Cucsa.327700.2 (mRNA) Cucumber (Gy14) v1

Overview
NameCucsa.327700.2
TypemRNA
OrganismCucumis sativus (Cucumber (Gy14) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Locationscaffold03159 : 53080 .. 57071 (+)
Sequence length1714
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAGAATAGGTAAAGTTCAAATTGCGTTAATATAAAAAGGATGCTATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTCATTTCTCTTTTCTCTTTTCTTTTTGTTGTTTTTTTCTCCCTCTTCTTCTAATTCATGATGTTTTGTTCGTTCTCTAGGGTACTTAGCCGTTTTTGTTCATCATTTTGAACTCTCAAGTTGTTTTTCCTTATCGTTTACCTAAAAACGTGTAGTAAATATAATGACGTCTCGTCTGAGGATTTATTCGCTTCTAAGCACCGTTCTATTGATTTGTTGCCTGCATTCAATTCAAAGATTATGCGACAATGATTAATATCTGTGATGTATTAAATTGAACTTCTTACAATTTTTGTCCATTCGGCTGTTCTTGTGACTTCTGTTATCATGAATCTAAACTGtAGTTTTTTTTTTTTTttGTTTACTCCCTTGTCATTTCTGTGTGTGGACTCGTGGGATTTAATCATAACATCAATGTTTATTCATGTTTGCATATCTTGTTAATGGGTTTTTGATTATTGAAAGAATTGTTTTGCTTTGATGAAGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTAAGTGTTTCATTATACAACATGTGAAACTCGCATCCTCTAGTGTTTTGCTAGTGTTGGAAACTGAGATTCATTTATTTTAATTAATCAAAACAGAAAACAGGTTCATGACCCCGTTAAGCATATGCCAAGCAAAGCAAGCTTGTGAATAAATATGTTTGGAACTAGCATTGTTTTAAAAGACTACTGAGACTCACGCCTCGAGGCCCACCTTGAGGCATGACTCTAACTTGTAGCCTTGAGACAAACACCTTCTTTGAATAAAAAGAGGGAAGCCACTTGTGGAAACACACCGTTGATCTAAGTCTCTACACGTCTAGTGATTTGAAGAATAATATGAATTTCTCTCTCTTATGAAATTTGAATGTTGAGTTCTGATAATTTGAACATTTTATATTTTTAATGATATTAACAGTGATGCTAAAGATGTCCTAAAATTTTTGTTTAAGTGGGAATTGACGAGAGTGGTTTTTTtAATATACTTTTATATGACTATTATGTTTAGCTATACTTTGTCGAATCAGTTCAAGATTTGTAAAATGTTTTTAGTTAAATTAGAAGTTGCCTCCTTGCCTCTTAGGAAGGGTCTAAAGTTGGCTTTTTAAAACATTGGAAACTAGATTTTGTGCTTGTCAGGAGTATAAGTAAACAAATTTAACTACATATTGTGGGTACAAGTAAAaTAGGGTGGCTGAATTTCATTGGCAGACAAGTAGAATACACCTTTCATCAGATTTGCATTGAGAGAGAACGTGTATCTGACCTTGCTAGTTGACAAACAGCTTAACTTTGCTTGACATATTGACTTTATTATTTACCTCGCTATCATATTAGGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGGTATGATTTTCTGTAACATTTATCAAGTCCTTTTATATATTCTAGTCTTCAGTGCATTTATTAATACCATGACCCATTTCATTATGATAGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGTTGGCTTTCTTTTTTTGGTAGTTTTGCAGAACGTTATATACTTTTATCCTATTAATTTAAGTTTTCTAACCAATTTTTGTTCTGTATTGCCTATCTTTTATGAGTTCAACTCAAGGCTTTTGATTTGCCATCATTTCTAGGAGTTTCTAAATTCTAAATATTGCAGTCGAGTTGACTTAACTATTCCAATTTTGACATCTATGAACCATGAGGGATTTAAGGAATATTGGGGTATGAAGAGGACAAGAAGCACCTGGTTGTTATAGATTTATATAAATTATGTGATTATGTGCACATTCCCAGCCTTTTATTGAAGAAAAAaTATTGGTTTCCCCGGTTAAAGCTTAACATTAATTTCATATGATAACATCAAAGGCCTTGGTTATTGGTCGAAGTATTTCCTTTTTATAATGGAACAGCAAGATTATAGGTTATATTTCAGTGAATCAAGACCCCTTTTAAAGCATTTCAATCTAAGCCTTAGTAATAGTTTGAGTTGTGGAACAATAATATGTTTAAGCTGTTGGGACTTGGGAGCTATAGTGAACTATGTTCTTGTATAACCGACATGAGAATATCTTTTACTCCTTATATGTGAAAACCTGTGTTAAAATTGTTGATAGTAATCTCTGTAACCGTATTTTTAGAGAAGTACCATTTATATCAATGCTTCCATCTTAGTTCTACTCTTTCTTCATCTTTGAGTTGTTGCTACATGAAGCTAAAGCCATTTTCTTATGCCTATGTAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGTAAATATGATCTAAACTGACTGTTACAAGTATTTTCCTGCCTAGAGAATTGTTCTCAAAGGAGCTATGTGATTTCTGGTCATTACGTGCTTTTCACCACTTTTTAATTTGTGTGAAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTGTAAGTTTTTTtAGTTAGTTTATAGTGTTCAAACCGTTGATTGTTCTAAGAAAAGAGACTGATTACTAACATATTTACTTTTCAAACGGTTTGCCAAAGCAGAAGTATACAGGAAAATTGTCTAATATGTGAACAAAAAGCACTAAATTCCTTTTCTTTCATGCGTATATATAGGTTTATATTTGACTGAATTTTATTGTCATTTGCAAGTGGTACCGCTAGGAATAGGATTTATCTTTTTAAACTTTATGATTATTATAATTATTTCCGATTTGTGAATCTTTTGTTATAAGATTTTGCATCATTTTGGCCAATTTTTCTCTTCTTCTACAGATGGAGCTGGCATCTATGTTTGAGCACGATCTGAAGTAGTCGAGATATAAGATCTAACAATTTCCATTATCCTTAGTTTTGCGGTTTCTTGCATTTCCCTGCTGTCCTTAGTAATGGTAGAATGCTTTCATTAAAAAAAAAAaaGAAGCCACATGATGGCTCAAACTGAAGTCAGCTGCAACTGGTCCAGAGGAAGTAGGAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTGCTCAGCTTTGCCTTTTAACCGTTTATGTCAGAATAATGATATGAGGAATTTTATTTGTGGCATTGTGTGATTTGTGATGCACAATTAACAGAGTTTATATTATTGAAGAAGCCTTGGTGAATCATTAGTAAGTTCAACTCAGGGTGCTTTGATATTGATATTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACTCATTTGATTTTTTTCCCTGAAGACTGGAGCTGCTACAGCTTCCTTTCAAATCTCTTTCATTTCTCTCTTCTAATTAGTGTAAAACCGAGACATATGAGCCAATGTCTCGTTGAAACATACGTGGTCGATA

