Cucsa.282620 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.282620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Glyceraldehyde-3-phosphate dehydrogenase A
Location	scaffold02653 : 36868 .. 39774 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTTACACCAACGATTCACCTCTAATCTTCACTACCTATCATAATTCTCTACCCTAAATTCCCATCTCCTCCATTCTGTTTCAGATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGGTATGTTTTCTCATGCCCATTCCGATTCCGTGTTGCTCTTCTCAATTTGTTCTTGTTTTGATTCTCTTCTGAATAGACCTTCAATTTTAGTTATACCCTTTTGGAATTTCGTATTCTTTTTTACAGCACAGTTCTTAAGGAACTCGTGGTTGATTTTGATTCGTTATGTTCTTCCGATTGTGACTAGCTGTGTGATGTTTGAGTTATACGAGAGAAAAGAGGAAAATGAAGCTTAAAAACTGTCATGTTAGGTAGTTTTGGTTTGCAAAACTAGATGCCAGATTAAAGTAGTTAGCAGAAGAGAAAATTAGTATTGGGACTTCGAAATAATCTGTACTTGAACTACTTCAAGGATTGATATGTTATATTATTATTGATCACCCAAGCTTAAACTGATTGAGTTACGATAAATTTAGTTAATAAATCCATATTCATAATATTTCCTGTCACTTGTGGGATTGGAAATTAGCACATGGTGAAACAAATAGTTATCAATATTAATGGCAGAAGAAACAACTTCATAAGTGTTTGAACTTAGAATATATAGCTAACCCAAAAATTAAAGTTGAGGGATTGTGGTAAAAACAAATTAATTATCAATGATTCTTGCCGGCGTTTGGCTATTTCTTTGCTCTCCTGTTTCAATTGGGAGCAGAGTGATAAACAAGAGAGAGAGCAGGGGAGGAGAGATTCAGTTATGTATAGAGAGTTCAAAATGGGCTCATAAGATAAAGAAGACGATAGCCATACCCTCAACTCACTGTACTAGATAGAATCATGAAGGTAATATGATCCTATAGGTATGATTAGATTAATTAGTATTTAGATCATGAATATTACAATATAAATATAGAAAAGAGAATTCAAATCCAAGATATGAGGCACTTATAAGTTAATAACTACTTTACTCAAGCAGTGATATGATATAGGTAGTTGTGGCAAAGGACATCAGAATGGTTTAGCCATAATTTGTACCTTAGCTATTTTTTTCTTTGAATTGTTTCTAGAAATATAAGCTTTTCTTCCGTTCATTATCTTGTTGTATTTCTTCCATCCATGATCTTGTTGTAGCCTGTATTTGTTAGCATAGCAAAATCTAATAAAACAGTGGAGTGATATATCACCTAGCTTTTGTGATTATAGTTGGAATCTATCATCTCTGTTCGGCATTACAGATAGCATCCTGCTCTTCATTATATATACGTACGTATATATGTATATGTATATATAGGCATGTATTATGTACGTATAAATGTATAAATGTTAACAAAAGGAGTAGATGTAACTTAAGTTGACTTGTGCAGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGGTTAGGTGCTCGCGGAGACATATAGACACTATACAAACATGGATACACGTTATTTTTAAGAAGTCTAGAACTCCGACACAGCAAGAGCGTGTGTATTAAAATTACATATCATTTTTATATCAAAAGGGGATTCAACATCAACAAGTTTATGCATTTATATGGTAAAAAAAGAGTTTGCTTAGACTTAACGAGTGCTTAGTATGTTTGTAATAAACGTTGGACTTGTATTTAATTAGCCCAATGTGCTAAAAGGTATCCTGTCTAATAAGTGTTGGAGTGATCAAGTCTCCGACATGTGTCGGACAAAGATGCTAGCCAAACTAGAGTGTCTTGCTTCTCAGGTGACTATAATATTTTTACTATCTTTTCTCTTCCAAACGAAAAGGGTCAGGCTTTGGTTCATTTGTTTCTTTCTGCTGTGTTTATTCATACTCAGTTTATGGCATCTGCTGAAATAGAAGTCTTTTTCTATCAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGAGTTAGTTTCTCTCATCCTCAATTCTCTTTCACTGATCACAAACCCATAGCTTTTGTCTCACTGAATTTGAATTGACCACGGCAGTTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTACATAGATTCTTAGATAATGTAAATTACAATAAGTACCCCAACTACTCATATCCTTTCAAAAGTTATCATATTATCATTGACTTTTCATATAGTTTTTGAAAACTGCTTTTGGACCTGAAACAGTGTAGCGGTAACTTCGAATAGAAATTAGGACTTGAACACCACCATATCTATTCTAGGTTATGATTCCCATCTTAAATTCCAACGGATTTCTATTCTAAGTGGTAGTTTTTCAATCTTAACGAAAGGTTAGGGGTAATATTACAACTTTTAAAATAACATGGAAAAAAATATCTAAGCTCCATATTTGGGACTCTTCAATGGTTGGATTACGAACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAATCAACAAAATTATTCTTTTTTTTCCTTTTC

