Cucsa.327700 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.327700
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	6,7-dimethyl-8-ribityllumazine synthase
Location	scaffold03159 : 53080 .. 57071 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGAATAGGTAAAGTTCAAATTGCGTTAATATAAAAAGGATGCTATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTCATTTCTCTTTTCTCTTTTCTTTTTGTTGTTTTTTTCTCCCTCTTCTTCTAATTCATGATGTTTTGTTCGTTCTCTAGGGTACTTAGCCGTTTTTGTTCATCATTTTGAACTCTCAAGTTGTTTTTCCTTATCGTTTACCTAAAAACGTGTAGTAAATATAATGACGTCTCGTCTGAGGATTTATTCGCTTCTAAGCACCGTTCTATTGATTTGTTGCCTGCATTCAATTCAAAGATTATGCGACAATGATTAATATCTGTGATGTATTAAATTGAACTTCTTACAATTTTTGTCCATTCGGCTGTTCTTGTGACTTCTGTTATCATGAATCTAAACTGtAGTTTTTTTTTTTTTttGTTTACTCCCTTGTCATTTCTGTGTGTGGACTCGTGGGATTTAATCATAACATCAATGTTTATTCATGTTTGCATATCTTGTTAATGGGTTTTTGATTATTGAAAGAATTGTTTTGCTTTGATGAAGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTAAGTGTTTCATTATACAACATGTGAAACTCGCATCCTCTAGTGTTTTGCTAGTGTTGGAAACTGAGATTCATTTATTTTAATTAATCAAAACAGAAAACAGGTTCATGACCCCGTTAAGCATATGCCAAGCAAAGCAAGCTTGTGAATAAATATGTTTGGAACTAGCATTGTTTTAAAAGACTACTGAGACTCACGCCTCGAGGCCCACCTTGAGGCATGACTCTAACTTGTAGCCTTGAGACAAACACCTTCTTTGAATAAAAAGAGGGAAGCCACTTGTGGAAACACACCGTTGATCTAAGTCTCTACACGTCTAGTGATTTGAAGAATAATATGAATTTCTCTCTCTTATGAAATTTGAATGTTGAGTTCTGATAATTTGAACATTTTATATTTTTAATGATATTAACAGTGATGCTAAAGATGTCCTAAAATTTTTGTTTAAGTGGGAATTGACGAGAGTGGTTTTTTtAATATACTTTTATATGACTATTATGTTTAGCTATACTTTGTCGAATCAGTTCAAGATTTGTAAAATGTTTTTAGTTAAATTAGAAGTTGCCTCCTTGCCTCTTAGGAAGGGTCTAAAGTTGGCTTTTTAAAACATTGGAAACTAGATTTTGTGCTTGTCAGGAGTATAAGTAAACAAATTTAACTACATATTGTGGGTACAAGTAAAaTAGGGTGGCTGAATTTCATTGGCAGACAAGTAGAATACACCTTTCATCAGATTTGCATTGAGAGAGAACGTGTATCTGACCTTGCTAGTTGACAAACAGCTTAACTTTGCTTGACATATTGACTTTATTATTTACCTCGCTATCATATTAGGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGGTATGATTTTCTGTAACATTTATCAAGTCCTTTTATATATTCTAGTCTTCAGTGCATTTATTAATACCATGACCCATTTCATTATGATAGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGTTGGCTTTCTTTTTTTGGTAGTTTTGCAGAACGTTATATACTTTTATCCTATTAATTTAAGTTTTCTAACCAATTTTTGTTCTGTATTGCCTATCTTTTATGAGTTCAACTCAAGGCTTTTGATTTGCCATCATTTCTAGGAGTTTCTAAATTCTAAATATTGCAGTCGAGTTGACTTAACTATTCCAATTTTGACATCTATGAACCATGAGGGATTTAAGGAATATTGGGGTATGAAGAGGACAAGAAGCACCTGGTTGTTATAGATTTATATAAATTATGTGATTATGTGCACATTCCCAGCCTTTTATTGAAGAAAAAaTATTGGTTTCCCCGGTTAAAGCTTAACATTAATTTCATATGATAACATCAAAGGCCTTGGTTATTGGTCGAAGTATTTCCTTTTTATAATGGAACAGCAAGATTATAGGTTATATTTCAGTGAATCAAGACCCCTTTTAAAGCATTTCAATCTAAGCCTTAGTAATAGTTTGAGTTGTGGAACAATAATATGTTTAAGCTGTTGGGACTTGGGAGCTATAGTGAACTATGTTCTTGTATAACCGACATGAGAATATCTTTTACTCCTTATATGTGAAAACCTGTGTTAAAATTGTTGATAGTAATCTCTGTAACCGTATTTTTAGAGAAGTACCATTTATATCAATGCTTCCATCTTAGTTCTACTCTTTCTTCATCTTTGAGTTGTTGCTACATGAAGCTAAAGCCATTTTCTTATGCCTATGTAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGTAAATATGATCTAAACTGACTGTTACAAGTATTTTCCTGCCTAGAGAATTGTTCTCAAAGGAGCTATGTGATTTCTGGTCATTACGTGCTTTTCACCACTTTTTAATTTGTGTGAAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTGTAAGTTTTTTtAGTTAGTTTATAGTGTTCAAACCGTTGATTGTTCTAAGAAAAGAGACTGATTACTAACATATTTACTTTTCAAACGGTTTGCCAAAGCAGAAGTATACAGGAAAATTGTCTAATATGTGAACAAAAAGCACTAAATTCCTTTTCTTTCATGCGTATATATAGGTTTATATTTGACTGAATTTTATTGTCATTTGCAAGTGGTACCGCTAGGAATAGGATTTATCTTTTTAAACTTTATGATTATTATAATTATTTCCGATTTGTGAATCTTTTGTTATAAGATTTTGCATCATTTTGGCCAATTTTTCTCTTCTTCTACAGATGGAGCTGGCATCTATGTTTGAGCACGATCTGAAGTAGTCGAGATATAAGATCTAACAATTTCCATTATCCTTAGTTTTGCGGTTTCTTGCATTTCCCTGCTGTCCTTAGTAATGGTAGAATGCTTTCATTAAAAAAAAAAaaGAAGCCACATGATGGCTCAAACTGAAGTCAGCTGCAACTGGTCCAGAGGAAGTAGGAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTGCTCAGCTTTGCCTTTTAACCGTTTATGTCAGAATAATGATATGAGGAATTTTATTTGTGGCATTGTGTGATTTGTGATGCACAATTAACAGAGTTTATATTATTGAAGAAGCCTTGGTGAATCATTAGTAAGTTCAACTCAGGGTGCTTTGATATTGATATTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACTCATTTGATTTTTTTCCCTGAAGACTGGAGCTGCTACAGCTTCCTTTCAAATCTCTTTCATTTCTCTCTTCTAATTAGTGTAAAACCGAGACATATGAGCCAATGTCTCGTTGAAACATACGTGGTCGATA