mRNA sequence

TGGAGAATAGGTAAAGTTCAAATTGCGTTAATATAAAAAGGATGCTATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGcttcttcttcttcttcttcttcttcttcttcttcttcttcttcGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTGTAAGTTTTTTTAGTTAGTTTATAGTGTTCAAACCGTTGATTGTTCTAAGAAAAGAGACTGATTACTAACATATTTACTTTTCAAACGGTTTGCCAAAGCAGAAGTATACAGGAAAATTGTCTAATATGTGAACAAAAAGCACTAAATTCCTTTTCTTTCATGCGTATATATAGGTTTATATTTGACTGAATTTTATTGTCATTTGCAAGTGGTACCGCTAGGAATAGGATTTATCTTTTTAAACTTTATGATTATTATAATTATTTCCGATTTGTGAATCTTTTGTTATAAGATTTTGCATCATTTTGGCCAATTTTTCTCTTCTTCTACAGATGGAGCTGGCATCTATGTTTGAGCACGATCTGAAGTAGTCGAGATATAAGATCTAACAATTTCCATTATCCTTAGTTTTGCGGTTTCTTGCATTTCCCTGCTGTCCTTAGTAATGGTAGAATGCTTTCATTAAAAAAAAAAAAGAAGCCACATGATGGCTCAAACTGAAGTCAGCTGCAACTGGTCCAGAGGAAGTAGGAGGTTCCATGATTTCAATTTTCAAAGTTTCTTTGCTCAGCTTTGCCTTTTAACCGTTTATGTCAGAATAATGATATGAGGAATTTTATTTGTGGCATTGTGTGATTTGTGATGCACAATTAACAGAGTTTATATTATTGAAGAAGCCTTGGTGAATCATTAGTAAGTTCAACTCAGGGTGCTTTGATATTGATATTTTCTATTATTCAAATTCATCTTGTTTTCCAGGTTGACTCATTTGATTTTTTTCCCTGAAGACTGGAGCTGCTACAGCTTCCTTTCAAATCTCTTTCATTTCTCTCTTCTAATTAGTGTAAAACCGAGACATATGAGCCAATGTCTCGTTGAAACATACGTGGTCGATA

Coding sequence (CDS)

ATGTGTATGTATGTATATATAGGCATAATTCTGATTGCCAAAGTCAAGCCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGTGTGGGAAGTTGTTATTGGGTTTGATAATGGCGGCCTCATTTGCTGCTCCGGCTCAGGGTTTGGTTCACCGTCAAAATCTGACGCTCTCATTTTCCAATTACAACTTCAAACCTACTCAGCTTCAGTTTCAGGGCACACTTTCTGCTAAATCCCAACCCCTCTCCTTCTCTTCTCAATTCAACCTTCTTAACCATCCTTCTTCCCCCAACAATCACCGTTCCTCTTTTGCTCACACCGCCGCCGTTCGCCACATCGCTGGCTCTCTTGCCAAAGCTGGTGGCCTTCGCTTTGCTGTGGTTGTGGGGCGGTTCAATGAAATTGTGACTAGGCCAATGCTCGAGGGAGCTTTGTCTACTTTCAAAAGTTATTCAGTTCAAGACGAGGATATTGATGTTGTCTGGGTCCCAGGGAGCTTTGATATTCCTGTGGTTGCTCAAAGGCTTGGGCAATCTGGGAAGTACCATGCTGTCTTGTGCATTGGAGCTGTGATTAGAGGTGATACATCCCACTATGATGCCGTTGTAAATTGTTCTGCATCTGGAGTACTTTCTGCCGGTTTAAATTCAGGAGTTCCTTGCATATTTAGCGTCTTAACTTGTGACACCCTAGAACAGGGTTTCGATCGAGCTGGCGGTAAAGTTGGAAATAAGGGATCTGAGGGTGCTTTGACAGCTGTAAGTTTTTTtAGTTAG

Protein sequence

MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS*
Homology
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BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match: RISB_ARATH (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana GN=At2g44050 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 8.7e-62
Identity = 119/187 (63.64%), Postives = 146/187 (78.07%), Query Frame = 1 

Query: 77  GTLSAKSQPLSFSSQFNLLNHPSSPNNH-RSSFAHTAAVRHIAGSLAKAGGLRFAVVVGR 136
           G+   KS  LSFSS  +    P +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 137 FNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAV 196
           FNE+VT+ +LEGA+ TFK YSV++EDI+V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 197 IRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 256
           IRGDT+HYDAV N +ASGVLSA +NSGVPCIF VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 257 TAVSFFS 263
           TA+   S
Sbjct: 214 TALEMAS 220

[Close]
BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match: RISB_SPIOL (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 8.2e-60
Identity = 125/221 (56.56%), Postives = 154/221 (69.68%), Query Frame = 1 

Query: 44  ASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNL--LNHPSSP 103
           ASFAA        Q   L+ +    KP   Q   T    S PLS SS F    L H +S 
Sbjct: 2   ASFAAS-------QTCFLTTNPTCLKPNSPQKSSTFLPFSAPLSSSSSFPGCGLVHVASN 61

Query: 104 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 163
             +R+SF  T AVR + G + KA   RFA+VV RFNE VTR ++EGAL TFK YSV +ED
Sbjct: 62  KKNRASFVVTNAVRELEGYVTKAQSFRFAIVVARFNEFVTRRLMEGALDTFKKYSV-NED 121

Query: 164 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 223
           IDVVWVPG++++ V AQ LG+SGKYHA++C+GAV++GDTSHYDAVVN ++SGVLSAGLNS
Sbjct: 122 IDVVWVPGAYELGVTAQALGKSGKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNS 181