mRNA sequence

CTTCCTTACACCAACGATTCACCTCTAATCTTCACTACCTATCATAATTCTCTACCCTAAATTCCCATCTCCTCCATTCTGTTTCAGATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAATCAACAAAATTATTCTTTTTTTTCCTTTTC

Coding sequence (CDS)

ATGGCAATGATTCTCAAAGGAGGACGTGGAATTGGAGTTTCAACTGCTACTTACTTCCCCCACAATCCTAAACCTTCTCCACTTTTCTCCCTTCACATGATGGTACATAAGCTTGCAGCTGAACGCAAAGTCATATGCTGCTCTACCTTGCAGGAATCATCTACTCCTACAGTTGCTGCCGAACCAAAGGAGATAAAGACAGTTCCAAAGGAAGCTCCAGCAAAGGCCAAACCGCCAGCAAAAGCCCCAGTGAAGCCACTGCCTGAGTTGATGGACGAAGAAGTCATACCTTCATTGAAAGCAATTCTTGAAGCACAAGCCGATGTCTCCGATGTTGCATTATCATTCCAAGACGACAGATTGGATGGCTCGTTCTTGAAAAATGGAGTTCCTTACTCATTTTGGGCTTTCTTCCCCAATGGCCTCACAGGTCCAAAAGGGTTTTCACTATCTTCATATGGCAATGGAGGAAGCTCTGTTGAGCCCTTTTTGGTCGATGAGAAGAAAGTTTCGGGAAAGCTTATAGTTTTCTGGATTGAGAAGCGTTTGGCTGCACAAGGAATTATTCCAGTCTGGAAGGACTAA

Protein sequence

MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD*

Homology

[Close]

BLAST of Cucsa.282620 vs. TrEMBL
Match: A0A0A0KUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614630 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 2.3e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60

Query: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120
           EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180
           LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE
Sbjct: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 194

[Close]

BLAST of Cucsa.282620 vs. TrEMBL
Match: F6H8E9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s2377g00010 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 5.3e-63
Identity = 124/199 (62.31%), Postives = 156/199 (78.39%), Query Frame = 1


Query: 9   RGIGVST---ATYFPHNPKPS----PLF-----SLHMMVHKLAAERKVICCSTLQESSTP 68
           R IGVS+   ++YF    + +    PL       +H M  K    R++I CS +QESSTP
Sbjct: 4   RAIGVSSFPSSSYFTRKSEATSSTLPLCLRHGQCMHQMAGKPVTSRRIIACSAVQESSTP 63

Query: 69  TVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSF 128
           TVAAE KE+K   ++ PAK KPPAKAPVKPLP++M+E+VIPSLK+ILEAQ D+S++ LSF
Sbjct: 64  TVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQMMEEDVIPSLKSILEAQDDLSEIELSF 123

Query: 129 QDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLI 188
           QD+RL+GSF K G+PYSFWAFFPNG LTGPKGFSLSSYG+G S+VEPFL+DEK+++ K +
Sbjct: 124 QDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFSLSSYGSGSSTVEPFLIDEKRITAKHV 183

