Carg09282 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTAGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTCGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTCATTTCTCTTTCCCGCTCTTTTTTTTTTTTTCGTCTTCTTATTCTTTTGATTCTGGAAGTTCTGATTGTTCGTTCTTGAGGTTCCTCTTTAGGTATTTTTGTTAATAATTTTGGACTTGTGAGGTCTCGGCGTCTGAAGTGGTTTTTTCTTATCGTCTACCTAAAGAGGTATAGTCTAGTTGAGAAACATGCTTCTACATGATGCTGTATCGTCTTAGAAATTATTCGCTTCTAAGAAGCGTTCTTTTGATTTGTTGCTTGCAACCAATTCAAAGGTGGTAGTCACATTTGTGGCTGCGACAATGAGTAATTTCTTGGCTTGGCTACAATGAATTCAAAGCATGGTCGTGTATTCTTATGATGTATAAATCTGAAATTCTTACAAGCCTTTTCGCTGCAGCCTTCCGAGCGAATTCTGTTATCATGAATCTAAACTGAATTTTTTCCCCCTGTCATTTTTTGACGATGGACTAGTAAGATTTAACCATGAAATCGATGGTTTTTCTTGCTTGCATATCCCGTTGATTGGTTTGTCATTATTGAATACTTCTTTTTGCCTTGATGAAGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTAAGCGTTTCAATATACAAATTGCGAAAGTCGCATCATCTAGTCTTCTTTTTTTCTATTGTTGGAAACTGAGATTCCTTTATTTTAACTAATCGAAACAGTAAACAGGTTTATAACACCATTAAGCATATGAGCAGAGCGAGTGTGTGGATAAATATGTTTAGGCAATGCTTTAAAAGACTATTGAAGTTTACACCCCGAGGTGAGGCAAGACTCATAAATTTTAGCCTCAAAACTTATGCCTTCTTTGAACCATAAGAGGCGCGCATGCCTCTGTGAAATGAAACACGCATGGAGGATTAAAGTCGCTGGGCCTTAAGTATTGGTTAGAAGAATAATCTTAATTTACCTCTTTCTTACCAAACATAAAGGTTTGAGTTGTGATAATTTGAACATTTCTACTTTTACTATTGCGACTTTAGGGTGATTTTTTGTTGAAGTGGCTATCTACCGGGGTGGTTTTTTTTTTAAACCCTTATATTAATATTATGTTTAGCTATACTTGGTCCTACCAATATAGGATTTGTAAATGTTTTTAATTAGATTTGAGGCTTGTGCCTCGCCTCTTCTAAGGAAAAGTTTTAAGGCTGCCTTTATCCTTTAAAAACATTGGAACTAGATTCTCATGTATGTCATGTGAGTAAGTAAACAAATTTAACTAGATATTATGGGTTTAAGTAGAGTAGGATGAATGAATTTGATCGACAGAGGAAAGCAGAACATAGAACTTTCGTCAGATTTGCATTGAGAGAGAACGTGTATTTGCCCTCTACTAGTTGGCATGCAGCGTTAACTTTGCTTGACATGTTGAATTTATTATTTACATCGCTTTCATATCAGGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGGTATGCTTTCCTGTAACACATATCTAGTCCTTTAATATATCTAGTCTTGGGTGCACTTATTAATATCACGAACTACTTGTTTATGATAGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGTTGGCTTTTTTTTTTTTTTTTTTTTTTGAGTTTAGTAGTACCCTGTTAATTTGAATTTTTCTTGCCAATATTTGTTCTGTTTGCTTACCTTCCTCAAGTTCAACCTCAATGGTTGAGCATTAAGCATGGTGGTTAAGGTTTTTGAATCCAATTGATATGTTCAAGAATTTTGAGACCATCATATCTTGAGACATTTAAGAGCGTATAAGATTCTAAATACTTAAATATTGAAGTGAAGTTGACTTTATCGTTCCAGTTTTGACATCTATGAACCATGAGGGATTAAGGAATTTCAGGGTATGAAAAGGACAAGAAGAATCTGGTTATTATAGATTCATAAATAGATACAGATGAATTCAAATTGTGCCATCACATGCACATTCTTAGTTCTTTATTAAAAAAAAAAAAAAATGGTGTCTCCAATTAAAGCTTATATTTCTCCCTCAATTGGACGCTCATGCAATTCTTATAATTAATTTGATTTTATAACGTCAAAGGCCATTGTCATCAGTCGAAGTATTTCATTTTTTTATGGAATGGTTGGATTATAGGTAATATTTCAGAGGAGCAACGCCCCATTTAAAGCATTCAATATAGACAATAGTAATAGTTCGATTGGGAACAATAATGGTTTTAGGTTTATGTTGTTGGGAGCTAACTATGTTCTTGTTCTTGTATAACTGATATGAGGATTATCTTTTACCCTATATGTGTGCAAACATATGTTGAAATTTATTGATATACCTGTTGAAGTGTTGATAACTGCAATGCAAGTAATCTCTGTAACCATCTTTTTACTACCATTTATATCAACGCTACCTTCTTAATTCTACTCTTTCTTCATCGTTTAGTTGACGCCAGATGAAACTCAAGCGATTTTTCTGATGCCTATGCAGGAGTTCCATGCGTATTTAGCGTCGTGACTTGTGACAACTTGGACCAGGTAAATATGATCCTAAACTGACTGTTAACAAGTATTTTACCTAGAGAATTGTTTTCTATGGAGCTGCATGATTTCTGATCATTATCTACTTTTTGCCACCTTTTTTCTTTCTCCTGTCTGAAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTGTAAGTTGTTTAAGAGCAAAAATATATGGGAAAAAATTTACAATATATGGATAAAAAACGTTGAATTTGTTATTTTCATGTATGTATATATGTTCATATTTCAATCTTATAAGATTTTGCATGACTTATAATATGTAGTGCCTTTTCTTGGCTTCTGAGAAGTGACTTTTGTAATCCATTTTGAATGTGCTCTTATCAGGGTAAAAAATGCAAACTTCACAATGGAACATGTAATCATATTTCATTTGTCTGTATCCATATCCATGGATGTCTCATATCTGCATCCATGGCTTCTAGCAAACAACATCACTGAAGCGATATTGTAACTTCCCGTCTCCGTCCCTATCCATGGGAACCGCAGCACACTCCTTAGGGTGATCTTCCTTTAGCAAATATTGCAAGGAAGATAACTTGGTTTAGAGACGGGAAAACATGCCACAATCCAAAGATGCTTATATTCACGTTTCTCCATTTTTTTCAGCATCAATTTGTTTGAATCATTAATTGTTTGTTATAAGCATCATAGTTTGGTTATTATGCAATCGACTATATCCAAACTTTTTGTACCTAATATTCATTCCACCATTCTTTTATTGAAACTCGTGTATTCATTGGCCAATTTCACTTTTCCTACAGATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAGTCGAGAAACAGGATGTAACGTTTTCCACATTGCGGGTTTTCACAGTCTTGTGATTTCTCTGTTGTCTTTGCTAATGGTGGAATGCTTAATCAAATTGCTAAAAGCCACATGATGTCTCAGGCAGAAGTCAGCTGAAACTGCTCGAGAGGATGGAGTGTAAGTTCTCATGATTTCAATTTTTTTCGATTTTCAAAATTTCTTTGTTCGGCATTGTCTTTTTAAGTTTGATGTTAGCATAAAAGATGAGGCGTTCACTTGTGGCATTGTGTTTAGCAATGCGCAACGAACAAAGATTATATTACCGAAGAGGCGTCGGTATTCAGTTATAAATG ATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTAGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTCGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGAGTTCCATGCGTATTTAGCGTCGTGACTTGTGACAACTTGGACCAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTGGTAAAAAATGCAAACTTCACAATGGAACATATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAGTCGAGAAACAGGATGTAACGTTTTCCACATTGCGGGTTTTCACAGTCTTGTGATTTCTCTGTTGTCTTTGCTAATGGCAGAAGTCAGCTGAAACTGCTCGAGAGGATGGAGTGTAAGTTCTCATGATTTCAATTTTTTTCGATTTTCAAAATTTCTTTGGTTAGCATAAAAGATGAGGCGTTCACTTGTGGCATTGTGTTTAGCAATGCGCAACGAACAAAGATTATATTACCGAAGAGGCGTCGGTATTCAGTTATAAATG ATGGCCGCCTCATTTACGGCTCCGGCTCAGGGCCTGGTTCATTGTAGAAATCCGACGCTCGGATTTTCCGATTCCATCTTCAATCGCACTCAACTTCAATTTCAGGGGCCAGTTCCTGCAAAATCACATCCCCTTTCCTTTTCGTATCAATTGAAGCTTGCTAATGATGTATCTCCCACAAAGGATCACCGTCGCTCTTTTGTGCAGACGGCCGCCGTTCGCCACATCGTCGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTTAACGAAATTGTGACAAGGCCAATGCTTGAGGGAGCTTTGTCTACATTCAAAAGTTATTCAGTTCAAGATGAGGATATTGATGTTGTCTGGGTTCCGGGGAGCTTTGATATTCCTGTGGTCGCTGAAAGGCTTGGGACATCTGGAAAGTACCATGCTGTCTTATGCATTGGAGCTGTGATTAGAGGTGACACATCCCACTATGATGCCGTTGTAAGCTCTTCTGCATCCGGAGTACTTTCTGCAGGATTAAAATCAGGAGTTCCATGCGTATTTAGCGTCGTGACTTGTGACAACTTGGACCAGGCTTTCAATCGAGCTGGTGGTAAACATGGAAATAAGGGTTCTGAGGGTGCTTTGACTGCTGGTAAAAAATGCAAACTTCACAATGGAACATATGGAGCTGGCATCGTTGTTCGAGTACGACCTGAAGTAGTCGAGAAACAGGATGTAACGTTTTCCACATTGCGGGTTTTCACAGTCTTGTGA MAASFTAPAQGLVHCRNPTLGFSDSIFNRTQLQFQGPVPAKSHPLSFSYQLKLANDVSPTKDHRRSFVQTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAERLGTSGKYHAVLCIGAVIRGDTSHYDAVVSSSASGVLSAGLKSGVPCVFSVVTCDNLDQAFNRAGGKHGNKGSEGALTAGKKCKLHNGTYGAGIVVRVRPEVVEKQDVTFSTLRVFTVL
BLAST of Carg09282 vs. NCBI nr
Match: XP_022962396.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 426.4 bits (1095), Expect = 6.8e-116 Identity = 213/216 (98.61%), Postives = 215/216 (99.54%), Query Frame = 0
BLAST of Carg09282 vs. NCBI nr
Match: XP_022997258.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 419.9 bits (1078), Expect = 6.4e-114 Identity = 210/216 (97.22%), Postives = 212/216 (98.15%), Query Frame = 0
BLAST of Carg09282 vs. NCBI nr
Match: XP_023546359.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 386.7 bits (992), Expect = 6.0e-104 Identity = 206/268 (76.87%), Postives = 208/268 (77.61%), Query Frame = 0
BLAST of Carg09282 vs. NCBI nr