Query: 224 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPC+F VLTCD ++Q  +RAGGK GNKG+E ALTA+   S
Sbjct: 182 GVPCVFGVLTCDNMDQAINRAGGKAGNKGAESALTAIEMAS 214

[Close]
BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match: RISB_PELTS (6,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=ribH PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 7.5e-37
Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = 1 

Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GLRF +V+GRFNE +T  +L GAL     + V D+DI+V WVPG+F+IP+VA+++  + K
Sbjct: 13  GLRFGIVIGRFNEFITNKLLSGALDALNRHGVADQDIEVAWVPGAFEIPMVARKMASAMK 72

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y AV+C+GAVIRG T H+D V    A GV   GL SGVP IF V+T D++EQ  +RAG K
Sbjct: 73  YDAVICLGAVIRGATPHFDYVAGEVAKGVARIGLESGVPTIFGVITADSIEQAIERAGAK 132

Query: 246 VGNKGSEGALTAV 259
            GNKG + A+TA+
Sbjct: 133 AGNKGWDAAVTAI 145

[Close]
BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match: RISB_CLOB8 (6,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.8e-36
Identity = 69/133 (51.88%), Postives = 98/133 (73.68%), Query Frame = 1 

Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GL+F +VVGRFNE +   +LEGA+   K + V++EDID+ WVPG+F+IP++A+++ +S K
Sbjct: 12  GLKFGIVVGRFNEFIGGKLLEGAIDGLKRHGVKEEDIDIAWVPGAFEIPLIAKKMAKSPK 71

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y  V+C+GAVI+G TSHYD V +  + G+ S  L SG P IF VLT +T+EQ  +RAG K
Sbjct: 72  YDGVICLGAVIKGSTSHYDYVCSEVSKGIASVSLESGKPVIFGVLTTNTIEQAIERAGTK 131

Query: 246 VGNKGSEGALTAV 259
            GNKG E A++A+
Sbjct: 132 AGNKGYESAVSAI 144

[Close]
BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match: RISB_ANOFW (6,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=ribH PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.7e-36
Identity = 74/133 (55.64%), Postives = 96/133 (72.18%), Query Frame = 1 

Query: 126 GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGK 185
           GL+  +VV RFNE +T  +L GAL   K + V+++ IDV WVPG+F+IP+VA+++ +S K
Sbjct: 12  GLKIGIVVARFNEFITSKLLSGALDGLKRHGVEEQHIDVAWVPGAFEIPLVAKKMAESKK 71

Query: 186 YHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGK 245
           Y AV+ +GAVIRG TSHYD V N  A G   A L+SGVP IF VLT DT+EQ  +RAG K
Sbjct: 72  YDAVITLGAVIRGATSHYDYVCNEVAKGTSHAALSSGVPVIFGVLTTDTIEQAIERAGTK 131

Query: 246 VGNKGSEGALTAV 259
            GNKG E AL+A+
Sbjct: 132 AGNKGWEAALSAI 144

[Close]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match: A0A0A0KGW6_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus GN=Csa_6G366300 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 6.4e-136
Identity = 252/262 (96.18%), Postives = 253/262 (96.56%), Query Frame = 1 

Query: 1   MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60
           MCMYVYIGIILIAKVKP      SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT
Sbjct: 1   MCMYVYIGIILIAKVKP------SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60

Query: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120
           LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS
Sbjct: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120

Query: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180
           LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL
Sbjct: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180

Query: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240
           GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD
Sbjct: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240