Query: 189 VFWIEKRLAAQGIIPVWKD 195
           VFW+EKRLAAQGIIPVWK+
Sbjct: 184 VFWVEKRLAAQGIIPVWKE 202

[Close]

BLAST of Cucsa.282620 vs. TrEMBL
Match: A0A067E764_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029104mg PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.6e-59
Identity = 126/200 (63.00%), Postives = 153/200 (76.50%), Query Frame = 1


Query: 3   MILKGGRGIGVST---ATYFPHNPKP-SPLFSLHMMVHKLAAERKVICCSTLQESSTPTV 62
           M + GGR +GVS+   ++YF  N K  S  F L M     AA R  I CS +QE+ST  V
Sbjct: 1   MSILGGRAVGVSSFPSSSYFSRNVKSTSSAFPLQMACTS-AALRGCIACSAVQETSTSAV 60

Query: 63  AAEPKEIKTVPKEAPAKAKPPA---KAPVKPLPELMDEEVIPSLKAILEAQADVSDVALS 122
           AAE KE K V KEAPAK KPPA   KAP KPLPELM+E+VIPSLKAILEAQ D+S++ L 
Sbjct: 61  AAETKEAKPVEKEAPAKPKPPARAPKAPAKPLPELMEEDVIPSLKAILEAQDDLSNIELC 120

Query: 123 FQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKL 182
           F+D++L+GSF+K G  YSFWAFFPNG L GPKGFSLSSYG+G S+VEPFL+DEKK++ + 
Sbjct: 121 FKDNKLEGSFMKKGNNYSFWAFFPNGILAGPKGFSLSSYGSGASTVEPFLIDEKKITARH 180

Query: 183 IVFWIEKRLAAQGIIPVWKD 195
           +VFW+EKRLAAQGI+PVWK+
Sbjct: 181 VVFWVEKRLAAQGILPVWKE 199

[Close]

BLAST of Cucsa.282620 vs. TrEMBL
Match: V4W521_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016771mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.7e-59
Identity = 125/200 (62.50%), Postives = 152/200 (76.00%), Query Frame = 1


Query: 3   MILKGGRGIGVST---ATYFPHNPKP-SPLFSLHMMVHKLAAERKVICCSTLQESSTPTV 62
           M + GGR +GVS+   ++YF  N K  S  F L M     AA R  I CS +QE+ST  V
Sbjct: 1   MSILGGRAVGVSSFPSSSYFSRNVKSTSSAFPLQMACTS-AALRGCIACSAVQETSTSAV 60

Query: 63  AAEPKEIKTVPKEAPAKAKPPA---KAPVKPLPELMDEEVIPSLKAILEAQADVSDVALS 122
           AAE KE K V KEAP K KPPA   KAP KPLPELM+E+VIPSLKAILEAQ D+S++ L 
Sbjct: 61  AAETKEAKPVEKEAPTKPKPPARAPKAPAKPLPELMEEDVIPSLKAILEAQDDLSNIELC 120

Query: 123 FQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKL 182
           F+D++L+GSF+K G  YSFWAFFPNG L GPKGFSLSSYG+G S+VEPFL+DEKK++ + 
Sbjct: 121 FKDNKLEGSFMKKGNNYSFWAFFPNGILAGPKGFSLSSYGSGASTVEPFLIDEKKITARH 180

Query: 183 IVFWIEKRLAAQGIIPVWKD 195
           +VFW+EKRLAAQGI+PVWK+
Sbjct: 181 VVFWVEKRLAAQGILPVWKE 199

[Close]

BLAST of Cucsa.282620 vs. TrEMBL
Match: A5ATF4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015578 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.0e-58
Identity = 123/217 (56.68%), Postives = 155/217 (71.43%), Query Frame = 1


Query: 9   RGIGVST---ATYFPHNPKPS----PLF-----SLHMMVHKLAAERKVICCSTLQESSTP 68
           R IGVS+   ++YF    + +    PL       +H M  K    R++I CS +QESSTP
Sbjct: 4   RAIGVSSFPSSSYFTRKSEATSSTLPLCLRHGQCMHQMAGKPVTSRRIIACSAVQESSTP 63

