155
           DPFS DS NFK SN  S  LKRS+LQTIPSFSFY SR  XXXXXXXXXXXXXXXXXXXX 
Sbjct: 95  DPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRXXXXXXXXXXXXXXXXXXXXX 154

Query: 156 LGSFGIQNRMVTDAAIVTPEVKAMEHAWT------DGIGFVGDSQKEMYLTSELGIG-GQ 215
           LG+FGI      +AA++TPEV+AME AW+      DGIGFVGD +KEMYL   LGIG   
Sbjct: 155 LGNFGI------NAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGXXX 214

Query: 216 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ENPGNALVLSNYAEFLY+R+
Sbjct: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVENPGNALVLSNYAEFLYKRK 261

[Close]

BLAST of Bhi12G002086 vs. TrEMBL
Match: tr|A0A1Q3D6W5|A0A1Q3D6W5_CEPFO (TPR_11 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_31412 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.1e-07
Identity = 77/240 (32.08%), Postives = 98/240 (40.83%), Query Frame = 0


Query: 36  FAFH-----CNNKTLSFSTIASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHED 95
           F+FH     CN+  +S ST  S NSS          RR  S+GNL  L+HA    +V E 
Sbjct: 138 FSFHLAKAFCNSSPISPSTAESHNSS---------IRRAQSDGNLEGLAHASCNKNVEE- 197

Query: 96  PFSFDSFNFKPSNSHSLKRSLLQTIPSFSFYTSR--------------XXXXXXXXXXXX 155
              F   N     +   KR +LQTIPSFS Y SR              XXXXXX      
Sbjct: 198 ---FYDTNQPNKFAARKKRFMLQTIPSFSIYNSRSGREXXXXXXXXXXXXXXXXLFDRKG 257

Query: 156 XXXXXXXXXGLGSFGIQNRMVTDAAIVTPEVKAMEHAWTDGIGFVGDSQKEMYLTSELGI 215
                      G FG++N M     +++ EVKA +  W   + F  ++ +EM+L   LGI
Sbjct: 258 SSGERVTATDGGGFGLENVMA--HMVLSEEVKAKDGVW--NVAFGEETSQEMHLARGLGI 317

Query: 216 ----GGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
               GG G                                ENPGN L L NYA+ LYQ +
Sbjct: 318 AHTSGGGGDHNPASSGGDVGDNHSVEQYFKRMME------ENPGNPLFLRNYAQLLYQSK 354

[Close]

BLAST of Bhi12G002086 vs. TrEMBL
Match: tr|A0A2H5NJ79|A0A2H5NJ79_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_050400 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 99/208 (47.60%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 51  ASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSNSHSLKRS 110
           +S  SSPS  A   G RR  SEGNL  L+HA    D  E  +  +  N         K S
Sbjct: 68  SSPRSSPSV-ADHKGIRRAQSEGNLAGLAHA-SCKDEEEHLYKANQPNSNKRVLGRYKCS 127

Query: 111 LLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGLGSFGIQNRMVTDAAIVTPEVKAM 170
           +L++IPSFS     XXXXXXXXXXXXXXXXXXXXX    F + N M   A  ++ EVK M
Sbjct: 128 VLKSIPSFS-SVDXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGMAGTA--LSEEVKVM 187

Query: 171 EHAWTDGI----GFVGDSQKEMYLTSELGIGGQGXXXXXXXXXXXXXXXXXXXXXXXXXX 230
           E  W  G     G VG   +EMYL   LG+G   XXXXXXXXXXXXX             
Sbjct: 188 EALWNVGFEQERGTVG---QEMYLAKGLGVGXXXXXXXXXXXXXXXXYPAGSGGDSQGVE 247

Query: 231 XXXXXM--ENPGNALVLSNYAEFLYQRR 253
                M  ENPGN L LSNYA+FLYQ +
Sbjct: 248 EYYKKMVEENPGNPLFLSNYAQFLYQSK 267

[Close]

BLAST of Bhi12G002086 vs. TrEMBL
Match: tr|V4VUN7|V4VUN7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020687mg PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-05
Identity = 109/212 (51.42%), Postives = 125/212 (58.96%), Query Frame = 0