Query: 241 RAGGKVGNKGSEGALTAVSFFS 263
           RAGGKVGNKGSEGALTA+   S
Sbjct: 241 RAGGKVGNKGSEGALTAMELAS 256

[Close]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match: E7BRS1_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 3.5e-118
Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTA+   S
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match: B7SIS4_CUCSA (6,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 6.6e-117
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTL AKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTS+YDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTA+   S
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match: L0C9N6_MOMCH (6,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.6e-94
Identity = 177/221 (80.09%), Postives = 193/221 (87.33%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFA+PAQGL+HRQ+L ++F+  NF  TQLQF G   AKSQPLSFSSQ  L N  S  
Sbjct: 1   MAASFASPAQGLLHRQHLPIAFTTSNFNRTQLQFHGATPAKSQPLSFSSQLKLSNDASPR 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           N+HRSSFA TAAVRHI GSL+KA GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NDHRSSFAQTAAVRHIVGSLSKAEGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVA+RLG SGKYHA+LCIGAVI+GDTSHYDAVVN +ASGVLSAGL S
Sbjct: 121 IDVVWVPGSFDIPVVAERLGNSGKYHAILCIGAVIKGDTSHYDAVVNSTASGVLSAGLKS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPC+FSVLTCD L+Q F+RAGGK GNKGSEGALTA+   S
Sbjct: 181 GVPCVFSVLTCDNLDQAFNRAGGKSGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match: U5FG99_POPTR (6,7-dimethyl-8-ribityllumazine synthase OS=Populus trichocarpa GN=POPTR_0017s00360g PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.5e-64
Identity = 129/223 (57.85%), Postives = 158/223 (70.85%), Query Frame = 1 

Query: 40  LIMAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPS 99
           ++++AS        VH  +   SFS    KPTQL F  + S      S   +        
Sbjct: 2   VLLSASTKDLLSNAVHFHHQNRSFSPLYHKPTQLSFSSSSSIGFGTTSIGFE-------- 61

Query: 100 SPNNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQD 159
                RSS   TAAVRH+ GS+ K  G RFA+VV RFNEI+TRP+LEGA++TFK YSV++
Sbjct: 62  --RKERSSIVETAAVRHLEGSVTKTEGFRFALVVARFNEIITRPLLEGAVATFKKYSVKE 121

Query: 160 EDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGL 219
           EDIDVVWVPGSF+I +VA+RLG+SGKYHAV+CIGAV+RGDT+HYDAV N +ASGVLSAGL
Sbjct: 122 EDIDVVWVPGSFEIGIVAERLGKSGKYHAVVCIGAVVRGDTTHYDAVANSAASGVLSAGL 181

Query: 220 NSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           NSGVPCIF VLTC+ +EQ  +RAGGK GNKG+E ALTA+   S
Sbjct: 182 NSGVPCIFGVLTCEDMEQAINRAGGKSGNKGAEAALTAIEMAS 214

[Close]
BLAST of Cucsa.327700.2 vs. TAIR10
Match: AT2G44050.1 (AT2G44050.1 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase)

HSP 1 Score: 238.4 bits (607), Expect = 4.9e-63
Identity = 119/187 (63.64%), Postives = 146/187 (78.07%), Query Frame = 1 

Query: 77  GTLSAKSQPLSFSSQFNLLNHPSSPNNH-RSSFAHTAAVRHIAGSLAKAGGLRFAVVVGR 136
           G+   KS  LSFSS  +    P +     RSSF  TAAVRH+ GSL +  GLRFA+VV R
Sbjct: 34  GSSVNKSNNLSFSSSTSGFASPLAVEKELRSSFVQTAAVRHVTGSLIRGEGLRFAIVVAR 93

Query: 137 FNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAV 196
           FNE+VT+ +LEGA+ TFK YSV++EDI+V+WVPGSF+I VVAQ LG+SGK+HAVLCIGAV
Sbjct: 94  FNEVVTKLLLEGAIETFKKYSVREEDIEVIWVPGSFEIGVVAQNLGKSGKFHAVLCIGAV 153

Query: 197 IRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGAL 256
           IRGDT+HYDAV N +ASGVLSA +NSGVPCIF VLTC+ ++Q  +R+GGK GNKG+E AL
Sbjct: 154 IRGDTTHYDAVANSAASGVLSASINSGVPCIFGVLTCEDMDQALNRSGGKAGNKGAETAL 213

Query: 257 TAVSFFS 263
           TA+   S
Sbjct: 214 TALEMAS 220

[Close]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match: gi|700192428|gb|KGN47632.1| (6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 9.2e-136
Identity = 252/262 (96.18%), Postives = 253/262 (96.56%), Query Frame = 1 

Query: 1   MCMYVYIGIILIAKVKPASSSSSSSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60
           MCMYVYIGIILIAKVKP      SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT
Sbjct: 1   MCMYVYIGIILIAKVKP------SSSSSSSSSCGKLLLGLIMAASFAAPAQGLVHRQNLT 60

Query: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120
           LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS
Sbjct: 61  LSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSPNNHRSSFAHTAAVRHIAGS 120