Query: 69  T------------------VAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPS 128
           T                  VAAE KE+K   ++ PAK KPPAKAPVKPLP++M+E+VIPS
Sbjct: 64  TDEWKGLDWSSMYSTCFYLVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQMMEEDVIPS 123

Query: 129 LKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGG 188
           LK+ILEAQ D+S++ LSFQD+RL+GSF K G+PYSFWAFF NG LTGPKGFSLSSYG+G 
Sbjct: 124 LKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFXNGVLTGPKGFSLSSYGSGS 183

Query: 189 SSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 195
           S+VEPFL+DEK+++ K +VFW+EKRLAAQGIIPVWK+
Sbjct: 184 STVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 220

[Close]

BLAST of Cucsa.282620 vs. TAIR10
Match: AT2G04039.3 (AT2G04039.3 unknown protein)

HSP 1 Score: 104.4 bits (259), Expect = 8.2e-23
Identity = 61/103 (59.22%), Postives = 72/103 (69.90%), Query Frame = 1


Query: 50  LQESSTPTVAAEPK-----EIKTVPKEAPAKAKPPAKAPV--KPLPELMDEEVIPSLKAI 109
           LQESST  VA E K     E  TV   A  K KP AKA    KPL ++M+E+VIP L+AI
Sbjct: 48  LQESSTSAVATEKKNKEEGEESTVAVPAK-KPKPAAKAAAVAKPLRQMMEEDVIPPLQAI 107

Query: 110 LEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTG 145
           LE+Q D+SD+ LSFQDD+L+G FLK  +PYSFWAFFP G LTG
Sbjct: 108 LESQDDISDIDLSFQDDKLEGFFLKKSIPYSFWAFFPTGNLTG 149

[Close]

BLAST of Cucsa.282620 vs. NCBI nr
Match: gi|449434508|ref|XP_004135038.1| (PREDICTED: uncharacterized protein LOC101205552 [Cucumis sativus])

HSP 1 Score: 392.9 bits (1008), Expect = 3.3e-106
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60
           MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA
Sbjct: 1   MAMILKGGRGIGVSTATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVAA 60

Query: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120
           EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR
Sbjct: 61  EPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDDR 120

Query: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180
           LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE
Sbjct: 121 LDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWIE 180

Query: 181 KRLAAQGIIPVWKD 195
           KRLAAQGIIPVWKD
Sbjct: 181 KRLAAQGIIPVWKD 194

[Close]

BLAST of Cucsa.282620 vs. NCBI nr
Match: gi|659091830|ref|XP_008446754.1| (PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo])

HSP 1 Score: 374.0 bits (959), Expect = 1.6e-100
Identity = 186/195 (95.38%), Postives = 190/195 (97.44%), Query Frame = 1


Query: 1   MAMILKGGRGIGVSTATYFP-HNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA 60
           MAMILKGGRG+GVSTATYFP HNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA
Sbjct: 1   MAMILKGGRGLGVSTATYFPAHNPKPSPLFSLHMMVHKLAAERKVICCSTLQESSTPTVA 60

Query: 61  AEPKEIKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAILEAQADVSDVALSFQDD 120
           AEPKEIKTVPKEAPAKAKPPAKA VKPLPELM+EEVIPSLKAILEAQADV D+ LSFQDD
Sbjct: 61  AEPKEIKTVPKEAPAKAKPPAKAAVKPLPELMEEEVIPSLKAILEAQADVYDIELSFQDD 120

Query: 121 RLDGSFLKNGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSGKLIVFWI 180
           RLDGSFLK+GVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVS KLIVFWI
Sbjct: 121 RLDGSFLKDGVPYSFWAFFPNGLTGPKGFSLSSYGNGGSSVEPFLVDEKKVSAKLIVFWI 180

Query: 181 EKRLAAQGIIPVWKD 195
           EKRLAAQGIIPVWKD
Sbjct: 181 EKRLAAQGIIPVWKD 195

[Close]