Query: 51  ASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSNSHSLKRS 110
           +S  SSPS +A   G RR  SEGNL  L+HA    D  E  ++ +  N         K S
Sbjct: 68  SSPRSSPS-AADHKGIRRAQSEGNLAGLAHA-SCKDEEEHLYNANQPNSNKRVLGRYKCS 127

Query: 111 LLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGLGSFGIQNRMVTDAAIVTPEVKAM 170
           +L++IPSFS     XXXXXXXXXXXXXXXXXXXXX    F + N M   A  ++ EVK M
Sbjct: 128 VLKSIPSFS-SVDXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGMAGTA--LSEEVKVM 187

Query: 171 EHAWTDGI----GFVGDSQKEMYLTSELGIGGQGXXXXXXXXXXXXXXXXXXXXXXXXXX 230
           E  W  G     G VG   +EMYL   LG+GG  XXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 188 EALWNVGFEEERGTVG---QEMYLAKGLGVGGXXXXXXXXXXXXXXXXXXXXXXXXXGDS 247

Query: 231 XXXXXM------ENPGNALVLSNYAEFLYQRR 253
                       ENPGN L LSNYA+FLYQ +
Sbjct: 248 QGVEEYYKKMVEENPGNPLFLSNYAQFLYQSK 271

[Close]

BLAST of Bhi12G002086 vs. NCBI nr
Match: KGN46373.1 (hypothetical protein Csa_6G088010 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 6.3e-48
Identity = 170/232 (73.28%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 36  FAFHCNNKTLSFS-TIASLNSSPSFS-----ATPTGFRRTHSEGNLNTLSHAPDVIDVHE 95
           F FHCNNK LSFS T ASL+SSP+FS     A P+GFRRT+SEGNLNT+SHA DVIDVHE
Sbjct: 33  FPFHCNNKPLSFSTTTASLSSSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHE 92

Query: 96  DPFSFDSFNFKPSNS--HSLKRSLLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGL 155
           DPFSFDS NFK S    H LKRS+LQTIPSFSFY SR XXXXXXXXXXXXXX      GL
Sbjct: 93  DPFSFDSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGL 152

Query: 156 GSFGIQNRMVTDAAIVTPEVKAMEHAWT------DGIGFVGDSQKEMYLTSELGIG-GQG 215
           G+F I      DAAIVTPEV+AME AW+      DG+GFVGD +KEMYL   LGIG    
Sbjct: 153 GNFSI------DAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXX 212

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ENP NALVLSNYAEFLYQR+
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPSNALVLSNYAEFLYQRK 258

[Close]

BLAST of Bhi12G002086 vs. NCBI nr
Match: XP_004140576.2 (PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus])

HSP 1 Score: 201.1 bits (510), Expect = 6.3e-48
Identity = 170/232 (73.28%), Postives = 182/232 (78.45%), Query Frame = 0


Query: 36  FAFHCNNKTLSFS-TIASLNSSPSFS-----ATPTGFRRTHSEGNLNTLSHAPDVIDVHE 95
           F FHCNNK LSFS T ASL+SSP+FS     A P+GFRRT+SEGNLNT+SHA DVIDVHE
Sbjct: 33  FPFHCNNKPLSFSTTTASLSSSPAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHE 92

Query: 96  DPFSFDSFNFKPSNS--HSLKRSLLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGL 155
           DPFSFDS NFK S    H LKRS+LQTIPSFSFY SR XXXXXXXXXXXXXX      GL
Sbjct: 93  DPFSFDSVNFKSSKKFCHGLKRSILQTIPSFSFYGSRAXXXXXXXXXXXXXXGKEEEDGL 152

Query: 156 GSFGIQNRMVTDAAIVTPEVKAMEHAWT------DGIGFVGDSQKEMYLTSELGIG-GQG 215
           G+F I      DAAIVTPEV+AME AW+      DG+GFVGD +KEMYL   LGIG    
Sbjct: 153 GNFSI------DAAIVTPEVRAMEQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGXXXX 212

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ENP NALVLSNYAEFLYQR+
Sbjct: 213 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPSNALVLSNYAEFLYQRK 258

[Close]

BLAST of Bhi12G002086 vs. NCBI nr
Match: XP_008459965.1 (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-45
Identity = 173/233 (74.25%), Postives = 188/233 (80.69%), Query Frame = 0