Query: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180
           LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL
Sbjct: 121 LAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDEDIDVVWVPGSFDIPVVAQRL 180

Query: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240
           GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD
Sbjct: 181 GQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNSGVPCIFSVLTCDTLEQGFD 240

Query: 241 RAGGKVGNKGSEGALTAVSFFS 263
           RAGGKVGNKGSEGALTA+   S
Sbjct: 241 RAGGKVGNKGSEGALTAMELAS 256

[Close]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match: gi|311701739|gb|ADQ00634.1| (6,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus])

HSP 1 Score: 432.6 bits (1111), Expect = 5.0e-118
Identity = 217/221 (98.19%), Postives = 218/221 (98.64%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTA+   S
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match: gi|821595313|ref|NP_001295819.1| (6,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus])

HSP 1 Score: 428.3 bits (1100), Expect = 9.5e-117
Identity = 215/221 (97.29%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTL AKSQPLSFSSQFNLLNHPSSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLPAKSQPLSFSSQFNLLNHPSSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTS+YDAVVNCSASGVLSAGLNS
Sbjct: 121 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSYYDAVVNCSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTA+   S
Sbjct: 181 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match: gi|659089595|ref|XP_008445594.1| (PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucumis melo])

HSP 1 Score: 412.1 bits (1058), Expect = 7.1e-112
Identity = 206/221 (93.21%), Postives = 213/221 (96.38%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFAAPAQGLVHRQNLTLSFSN NFKPTQLQFQG+LS+KSQPLSFSS+ NLLNH SSP
Sbjct: 1   MAASFAAPAQGLVHRQNLTLSFSNSNFKPTQLQFQGSLSSKSQPLSFSSRLNLLNHASSP 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           NNHRSSFAHTAAVRHI GSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NNHRSSFAHTAAVRHIVGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           +DVVWVPGSFDIPVVAQ+LGQSGKYHAVLCIGAVIRGDTSHYDAVVN SASGVLSAGLNS
Sbjct: 121 VDVVWVPGSFDIPVVAQKLGQSGKYHAVLCIGAVIRGDTSHYDAVVNSSASGVLSAGLNS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPC+FSVLTCDTLEQGFDRAGGKVGNKGSEGALTA+   S
Sbjct: 181 GVPCVFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAMELAS 221

[Close]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match: gi|429537127|gb|AFZ99646.1| (lumazine synthase [Momordica charantia])

HSP 1 Score: 352.4 bits (903), Expect = 6.6e-94
Identity = 177/221 (80.09%), Postives = 193/221 (87.33%), Query Frame = 1 

Query: 42  MAASFAAPAQGLVHRQNLTLSFSNYNFKPTQLQFQGTLSAKSQPLSFSSQFNLLNHPSSP 101
           MAASFA+PAQGL+HRQ+L ++F+  NF  TQLQF G   AKSQPLSFSSQ  L N  S  
Sbjct: 1   MAASFASPAQGLLHRQHLPIAFTTSNFNRTQLQFHGATPAKSQPLSFSSQLKLSNDASPR 60

Query: 102 NNHRSSFAHTAAVRHIAGSLAKAGGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 161
           N+HRSSFA TAAVRHI GSL+KA GLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED
Sbjct: 61  NDHRSSFAQTAAVRHIVGSLSKAEGLRFAVVVGRFNEIVTRPMLEGALSTFKSYSVQDED 120

Query: 162 IDVVWVPGSFDIPVVAQRLGQSGKYHAVLCIGAVIRGDTSHYDAVVNCSASGVLSAGLNS 221
           IDVVWVPGSFDIPVVA+RLG SGKYHA+LCIGAVI+GDTSHYDAVVN +ASGVLSAGL S
Sbjct: 121 IDVVWVPGSFDIPVVAERLGNSGKYHAILCIGAVIKGDTSHYDAVVNSTASGVLSAGLKS 180

Query: 222 GVPCIFSVLTCDTLEQGFDRAGGKVGNKGSEGALTAVSFFS 263
           GVPC+FSVLTCD L+Q F+RAGGK GNKGSEGALTA+   S
Sbjct: 181 GVPCVFSVLTCDNLDQAFNRAGGKSGNKGSEGALTAMELAS 221