BLAST of Cucsa.282620 vs. NCBI nr
Match: gi|296083572|emb|CBI23563.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 248.4 bits (633), Expect = 1.0e-62
Identity = 115/165 (69.70%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 31  LHMMVHKLAAERKVICCSTLQESSTPTVAAEPKEIKTVPKEAPAKAKPPAKAPVKPLPEL 90
           +H M  K    R++I CS +QESSTPTVAAE KE+K   ++ PAK KPPAKAPVKPLP++
Sbjct: 1   MHQMAGKPVTSRRIIACSAVQESSTPTVAAETKEVKPAQEKGPAKPKPPAKAPVKPLPQM 60

Query: 91  MDEEVIPSLKAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFS 150
           M+E+VIPSLK+ILEAQ D+S++ LSFQD+RL+GSF K G+PYSFWAFFPNG LTGPKGFS
Sbjct: 61  MEEDVIPSLKSILEAQDDLSEIELSFQDNRLEGSFQKKGIPYSFWAFFPNGVLTGPKGFS 120

Query: 151 LSSYGNGGSSVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 195
           LSSYG+G S+VEPFL+DEK+++ K +VFW+EKRLAAQGIIPVWK+
Sbjct: 121 LSSYGSGSSTVEPFLIDEKRITAKHVVFWVEKRLAAQGIIPVWKE 165

[Close]

BLAST of Cucsa.282620 vs. NCBI nr
Match: gi|1009125591|ref|XP_015879692.1| (PREDICTED: uncharacterized protein LOC107415808 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 248.4 bits (633), Expect = 1.0e-62
Identity = 130/216 (60.19%), Postives = 160/216 (74.07%), Query Frame = 1


Query: 1   MAMILK---GGRGIGVST-------ATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTL 60
           MAM+L+   GG G+GVS+       ++YF HN KP+   SL   +H L   R+ I C  +
Sbjct: 3   MAMMLRCGHGGGGVGVSSFPSSSSSSSYFTHNSKPT---SLSSSIHMLVTRRRNIACFAV 62

Query: 61  QESSTPTVAAEPKEI-----------KTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSL 120
           QESS  TVAA+ KE            KT PK +PAK K PAKAP KPLP++M+E+VIPSL
Sbjct: 63  QESSIKTVAADTKEAEAKAKEAEATAKTAPKASPAKPKAPAKAPAKPLPQMMEEDVIPSL 122

Query: 121 KAILEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGS 180
           ++ILEAQ D+S++ LSFQD+RL+GSFLK G  YSFWAFFPNG LTGPKGFSLSSYG+G S
Sbjct: 123 RSILEAQQDISELELSFQDNRLEGSFLKKGNAYSFWAFFPNGVLTGPKGFSLSSYGSGAS 182

Query: 181 SVEPFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 195
           +VEPFL+DEKK++ K +VFW+EKRLAAQGIIPVWKD
Sbjct: 183 TVEPFLIDEKKITAKHVVFWVEKRLAAQGIIPVWKD 215

[Close]

BLAST of Cucsa.282620 vs. NCBI nr
Match: gi|1009125593|ref|XP_015879693.1| (PREDICTED: uncharacterized protein LOC107415808 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 242.3 bits (617), Expect = 7.2e-61
Identity = 129/213 (60.56%), Postives = 158/213 (74.18%), Query Frame = 1


Query: 1   MAMILK---GGRGIGVST-------ATYFPHNPKPSPLFSLHMMVHKLAAERKVICCSTL 60
           MAM+L+   GG G+GVS+       ++YF HN KP+   SL   +H L   R+ I C  +
Sbjct: 3   MAMMLRCGHGGGGVGVSSFPSSSSSSSYFTHNSKPT---SLSSSIHMLVTRRRNIACFAV 62

Query: 61  QESS--TPTVAAEPKE------IKTVPKEAPAKAKPPAKAPVKPLPELMDEEVIPSLKAI 120
           QESS  T T  AE K        KT PK +PAK K PAKAP KPLP++M+E+VIPSL++I
Sbjct: 63  QESSIKTDTKEAEAKAKEAEATAKTAPKASPAKPKAPAKAPAKPLPQMMEEDVIPSLRSI 122

Query: 121 LEAQADVSDVALSFQDDRLDGSFLKNGVPYSFWAFFPNG-LTGPKGFSLSSYGNGGSSVE 180
           LEAQ D+S++ LSFQD+RL+GSFLK G  YSFWAFFPNG LTGPKGFSLSSYG+G S+VE
Sbjct: 123 LEAQQDISELELSFQDNRLEGSFLKKGNAYSFWAFFPNGVLTGPKGFSLSSYGSGASTVE 182