mRNA sequence

TGGAGAATAGGTAAAGTTCAAATTGCGTTAATATAAAAAGGATGCTATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGcttcttcttcttcttcttcttcttcttcttcttcttcttcttcGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTATGGAGCTGGCATCTATGTTTGAGCACGATCTGAAGTAGTCGAGATATAAGATCTAACAATTTCCATTATCCTTAGTTTTGCGGTTTCTTGCATTTCCCTGCTGTCCTTAGTAATGGTAGAATGCTTTCATTAAAAAAAAAAAAGAAGCCACATGATGGCTCAAACTGAAGTCAGCTGCAACTGGTCCAGAGGAAGTAGGAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTGCTCAGCTTTGCCTTTTAACCGTTTATGTCAGAATAATGATATGAGGAATTTTATTTGTGGCATTGTGTGATTTGTGATGCACAATTAACAGAGTTTATATTATTGAAGAAGCCTTGGTGAATCATTAGTAAGTTCAACTCAGGGTGCTTTGATATTGATATTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACTCATTTGATTTTTTTCCCTGAAGACTGGAGCTGCTACAGCTTCCTTTCAAATCTCTTTCATTTCTCTCTTCTAATTAGTGTAAAACCGAGACATATGAGCCAATGTCTCGTTGAAACATACGTGGTCGATA

Coding sequence (CDS)

ATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTATGGAGCTGGCATCTATGTTTGAGCACGATCTGAAGTAG

Protein sequence

MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK*

Homology

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BLAST of Cucsa.327700 vs. Swiss-Prot
Match: RISB_ARATH (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g44050 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 9.3e-67
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 1