The following BLAST results are available for this feature:
BLAST of Cucsa.327700.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RISB_ARATH8.7e-6263.646,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Arabidopsis thaliana G... [more]
RISB_SPIOL8.2e-6056.566,7-dimethyl-8-ribityllumazine synthase, chloroplastic OS=Spinacia oleracea PE=1... [more]
RISB_PELTS7.5e-3753.386,7-dimethyl-8-ribityllumazine synthase OS=Pelotomaculum thermopropionicum (stra... [more]
RISB_CLOB82.8e-3651.886,7-dimethyl-8-ribityllumazine synthase OS=Clostridium beijerinckii (strain ATCC... [more]
RISB_ANOFW3.7e-3655.646,7-dimethyl-8-ribityllumazine synthase OS=Anoxybacillus flavithermus (strain DS... [more]
BLAST of Cucsa.327700.2 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KGW6_CUCSA6.4e-13696.186,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus GN=Csa_6G366300 PE=3 ... [more]
E7BRS1_CUCSA3.5e-11898.196,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=3 SV=1[more]
B7SIS4_CUCSA6.6e-11797.296,7-dimethyl-8-ribityllumazine synthase OS=Cucumis sativus PE=2 SV=1[more]
L0C9N6_MOMCH4.6e-9480.096,7-dimethyl-8-ribityllumazine synthase OS=Momordica charantia PE=2 SV=1[more]
U5FG99_POPTR8.5e-6457.856,7-dimethyl-8-ribityllumazine synthase OS=Populus trichocarpa GN=POPTR_0017s003... [more]
BLAST of Cucsa.327700.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G44050.14.9e-6363.64 6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine s... [more]
BLAST of Cucsa.327700.2 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192428|gb|KGN47632.1|9.2e-13696.186,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus][more]
gi|311701739|gb|ADQ00634.1|5.0e-11898.196,7-dimethyl-8-ribityllumazine synthase [Cucumis sativus][more]
gi|821595313|ref|NP_001295819.1|9.5e-11797.296,7-dimethyl-8-ribityllumazine synthase, chloroplastic [Cucumis sativus][more]
gi|659089595|ref|XP_008445594.1|7.1e-11293.21PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic, partial [Cucu... [more]
gi|429537127|gb|AFZ99646.1|6.6e-9480.09lumazine synthase [Momordica charantia][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002180LS/RS
Vocabulary: Biological Process
TermDefinition
GO:0009231riboflavin biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0009349riboflavin synthase complex
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0009867 jasmonic acid mediated signaling pathway
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0016740 transferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsa.327700Cucsa.327700gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsa.327700.2Cucsa.327700.2-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.327700.2.five_prime_UTR.1Cucsa.327700.2.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.327700.2.CDS.1Cucsa.327700.2.CDS.1CDS
Cucsa.327700.2.CDS.2Cucsa.327700.2.CDS.2CDS
Cucsa.327700.2.CDS.3Cucsa.327700.2.CDS.3CDS
Cucsa.327700.2.CDS.4Cucsa.327700.2.CDS.4CDS
Cucsa.327700.2.CDS.5Cucsa.327700.2.CDS.5CDS
Cucsa.327700.2.CDS.6Cucsa.327700.2.CDS.6CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsa.327700.2.three_prime_UTR.1Cucsa.327700.2.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0021806,7-dimethyl-8-ribityllumazine synthaseGENE3DG3DSA:3.40.50.960coord: 117..259
score: 2.0
IPR0021806,7-dimethyl-8-ribityllumazine synthaseHAMAPMF_00178Lumazine_synthcoord: 122..262
score: 23
IPR0021806,7-dimethyl-8-ribityllumazine synthasePANTHERPTHR210586,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASEcoord: 55..258
score: 1.3
IPR0021806,7-dimethyl-8-ribityllumazine synthasePFAMPF00885DMRL_synthasecoord: 126..260
score: 1.2
IPR0021806,7-dimethyl-8-ribityllumazine synthaseTIGRFAMsTIGR00114TIGR00114coord: 127..259
score: 7.1
IPR0021806,7-dimethyl-8-ribityllumazine synthaseunknownSSF52121Lumazine synthasecoord: 120..260
score: 7.2
NoneNo IPR availablePANTHERPTHR21058:SF06,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASEcoord: 55..258
score: 1.3