Match: XP_022132287.1 (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Momordica charantia] >AFZ99646.1 lumazine synthase [Momordica charantia]) HSP 1 Score: 364.8 bits (935), Expect = 2.4e-97 Identity = 183/216 (84.72%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of Carg09282 vs. NCBI nr
Match: XP_008445594.1 (PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucumis melo]) HSP 1 Score: 347.1 bits (889), Expect = 5.3e-92 Identity = 177/216 (81.94%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Carg09282 vs. TAIR10
Match: AT2G44050.1 (6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase) HSP 1 Score: 238.0 bits (606), Expect = 6.3e-63 Identity = 117/177 (66.10%), Postives = 147/177 (83.05%), Query Frame = 0
BLAST of Carg09282 vs. Swiss-Prot
Match: sp|O80575|RISB_ARATH (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44050 PE=2 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.1e-61 Identity = 117/177 (66.10%), Postives = 147/177 (83.05%), Query Frame = 0
BLAST of Carg09282 vs. Swiss-Prot
Match: sp|Q9XH32|RISB_SPIOL (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 1.9e-56 Identity = 108/160 (67.50%), Postives = 132/160 (82.50%), Query Frame = 0
BLAST of Carg09282 vs. Swiss-Prot
Match: sp|A5D1C7|RISB_PELTS (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=ribH PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 9.6e-37 Identity = 72/142 (50.70%), Postives = 99/142 (69.72%), Query Frame = 0
BLAST of Carg09282 vs. Swiss-Prot
Match: sp|A6LSS9|RISB_CLOB8 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) OX=290402 GN=ribH PE=3 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 4.0e-35 Identity = 69/140 (49.29%), Postives = 99/140 (70.71%), Query Frame = 0
BLAST of Carg09282 vs. Swiss-Prot
Match: sp|B9E377|RISB_CLOK1 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium kluyveri (strain NBRC 12016) OX=583346 GN=ribH PE=3 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34 Identity = 66/134 (49.25%), Postives = 96/134 (71.64%), Query Frame = 0
BLAST of Carg09282 vs. TrEMBL
Match: tr|L0C9N6|L0C9N6_MOMCH (6,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia OX=3673 PE=2 SV=1) HSP 1 Score: 364.8 bits (935), Expect = 1.6e-97 Identity = 183/216 (84.72%), Postives = 196/216 (90.74%), Query Frame = 0
BLAST of Carg09282 vs. TrEMBL
Match: tr|A0A1S3BDY2|A0A1S3BDY2_CUCME (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis melo OX=3656 GN=LOC103488575 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 3.5e-92 Identity = 177/216 (81.94%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Carg09282 vs. TrEMBL
Match: tr|B7SIS4|B7SIS4_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.9e-91 Identity = 176/216 (81.48%), Postives = 187/216 (86.57%), Query Frame = 0
BLAST of Carg09282 vs. TrEMBL
Match: tr|E7BRS1|E7BRS1_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 6.6e-91 Identity = 176/216 (81.48%), Postives = 186/216 (86.11%), Query Frame = 0
BLAST of Carg09282 vs. TrEMBL
Match: tr|A0A0A0KGW6|A0A0A0KGW6_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus OX=3659 GN=Csa_6G366300 PE=3 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 6.6e-91 Identity = 176/216 (81.48%), Postives = 186/216 (86.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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