Query: 36  FAFHCNNKTLSFS-TIASLNSSPSFS-----ATPTGFRRTHSEGNLNTLSHAPDVIDVHE 95
           F FHCNNK LSFS T ASLNSSPSFS       P+GFRRT+SEGNLNT+SHA +VIDVHE
Sbjct: 35  FPFHCNNKPLSFSTTTASLNSSPSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHE 94

Query: 96  DPFSFDSFNFKPSN--SHSLKRSLLQTIPSFSFYTSR-XXXXXXXXXXXXXXXXXXXXXG 155
           DPFS DS NFK SN  S  LKRS+LQTIPSFSFY SR  XXXXXXXXXXXXXXXXXXXX 
Sbjct: 95  DPFSSDSVNFKSSNKFSRGLKRSVLQTIPSFSFYGSRVRXXXXXXXXXXXXXXXXXXXXX 154

Query: 156 LGSFGIQNRMVTDAAIVTPEVKAMEHAWT------DGIGFVGDSQKEMYLTSELGIG-GQ 215
           LG+FGI      +AA++TPEV+AME AW+      DGIGFVGD +KEMYL   LGIG   
Sbjct: 155 LGNFGI------NAAVITPEVRAMEQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGXXX 214

Query: 216 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ENPGNALVLSNYAEFLY+R+
Sbjct: 215 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVENPGNALVLSNYAEFLYKRK 261

[Close]

BLAST of Bhi12G002086 vs. NCBI nr
Match: GAV87988.1 (TPR_11 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-07
Identity = 77/240 (32.08%), Postives = 98/240 (40.83%), Query Frame = 0


Query: 36  FAFH-----CNNKTLSFSTIASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHED 95
           F+FH     CN+  +S ST  S NSS          RR  S+GNL  L+HA    +V E 
Sbjct: 138 FSFHLAKAFCNSSPISPSTAESHNSS---------IRRAQSDGNLEGLAHASCNKNVEE- 197

Query: 96  PFSFDSFNFKPSNSHSLKRSLLQTIPSFSFYTSR--------------XXXXXXXXXXXX 155
              F   N     +   KR +LQTIPSFS Y SR              XXXXXX      
Sbjct: 198 ---FYDTNQPNKFAARKKRFMLQTIPSFSIYNSRSGREXXXXXXXXXXXXXXXXLFDRKG 257

Query: 156 XXXXXXXXXGLGSFGIQNRMVTDAAIVTPEVKAMEHAWTDGIGFVGDSQKEMYLTSELGI 215
                      G FG++N M     +++ EVKA +  W   + F  ++ +EM+L   LGI
Sbjct: 258 SSGERVTATDGGGFGLENVMA--HMVLSEEVKAKDGVW--NVAFGEETSQEMHLARGLGI 317

Query: 216 ----GGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMENPGNALVLSNYAEFLYQRR 253
               GG G                                ENPGN L L NYA+ LYQ +
Sbjct: 318 AHTSGGGGDHNPASSGGDVGDNHSVEQYFKRMME------ENPGNPLFLRNYAQLLYQSK 354

[Close]

BLAST of Bhi12G002086 vs. NCBI nr
Match: GAY40229.1 (hypothetical protein CUMW_050400 [Citrus unshiu])

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-05
Identity = 99/208 (47.60%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 51  ASLNSSPSFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSNSHSLKRS 110
           +S  SSPS  A   G RR  SEGNL  L+HA    D  E  +  +  N         K S
Sbjct: 68  SSPRSSPSV-ADHKGIRRAQSEGNLAGLAHA-SCKDEEEHLYKANQPNSNKRVLGRYKCS 127

Query: 111 LLQTIPSFSFYTSRXXXXXXXXXXXXXXXXXXXXXGLGSFGIQNRMVTDAAIVTPEVKAM 170
           +L++IPSFS     XXXXXXXXXXXXXXXXXXXXX    F + N M   A  ++ EVK M
Sbjct: 128 VLKSIPSFS-SVDXXXXXXXXXXXXXXXXXXXXXXXXXEFRLNNGMAGTA--LSEEVKVM 187

Query: 171 EHAWTDGI----GFVGDSQKEMYLTSELGIGGQGXXXXXXXXXXXXXXXXXXXXXXXXXX 230
           E  W  G     G VG   +EMYL   LG+G   XXXXXXXXXXXXX             
Sbjct: 188 EALWNVGFEQERGTVG---QEMYLAKGLGVGXXXXXXXXXXXXXXXXYPAGSGGDSQGVE 247