Query: 77  GTLSAKSQPLSFSSQFNLLNHPSSPNNH-RSSFAHTAAVRHIAGSLAKAGGLRFAVVVGR 136
           G+   KS  LSFSS  +    P +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 137 FNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAV 196
           FNE+VT+ +LEGA+ TFK YSV++EDI+V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 197 IRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 256
           IRGDT+HYDAV N +ASGVLSA +NSGVPCIF VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 257 TAMELASMFEHDLK 270
           TA+E+AS+FEH LK
Sbjct: 214 TALEMASLFEHHLK 227

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BLAST of Cucsa.327700 vs. Swiss-Prot
Match: RISB_SPIOL (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.9e-64
Identity = 132/228 (57.89%), Postives = 163/228 (71.49%), Query Frame = 1


Query: 44  ASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNL--LNHPSSP 103
           ASFAA        Q   L+ +    KP   Q   T    S PLS SS F    L H +S 
Sbjct: 2   ASFAAS-------QTCFLTTNPTCLKPNSPQKSSTFLPFSAPLSSSSSFPGCGLVHVASN 61

Query: 104 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 163
             +R+SF  T AVR + G + KA   RFA+VV RFNE VTR ++EGAL TFK YSV +ED
Sbjct: 62  KKNRASFVVTNAVRELEGYVTKAQSFRFAIVVARFNEFVTRRLMEGALDTFKKYSV-NED 121

Query: 164 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 223
           IDVVWVPG++++ V AQ LG+SGKYHA++C+GAV++GDTSHYDAVVN ++SGVLSAGLNS
Sbjct: 122 IDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNS 181

Query: 224 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPC+F VLTCD ++Q  +RAGGK GNKG+E ALTA+E+AS+FEH LK
Sbjct: 182 GVPCVFGVLTCDNMDQAINRAGGKAGNKGAESALTAIEMASLFEHHLK 221

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BLAST of Cucsa.327700 vs. Swiss-Prot
Match: RISB_PELTS (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ribH PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.4e-38
Identity = 73/140 (52.14%), Postives = 101/140 (72.14%), Query Frame = 1


Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GLRF +V+GRFNE +T  +L GAL     + V D+DI+V WVPG+F+IP+VA+++  + K
Sbjct: 13  GLRFGIVIGRFNEFITNKLLSGALDALNRHGVADQDIEVAWVPGAFEIPMVARKMASAMK 72

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y AV+C+GAVIRG T H+D V    A GV   GL SGVP IF V+T D++EQ  +RAG K
Sbjct: 73  YDAVICLGAVIRGATPHFDYVAGEVAKGVARIGLESGVPTIFGVITADSIEQAIERAGAK 132

Query: 246 VGNKGSEGALTAMELASMFE 266
            GNKG + A+TA+E+A++ +
Sbjct: 133 AGNKGWDAAVTAIEMANLMK 152

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BLAST of Cucsa.327700 vs. Swiss-Prot
Match: RISB_CLOB8 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=ribH PE=3 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37
Identity = 71/138 (51.45%), Postives = 103/138 (74.64%), Query Frame = 1


Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GL+F +VVGRFNE +   +LEGA+   K + V++EDID+ WVPG+F+IP++A+++ +S K
Sbjct: 12  GLKFGIVVGRFNEFIGGKLLEGAIDGLKRHGVKEEDIDIAWVPGAFEIPLIAKKMAKSPK 71

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y  V+C+GAVI+G TSHYD V +  + G+ S  L SG P IF VLT +T+EQ  +RAG K
Sbjct: 72  YDGVICLGAVIKGSTSHYDYVCSEVSKGIASVSLESGKPVIFGVLTTNTIEQAIERAGTK 131

Query: 246 VGNKGSEGALTAMELASM 264
            GNKG E A++A+E+A++
Sbjct: 132 AGNKGYESAVSAIEMANL 149

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BLAST of Cucsa.327700 vs. Swiss-Prot
Match: RISB_ANOFW (6,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=ribH PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-37
Identity = 76/138 (55.07%), Postives = 101/138 (73.19%), Query Frame = 1


Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GL+  +VV RFNE +T  +L GAL   K + V+++ IDV WVPG+F+IP+VA+++ +S K
Sbjct: 12  GLKIGIVVARFNEFITSKLLSGALDGLKRHGVEEQHIDVAWVPGAFEIPLVAKKMAESKK 71

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y AV+ +GAVIRG TSHYD V N  A G   A L+SGVP IF VLT DT+EQ  +RAG K
Sbjct: 72  YDAVITLGAVIRGATSHYDYVCNEVAKGTSHAALSSGVPVIFGVLTTDTIEQAIERAGTK 131

Query: 246 VGNKGSEGALTAMELASM 264
            GNKG E AL+A+E+A++
Sbjct: 132 AGNKGWEAALSAIEMANV 149

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BLAST of Cucsa.327700 vs. TrEMBL
Match: A0A0A0KGW6_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus GN=Csa_6G366300 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.2e-142
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 1


Query: 1   MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60
           MCMYVYIGIILIAKVKP      SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT
Sbjct: 1   MCMYVYIGIILIAKVKP------SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60

Query: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120
           LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS
Sbjct: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120

Query: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180
           LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL
Sbjct: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180

Query: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240
           GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD
Sbjct: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240

Query: 241 RAGGKVGNKGSEGALTAMELASMFEHDLK 270
           RAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 241 RAGGKVGNKGSEGALTAMELASMFEHDLK 263

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BLAST of Cucsa.327700 vs. TrEMBL
Match: E7BRS1_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=3 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 6.8e-125
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

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BLAST of Cucsa.327700 vs. TrEMBL
Match: B7SIS4_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.3e-123
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTL AKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTS+YDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

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BLAST of Cucsa.327700 vs. TrEMBL
Match: L0C9N6_MOMCH (6,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 8.9e-101
Identity = 188/228 (82.46%), Postives = 203/228 (89.04%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFA+PAQGL+HRQ+L ++F+  NF  TQLQF G   AKSQPLSFSSQ  L N  S  
Sbjct: 1   MAASFASPAQGLLHRQHLPIAFTTSNFNRTQLQFHGATPAKSQPLSFSSQLKLSNDASPR 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           N+HRSSFA TAAVRHI GSL+KA GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NDHRSSFAQTAAVRHIVGSLSKAEGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVA+RLG SGKYHA+LCIGAVI+GDTSHYDAVVN +ASGVLSAGL S
Sbjct: 121 IDVVWVPGSFDIPVVAERLGNSGKYHAILCIGAVIKGDTSHYDAVVNSTASGVLSAGLKS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPC+FSVLTCD L+Q F+RAGGK GNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCVFSVLTCDNLDQAFNRAGGKSGNKGSEGALTAMELASMFEHDLK 228

[Close]

BLAST of Cucsa.327700 vs. TrEMBL
Match: U5FG99_POPTR (6,7-dimethyl-8-ribityllumazine synthase OS=Populus trichocarpa GN=POPTR_0017s00360g PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-68
Identity = 136/230 (59.13%), Postives = 167/230 (72.61%), Query Frame = 1


Query: 40  LIMAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPS 99
           ++++AS        VH  +   SFS    KPTQL F  + S      S   +        
Sbjct: 2   VLLSASTKDLLSNAVHFHHQNRSFSPLYHKPTQLSFSSSSSIGFGTTSIGFE-------- 61

Query: 100 SPNNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQD 159
                RSS   TAAVRH+ GS+ K  G RFA+VV RFNEI+TRP+LEGA++TFK YSV++
Sbjct: 62  --RKERSSIVETAAVRHLEGSVTKTEGFRFALVVARFNEIITRPLLEGAVATFKKYSVKE 121

Query: 160 EDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGL 219
           EDIDVVWVPGSF+I +VA+RLG+SGKYHAV+CIGAV+RGDT+HYDAV N +ASGVLSAGL
Sbjct: 122 EDIDVVWVPGSFEIGIVAERLGKSGKYHAVVCIGAVVRGDTTHYDAVANSAASGVLSAGL 181

Query: 220 NSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           NSGVPCIF VLTC+ +EQ  +RAGGK GNKG+E ALTA+E+AS+FEH LK
Sbjct: 182 NSGVPCIFGVLTCEDMEQAINRAGGKSGNKGAEAALTAIEMASLFEHHLK 221