Query: 181 PFLVDEKKVSGKLIVFWIEKRLAAQGIIPVWKD 195
           PFL+DEKK++ K +VFW+EKRLAAQGIIPVWKD
Sbjct: 183 PFLIDEKKITAKHVVFWVEKRLAAQGIIPVWKD 212

The following BLAST results are available for this feature:

BLAST of Cucsa.282620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUS0_CUCSA	2.3e-106	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G614630 PE=4 SV=1	[more]
F6H8E9_VITVI	5.3e-63	62.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s2377g00010 PE=4 SV=...	[more]
A0A067E764_CITSI	1.6e-59	63.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029104mg PE=4 SV=1	[more]
V4W521_9ROSI	4.7e-59	62.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016771mg PE=4 SV=1	[more]
A5ATF4_VITVI	1.0e-58	56.68	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015578 PE=4 SV=1	[more]

BLAST of Cucsa.282620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G04039.3	8.2e-23	59.22	unknown protein	[more]

BLAST of Cucsa.282620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449434508\|ref\|XP_004135038.1\|	3.3e-106	100.00	PREDICTED: uncharacterized protein LOC101205552 [Cucumis sativus]	[more]
gi\|659091830\|ref\|XP_008446754.1\|	1.6e-100	95.38	PREDICTED: uncharacterized protein LOC103489386 [Cucumis melo]	[more]
gi\|296083572\|emb\|CBI23563.3\|	1.0e-62	69.70	unnamed protein product [Vitis vinifera]	[more]
gi\|1009125591\|ref\|XP_015879692.1\|	1.0e-62	60.19	PREDICTED: uncharacterized protein LOC107415808 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009125593\|ref\|XP_015879693.1\|	7.2e-61	60.56	PREDICTED: uncharacterized protein LOC107415808 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021374	DUF2996

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.282620.1	Cucsa.282620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021374	Protein of unknown function DUF2996	PFAM	PF11210	DUF2996	coord: 85..187 score: 6.1
None	No IPR available	PANTHER	PTHR36341	FAMILY NOT NAMED	coord: 31..194 score: 4.2
None	No IPR available	PANTHER	PTHR36341:SF2	SUBFAMILY NOT NAMED	coord: 31..194 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.282620	Cla020487	Watermelon (97103) v1	cgywmB524
Cucsa.282620	Csa5G614630	Cucumber (Chinese Long) v2	cgycuB410
Cucsa.282620	MELO3C012348	Melon (DHL92) v3.5.1	cgymeB474
Cucsa.282620	ClCG05G021810	Watermelon (Charleston Gray)	cgywcgB498
Cucsa.282620	CSPI05G26320	Wild cucumber (PI 183967)	cgycpiB432
Cucsa.282620	CmaCh04G014370	Cucurbita maxima (Rimu)	cgycmaB0801
Cucsa.282620	CmoCh04G015080	Cucurbita moschata (Rifu)	cgycmoB0793
Cucsa.282620	Lsi04G001530	Bottle gourd (USVL1VR-Ls)	cgylsiB465
Cucsa.282620	MELO3C012348.2	Melon (DHL92) v3.6.1	cgymedB471
Cucsa.282620	CsaV3_5G035360	Cucumber (Chinese Long) v3	cgycucB441
Cucsa.282620	Cla97C05G103520	Watermelon (97103) v2	cgywmbB498
Cucsa.282620	Bhi07G000633	Wax gourd	cgywgoB583
Cucsa.282620	Carg01900	Silver-seed gourd	carcgyB0968

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.282620	Silver-seed gourd	carcgyB1166
Cucsa.282620	Cucurbita maxima (Rimu)	cgycmaB0797
Cucsa.282620	Cucurbita moschata (Rifu)	cgycmoB0789
Cucsa.282620	Cucurbita pepo (Zucchini)	cgycpeB0745
Cucsa.282620	Cucurbita pepo (Zucchini)	cgycpeB0750