Query: 231 XXXXXM--ENPGNALVLSNYAEFLYQRR 253
                M  ENPGN L LSNYA+FLYQ +
Sbjct: 248 EYYKKMVEENPGNPLFLSNYAQFLYQSK 267

The following BLAST results are available for this feature:

BLAST of Bhi12G002086 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Bhi12G002086 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Bhi12G002086 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KA70\|A0A0A0KA70_CUCSA	4.2e-48	73.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1	[more]
tr\|A0A1S3CCM7\|A0A1S3CCM7_CUCME	1.1e-45	74.25	uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=...	[more]
tr\|A0A1Q3D6W5\|A0A1Q3D6W5_CEPFO	2.1e-07	32.08	TPR_11 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_3...	[more]
tr\|A0A2H5NJ79\|A0A2H5NJ79_CITUN	1.5e-05	47.60	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_050400 PE=4 SV=1	[more]
tr\|V4VUN7\|V4VUN7_9ROSI	2.0e-05	51.42	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10020687mg PE=4 ...	[more]

BLAST of Bhi12G002086 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46373.1	6.3e-48	73.28	hypothetical protein Csa_6G088010 [Cucumis sativus]	[more]
XP_004140576.2	6.3e-48	73.28	PREDICTED: uncharacterized protein LOC101206684 [Cucumis sativus]	[more]
XP_008459965.1	1.7e-45	74.25	PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]	[more]
GAV87988.1	3.2e-07	32.08	TPR_11 domain-containing protein [Cephalotus follicularis]	[more]
GAY40229.1	2.3e-05	47.60	hypothetical protein CUMW_050400 [Citrus unshiu]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf
IPR003107	HAT

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi12M002086	Bhi12M002086	mRNA

InterPro

Analysis Name: InterPro Annotations of wax gourd
Date Performed: 2019-11-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 218..250 e-value: 90.0 score: 8.4 coord: 288..320 e-value: 69.0 score: 9.3 coord: 253..285 e-value: 34.0 score: 11.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 218..345 e-value: 4.1E-14 score: 54.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 225..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..151
None	No IPR available	PANTHER	PTHR26312:SF89	CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN	coord: 1..332
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 1..332
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 225..307 score: 12.528

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Bhi12G002086	Csa6G088010	Cucumber (Chinese Long) v2	cuwgoB533
Bhi12G002086	MELO3C022390	Melon (DHL92) v3.5.1	mewgoB099
Bhi12G002086	ClCG06G001430	Watermelon (Charleston Gray)	wcgwgoB491
Bhi12G002086	CSPI06G07000	Wild cucumber (PI 183967)	cpiwgoB537
Bhi12G002086	Cucsa.348890	Cucumber (Gy14) v1	cgywgoB696
Bhi12G002086	CmaCh17G013720	Cucurbita maxima (Rimu)	cmawgoB0456
Bhi12G002086	CmoCh17G013260	Cucurbita moschata (Rifu)	cmowgoB0456
Bhi12G002086	Lsi09G017980	Bottle gourd (USVL1VR-Ls)	lsiwgoB021
Bhi12G002086	Cp4.1LG12g10270	Cucurbita pepo (Zucchini)	cpewgoB0175
Bhi12G002086	CsGy6G007030	Cucumber (Gy14) v2	cgybwgoB509
Bhi12G002086	MELO3C022390.2	Melon (DHL92) v3.6.1	medwgoB100
Bhi12G002086	Carg11540	Silver-seed gourd	carwgoB0013
Bhi12G002086	CsaV3_6G007370	Cucumber (Chinese Long) v3	cucwgoB549
Bhi12G002086	Cla007065	Watermelon (97103) v1	wgowmB092
Bhi12G002086	Cla97C06G110730	Watermelon (97103) v2	wgowmbB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Bhi12G002086	Cucurbita maxima (Rimu)	cmawgoB1096
Bhi12G002086	Cucurbita moschata (Rifu)	cmowgoB1091
Bhi12G002086	Cucurbita pepo (Zucchini)	cpewgoB0389
Bhi12G002086	Silver-seed gourd	carwgoB1141