[Close]

BLAST of Cucsa.327700 vs. TAIR10
Match: AT2G44050.1 (AT2G44050.1 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase)

HSP 1 Score: 255.0 bits (650), Expect = 5.2e-68
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = 1


Query: 77  GTLSAKSQPLSFSSQFNLLNHPSSPNNH-RSSFAHTAAVRHIAGSLAKAGGLRFAVVVGR 136
           G+   KS  LSFSS  +    P +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 137 FNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAV 196
           FNE+VT+ +LEGA+ TFK YSV++EDI+V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 197 IRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 256
           IRGDT+HYDAV N +ASGVLSA +NSGVPCIF VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 257 TAMELASMFEHDLK 270
           TA+E+AS+FEH LK
Sbjct: 214 TALEMASLFEHHLK 227

[Close]

BLAST of Cucsa.327700 vs. NCBI nr
Match: gi|700192428|gb|KGN47632.1| (6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 513.8 bits (1322), Expect = 1.8e-142
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 1


Query: 1   MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60
           MCMYVYIGIILIAKVKP      SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT
Sbjct: 1   MCMYVYIGIILIAKVKP------SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60

Query: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120
           LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS
Sbjct: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120

Query: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180
           LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL
Sbjct: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180

Query: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240
           GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD
Sbjct: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240

Query: 241 RAGGKVGNKGSEGALTAMELASMFEHDLK 270
           RAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 241 RAGGKVGNKGSEGALTAMELASMFEHDLK 263

[Close]

BLAST of Cucsa.327700 vs. NCBI nr
Match: gi|311701739|gb|ADQ00634.1| (6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 454.9 bits (1169), Expect = 9.8e-125
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

[Close]

BLAST of Cucsa.327700 vs. NCBI nr
Match: gi|821595313|ref|NP_001295819.1| (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 1.8e-123
Identity = 226/228 (99.12%), Postives = 227/228 (99.56%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTL AKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTS+YDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 228

[Close]

BLAST of Cucsa.327700 vs. NCBI nr
Match: gi|659089595|ref|XP_008445594.1| (PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 428.7 bits (1101), Expect = 7.5e-117
Identity = 214/226 (94.69%), Postives = 221/226 (97.79%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHD 268
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFE+D
Sbjct: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEYD 226

[Close]

BLAST of Cucsa.327700 vs. NCBI nr
Match: gi|429537127|gb|AFZ99646.1| (lumazine synthase [Momordica charantia])

HSP 1 Score: 374.8 bits (961), Expect = 1.3e-100
Identity = 188/228 (82.46%), Postives = 203/228 (89.04%), Query Frame = 1


Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFA+PAQGL+HRQ+L ++F+  NF  TQLQF G   AKSQPLSFSSQ  L N  S  
Sbjct: 1   MAASFASPAQGLLHRQHLPIAFTTSNFNRTQLQFHGATPAKSQPLSFSSQLKLSNDASPR 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           N+HRSSFA TAAVRHI GSL+KA GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NDHRSSFAQTAAVRHIVGSLSKAEGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVA+RLG SGKYHA+LCIGAVI+GDTSHYDAVVN +ASGVLSAGL S
Sbjct: 121 IDVVWVPGSFDIPVVAERLGNSGKYHAILCIGAVIKGDTSHYDAVVNSTASGVLSAGLKS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELASMFEHDLK 270
           GVPC+FSVLTCD L+Q F+RAGGK GNKGSEGALTAMELASMFEHDLK
Sbjct: 181 GVPCVFSVLTCDNLDQAFNRAGGKSGNKGSEGALTAMELASMFEHDLK 228

The following BLAST results are available for this feature:

BLAST of Cucsa.327700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RISB_ARATH	9.3e-67	64.95	6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana G...	[more]
RISB_SPIOL	1.9e-64	57.89	6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea PE=1...	[more]
RISB_PELTS	2.4e-38	52.14	6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (stra...	[more]
RISB_CLOB8	1.2e-37	51.45	6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC...	[more]
RISB_ANOFW	2.0e-37	55.07	6,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DS...	[more]

BLAST of Cucsa.327700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGW6_CUCSA	1.2e-142	97.77	6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus GN=Csa_6G366300 PE=3 ...	[more]
E7BRS1_CUCSA	6.8e-125	100.00	6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=3 SV=1	[more]
B7SIS4_CUCSA	1.3e-123	99.12	6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=2 SV=1	[more]
L0C9N6_MOMCH	8.9e-101	82.46	6,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia PE=2 SV=1	[more]
U5FG99_POPTR	2.0e-68	59.13	6,7-dimethyl-8-ribityllumazine synthase OS=Populus trichocarpa GN=POPTR_0017s003...	[more]

BLAST of Cucsa.327700 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44050.1	5.2e-68	64.95	6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine s...	[more]

BLAST of Cucsa.327700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700192428\|gb\|KGN47632.1\|	1.8e-142	97.77	6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus]	[more]
gi\|311701739\|gb\|ADQ00634.1\|	9.8e-125	100.00	6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus]	[more]
gi\|821595313\|ref\|NP_001295819.1\|	1.8e-123	99.12	6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus]	[more]
gi\|659089595\|ref\|XP_008445594.1\|	7.5e-117	94.69	PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucu...	[more]
gi\|429537127\|gb\|AFZ99646.1\|	1.3e-100	82.46	lumazine synthase [Momordica charantia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002180	LS/RS
IPR002180	LS/RS

Vocabulary: **Biological Process**
Term	Definition
GO:0009231	riboflavin biosynthetic process
GO:0009231	riboflavin biosynthetic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0009349	riboflavin synthase complex
GO:0009349	riboflavin synthase complex

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0009231	riboflavin biosynthetic process
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009349	riboflavin synthase complex
molecular_function	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.327700.1	Cucsa.327700.1	mRNA
Cucsa.327700.2	Cucsa.327700.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	GENE3D	G3DSA:3.40.50.960		coord: 117..259 score: 2.0
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	HAMAP	MF_00178	Lumazine_synth	coord: 122..262 score: 23
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	PANTHER	PTHR21058	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE	coord: 55..258 score: 1.3
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	PFAM	PF00885	DMRL_synthase	coord: 126..260 score: 1.2
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	TIGRFAMs	TIGR00114	TIGR00114	coord: 127..259 score: 7.1
IPR002180	6,7-dimethyl-8-ribityllumazine synthase	unknown	SSF52121	Lumazine synthase	coord: 120..260 score: 7.2
None	No IPR available	PANTHER	PTHR21058:SF0	6,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE	coord: 55..258 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.327700	Cla022008	Watermelon (97103) v1	cgywmB593
Cucsa.327700	Csa6G366300	Cucumber (Chinese Long) v2	cgycuB466
Cucsa.327700	MELO3C011439	Melon (DHL92) v3.5.1	cgymeB539
Cucsa.327700	ClCG08G010210	Watermelon (Charleston Gray)	cgywcgB565
Cucsa.327700	CSPI06G19490	Wild cucumber (PI 183967)	cgycpiB492
Cucsa.327700	CmaCh05G004350	Cucurbita maxima (Rimu)	cgycmaB0909
Cucsa.327700	CmoCh05G004570	Cucurbita moschata (Rifu)	cgycmoB0907
Cucsa.327700	CmoCh12G000710	Cucurbita moschata (Rifu)	cgycmoB0904
Cucsa.327700	Lsi08G008790	Bottle gourd (USVL1VR-Ls)	cgylsiB535
Cucsa.327700	Cp4.1LG11g03640	Cucurbita pepo (Zucchini)	cgycpeB0863
Cucsa.327700	Cp4.1LG07g00610	Cucurbita pepo (Zucchini)	cgycpeB0866
Cucsa.327700	MELO3C011439.2	Melon (DHL92) v3.6.1	cgymedB539
Cucsa.327700	CsaV3_6G032410	Cucumber (Chinese Long) v3	cgycucB508
Cucsa.327700	Cla97C08G153070	Watermelon (97103) v2	cgywmbB569
Cucsa.327700	Bhi04G001140	Wax gourd	cgywgoB664
Cucsa.327700	Carg26691	Silver-seed gourd	carcgyB0009
Cucsa.327700	Carg09282	Silver-seed gourd	carcgyB0175

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.327700	Wax gourd	cgywgoB662
Cucsa.327700	Cucurbita maxima (Rimu)	cgycmaB0906